Query 040341
Match_columns 251
No_of_seqs 177 out of 1159
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 11:53:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040341.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040341hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otr_A Enolase; structural gen 100.0 6.2E-87 2.1E-91 629.9 22.7 249 1-249 197-445 (452)
2 3qtp_A Enolase 1; glycolysis, 100.0 2.1E-84 7.1E-89 612.3 24.3 247 1-249 193-441 (441)
3 2al1_A Enolase 1, 2-phospho-D- 100.0 7.1E-69 2.4E-73 509.9 21.9 244 1-248 191-434 (436)
4 3tqp_A Enolase; energy metabol 100.0 8.3E-68 2.8E-72 501.3 24.5 232 1-244 189-422 (428)
5 3qn3_A Enolase; structural gen 100.0 6.1E-68 2.1E-72 500.7 21.4 228 1-243 189-416 (417)
6 2akz_A Gamma enolase, neural; 100.0 1.4E-67 4.8E-72 501.5 22.2 243 1-248 189-431 (439)
7 3uj2_A Enolase 1; enzyme funct 100.0 2.7E-66 9.1E-71 493.4 24.0 235 1-243 211-447 (449)
8 2ptz_A Enolase; lyase, glycoly 100.0 1.1E-62 3.9E-67 467.0 23.3 241 1-244 191-431 (432)
9 2fym_A Enolase; RNA degradosom 100.0 2.5E-56 8.7E-61 423.1 24.4 238 1-248 190-431 (431)
10 1w6t_A Enolase; bacterial infe 100.0 1.9E-54 6.5E-59 411.7 21.9 242 1-246 197-441 (444)
11 2pa6_A Enolase; glycolysis, ly 100.0 1.7E-52 5.7E-57 396.3 23.4 234 2-248 194-427 (427)
12 1kko_A 3-methylaspartate ammon 100.0 1E-31 3.4E-36 253.2 12.6 199 30-234 180-410 (413)
13 1kcz_A Beta-methylaspartase; b 100.0 2.3E-31 7.8E-36 250.5 10.5 198 30-234 180-410 (413)
14 2pge_A MENC; OSBS, NYSGXRC, PS 99.9 2E-23 6.9E-28 194.0 14.2 173 28-213 160-344 (377)
15 1wue_A Mandelate racemase/muco 99.9 8E-22 2.7E-26 183.7 16.0 169 30-214 161-336 (386)
16 1wuf_A Hypothetical protein LI 99.9 1.8E-21 6.1E-26 181.9 16.4 169 30-214 161-336 (393)
17 1tkk_A Similar to chloromucona 99.9 1.3E-21 4.4E-26 180.7 14.7 170 27-210 137-318 (366)
18 3jva_A Dipeptide epimerase; en 99.9 2.8E-21 9.4E-26 178.3 16.0 178 24-214 133-319 (354)
19 1r0m_A N-acylamino acid racema 99.9 3.6E-21 1.2E-25 178.3 15.3 159 29-203 147-312 (375)
20 2p8b_A Mandelate racemase/muco 99.9 3.2E-21 1.1E-25 178.2 14.4 170 27-210 138-317 (369)
21 2zc8_A N-acylamino acid racema 99.9 4.2E-21 1.4E-25 177.4 15.1 159 29-203 140-305 (369)
22 1nu5_A Chloromuconate cycloiso 99.9 2.7E-21 9.1E-26 178.8 12.7 173 28-210 140-319 (370)
23 1sjd_A N-acylamino acid racema 99.8 1.3E-20 4.6E-25 174.0 15.9 160 29-203 140-306 (368)
24 2ozt_A TLR1174 protein; struct 99.8 5.4E-21 1.9E-25 175.0 12.3 161 28-205 114-291 (332)
25 3cyj_A Mandelate racemase/muco 99.8 1.8E-20 6.2E-25 173.7 14.8 157 31-205 145-311 (372)
26 3bjs_A Mandelate racemase/muco 99.8 1.2E-20 4.2E-25 178.2 13.9 164 28-206 182-358 (428)
27 2ps2_A Putative mandelate race 99.8 2.1E-20 7.1E-25 173.0 15.1 167 28-207 144-316 (371)
28 2gdq_A YITF; mandelate racemas 99.8 1.6E-20 5.5E-25 174.7 13.9 165 29-208 135-313 (382)
29 2zad_A Muconate cycloisomerase 99.8 2.3E-20 7.9E-25 171.1 14.6 168 28-207 137-311 (345)
30 2pp0_A L-talarate/galactarate 99.8 2.2E-20 7.4E-25 174.8 13.2 159 30-206 175-343 (398)
31 2poz_A Putative dehydratase; o 99.8 2.9E-20 9.9E-25 173.3 13.6 168 24-206 131-325 (392)
32 1rvk_A Isomerase/lactonizing e 99.8 4.4E-20 1.5E-24 171.3 14.8 162 28-206 147-324 (382)
33 3q45_A Mandelate racemase/muco 99.8 5.8E-20 2E-24 170.3 15.2 171 25-209 135-314 (368)
34 3ik4_A Mandelate racemase/muco 99.8 6.7E-20 2.3E-24 169.8 15.0 162 27-204 140-313 (365)
35 3qld_A Mandelate racemase/muco 99.8 9E-20 3.1E-24 170.3 16.0 169 30-214 149-324 (388)
36 3p3b_A Mandelate racemase/muco 99.8 6.5E-20 2.2E-24 171.2 15.0 161 32-208 150-331 (392)
37 2qgy_A Enolase from the enviro 99.8 1.2E-19 4.2E-24 169.2 16.1 164 28-206 147-321 (391)
38 2p3z_A L-rhamnonate dehydratas 99.8 4.5E-20 1.5E-24 174.0 13.2 118 80-205 228-345 (415)
39 2pgw_A Muconate cycloisomerase 99.8 2.3E-19 7.8E-24 166.8 16.5 166 29-205 146-316 (384)
40 3s5s_A Mandelate racemase/muco 99.8 1E-19 3.4E-24 170.1 14.1 162 27-204 141-314 (389)
41 2qde_A Mandelate racemase/muco 99.8 1.3E-19 4.4E-24 169.3 14.8 165 29-207 144-317 (397)
42 3i4k_A Muconate lactonizing en 99.8 1.9E-19 6.4E-24 167.8 15.8 169 27-208 145-323 (383)
43 2rdx_A Mandelate racemase/muco 99.8 2.2E-19 7.6E-24 166.6 16.3 166 29-208 144-315 (379)
44 3dgb_A Muconate cycloisomerase 99.8 1.1E-19 3.7E-24 169.4 13.9 169 28-209 146-324 (382)
45 2hzg_A Mandelate racemase/muco 99.8 1.3E-19 4.4E-24 169.5 14.0 166 28-205 143-321 (401)
46 2ox4_A Putative mandelate race 99.8 8.2E-20 2.8E-24 170.7 12.3 165 30-206 146-335 (403)
47 2o56_A Putative mandelate race 99.8 6.3E-20 2.2E-24 171.7 11.2 165 30-206 152-341 (407)
48 2qq6_A Mandelate racemase/muco 99.8 8.3E-20 2.8E-24 171.2 11.9 162 30-206 149-336 (410)
49 3ro6_B Putative chloromuconate 99.8 1.1E-19 3.9E-24 167.6 12.5 167 27-207 137-313 (356)
50 1mdl_A Mandelate racemase; iso 99.8 1.2E-19 4E-24 167.1 12.4 160 29-206 143-312 (359)
51 3fcp_A L-Ala-D/L-Glu epimerase 99.8 1.1E-19 3.7E-24 169.3 12.2 167 28-207 145-321 (381)
52 3mwc_A Mandelate racemase/muco 99.8 4E-19 1.4E-23 166.6 16.1 172 31-217 164-342 (400)
53 2nql_A AGR_PAT_674P, isomerase 99.8 1.9E-19 6.5E-24 167.7 13.6 163 29-206 163-334 (388)
54 3u9i_A Mandelate racemase/muco 99.8 1.8E-19 6.3E-24 168.6 13.1 163 27-205 162-344 (393)
55 3i6e_A Muconate cycloisomerase 99.8 3.2E-19 1.1E-23 166.4 14.7 167 28-209 146-322 (385)
56 4hnl_A Mandelate racemase/muco 99.8 1.3E-19 4.3E-24 170.7 11.9 163 29-204 152-347 (421)
57 2qdd_A Mandelate racemase/muco 99.8 1.3E-19 4.4E-24 168.2 11.8 163 29-206 144-313 (378)
58 4dye_A Isomerase; enolase fami 99.8 3E-19 1E-23 167.4 14.2 161 30-206 168-337 (398)
59 1chr_A Chloromuconate cycloiso 99.8 5E-19 1.7E-23 164.0 14.8 168 28-208 140-317 (370)
60 2ovl_A Putative racemase; stru 99.8 5.2E-19 1.8E-23 163.7 14.8 157 30-204 146-312 (371)
61 1jpd_X L-Ala-D/L-Glu epimerase 99.8 6.8E-20 2.3E-24 167.0 8.7 161 27-206 129-296 (324)
62 2gl5_A Putative dehydratase pr 99.8 2E-19 6.7E-24 168.5 11.4 165 30-206 150-344 (410)
63 2og9_A Mandelate racemase/muco 99.8 5.8E-19 2E-23 164.7 13.7 159 30-206 162-330 (393)
64 3r0u_A Enzyme of enolase super 99.8 1.4E-18 4.7E-23 161.9 16.1 162 28-203 140-312 (379)
65 3my9_A Muconate cycloisomerase 99.8 6.4E-19 2.2E-23 163.7 13.1 167 28-208 144-320 (377)
66 3ijl_A Muconate cycloisomerase 99.8 8.7E-19 3E-23 160.8 12.9 170 24-209 128-302 (338)
67 3fv9_G Mandelate racemase/muco 99.8 2.8E-18 9.4E-23 160.1 15.5 163 28-207 143-320 (386)
68 3ozy_A Putative mandelate race 99.8 2.1E-18 7.1E-23 161.0 14.4 161 28-203 149-319 (389)
69 1tzz_A Hypothetical protein L1 99.8 8.4E-19 2.9E-23 163.5 11.7 158 30-205 165-339 (392)
70 3gd6_A Muconate cycloisomerase 99.8 2.2E-18 7.6E-23 161.0 14.2 164 28-207 140-315 (391)
71 4dwd_A Mandelate racemase/muco 99.8 2.8E-18 9.6E-23 160.5 14.8 164 28-207 137-317 (393)
72 3eez_A Putative mandelate race 99.8 4.8E-18 1.7E-22 158.0 15.8 165 28-206 143-313 (378)
73 4hpn_A Putative uncharacterize 99.8 2.9E-18 1E-22 158.9 13.8 166 27-207 141-317 (378)
74 3tj4_A Mandelate racemase; eno 99.8 3.8E-18 1.3E-22 158.3 14.4 160 30-205 151-321 (372)
75 4e8g_A Enolase, mandelate race 99.8 6.4E-18 2.2E-22 158.0 15.9 162 27-205 161-335 (391)
76 3sbf_A Mandelate racemase / mu 99.8 3.3E-18 1.1E-22 160.3 13.7 164 28-204 131-327 (401)
77 3toy_A Mandelate racemase/muco 99.8 3.2E-18 1.1E-22 159.6 13.2 159 28-204 165-334 (383)
78 3sjn_A Mandelate racemase/muco 99.8 2.5E-18 8.6E-23 159.6 11.7 161 29-204 145-318 (374)
79 3dg3_A Muconate cycloisomerase 99.8 4.9E-18 1.7E-22 157.2 13.2 163 27-203 136-308 (367)
80 2chr_A Chloromuconate cycloiso 99.8 1.1E-17 3.7E-22 154.6 14.8 168 29-209 141-318 (370)
81 3v3w_A Starvation sensing prot 99.7 5.5E-18 1.9E-22 160.0 12.7 163 29-204 148-352 (424)
82 4e5t_A Mandelate racemase / mu 99.7 8.3E-18 2.8E-22 157.8 13.7 164 27-205 148-333 (404)
83 3t6c_A RSPA, putative MAND fam 99.7 8.2E-18 2.8E-22 159.6 13.5 165 27-204 152-366 (440)
84 3r4e_A Mandelate racemase/muco 99.7 5.8E-18 2E-22 159.5 12.3 163 29-204 142-346 (418)
85 2hxt_A L-fuconate dehydratase; 99.7 8.8E-18 3E-22 159.0 13.5 147 30-189 198-353 (441)
86 1r6w_A OSB synthase, O-succiny 99.7 2.1E-18 7.1E-23 157.1 8.7 156 28-204 113-283 (322)
87 3tji_A Mandelate racemase/muco 99.7 6.7E-18 2.3E-22 159.4 12.4 164 28-204 152-348 (422)
88 3vcn_A Mannonate dehydratase; 99.7 6.3E-18 2.2E-22 159.6 12.0 163 29-204 149-353 (425)
89 4e4u_A Mandalate racemase/muco 99.7 1.2E-17 4.3E-22 157.0 13.5 163 28-205 142-326 (412)
90 3ugv_A Enolase; enzyme functio 99.7 9.6E-18 3.3E-22 156.7 12.1 147 29-188 170-329 (390)
91 3vc5_A Mandelate racemase/muco 99.7 2.1E-17 7.3E-22 156.8 14.5 158 28-202 186-353 (441)
92 3rr1_A GALD, putative D-galact 99.7 2E-17 6.8E-22 155.4 14.0 163 28-206 123-304 (405)
93 3ddm_A Putative mandelate race 99.7 1.3E-17 4.6E-22 155.8 12.7 158 31-203 156-323 (392)
94 3stp_A Galactonate dehydratase 99.7 1.6E-17 5.4E-22 156.4 13.2 159 29-205 178-352 (412)
95 2oz8_A MLL7089 protein; struct 99.7 4.4E-17 1.5E-21 151.8 16.0 158 30-205 145-311 (389)
96 3mkc_A Racemase; metabolic pro 99.7 1.4E-17 4.9E-22 155.6 12.7 157 33-204 160-330 (394)
97 3rcy_A Mandelate racemase/muco 99.7 1.6E-17 5.4E-22 157.3 12.9 163 29-206 145-329 (433)
98 3vdg_A Probable glucarate dehy 99.7 2.7E-17 9.2E-22 156.3 14.3 158 28-202 191-358 (445)
99 3va8_A Probable dehydratase; e 99.7 2.6E-17 8.7E-22 156.5 14.0 158 28-202 189-356 (445)
100 3mqt_A Mandelate racemase/muco 99.7 2.2E-17 7.4E-22 154.4 13.3 157 33-204 155-325 (394)
101 3tcs_A Racemase, putative; PSI 99.7 2.3E-17 7.9E-22 154.2 13.3 161 30-204 146-325 (388)
102 4e4f_A Mannonate dehydratase; 99.7 1.7E-17 5.8E-22 156.8 10.3 163 29-204 148-354 (426)
103 4a35_A Mitochondrial enolase s 99.7 9.9E-17 3.4E-21 152.2 15.4 148 30-189 201-358 (441)
104 3go2_A Putative L-alanine-DL-g 99.7 1.2E-16 4.2E-21 150.0 14.7 161 26-204 139-334 (409)
105 4h1z_A Enolase Q92ZS5; dehydra 99.7 1.3E-16 4.4E-21 150.0 14.8 166 28-208 186-360 (412)
106 3dip_A Enolase; structural gen 99.7 6.7E-17 2.3E-21 151.9 12.4 155 34-204 160-337 (410)
107 2okt_A OSB synthetase, O-succi 99.7 3.6E-17 1.2E-21 150.0 9.2 150 39-206 135-290 (342)
108 4dxk_A Mandelate racemase / mu 99.7 6.8E-17 2.3E-21 151.4 11.0 155 35-204 157-334 (400)
109 2opj_A O-succinylbenzoate-COA 99.7 8.9E-17 3E-21 147.0 11.2 159 27-207 77-247 (327)
110 3mzn_A Glucarate dehydratase; 99.7 1.7E-16 5.9E-21 150.9 13.0 161 28-204 180-356 (450)
111 3pfr_A Mandelate racemase/muco 99.7 2.3E-16 7.7E-21 150.3 12.5 161 28-204 183-359 (455)
112 3p0w_A Mandelate racemase/muco 99.7 2.7E-16 9.2E-21 150.4 12.8 161 28-204 198-374 (470)
113 3v5c_A Mandelate racemase/muco 99.7 5E-16 1.7E-20 145.2 13.7 157 31-204 149-327 (392)
114 4h2h_A Mandelate racemase/muco 99.7 8.2E-16 2.8E-20 142.7 13.6 161 26-202 146-316 (376)
115 3ekg_A Mandelate racemase/muco 99.7 7.9E-16 2.7E-20 144.6 13.2 148 43-205 171-334 (404)
116 4h83_A Mandelate racemase/muco 99.6 1.5E-15 5E-20 141.7 14.0 158 30-205 164-332 (388)
117 3fxg_A Rhamnonate dehydratase; 99.6 2.3E-15 7.8E-20 143.3 11.3 147 43-205 177-339 (455)
118 4gfi_A Mandelate racemase/muco 99.6 4.6E-15 1.6E-19 135.2 9.6 164 26-210 128-298 (329)
119 4g8t_A Glucarate dehydratase; 99.5 3.5E-14 1.2E-18 135.4 12.7 158 29-202 201-372 (464)
120 3caw_A O-succinylbenzoate synt 99.5 4.1E-14 1.4E-18 129.0 7.6 149 29-204 111-268 (330)
121 1zco_A 2-dehydro-3-deoxyphosph 96.1 0.088 3E-06 46.2 12.5 134 27-188 32-166 (262)
122 1vr6_A Phospho-2-dehydro-3-deo 96.0 0.096 3.3E-06 47.9 12.9 132 28-187 116-248 (350)
123 1vs1_A 3-deoxy-7-phosphoheptul 95.9 0.11 3.6E-06 46.1 12.3 135 27-189 47-182 (276)
124 3nvt_A 3-deoxy-D-arabino-heptu 95.2 0.14 4.7E-06 47.5 11.0 133 28-188 152-285 (385)
125 1o60_A 2-dehydro-3-deoxyphosph 95.2 0.37 1.3E-05 42.9 13.2 94 88-189 75-169 (292)
126 2qkf_A 3-deoxy-D-manno-octulos 94.7 0.63 2.1E-05 41.1 13.5 95 88-190 72-167 (280)
127 1ydn_A Hydroxymethylglutaryl-C 94.6 0.15 5.2E-06 44.9 9.3 127 83-216 21-179 (295)
128 2wqp_A Polysialic acid capsule 94.5 0.43 1.5E-05 43.6 12.1 143 28-187 31-181 (349)
129 3noy_A 4-hydroxy-3-methylbut-2 94.2 0.19 6.6E-06 46.0 9.0 132 85-234 43-176 (366)
130 1vli_A Spore coat polysacchari 93.9 0.59 2E-05 43.2 11.9 141 28-187 40-192 (385)
131 3tml_A 2-dehydro-3-deoxyphosph 93.8 0.47 1.6E-05 42.2 10.7 94 88-189 74-174 (288)
132 3sz8_A 2-dehydro-3-deoxyphosph 91.7 1.9 6.6E-05 38.2 11.6 94 88-189 77-171 (285)
133 2nwr_A 2-dehydro-3-deoxyphosph 91.1 3.8 0.00013 35.8 12.8 95 87-189 60-155 (267)
134 3eeg_A 2-isopropylmalate synth 91.0 0.95 3.3E-05 40.6 9.0 141 83-227 23-186 (325)
135 3g8r_A Probable spore coat pol 89.9 2.5 8.6E-05 38.5 10.8 140 29-185 18-166 (350)
136 4e38_A Keto-hydroxyglutarate-a 88.6 0.94 3.2E-05 39.0 6.6 110 85-211 43-153 (232)
137 1nvm_A HOA, 4-hydroxy-2-oxoval 88.3 3.9 0.00013 36.7 10.9 131 82-216 24-173 (345)
138 3tsm_A IGPS, indole-3-glycerol 88.2 4.1 0.00014 35.7 10.7 114 84-209 78-193 (272)
139 3ivs_A Homocitrate synthase, m 88.1 2.9 9.9E-05 39.0 10.2 128 82-214 55-202 (423)
140 2l69_A Rossmann 2X3 fold prote 87.7 2.6 8.8E-05 31.6 7.6 76 28-135 8-84 (134)
141 3qja_A IGPS, indole-3-glycerol 87.4 1.8 6.2E-05 37.9 7.9 117 84-212 71-189 (272)
142 2ztj_A Homocitrate synthase; ( 87.3 3.9 0.00013 37.4 10.4 124 82-211 19-163 (382)
143 3hgj_A Chromate reductase; TIM 87.0 4.4 0.00015 36.4 10.4 70 85-158 236-317 (349)
144 3rmj_A 2-isopropylmalate synth 86.7 1.6 5.4E-05 40.0 7.3 141 83-227 29-192 (370)
145 3fs2_A 2-dehydro-3-deoxyphosph 86.3 1.5 5.3E-05 39.1 6.8 94 88-189 98-192 (298)
146 1ydo_A HMG-COA lyase; TIM-barr 86.2 3.5 0.00012 36.6 9.2 129 82-216 22-181 (307)
147 3lab_A Putative KDPG (2-keto-3 85.5 1.4 4.6E-05 37.6 5.8 111 84-211 21-138 (217)
148 2cw6_A Hydroxymethylglutaryl-C 84.7 4.8 0.00016 35.3 9.3 129 82-216 21-180 (298)
149 1i4n_A Indole-3-glycerol phosp 84.7 4.4 0.00015 35.1 8.9 101 84-191 60-161 (251)
150 1wa3_A 2-keto-3-deoxy-6-phosph 84.7 3.5 0.00012 33.5 8.0 111 85-211 19-130 (205)
151 2ftp_A Hydroxymethylglutaryl-C 83.4 3.6 0.00012 36.2 7.9 129 82-216 24-183 (302)
152 1z41_A YQJM, probable NADH-dep 83.2 12 0.00039 33.4 11.3 71 84-158 225-306 (338)
153 3kru_A NADH:flavin oxidoreduct 81.9 9.3 0.00032 34.4 10.2 69 85-158 227-306 (343)
154 3ble_A Citramalate synthase fr 81.3 3.3 0.00011 37.1 7.0 126 83-214 36-191 (337)
155 3t7v_A Methylornithine synthas 80.2 3.7 0.00013 36.4 6.8 113 84-201 90-224 (350)
156 3ewb_X 2-isopropylmalate synth 78.1 5.4 0.00018 35.1 7.2 131 82-217 21-175 (293)
157 4g9p_A 4-hydroxy-3-methylbut-2 77.4 3.5 0.00012 38.3 5.8 107 88-197 38-154 (406)
158 1rqb_A Transcarboxylase 5S sub 76.4 9 0.00031 36.8 8.7 129 84-216 43-199 (539)
159 1vc4_A Indole-3-glycerol phosp 75.3 12 0.00042 32.0 8.5 96 85-188 65-162 (254)
160 1pii_A N-(5'phosphoribosyl)ant 73.5 7.9 0.00027 36.4 7.3 101 84-192 67-169 (452)
161 2v82_A 2-dehydro-3-deoxy-6-pho 73.0 27 0.00092 28.3 9.8 111 85-211 16-127 (212)
162 2q5c_A NTRC family transcripti 69.8 25 0.00084 28.8 8.8 106 91-212 62-169 (196)
163 3kcn_A Adenylate cyclase homol 69.2 28 0.00095 25.7 8.5 82 86-172 35-119 (151)
164 3l5l_A Xenobiotic reductase A; 68.9 9.9 0.00034 34.3 6.7 70 85-158 243-324 (363)
165 3dxi_A Putative aldolase; TIM 68.9 62 0.0021 28.7 12.5 142 83-227 19-178 (320)
166 3hv2_A Response regulator/HD d 68.8 33 0.0011 25.4 9.2 81 86-172 46-129 (153)
167 3tdn_A FLR symmetric alpha-bet 67.2 12 0.00042 31.3 6.6 93 50-158 8-107 (247)
168 2rjn_A Response regulator rece 67.1 26 0.0009 25.9 8.0 82 86-173 39-123 (154)
169 3iix_A Biotin synthetase, puta 66.3 34 0.0012 29.7 9.6 110 84-198 83-212 (348)
170 2nx9_A Oxaloacetate decarboxyl 65.3 55 0.0019 30.7 11.2 129 84-216 26-182 (464)
171 1xrs_B D-lysine 5,6-aminomutas 64.0 72 0.0024 27.6 17.1 180 23-221 37-249 (262)
172 2xhz_A KDSD, YRBH, arabinose 5 63.2 16 0.00054 28.7 6.2 54 153-206 96-149 (183)
173 3fxa_A SIS domain protein; str 62.8 4.5 0.00015 32.7 2.9 53 154-206 93-145 (201)
174 1n8f_A DAHP synthetase; (beta/ 62.3 91 0.0031 28.2 12.3 137 27-178 62-205 (350)
175 1vzw_A Phosphoribosyl isomeras 61.4 67 0.0023 26.4 11.0 40 116-159 65-104 (244)
176 3aty_A Tcoye, prostaglandin F2 58.7 39 0.0013 30.6 8.7 68 85-158 263-335 (379)
177 3hzh_A Chemotaxis response reg 58.3 54 0.0018 24.3 8.7 81 86-171 69-152 (157)
178 3nft_A Translocator protein BI 57.6 12 0.00041 33.1 4.7 120 10-149 103-233 (303)
179 4a29_A Engineered retro-aldol 56.9 44 0.0015 29.0 8.2 96 85-189 64-162 (258)
180 3igs_A N-acetylmannosamine-6-p 56.7 36 0.0012 28.6 7.6 113 84-209 32-153 (232)
181 3gr7_A NADPH dehydrogenase; fl 56.3 88 0.003 27.7 10.5 70 85-158 226-306 (340)
182 3q58_A N-acetylmannosamine-6-p 56.2 41 0.0014 28.2 7.9 113 84-209 32-153 (229)
183 4e7p_A Response regulator; DNA 55.3 58 0.002 23.8 8.3 82 86-177 54-138 (150)
184 3jte_A Response regulator rece 55.3 55 0.0019 23.5 9.3 83 86-173 35-120 (143)
185 3eul_A Possible nitrate/nitrit 55.1 59 0.002 23.8 9.3 78 86-170 49-129 (152)
186 3f6c_A Positive transcription 55.1 51 0.0017 23.3 7.4 78 87-171 35-115 (134)
187 3heb_A Response regulator rece 54.5 60 0.0021 23.7 9.0 69 101-173 60-132 (152)
188 1tqx_A D-ribulose-5-phosphate 54.4 38 0.0013 28.5 7.4 45 153-198 86-131 (227)
189 3hdg_A Uncharacterized protein 53.4 58 0.002 23.2 8.9 82 86-174 39-123 (137)
190 1wbh_A KHG/KDPG aldolase; lyas 52.9 24 0.00082 29.3 5.8 110 85-211 25-135 (214)
191 2c6q_A GMP reductase 2; TIM ba 52.8 1.1E+02 0.0036 27.4 10.5 117 91-215 120-255 (351)
192 1vhc_A Putative KHG/KDPG aldol 52.7 56 0.0019 27.3 8.2 110 85-211 26-136 (224)
193 3knz_A Putative sugar binding 52.7 13 0.00043 33.6 4.3 56 152-207 96-151 (366)
194 1vzw_A Phosphoribosyl isomeras 52.4 54 0.0018 27.0 8.0 43 113-158 177-221 (244)
195 3g68_A Putative phosphosugar i 51.7 13 0.00046 33.1 4.3 54 153-206 82-135 (352)
196 1ccw_A Protein (glutamate muta 51.6 44 0.0015 25.5 6.8 88 123-213 28-121 (137)
197 2y88_A Phosphoribosyl isomeras 51.2 95 0.0033 25.3 9.4 40 116-159 64-103 (244)
198 3ilh_A Two component response 50.5 66 0.0023 23.0 9.6 83 86-171 43-134 (146)
199 3kht_A Response regulator; PSI 50.2 65 0.0022 23.2 7.4 81 86-172 39-124 (144)
200 3f7j_A YVGN protein; aldo-keto 50.1 1.2E+02 0.004 25.7 10.4 144 29-187 28-190 (276)
201 3f4w_A Putative hexulose 6 pho 50.1 81 0.0028 25.2 8.6 120 86-212 11-134 (211)
202 3eod_A Protein HNR; response r 49.6 55 0.0019 23.1 6.8 81 86-172 39-122 (130)
203 3b3d_A YTBE protein, putative 48.6 99 0.0034 26.8 9.4 142 28-188 61-229 (314)
204 1mxs_A KDPG aldolase; 2-keto-3 48.0 26 0.00088 29.5 5.2 110 85-211 35-145 (225)
205 3nmy_A Xometc, cystathionine g 48.0 39 0.0013 30.3 6.8 117 89-210 93-216 (400)
206 1ps9_A 2,4-dienoyl-COA reducta 47.6 32 0.0011 33.2 6.5 71 84-158 224-309 (671)
207 3usb_A Inosine-5'-monophosphat 47.5 1.2E+02 0.0043 28.4 10.5 117 91-214 258-390 (511)
208 1icp_A OPR1, 12-oxophytodienoa 47.5 38 0.0013 30.6 6.7 69 85-158 253-329 (376)
209 1vyr_A Pentaerythritol tetrani 46.8 44 0.0015 30.0 6.9 68 86-158 249-322 (364)
210 3h7i_A Ribonuclease H, RNAse H 46.6 8.5 0.00029 34.4 2.0 93 35-135 48-155 (305)
211 3eua_A Putative fructose-amino 46.4 15 0.00051 32.5 3.6 50 153-202 74-123 (329)
212 3sho_A Transcriptional regulat 46.3 1E+02 0.0034 23.9 9.6 54 153-206 87-140 (187)
213 3of5_A Dethiobiotin synthetase 46.2 64 0.0022 26.7 7.5 73 83-183 92-171 (228)
214 3e9k_A Kynureninase; kynurenin 46.1 54 0.0018 29.4 7.5 123 87-209 137-278 (465)
215 3hba_A Putative phosphosugar i 46.0 16 0.00055 32.4 3.8 55 153-207 90-144 (334)
216 3fj1_A Putative phosphosugar i 45.7 14 0.00048 32.9 3.4 55 153-207 91-145 (344)
217 2pju_A Propionate catabolism o 45.5 66 0.0023 27.0 7.5 125 91-233 74-198 (225)
218 3f9t_A TDC, L-tyrosine decarbo 45.2 51 0.0018 28.1 6.9 84 102-189 124-210 (397)
219 3fcs_B Integrin beta-3; beta p 44.7 99 0.0034 30.4 9.5 34 27-60 215-255 (690)
220 3b3e_A YVGN protein; aldo-keto 44.5 1.6E+02 0.0054 25.6 11.4 143 29-188 62-225 (310)
221 3s83_A Ggdef family protein; s 44.1 1.2E+02 0.004 25.0 8.9 125 88-220 105-248 (259)
222 3fkj_A Putative phosphosugar i 43.7 14 0.00048 33.0 3.1 54 153-206 89-142 (347)
223 2qv5_A AGR_C_5032P, uncharacte 43.6 1.6E+02 0.0054 25.3 10.7 119 22-192 101-223 (261)
224 2r6o_A Putative diguanylate cy 43.3 1.4E+02 0.0049 25.5 9.6 120 87-219 128-271 (294)
225 1t3i_A Probable cysteine desul 43.2 1.2E+02 0.004 26.2 9.1 102 87-189 99-208 (420)
226 3lmz_A Putative sugar isomeras 43.1 1.3E+02 0.0046 24.4 9.1 41 85-129 30-77 (257)
227 3tqv_A Nicotinate-nucleotide p 42.8 65 0.0022 28.3 7.2 93 126-225 133-237 (287)
228 3txv_A Probable tagatose 6-pho 42.2 37 0.0013 31.8 5.7 98 134-234 190-311 (450)
229 3sbx_A Putative uncharacterize 42.1 19 0.00064 29.7 3.4 44 144-187 100-145 (189)
230 1x1o_A Nicotinate-nucleotide p 41.6 37 0.0013 29.7 5.4 86 126-216 130-227 (286)
231 3qua_A Putative uncharacterize 41.5 19 0.00066 29.9 3.4 44 144-187 109-154 (199)
232 1y80_A Predicted cobalamin bin 41.0 1.4E+02 0.0048 24.0 9.1 147 31-189 16-180 (210)
233 3hdv_A Response regulator; PSI 40.8 94 0.0032 22.0 8.2 81 86-171 39-122 (136)
234 4gqr_A Pancreatic alpha-amylas 40.7 20 0.00068 32.4 3.6 31 161-191 71-105 (496)
235 3pzs_A PM kinase, pyridoxamine 40.6 1.5E+02 0.005 25.1 9.1 101 84-185 56-182 (289)
236 3bfj_A 1,3-propanediol oxidore 40.5 97 0.0033 27.6 8.2 72 123-194 29-106 (387)
237 3l8a_A METC, putative aminotra 39.2 1.5E+02 0.0051 26.0 9.2 152 25-188 70-235 (421)
238 3ri6_A O-acetylhomoserine sulf 38.9 53 0.0018 29.8 6.3 112 94-210 114-231 (430)
239 1kmj_A Selenocysteine lyase; p 38.7 91 0.0031 26.7 7.6 102 87-189 94-203 (406)
240 2qv0_A Protein MRKE; structura 38.7 1.1E+02 0.0036 21.9 7.7 80 86-174 43-125 (143)
241 4gmf_A Yersiniabactin biosynth 38.4 50 0.0017 29.7 5.9 43 142-188 85-127 (372)
242 3cnb_A DNA-binding response re 38.2 1E+02 0.0036 21.7 9.1 83 86-177 42-128 (143)
243 2jk1_A HUPR, hydrogenase trans 38.0 1.1E+02 0.0037 21.8 7.3 81 86-172 32-115 (139)
244 3qxc_A Dethiobiotin synthetase 38.0 1E+02 0.0034 25.9 7.5 71 84-182 115-191 (242)
245 1olt_A Oxygen-independent copr 37.9 90 0.0031 28.6 7.7 49 160-209 182-237 (457)
246 1cs1_A CGS, protein (cystathio 37.7 1.7E+02 0.0057 25.3 9.2 96 89-189 78-176 (386)
247 3ffs_A Inosine-5-monophosphate 37.6 67 0.0023 29.5 6.7 113 93-213 148-276 (400)
248 1w8s_A FBP aldolase, fructose- 37.3 30 0.001 29.6 4.1 77 142-219 96-186 (263)
249 1ka9_F Imidazole glycerol phos 37.0 67 0.0023 26.4 6.2 41 114-158 63-103 (252)
250 3l0g_A Nicotinate-nucleotide p 36.8 56 0.0019 28.9 5.8 94 116-215 127-237 (300)
251 1r30_A Biotin synthase; SAM ra 36.4 73 0.0025 28.1 6.7 113 83-201 97-230 (369)
252 2qxy_A Response regulator; reg 36.2 1.2E+02 0.0039 21.6 7.0 77 86-172 36-117 (142)
253 3ndn_A O-succinylhomoserine su 36.1 1.2E+02 0.004 27.2 8.1 105 102-211 121-231 (414)
254 2po3_A 4-dehydrase; external a 35.9 1.1E+02 0.0036 27.0 7.7 147 25-190 25-175 (424)
255 2gou_A Oxidoreductase, FMN-bin 35.9 2.1E+02 0.007 25.5 9.6 69 85-158 247-321 (365)
256 1rrm_A Lactaldehyde reductase; 35.7 73 0.0025 28.4 6.6 72 123-194 27-102 (386)
257 4fo4_A Inosine 5'-monophosphat 35.1 96 0.0033 28.0 7.2 90 118-214 140-242 (366)
258 3fgn_A Dethiobiotin synthetase 34.9 62 0.0021 27.5 5.7 51 84-135 110-166 (251)
259 3cz5_A Two-component response 34.8 1.3E+02 0.0044 21.8 9.1 81 86-172 39-121 (153)
260 3dzz_A Putative pyridoxal 5'-p 34.6 2.1E+02 0.0072 24.2 10.8 152 25-188 36-201 (391)
261 2aeu_A Hypothetical protein MJ 34.3 2.3E+02 0.0078 24.5 10.7 94 88-191 86-183 (374)
262 1a76_A Flap endonuclease-1 pro 34.3 34 0.0012 30.2 4.0 109 89-221 130-238 (326)
263 3gt7_A Sensor protein; structu 34.3 1.4E+02 0.0046 21.9 7.4 81 86-172 39-123 (154)
264 1b5p_A Protein (aspartate amin 34.1 1.7E+02 0.0058 25.1 8.6 100 87-191 100-208 (385)
265 3nra_A Aspartate aminotransfer 34.0 1.8E+02 0.006 24.9 8.7 98 87-188 111-220 (407)
266 2xbl_A Phosphoheptose isomeras 33.9 37 0.0013 26.8 3.9 49 154-202 117-165 (198)
267 2r14_A Morphinone reductase; H 33.5 1.8E+02 0.0062 26.1 8.9 69 85-158 252-327 (377)
268 3tb6_A Arabinose metabolism tr 33.4 79 0.0027 25.8 6.1 40 150-189 69-108 (298)
269 2lmc_A Bacterial RNA polymeras 32.9 23 0.00077 25.3 2.0 39 17-55 40-81 (84)
270 2nly_A BH1492 protein, diverge 32.8 2.3E+02 0.0078 24.0 13.0 119 22-191 74-196 (245)
271 3kki_A CAI-1 autoinducer synth 32.8 2E+02 0.0067 24.9 8.9 88 93-188 135-224 (409)
272 3tbf_A Glucosamine--fructose-6 32.6 21 0.0007 32.2 2.3 54 153-206 101-155 (372)
273 3a10_A Response regulator; pho 32.4 87 0.003 21.4 5.4 78 86-171 33-112 (116)
274 3fdb_A Beta C-S lyase, putativ 32.1 2.3E+02 0.0078 23.9 13.0 149 26-188 33-191 (377)
275 3bc8_A O-phosphoseryl-tRNA(SEC 32.1 33 0.0011 32.0 3.7 57 134-190 177-238 (450)
276 3i42_A Response regulator rece 32.0 91 0.0031 21.7 5.5 79 86-171 35-117 (127)
277 3grc_A Sensor protein, kinase; 31.6 1.4E+02 0.0047 21.2 7.2 78 86-170 38-121 (140)
278 3qhx_A Cystathionine gamma-syn 31.3 1E+02 0.0035 27.1 6.8 105 102-211 106-216 (392)
279 2jwk_A Protein TOLR; periplasm 31.2 1E+02 0.0035 20.2 5.3 32 151-182 43-74 (74)
280 2zj3_A Glucosamine--fructose-6 31.2 35 0.0012 30.6 3.6 53 153-205 107-159 (375)
281 2qjg_A Putative aldolase MJ040 31.2 85 0.0029 26.3 5.9 78 141-219 102-193 (273)
282 1o69_A Aminotransferase; struc 31.2 1.3E+02 0.0043 26.2 7.3 98 87-189 56-158 (394)
283 3mad_A Sphingosine-1-phosphate 31.1 1.3E+02 0.0043 27.5 7.6 97 87-188 169-277 (514)
284 2nli_A Lactate oxidase; flavoe 31.1 54 0.0019 29.5 4.9 28 29-58 143-170 (368)
285 2poc_A D-fructose-6- PH, isome 31.0 35 0.0012 30.4 3.6 52 153-204 97-148 (367)
286 2aml_A SIS domain protein; 469 31.0 39 0.0014 30.2 3.9 54 153-206 97-151 (373)
287 1ydh_A AT5G11950; structural g 30.8 32 0.0011 28.8 3.1 44 144-187 97-142 (216)
288 3lfj_A Manxb, phosphotransfera 30.8 21 0.00072 29.5 1.9 45 81-126 139-183 (187)
289 2kk6_A Proto-oncogene tyrosine 30.7 25 0.00084 26.3 2.1 40 67-115 70-115 (116)
290 3glc_A Aldolase LSRF; TIM barr 30.3 47 0.0016 29.2 4.2 70 144-214 131-211 (295)
291 2rfv_A Methionine gamma-lyase; 30.3 70 0.0024 28.0 5.4 116 89-209 90-212 (398)
292 3g13_A Putative conjugative tr 30.2 1.6E+02 0.0054 22.7 7.0 82 84-188 22-113 (169)
293 1tk9_A Phosphoheptose isomeras 30.0 30 0.001 27.1 2.7 49 154-202 111-159 (188)
294 1ibj_A CBL, cystathionine beta 29.9 77 0.0026 29.1 5.8 81 103-188 173-255 (464)
295 2nzl_A Hydroxyacid oxidase 1; 29.9 67 0.0023 29.2 5.3 29 29-59 157-185 (392)
296 3bgw_A DNAB-like replicative h 29.9 1.5E+02 0.0052 27.1 7.8 102 85-187 235-358 (444)
297 3cai_A Possible aminotransfera 29.8 1.1E+02 0.0037 26.4 6.6 102 87-189 95-204 (406)
298 3o63_A Probable thiamine-phosp 29.4 2.5E+02 0.0086 23.5 8.9 37 168-213 84-120 (243)
299 1wek_A Hypothetical protein TT 29.3 45 0.0015 27.9 3.7 43 144-186 123-168 (217)
300 1v77_A PH1877P, hypothetical p 29.2 34 0.0011 28.2 2.9 100 86-194 63-174 (212)
301 2b7n_A Probable nicotinate-nuc 29.2 1.1E+02 0.0039 26.2 6.4 96 126-227 116-223 (273)
302 3i16_A Aluminum resistance pro 29.1 1.8E+02 0.006 26.5 8.1 74 138-211 161-248 (427)
303 1m3s_A Hypothetical protein YC 29.0 43 0.0015 26.2 3.5 53 154-206 80-132 (186)
304 1ht6_A AMY1, alpha-amylase iso 29.0 42 0.0014 30.2 3.7 33 160-192 62-98 (405)
305 3fvv_A Uncharacterized protein 28.8 1.3E+02 0.0044 23.5 6.4 58 111-183 157-220 (232)
306 1qkk_A DCTD, C4-dicarboxylate 28.7 1.3E+02 0.0043 21.9 6.0 68 101-172 48-117 (155)
307 2ctz_A O-acetyl-L-homoserine s 28.6 71 0.0024 28.5 5.3 118 89-210 84-209 (421)
308 1b43_A Protein (FEN-1); nuclea 28.5 56 0.0019 28.9 4.4 110 88-221 129-250 (340)
309 4avf_A Inosine-5'-monophosphat 28.5 3.3E+02 0.011 25.2 10.0 117 91-214 231-363 (490)
310 3m9w_A D-xylose-binding peripl 28.5 2E+02 0.0067 23.8 7.8 81 106-190 12-93 (313)
311 2w6r_A Imidazole glycerol phos 28.4 1E+02 0.0035 25.5 6.0 54 169-222 158-217 (266)
312 2qr3_A Two-component system re 28.2 1.6E+02 0.0053 20.7 7.4 79 86-170 35-120 (140)
313 1wyu_B Glycine dehydrogenase s 28.2 52 0.0018 29.9 4.3 78 103-185 158-238 (474)
314 3ox4_A Alcohol dehydrogenase 2 28.0 1.1E+02 0.0037 27.5 6.4 71 124-194 28-102 (383)
315 3jzl_A Putative cystathionine 27.9 1.5E+02 0.005 26.7 7.3 73 137-210 145-230 (409)
316 3lua_A Response regulator rece 27.8 1.2E+02 0.0041 21.6 5.6 33 139-172 91-123 (140)
317 1weh_A Conserved hypothetical 27.5 33 0.0011 27.5 2.5 35 145-179 90-124 (171)
318 1ypf_A GMP reductase; GUAC, pu 27.3 2.3E+02 0.008 24.7 8.4 93 113-213 135-240 (336)
319 1x92_A APC5045, phosphoheptose 27.3 39 0.0013 26.8 3.0 50 154-203 114-166 (199)
320 2a3n_A Putative glucosamine-fr 27.3 40 0.0014 29.8 3.3 36 153-188 102-137 (355)
321 3cog_A Cystathionine gamma-lya 27.3 88 0.003 27.7 5.6 117 89-210 93-216 (403)
322 1dbw_A Transcriptional regulat 27.2 1.6E+02 0.0054 20.4 7.3 31 140-171 86-116 (126)
323 1qgn_A Protein (cystathionine 27.2 1.9E+02 0.0064 26.3 7.9 118 89-210 140-264 (445)
324 4gie_A Prostaglandin F synthas 27.1 2.9E+02 0.0098 23.4 9.9 141 30-189 36-199 (290)
325 3n53_A Response regulator rece 27.0 58 0.002 23.3 3.7 82 86-173 34-119 (140)
326 2gkg_A Response regulator homo 27.0 1.5E+02 0.0052 20.2 6.8 79 86-171 37-120 (127)
327 3r64_A NAD dependent benzaldeh 26.9 38 0.0013 31.8 3.2 71 147-220 170-244 (508)
328 3jtx_A Aminotransferase; NP_28 26.9 1.1E+02 0.0036 26.4 5.9 99 86-189 99-210 (396)
329 1o2d_A Alcohol dehydrogenase, 26.8 1.4E+02 0.0048 26.5 6.9 71 122-192 36-110 (371)
330 1vim_A Hypothetical protein AF 26.8 45 0.0015 26.8 3.2 53 154-206 90-142 (200)
331 2yw3_A 4-hydroxy-2-oxoglutarat 26.7 1.1E+02 0.0037 25.0 5.7 108 86-211 23-130 (207)
332 1k66_A Phytochrome response re 26.7 1.7E+02 0.0058 20.6 7.5 70 100-173 62-135 (149)
333 3bh0_A DNAB-like replicative h 26.6 3E+02 0.01 23.5 9.3 102 85-187 106-229 (315)
334 3ecd_A Serine hydroxymethyltra 26.4 1.7E+02 0.0058 25.2 7.3 93 94-187 111-207 (425)
335 3odp_A Putative tagatose-6-pho 26.3 41 0.0014 30.6 3.2 48 152-199 107-156 (393)
336 3uhj_A Probable glycerol dehyd 26.2 76 0.0026 28.7 5.0 30 164-193 90-119 (387)
337 2ekg_A Proline dehydrogenase/d 26.1 3E+02 0.01 24.3 8.8 83 86-187 60-154 (327)
338 3cfy_A Putative LUXO repressor 26.1 1.8E+02 0.0061 20.7 9.1 80 86-172 36-118 (137)
339 1tzb_A Glucose-6-phosphate iso 26.0 1.7E+02 0.0058 25.0 7.0 33 153-185 79-111 (302)
340 1elu_A L-cysteine/L-cystine C- 25.9 1.3E+02 0.0045 25.5 6.3 101 86-187 84-195 (390)
341 3r0j_A Possible two component 25.8 2.6E+02 0.0087 22.4 8.9 81 86-173 55-138 (250)
342 2dr1_A PH1308 protein, 386AA l 25.8 1.7E+02 0.0057 24.8 7.0 102 86-189 79-185 (386)
343 1j32_A Aspartate aminotransfer 25.8 2.8E+02 0.0096 23.5 8.5 97 87-188 99-204 (388)
344 2h9a_A Carbon monoxide dehydro 25.8 94 0.0032 28.9 5.6 76 103-188 130-208 (445)
345 1rcu_A Conserved hypothetical 25.8 64 0.0022 26.5 4.0 39 145-187 111-149 (195)
346 3tcm_A Alanine aminotransferas 25.8 2.2E+02 0.0076 25.9 8.2 98 87-188 166-278 (500)
347 1x52_A Pelota homolog, CGI-17; 25.7 83 0.0028 23.8 4.4 53 135-187 37-94 (124)
348 2z67_A O-phosphoseryl-tRNA(SEC 25.6 1.1E+02 0.0038 27.5 6.1 71 118-188 189-269 (456)
349 1ud2_A Amylase, alpha-amylase; 25.6 48 0.0016 30.4 3.6 25 161-185 75-99 (480)
350 1moq_A Glucosamine 6-phosphate 25.5 38 0.0013 30.1 2.7 53 153-205 99-152 (368)
351 1svd_M Ribulose bisphosphate c 25.5 2.1E+02 0.0073 21.4 6.7 68 23-102 17-84 (110)
352 1wpc_A Glucan 1,4-alpha-maltoh 25.4 48 0.0017 30.4 3.6 25 161-185 77-101 (485)
353 3gbx_A Serine hydroxymethyltra 25.4 85 0.0029 27.1 5.0 98 89-188 103-205 (420)
354 1vlj_A NADH-dependent butanol 25.2 1.5E+02 0.0053 26.6 6.9 70 123-192 39-113 (407)
355 1g94_A Alpha-amylase; beta-alp 25.2 49 0.0017 30.1 3.5 32 161-192 59-94 (448)
356 3up8_A Putative 2,5-diketo-D-g 25.1 3.2E+02 0.011 23.3 9.5 144 31-189 46-209 (298)
357 3l5a_A NADH/flavin oxidoreduct 25.0 2E+02 0.0067 26.3 7.6 70 85-158 261-345 (419)
358 1mxg_A Alpha amylase; hyperthe 25.0 52 0.0018 30.0 3.6 31 161-191 81-115 (435)
359 3bh4_A Alpha-amylase; calcium, 25.0 50 0.0017 30.3 3.6 25 161-185 73-97 (483)
360 2g0t_A Conserved hypothetical 25.0 1.5E+02 0.0052 26.6 6.6 70 144-214 82-153 (350)
361 1rbl_M Ribulose 1,5 bisphospha 24.9 2.1E+02 0.007 21.4 6.3 68 23-102 15-82 (109)
362 2jbm_A Nicotinate-nucleotide p 24.8 81 0.0028 27.6 4.7 93 129-227 134-238 (299)
363 1j5x_A Glucosamine-6-phosphate 24.5 46 0.0016 29.3 3.1 51 155-205 102-152 (342)
364 2i2x_B MTAC, methyltransferase 24.4 2.5E+02 0.0084 23.5 7.7 84 103-189 126-213 (258)
365 2wme_A BADH, betaine aldehyde 24.3 39 0.0013 31.7 2.7 70 147-220 164-237 (490)
366 3ju7_A Putative PLP-dependent 24.3 1.3E+02 0.0045 26.3 6.1 147 25-188 9-163 (377)
367 3a2b_A Serine palmitoyltransfe 24.1 3.3E+02 0.011 23.2 9.4 95 87-189 112-212 (398)
368 2zay_A Response regulator rece 24.0 2E+02 0.0067 20.4 8.5 82 86-173 40-125 (147)
369 1e5e_A MGL, methionine gamma-l 23.9 1.3E+02 0.0045 26.5 6.1 96 89-189 88-187 (404)
370 3tqk_A Phospho-2-dehydro-3-deo 23.8 4E+02 0.014 23.9 10.6 135 27-179 59-203 (346)
371 1jeo_A MJ1247, hypothetical pr 23.8 62 0.0021 25.1 3.5 52 154-206 83-134 (180)
372 2guy_A Alpha-amylase A; (beta- 23.8 54 0.0019 30.0 3.5 30 161-190 92-125 (478)
373 2x0s_A Pyruvate phosphate diki 23.6 2.2E+02 0.0074 29.0 8.2 67 103-172 818-893 (913)
374 2cb1_A O-acetyl homoserine sul 23.6 77 0.0026 28.0 4.5 116 88-209 81-204 (412)
375 2yva_A DNAA initiator-associat 23.5 46 0.0016 26.2 2.7 39 154-192 110-148 (196)
376 1hvx_A Alpha-amylase; hydrolas 23.5 56 0.0019 30.4 3.6 25 161-185 76-100 (515)
377 4dq6_A Putative pyridoxal phos 23.4 3.3E+02 0.011 22.9 9.7 96 87-188 99-205 (391)
378 3trj_A Phosphoheptose isomeras 23.4 61 0.0021 26.2 3.4 50 153-202 114-166 (201)
379 2y88_A Phosphoribosyl isomeras 23.3 1.3E+02 0.0043 24.5 5.5 43 113-158 180-224 (244)
380 1lwj_A 4-alpha-glucanotransfer 23.2 57 0.0019 29.5 3.5 32 161-192 64-99 (441)
381 3k6r_A Putative transferase PH 23.2 3.5E+02 0.012 23.1 8.5 98 25-132 151-254 (278)
382 3acz_A Methionine gamma-lyase; 23.2 1.1E+02 0.0039 26.7 5.5 117 89-210 85-208 (389)
383 1gc0_A Methionine gamma-lyase; 23.1 1E+02 0.0035 27.0 5.1 103 103-210 106-214 (398)
384 2yxb_A Coenzyme B12-dependent 22.8 2.7E+02 0.0091 21.6 11.1 111 111-228 29-144 (161)
385 1gcy_A Glucan 1,4-alpha-maltot 22.8 59 0.002 30.4 3.6 33 161-193 87-123 (527)
386 2vi8_A Serine hydroxymethyltra 22.8 57 0.0019 28.2 3.3 52 137-188 148-199 (405)
387 3iwp_A Copper homeostasis prot 22.8 88 0.003 27.5 4.5 74 140-213 48-132 (287)
388 2hsa_B 12-oxophytodienoate red 22.7 2.3E+02 0.0077 25.7 7.5 41 114-158 307-347 (402)
389 1svv_A Threonine aldolase; str 22.7 2.9E+02 0.0099 22.8 7.9 98 86-188 74-185 (359)
390 3tov_A Glycosyl transferase fa 22.7 3.7E+02 0.013 23.2 13.1 48 165-223 251-298 (349)
391 3hvy_A Cystathionine beta-lyas 22.6 4.2E+02 0.015 23.8 9.9 75 137-211 160-248 (427)
392 3gka_A N-ethylmaleimide reduct 22.6 2.2E+02 0.0074 25.5 7.3 67 87-158 249-315 (361)
393 3zrp_A Serine-pyruvate aminotr 22.4 1.8E+02 0.0062 24.5 6.5 100 87-188 63-165 (384)
394 2i2w_A Phosphoheptose isomeras 22.2 50 0.0017 26.7 2.7 50 154-203 132-181 (212)
395 3isl_A Purine catabolism prote 22.0 1.5E+02 0.0051 25.5 6.0 98 89-188 73-174 (416)
396 4ab4_A Xenobiotic reductase B; 22.0 2.2E+02 0.0076 25.4 7.2 65 87-158 241-307 (362)
397 1b9h_A AHBA synthase, protein 21.9 2.4E+02 0.0081 24.1 7.3 140 32-190 17-163 (388)
398 3o0k_A Aldo/keto reductase; ss 21.9 3.6E+02 0.012 22.8 9.3 143 30-189 48-213 (283)
399 3hq1_A 2-isopropylmalate synth 21.9 2.2E+02 0.0075 27.8 7.5 118 82-203 87-234 (644)
400 3nl6_A Thiamine biosynthetic b 21.8 4.1E+02 0.014 25.1 9.3 76 128-213 11-93 (540)
401 3cvj_A Putative phosphoheptose 21.8 75 0.0026 26.1 3.8 52 156-207 111-173 (243)
402 1kgs_A DRRD, DNA binding respo 21.7 2.7E+02 0.0094 21.5 7.1 81 86-173 34-117 (225)
403 8abp_A L-arabinose-binding pro 21.7 94 0.0032 25.6 4.4 78 107-188 13-90 (306)
404 3hut_A Putative branched-chain 21.6 3.5E+02 0.012 22.5 8.4 45 86-132 56-100 (358)
405 4aie_A Glucan 1,6-alpha-glucos 21.5 63 0.0022 29.7 3.5 24 162-185 75-98 (549)
406 3ed6_A Betaine aldehyde dehydr 21.5 43 0.0015 31.6 2.4 69 148-220 193-265 (520)
407 3kts_A Glycerol uptake operon 21.5 64 0.0022 26.6 3.1 34 155-188 56-90 (192)
408 3n0l_A Serine hydroxymethyltra 21.4 91 0.0031 27.0 4.4 97 89-187 98-199 (417)
409 1rwu_A Hypothetical UPF0250 pr 21.4 1.6E+02 0.0054 21.9 5.1 31 65-102 72-103 (109)
410 2z1k_A (NEO)pullulanase; hydro 21.4 64 0.0022 29.4 3.5 31 161-191 91-125 (475)
411 2aaa_A Alpha-amylase; glycosid 21.3 60 0.0021 29.8 3.3 30 161-190 92-125 (484)
412 1vl6_A Malate oxidoreductase; 21.3 89 0.003 28.6 4.4 95 86-189 120-225 (388)
413 3b2n_A Uncharacterized protein 21.3 2.2E+02 0.0074 20.0 9.3 79 86-171 37-118 (133)
414 3qan_A 1-pyrroline-5-carboxyla 21.2 57 0.0019 30.9 3.2 70 147-220 194-267 (538)
415 1gox_A (S)-2-hydroxy-acid oxid 21.1 91 0.0031 27.9 4.4 26 30-57 134-159 (370)
416 1js3_A DDC;, DOPA decarboxylas 21.1 1.4E+02 0.0047 26.9 5.7 83 104-190 185-275 (486)
417 2yrr_A Aminotransferase, class 20.9 2.5E+02 0.0086 23.1 7.0 100 87-189 61-163 (353)
418 3qk7_A Transcriptional regulat 20.9 2.1E+02 0.0074 23.4 6.6 68 115-188 29-96 (294)
419 4a1f_A DNAB helicase, replicat 20.8 3E+02 0.01 24.2 7.8 117 84-201 83-223 (338)
420 4f11_A Gamma-aminobutyric acid 20.8 1.8E+02 0.0061 25.4 6.3 57 128-188 182-242 (433)
421 4dad_A Putative pilus assembly 20.8 2.3E+02 0.0079 20.1 6.3 65 100-171 67-136 (146)
422 3civ_A Endo-beta-1,4-mannanase 20.7 1.6E+02 0.0054 26.1 5.9 21 165-185 95-115 (343)
423 1jq5_A Glycerol dehydrogenase; 20.7 1.5E+02 0.0052 26.1 5.8 21 167-187 73-93 (370)
424 3ffs_A Inosine-5-monophosphate 20.6 1.4E+02 0.0049 27.2 5.7 67 140-212 145-212 (400)
425 3p6l_A Sugar phosphate isomera 20.5 3.4E+02 0.011 21.8 7.8 75 111-191 61-139 (262)
426 4fxs_A Inosine-5'-monophosphat 20.4 4.6E+02 0.016 24.3 9.3 117 91-214 233-365 (496)
427 3fok_A Uncharacterized protein 20.4 2.3E+02 0.0078 25.1 6.7 77 134-214 126-226 (307)
428 3jy6_A Transcriptional regulat 20.4 2.1E+02 0.0071 23.1 6.3 16 172-187 77-92 (276)
429 3ihj_A Alanine aminotransferas 20.3 4.8E+02 0.017 23.6 10.0 99 87-189 162-277 (498)
430 1wza_A Alpha-amylase A; hydrol 20.3 70 0.0024 29.3 3.5 31 162-192 77-111 (488)
431 3zxw_B Ribulose bisphosphate c 20.1 2.5E+02 0.0086 21.3 6.0 68 23-102 14-81 (118)
432 3lte_A Response regulator; str 20.0 2.2E+02 0.0077 19.6 8.5 80 86-171 38-120 (132)
No 1
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=6.2e-87 Score=629.93 Aligned_cols=249 Identities=58% Similarity=0.984 Sum_probs=241.6
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENND 80 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d 80 (251)
|+||++|++|||..+|+|||||||+|++++++|||++|++||+++||+++|.|||||||||||+.++|+|+++|++|++|
T Consensus 197 h~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~ 276 (452)
T 3otr_A 197 HHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKAAGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKN 276 (452)
T ss_dssp HHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHHHHTCTTTSEEEEECCGGGGEETTTTEEETTTTCSSCC
T ss_pred HHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccccchHhheeccCCeEEeeccCCCCc
Confidence 78999999999888999999999999999999999999999999999999999999999999976669999999988777
Q ss_pred CCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 81 GSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 81 ~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
.++.+|++||+++|++|+++|||++|||||+++||++|++|+++++++|||||||++|||+++++++|++++||+++||+
T Consensus 277 ~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKv 356 (452)
T 3otr_A 277 ASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKV 356 (452)
T ss_dssp GGGEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH
T ss_pred ccccccHHHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeec
Confidence 77889999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcccc
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~~~ 240 (251)
||+|||||+++++++|+++||.+|||||||||+|+||||||||++++|||+|+||||||++||||||||||||++.++|+
T Consensus 357 nQIGgITEalka~~lA~~~G~~vmvshrSGETeD~~iAdLaVgl~~gqIKtGap~rsER~aKyNqLlrIeeelg~~a~~~ 436 (452)
T 3otr_A 357 NQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDSFIADLVVGLRCGQIKSGSPCRSERLCKYNQLMRIEESLGADCVYA 436 (452)
T ss_dssp HHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEEC
T ss_pred cccccHHHHHHHHHHHHHcCCeEEEeCCCCCCchhHHHHHHHHcCCCccccCCCcchhHHHHHHHHHHHHHHhCccceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 040341 241 GTKFRAPVE 249 (251)
Q Consensus 241 ~~~~~~~~~ 249 (251)
|++||+|..
T Consensus 437 g~~~~~~~~ 445 (452)
T 3otr_A 437 GESFRHPKR 445 (452)
T ss_dssp GGGTTSCC-
T ss_pred ccccCCCcc
Confidence 999999963
No 2
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=100.00 E-value=2.1e-84 Score=612.27 Aligned_cols=247 Identities=60% Similarity=0.933 Sum_probs=239.1
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCC--C
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEE--N 78 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~--~ 78 (251)
|+||++|++|||..+|+|||||||+|++++++|||++|++||+++||+++|.|||||||||||++++|+|+++|++| +
T Consensus 193 h~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~f~~~~~~ 272 (441)
T 3qtp_A 193 QCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYTGKIEIAMDCAASEFYNEETKKYDLGKKIPADK 272 (441)
T ss_dssp HHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTTTEEETTTTSCGGG
T ss_pred HHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccchhHHHhhhccCCeEEeecCCcccc
Confidence 78999999999888999999999999999999999999999999999999999999999999997779999999876 4
Q ss_pred CCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 79 NDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 79 ~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+|+++.+|++||+++|++|+++|||++|||||+++||++|++|+++++ +|||||||++|||+++++++++.++||+++|
T Consensus 273 ~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg-~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI 351 (441)
T 3qtp_A 273 KDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHG-NFQIVGDDLLVTNPARVQMAMDKNACNSVLI 351 (441)
T ss_dssp CCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTT-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred cccccccCHHHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcC-CceEEeccccccCHHHHHHHHHcCCCCEEEe
Confidence 566678999999999999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred eccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcc
Q 040341 159 KVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAI 238 (251)
Q Consensus 159 K~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~ 238 (251)
|+||+||+||+++++++|+++||.+|||||||||+|+||||||||++++|||+|+||||||++||||||||||||++ ++
T Consensus 352 KvnqiGGITEalkaa~lA~~~G~~vmvsHrsgETeDt~iAdLAVal~~gqIKtGap~rseR~aKyNqLlrIeeelg~-a~ 430 (441)
T 3qtp_A 352 KVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFIADLVVGLNCKQIKTGAPCRSERLCKYNQLMRIEEELGN-IP 430 (441)
T ss_dssp CGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCEEEECCCSCSHHHHHHHHHHHHHHHHHSS-CC
T ss_pred cccccccHHHHHHHHHHHHHcCCeEEEeCCCCCccHhHHHHHHHHhCCCccccCCCcchhHHHHHHHHHHHHHHhCc-Ce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCccccCCCC
Q 040341 239 YAGTKFRAPVE 249 (251)
Q Consensus 239 ~~~~~~~~~~~ 249 (251)
|+|++||+|.+
T Consensus 431 ~~g~~~~~~~~ 441 (441)
T 3qtp_A 431 YAGKNWRNSTA 441 (441)
T ss_dssp BCTTCCBCCCC
T ss_pred ecccccccCCC
Confidence 99999999863
No 3
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=7.1e-69 Score=509.95 Aligned_cols=244 Identities=58% Similarity=0.891 Sum_probs=233.4
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENND 80 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d 80 (251)
|.||.+|+.|+|..+++|||||||+|++.+++++++.|.+|++++||+++|.+++|+|+|+||++ ++|+++|++++.|
T Consensus 191 ~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~g~v~l~vD~aase~~~n--~~y~~~~~~~~~~ 268 (436)
T 2al1_A 191 HNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFKD--GKYDLDFKNPNSD 268 (436)
T ss_dssp HHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEET--TEECTTTTCTTCC
T ss_pred HHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCCcceEEEEechhhhhccC--CceEEeccccccc
Confidence 57899999998766799999999999999999999999999999999877999999999999976 8999887766566
Q ss_pred CCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 81 GSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 81 ~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
+|+.+|++|++++|.+++++|||++|||||+++||++|++|+++. ++||||||+++||+.+++++++.++||+++||+
T Consensus 269 ~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~--~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv 346 (436)
T 2al1_A 269 KSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTA--GIQIVADDLTVTNPKRIATAIEKKAADALLLKV 346 (436)
T ss_dssp GGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTC--CSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred ccccCCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcC--CCeEEECCcccCCHHHHHHHHHhCCCCEEEech
Confidence 789999999999999999999999999999999999999999996 899999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcccc
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~~~ 240 (251)
||+||+||+++++++|+++||.+|+|||||||+|++|||||||++++|||+|+||||||++||||||||||+|++.++|+
T Consensus 347 ~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava~~~~~ik~G~~~r~er~~kyn~ll~ie~~l~~~~~~~ 426 (436)
T 2al1_A 347 NQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFA 426 (436)
T ss_dssp HHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCSEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEEC
T ss_pred hhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHHhcCCcCcCCCCccchHHHHHHHHHHHHHHhccccEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCC
Q 040341 241 GTKFRAPV 248 (251)
Q Consensus 241 ~~~~~~~~ 248 (251)
|+.||+|.
T Consensus 427 ~~~~~~~~ 434 (436)
T 2al1_A 427 GENFHHGD 434 (436)
T ss_dssp GGGCTTGG
T ss_pred ccccCCCC
Confidence 99999874
No 4
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=8.3e-68 Score=501.31 Aligned_cols=232 Identities=43% Similarity=0.730 Sum_probs=222.8
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCc-c-ceeeeeehhhhcccccCCcceeecCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYI-G-KIVIGMDVAASEFYDSKDKTYDLNFKEEN 78 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~-~-kI~iglD~Aase~~~~~~g~Y~l~~~~~~ 78 (251)
|+||.+|++|+ .+|+|||||||+|++++++++|++|.+||+++||+ + +|.|++|+||||||++ |+|+++
T Consensus 189 ~~lK~~l~~~g--~~t~vGdegg~ap~~~~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~--g~Y~l~----- 259 (428)
T 3tqp_A 189 HALKKRLVSRG--LMSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQN--GRYDFE----- 259 (428)
T ss_dssp HHHHHHHHHTT--CCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEET--TEECCS-----
T ss_pred HhHhhhhcccc--cccccCCCCCcCCCcccHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccC--Cceecc-----
Confidence 57899999884 78999999999999999999999999999999998 4 7999999999999987 899974
Q ss_pred CCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 79 NDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 79 ~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
|+.+|++|++++|++|+++|||++|||||+++||++|++|+++++.++||||||++|||+.+++++++.++||+++|
T Consensus 260 ---~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 260 ---NNQLTSEEMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp ---SSCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ---ccccCHHHHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 57899999999999989999999999999999999999999999888999999999999999999999999999999
Q ss_pred eccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcc
Q 040341 159 KVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAI 238 (251)
Q Consensus 159 K~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~ 238 (251)
|+||+||+||+++++++|+++||.+|||||||||+|+||||||||++++|||+|+||||||++||||||||||||++.++
T Consensus 337 Kv~~iGGiTealkia~lA~~~G~~~~v~H~sGEted~~iadLaVa~~~~~ik~G~p~r~er~akyn~llriee~l~~~~~ 416 (428)
T 3tqp_A 337 KLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDTTIADLAVATDARQIKTGSLCRSDRVAKYNRLLQIERELNDQAP 416 (428)
T ss_dssp CHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCEEEECCCSSSHHHHHHHHHHHHHHHHHTTSSC
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHcCCCcccCCCCcchhHHHHHhHHHHHHHHhCcccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccc
Q 040341 239 YAGTKF 244 (251)
Q Consensus 239 ~~~~~~ 244 (251)
|+|++.
T Consensus 417 ~~~~~~ 422 (428)
T 3tqp_A 417 YAGKEA 422 (428)
T ss_dssp BCGGGG
T ss_pred ecCccc
Confidence 999654
No 5
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=6.1e-68 Score=500.75 Aligned_cols=228 Identities=44% Similarity=0.720 Sum_probs=217.6
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENND 80 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d 80 (251)
|+||.+|++|+ .+|+|||||||+|++.++++++++|.+||+++||+++|.+++|++++|||++ |+|+++
T Consensus 189 ~~lK~~l~~kg--~~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy~~dv~l~vD~~ase~~~~--g~y~l~------- 257 (417)
T 3qn3_A 189 AILKKELANSG--HSTALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRVKIALDVASTEFFKD--GKYHME------- 257 (417)
T ss_dssp HHHHHHHHHTT--CCCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTCTTTEEEEEECCGGGGEET--TEEEET-------
T ss_pred HHHHHHHHhcC--cccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCCCCCceEEEECCchhhccC--CeeecC-------
Confidence 57899999884 6899999999999999999999999999999999999999999999999987 899985
Q ss_pred CCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 81 GSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 81 ~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
++.+|++|++++|++|+++|||++|||||+++||++|++|++++++++||||||+++||+++++++++.++||+++||+
T Consensus 258 -~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv 336 (417)
T 3qn3_A 258 -GKAFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKP 336 (417)
T ss_dssp -TEEECHHHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH
T ss_pred -CCccCHHHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecC
Confidence 3678999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcccc
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~~~ 240 (251)
||+||+||+++++++|+++||.+|||||||||+|+||||||||++++|||+|+||||||++||||||||||||++ |.
T Consensus 337 ~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt~d~~iadlava~~~~~ik~G~~~r~er~akyn~llriee~l~~---~~ 413 (417)
T 3qn3_A 337 NQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGERTAKYNRLLEIEFESDE---YL 413 (417)
T ss_dssp HHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCSEEECCCSCSHHHHHHHHHHHHHTTTCCE---EC
T ss_pred CCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhCCCccccCCCcchhHHHHHHHHHHHHHHhcc---cc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999973 55
Q ss_pred Ccc
Q 040341 241 GTK 243 (251)
Q Consensus 241 ~~~ 243 (251)
|.+
T Consensus 414 ~~~ 416 (417)
T 3qn3_A 414 GEK 416 (417)
T ss_dssp TTC
T ss_pred ccC
Confidence 543
No 6
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=1.4e-67 Score=501.47 Aligned_cols=243 Identities=68% Similarity=1.082 Sum_probs=232.2
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENND 80 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d 80 (251)
|.||.+|+.|+|..+++|||||||+|++++++++++.|.+|++++||+++|.|++|+|+++||++ ++|++.++.| .|
T Consensus 189 ~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~G~~g~v~l~vD~a~se~~~~--g~y~l~~~~~-~~ 265 (439)
T 2akz_A 189 HTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRD--GKYDLDFKSP-TD 265 (439)
T ss_dssp HHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEET--TEECTTTTSS-CC
T ss_pred HHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHcCCccceEEEEechHhhhccC--CeeEEecccc-cc
Confidence 57899999998877799999999999999999999999999999999877999999999999976 8999876655 46
Q ss_pred CCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 81 GSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 81 ~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
.|+.+|++|++++|.+++++|||++|||||+++||++|++|+++. ++||||||++|||+++++++++.++||+++||+
T Consensus 266 ~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~--~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv 343 (439)
T 2akz_A 266 PSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANV--GIQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 343 (439)
T ss_dssp GGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTC--SSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCC--CCEEEeCCCccCCHHHHHHHHHhCCCCEEEech
Confidence 688899999999999999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcccc
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~~~ 240 (251)
||+||+||+++++++|+++||.+|+||||+||+|++|||||||++++|||+|+||||||++||||||||||+|++++.|+
T Consensus 344 ~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~~~~ik~G~~~r~er~~kyn~llriee~l~~~~~~~ 423 (439)
T 2akz_A 344 NQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFA 423 (439)
T ss_dssp HHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCSEEECCCSCSHHHHHHHHHHHHHHHHHGGGCCBC
T ss_pred hhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhcCCcccCCCCccchhHHHHHHHHHHHHHhccCcEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCC
Q 040341 241 GTKFRAPV 248 (251)
Q Consensus 241 ~~~~~~~~ 248 (251)
|.+||+|.
T Consensus 424 ~~~~~~~~ 431 (439)
T 2akz_A 424 GHNFRNPS 431 (439)
T ss_dssp GGGTTCGG
T ss_pred CccCCCcc
Confidence 99999884
No 7
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=2.7e-66 Score=493.40 Aligned_cols=235 Identities=51% Similarity=0.796 Sum_probs=223.9
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCc-c-ceeeeeehhhhcccccCCcceeecCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYI-G-KIVIGMDVAASEFYDSKDKTYDLNFKEEN 78 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~-~-kI~iglD~Aase~~~~~~g~Y~l~~~~~~ 78 (251)
|+||.+|++++ .+++|||||||+|++.++++++++|.+||+++||+ + +|.|++|+++||||+.++|+|++. +
T Consensus 211 ~~lK~~lk~~g--~~t~vGdeggfap~~~~~~e~l~~i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~--~-- 284 (449)
T 3uj2_A 211 HALAGLLKSKG--LATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILP--K-- 284 (449)
T ss_dssp HHHHHHHHHTT--CCCCBCTTSCBCCCCSCHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECT--T--
T ss_pred HHHHHHHhhcC--CccccCCCCCcCCCccCHHHHHHHHHHHHHHhccccCCceEEEEEcchhhhccccCceeecc--C--
Confidence 57898999884 88999999999999999999999999999999998 4 799999999999998766899975 2
Q ss_pred CCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 79 NDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 79 ~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
.++.+|++|++++|++++++|||++|||||+++||++|++|+++++.++||||||+++||+.+++++++.++||+++|
T Consensus 285 --~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i 362 (449)
T 3uj2_A 285 --CKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILI 362 (449)
T ss_dssp --TCCEEEHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred --cccccCHHHHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEE
Confidence 356789999999999989999999999999999999999999999888999999999999999999999999999999
Q ss_pred eccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcc
Q 040341 159 KVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAI 238 (251)
Q Consensus 159 K~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~ 238 (251)
|++|+||+||+++++++|+++||.+|||||||||+|+||||||||++++|||+|+||||||++||||||||||||++.++
T Consensus 363 Kv~~iGGiTea~kia~lA~~~Gi~~~v~H~sgET~d~~iadLaVa~~~~~ik~G~~~r~er~akyn~llriee~l~~~~~ 442 (449)
T 3uj2_A 363 KLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTIADLAVALNTGQIKTGAPSRSERVAKYNQLLRIEEELGDSAV 442 (449)
T ss_dssp CHHHHCSHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGCB
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhCCCcccCCCCchhhHHHHHHHHHHHHHHhccccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcc
Q 040341 239 YAGTK 243 (251)
Q Consensus 239 ~~~~~ 243 (251)
|+|+.
T Consensus 443 ~~~~~ 447 (449)
T 3uj2_A 443 YPGFT 447 (449)
T ss_dssp CCGGG
T ss_pred eCCcc
Confidence 99964
No 8
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=1.1e-62 Score=466.97 Aligned_cols=241 Identities=55% Similarity=0.858 Sum_probs=225.6
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENND 80 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d 80 (251)
|+||..|+.|+|..+|+|||||||+|++.+++++++++.+||+++||+++|.+++|+++++||++.+++|++.+..+
T Consensus 191 ~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~G~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~--- 267 (432)
T 2ptz_A 191 HSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKFAICMDCAASETYDEKKQQYNLTFKSP--- 267 (432)
T ss_dssp HHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTTCTTSCEEEEECCGGGGEETTTTEEETTTTSS---
T ss_pred HHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHhCCcCCcEEEEECcccccccccCceeEeecccc---
Confidence 46788888887766799999999999999999999999999999999877999999999999986668998743210
Q ss_pred CCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 81 GSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 81 ~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
.++.+++++++++|.+++++|||++|||||+++||++|++|++++|.++||||||++|||+.+++++++.++||+++||+
T Consensus 268 ~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~ 347 (432)
T 2ptz_A 268 EPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKI 347 (432)
T ss_dssp SCCEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred ccCCCCHHHHHHHHHHHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecc
Confidence 15678999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcccc
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~~~ 240 (251)
||+||+||+++++++|+++|+.+|+|||||||+|+++||||||++++|||+|+|||+||++||||||||||+|++.++|+
T Consensus 348 ~~~GGitea~~i~~lA~~~g~~v~~~h~~get~~~~~a~lava~~~~~ik~G~~~r~er~~kyn~llrie~~l~~~~~~~ 427 (432)
T 2ptz_A 348 NQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALGSGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKFG 427 (432)
T ss_dssp HHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCSEEECCSSCSHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEecCCCCccHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHHHHHHhccCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cccc
Q 040341 241 GTKF 244 (251)
Q Consensus 241 ~~~~ 244 (251)
|+.|
T Consensus 428 ~~~~ 431 (432)
T 2ptz_A 428 FPGW 431 (432)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 9876
No 9
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=2.5e-56 Score=423.07 Aligned_cols=238 Identities=47% Similarity=0.744 Sum_probs=224.4
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCc-c-ceeeeeehhhhcccccCCcceeecCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYI-G-KIVIGMDVAASEFYDSKDKTYDLNFKEEN 78 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~-~-kI~iglD~Aase~~~~~~g~Y~l~~~~~~ 78 (251)
|.||.+|+++ | ..+.||++|||+|++++..+.++.|.+|++++||+ + ++.+.+|+|||+||++ ++|++..
T Consensus 190 ~~lK~~l~~~-g-~~~kvG~~gg~~~~~~~d~~~l~~vreai~~~g~~~G~dv~l~vDaaas~~~~~--~~Y~~~~---- 261 (431)
T 2fym_A 190 HHLAKVLKAK-G-MNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKD--GKYVLAG---- 261 (431)
T ss_dssp HHHHHHHHHT-T-CCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEET--TEEEEGG----
T ss_pred HHHHHHHHhc-C-cccccCcccCCCCCccchHHHHHHHHHHHHHhccCCCCccEEEEeechhhcccc--Cceeecc----
Confidence 3578888887 3 55899999999999999999999999999999999 4 6999999999999985 8999862
Q ss_pred CCCC-CccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeE
Q 040341 79 NDGS-QKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 157 (251)
Q Consensus 79 ~d~~-~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~il 157 (251)
.| +.+|++|+++++++|.++|||.+|||||+++||++|++|+++++.++|||+||++++|+.+++++++.+++++++
T Consensus 262 --~n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ 339 (431)
T 2fym_A 262 --EGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSIL 339 (431)
T ss_dssp --GTTEEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred --CCCCCCCHHHHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEE
Confidence 35 789999999999998667999999999999999999999999988899999999999999999999999999999
Q ss_pred eeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCc
Q 040341 158 LKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAA 237 (251)
Q Consensus 158 IK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~ 237 (251)
|||+|+||+||+++++++|+++|+.+|+||++|||+++++|||+||++++|+|+|+|+|+||++|||||||||++|++++
T Consensus 340 ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~la~a~~~~~i~~G~~~~~er~~kyn~ll~ie~~l~~~~ 419 (431)
T 2fym_A 340 IKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKA 419 (431)
T ss_dssp ECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCEEEECCCSCSHHHHHHHHHHHHHHHHHGGGS
T ss_pred ECccccCCHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHHHHHhcCCCccccCCCccchHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC-ccccCCC
Q 040341 238 IYAG-TKFRAPV 248 (251)
Q Consensus 238 ~~~~-~~~~~~~ 248 (251)
.|+| +.||.|.
T Consensus 420 ~~~~~~~~~~~~ 431 (431)
T 2fym_A 420 PYNGRKEIKGQA 431 (431)
T ss_dssp CCCGGGGSTTCC
T ss_pred eecChhhccCCC
Confidence 9999 7798873
No 10
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=1.9e-54 Score=411.75 Aligned_cols=242 Identities=45% Similarity=0.775 Sum_probs=220.4
Q ss_pred ChHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCcc--ceeeeeehhhhcccccCCcceeecCCCCC
Q 040341 1 MFLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIG--KIVIGMDVAASEFYDSKDKTYDLNFKEEN 78 (251)
Q Consensus 1 ~~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~--kI~iglD~Aase~~~~~~g~Y~l~~~~~~ 78 (251)
+.+|.+|+.| | ..+.||++|||+|++++..+.++.|.+|++++||++ +|.+.+|+|||+||+.+++.|+++ ++..
T Consensus 197 ~~lK~~lk~k-g-~~~kvG~~gg~~~~~~~d~~~l~avreav~~agy~pG~dv~L~vDaaas~~~~~~n~~y~~~-~n~~ 273 (444)
T 1w6t_A 197 HALKKILKSR-G-LETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYT-KFEG 273 (444)
T ss_dssp HHHHHHHHHT-T-CCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGBC--CCCEETH-HHHC
T ss_pred HHHHHHHHhc-C-CccccCCCCCCCCchHhHHHHHHHHHHHHHHhccCCCCCcEEEEEccchhcccccCCceeec-cccC
Confidence 3578888888 3 568999999999999999999999999999999995 799999999999998556899873 1100
Q ss_pred CCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 79 NDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 79 ~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
. ....+|++|+++++.+|.++|||.+|||||.++||++|++|+++++.++|||+||++++|+.+++++++.+++++++|
T Consensus 274 ~-~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 352 (444)
T 1w6t_A 274 E-GAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILI 352 (444)
T ss_dssp T-TCCEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred c-ccCCCCHHHHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEE
Confidence 0 013489999999999987889999999999999999999999999888999999977999999999999999999999
Q ss_pred eccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCcc
Q 040341 159 KVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAI 238 (251)
Q Consensus 159 K~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~ 238 (251)
|++|+||+||+++++++|+++|+.+|+||++|||+++++|||+||++++|+|+|+|+|+||++|||||||||++|++++.
T Consensus 353 k~~~~GGitea~~ia~lA~~~g~~v~~~h~~get~i~~~a~lava~~~~~i~~G~~~r~er~~kyn~ll~ie~~l~~~~~ 432 (444)
T 1w6t_A 353 KVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAE 432 (444)
T ss_dssp CHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCCEEECCCSSSHHHHHHHHHHHHHHHHHGGGCE
T ss_pred cccccCCHHHHHHHHHHHHHCCCeEEecCCCCCchHHHHHHHHHhcCCCcccCCCCcccccHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-ccccC
Q 040341 239 YAG-TKFRA 246 (251)
Q Consensus 239 ~~~-~~~~~ 246 (251)
|+| +.||+
T Consensus 433 ~~~~~~~~~ 441 (444)
T 1w6t_A 433 YRGLKSFYN 441 (444)
T ss_dssp ECGGGGCTT
T ss_pred cCChhhhcc
Confidence 999 66864
No 11
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.7e-52 Score=396.29 Aligned_cols=234 Identities=54% Similarity=0.889 Sum_probs=221.1
Q ss_pred hHHHHHHHhcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCC
Q 040341 2 FLQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDG 81 (251)
Q Consensus 2 ~lk~~l~~~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~ 81 (251)
.+|.+++.|+|...++|||+|||+|+++...+.++.|.+|++++|+++++.+.+|+++|+||++ +.|+++
T Consensus 194 ~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G~~~~~~L~vDa~as~~~~n--~~~~~~-------- 263 (427)
T 2pa6_A 194 VLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDEVVFALDAAASEFYKD--GYYYVE-------- 263 (427)
T ss_dssp HHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEET--TEEEET--------
T ss_pred HHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhCCCCCcEEEEEcchhccccC--Cceeec--------
Confidence 5677777787777789999999999999999999999999999999767999999999999975 899874
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
|+.+|++|+++++.+++++|||.+|||||.++||++|++|+++. ++||++||+++||+.+++++++.++++.++|||+
T Consensus 264 n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 341 (427)
T 2pa6_A 264 GKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKEL--DIQIVGDDLFVTNVERLRKGIEMKAANALLLKVN 341 (427)
T ss_dssp TEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHS--SSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhC--CCeEEeCccccCCHHHHHHHHHhCCCCEEEEccc
Confidence 57899999999999888999999999999999999999999997 8999999987999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhCCCccccC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG 241 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~~~~~~~~ 241 (251)
|+||+||+++++++|+++|+.+|+||+++||+++++|+|+||..++++|+|+|+|+||++|||||||||++|++ ++|+|
T Consensus 342 ~~GGitea~~ia~lA~~~g~~~~~~h~~~es~i~~aa~l~~a~~~~~~~~G~~~~~er~~kyn~llri~~~~~~-~~~~~ 420 (427)
T 2pa6_A 342 QIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSGQIKTGAPARGERTAKYNQLIRIEQELGL-SKYAG 420 (427)
T ss_dssp HHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCSEEECCSSCSHHHHHHHHHHHHHHHHSSS-CEECG
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEeCCCCCChHHHHHHHHHHhCCCccccCCCcchhHHHHHHHHHHHHHHhcc-ccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred ccccCCC
Q 040341 242 TKFRAPV 248 (251)
Q Consensus 242 ~~~~~~~ 248 (251)
+.|+.|.
T Consensus 421 ~~~~~~~ 427 (427)
T 2pa6_A 421 RNFRCPF 427 (427)
T ss_dssp GGCSCCC
T ss_pred ccccCCC
Confidence 8898773
No 12
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=99.97 E-value=1e-31 Score=253.22 Aligned_cols=199 Identities=15% Similarity=0.164 Sum_probs=161.3
Q ss_pred CcHHHHHHHHHHHHhcC-Ccc-ceeeeeehhh-----------hcccccCCcceeecCCCCCCCCCC------ccChhhH
Q 040341 30 ESYEGFELLKTAIAKGG-YIG-KIVIGMDVAA-----------SEFYDSKDKTYDLNFKEENNDGSQ------KVSGDGL 90 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aG-y~~-kI~iglD~Aa-----------se~~~~~~g~Y~l~~~~~~~d~~~------~~s~~el 90 (251)
++++.++...+++ ..| |+. |+++|.+... -+..++.-| |++.+. .|+|+ .+|++++
T Consensus 180 ~~~~~~~~~~~~~-~~G~~~~iK~KvG~~~~~~~~~l~~d~~~v~aiR~~~G-~~~~L~---vDan~~~~~~~~~~~~~A 254 (413)
T 1kko_A 180 AVDKMILKGVDVL-PHALINNVEEKLGFKGEKLREYVRWLSDRILSLRSSPR-YHPTLH---IDVYGTIGLIFDMDPVRC 254 (413)
T ss_dssp HHHHHHHTTCSEE-EETTCCCCCCCCCTTSHHHHHHHHHHHHHHHHHCSSTT-CCCEEE---EECTTHHHHHTTTCHHHH
T ss_pred CHHHHHHHHHHHH-hCCCccEEEEecCCChhhHHHHHHHHHHHHHHHHHhhC-CCCeEE---EECCCccccccCCCHHHH
Confidence 3455544444434 468 886 8888865311 111111111 222222 24788 7899999
Q ss_pred HHHHHHhhhc-CCc-eeecCCCC----cccHHHHHHHHhhhC---CceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 91 KNVYRSFISD-HPI-VSIEDPFD----QDDWEHHAELTGKIG---RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 91 id~~~~l~~~-ypI-~~IEDP~~----e~D~~~~~~l~~~lg---~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
++++++|-+. +++ ++||||+. ++||++|++|+++++ .++||++|| +++|+.++++.++.++++.++|||+
T Consensus 255 ~~~~~~L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE-~~~~~~~~~~~i~~~a~d~i~ik~~ 333 (413)
T 1kko_A 255 AEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADE-WCNTYQDIVDFTDAGSCHMVQIKTP 333 (413)
T ss_dssp HHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECT-TCCSHHHHHHHHHTTCCSEEEECGG
T ss_pred HHHHHHHHhccCCcceEEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCC-CCCCHHHHHHHHHhCCCCEEEeCcc
Confidence 9999996432 342 29999999 889999999999943 379999999 8999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCCCCCCc--hhHhhhhhhcccCcc--ccCCCCchhHHHHhhHHHHHHHHhC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGETED--TFIADLSVGLATGQI--KTGAPCRSERLAKYNQLLRIEEELG 234 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d--~~iadLAva~~~~~i--k~G~~~r~Er~aKyN~llrie~~l~ 234 (251)
|+||+||+++++++|+++|+.+|++|+++||++ .+++|||+++++.++ |+|..++++|++|||||+|||+++.
T Consensus 334 ~~GGitea~~i~~~A~~~gi~~~~~~~~~et~i~~aa~~hlaaa~~~~~ip~kpG~g~~~~~~~~~n~l~r~~~~~~ 410 (413)
T 1kko_A 334 DLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQ 410 (413)
T ss_dssp GGSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHHHHHHHHHCCSEEECCSCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEecCCCCCCHHHHHHHHHHHHcCCCCcccCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 789999999999999 9999999999999999999999874
No 13
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=99.97 E-value=2.3e-31 Score=250.49 Aligned_cols=198 Identities=16% Similarity=0.236 Sum_probs=163.1
Q ss_pred CcHHHHHHHHHHHHhcC-Ccc-ceeeeeeh-----------hhhcccccCCcceeecCCCCCCCCCCc------cChhhH
Q 040341 30 ESYEGFELLKTAIAKGG-YIG-KIVIGMDV-----------AASEFYDSKDKTYDLNFKEENNDGSQK------VSGDGL 90 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aG-y~~-kI~iglD~-----------Aase~~~~~~g~Y~l~~~~~~~d~~~~------~s~~el 90 (251)
++++.++.+.+++ +.| |+. |+++|-+. +.-+..++.-| |++.+. .|+|+. +|++++
T Consensus 180 ~~~~~~~~a~~~~-~~G~~~~~KiKvG~~~~~~~~~~~~d~~~v~avR~~~G-~~~~l~---vDaN~~~~~~~~~~~~~a 254 (413)
T 1kcz_A 180 NVDKMIIKEADVL-PHALINNVEEKLGLKGEKLLEYVKWLRDRIIKLRVRED-YAPIFH---IDVYGTIGAAFDVDIKAM 254 (413)
T ss_dssp HHHHHHHTTCSEE-EECCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHCSSTT-CCCEEE---EECTTHHHHHTTTCHHHH
T ss_pred CHHHHHHHHHHHH-HhcchhheeeccCCCccchhhHHHHHHHHHHHHHHhcC-CCceEE---EecCCCcccccCCCHHHH
Confidence 3566666555555 557 986 88888642 21111211111 222222 258888 999999
Q ss_pred HHHHHHhhhcC--Cce-eecCCCC----cccHHHHHHHHhhh---CCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 91 KNVYRSFISDH--PIV-SIEDPFD----QDDWEHHAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 91 id~~~~l~~~y--pI~-~IEDP~~----e~D~~~~~~l~~~l---g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
++++..| ++| ||. +||||+. ++||++|++|++++ |.++||++|| +++|+.++++.++.++++.++|||
T Consensus 255 ~~~~~~L-~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE-~~~~~~~~~~~i~~~a~d~v~ik~ 332 (413)
T 1kcz_A 255 ADYIQTL-AEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADE-WCNTVEDVKFFTDNKAGHMVQIKT 332 (413)
T ss_dssp HHHHHHH-HHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECT-TCCSHHHHHHHHHTTCSSEEEECT
T ss_pred HHHHHHH-HhhcCCcceEEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCC-CcCCHHHHHHHHHhCCCCEEEeCc
Confidence 9999996 666 887 9999994 66999999999983 2279999999 699999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHh--hhhhhcccCcccc--CCCCchhHHHHhhHHHHHHHHhC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA--DLSVGLATGQIKT--GAPCRSERLAKYNQLLRIEEELG 234 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~ia--dLAva~~~~~ik~--G~~~r~Er~aKyN~llrie~~l~ 234 (251)
+++||+|++++++++|+++|+.+|+++++.||++++.+ |||+++.+.+++. |.+++++|++|||||+|||++|.
T Consensus 333 ~~~GGit~a~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~hlaaa~~~~~i~~~pG~~~~~g~~~~~n~~~r~~~~~~ 410 (413)
T 1kcz_A 333 PDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGMACGARQVLAKPGMGVDEGMMIVKNEMNRVLALVG 410 (413)
T ss_dssp GGGSSTHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHHTCSEEECCSSSSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecCCCCCCHHHHHHHHHHHhcCCCCceeecCCCCCCcchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988 9999999999999 99999999999999999999985
No 14
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=99.90 E-value=2e-23 Score=193.98 Aligned_cols=173 Identities=17% Similarity=0.200 Sum_probs=142.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-eh--------hhhcccc-cCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-DV--------AASEFYD-SKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~--------Aase~~~-~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
..++++.++.+.+++ +.||+. |+++|- |+ ++++.+. + +-...+ |+|+.+|.++.++++..
T Consensus 160 ~~~~e~~~~~a~~~~-~~G~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~-~~~l~v-------DaN~~~~~~~a~~~~~~ 230 (377)
T 2pge_A 160 MGEAAFMQEQIEAKL-AEGYGCLKLKIGAIDFDKECALLAGIRESFSPQ-QLEIRV-------DANGAFSPANAPQRLKR 230 (377)
T ss_dssp CCCHHHHHHHHHHHH-HTTCSEEEEEC---CHHHHHHHHHHHHHHSCTT-TCEEEE-------ECTTBBCTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-HHhhhhheeecCCCChHHHHHHHHHHHHHcCCC-CceEEE-------ECCCCCCHHHHHHHHHH
Confidence 457888888888888 689996 899884 42 2233332 1 123344 48899999999998765
Q ss_pred hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHH-HHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 97 FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKR-VEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 97 l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~-i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
+++|+|.+||||+.++||++|++|++++ ++||++||...|..++ ++++++.++++.++|||+|+||+|++++++++
T Consensus 231 -l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~ 307 (377)
T 2pge_A 231 -LSQFHLHSIEQPIRQHQWSEMAALCANS--PLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIEL 307 (377)
T ss_dssp -HHTTCCSEEECCBCSSCHHHHHHHHHHC--SSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred -HhcCCCcEEEccCCcccHHHHHHHHhhC--CCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHH
Confidence 6999999999999999999999999998 7999999976665554 78999999999999999999999999999999
Q ss_pred HHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCC
Q 040341 176 SKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 213 (251)
Q Consensus 176 a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~ 213 (251)
|+++|+.+|+|++ .||++++.+.+.++...+...+.+
T Consensus 308 A~~~g~~~~~~~~-~es~i~~~a~~hlaa~~~~~~~~~ 344 (377)
T 2pge_A 308 ARERGIGFWITSA-LESNLGLAAIAQWTALYQPTMPQG 344 (377)
T ss_dssp HHHTTCEEEEBCC-SCCHHHHHHHHHHHHTTCCSSCBB
T ss_pred HHHCCCeEEecCC-cccHHHHHHHHHHHHCCCCCcccc
Confidence 9999999999998 799999999888887776654443
No 15
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=99.87 E-value=8e-22 Score=183.71 Aligned_cols=169 Identities=18% Similarity=0.259 Sum_probs=138.9
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeee--eehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIG--MDVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~ig--lD~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
++++.++.+.+++ +.||+. |+++| .|++ .++.+++ -...+ |+|+.+|.+++ ++. +.+++|+
T Consensus 161 ~~~~~~~~a~~~~-~~G~~~~KiKvg~~~d~~~v~avr~a~~~--~~l~v-------DaN~~~~~~~a-~~~-~~l~~~~ 228 (386)
T 1wue_A 161 DLPQLLKQVQLAV-EKGYQRVKLKIRPGYDVEPVALIRQHFPN--LPLMV-------DANSAYTLADL-PQL-QRLDHYQ 228 (386)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECBTTBSHHHHHHHHHHCTT--SCEEE-------ECTTCCCGGGH-HHH-HGGGGSC
T ss_pred CHHHHHHHHHHHH-HhhhheEEEeeCcHHHHHHHHHHHHhCCC--CeEEE-------eCCCCCCHHHH-HHH-HHHHhCC
Confidence 5788888888877 689996 88876 4553 2333422 23444 48899999997 765 4579999
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCc
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~ 182 (251)
|.+||||+.++||++|++|++++ ++||++|| ++.++.+++++++.++++.+++||+++||+|++++++++|+++|+.
T Consensus 229 i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~ 305 (386)
T 1wue_A 229 LAMIEQPFAADDFLDHAQLQREL--KTRICLDE-NIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLL 305 (386)
T ss_dssp CSCEECCSCTTCSHHHHHHHTTC--SSCEEECT-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred CeEEeCCCCcccHHHHHHHHHhc--CCCEEeCC-ccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCe
Confidence 99999999999999999999998 79999999 5788999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 183 ~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
+|+|++ .||.....+.+.++....+...+.+
T Consensus 306 ~~~~~~-~es~i~~aa~~hlaa~~~~~~~~~~ 336 (386)
T 1wue_A 306 VWLGGM-FESGVGRALNLQFASQPTFSFPGDI 336 (386)
T ss_dssp EEECCC-CCCHHHHHHHHHHHTSTTCCSCCSC
T ss_pred EEECCC-cccHHHHHHHHHHHhCCCCCccccc
Confidence 999987 5887777777777654444444443
No 16
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=99.87 E-value=1.8e-21 Score=181.87 Aligned_cols=169 Identities=17% Similarity=0.257 Sum_probs=138.6
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeee--eehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIG--MDVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~ig--lD~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
++++..+.+.+++ +.||+. |++++ -|++ .++.+++ -...+ |+|+.+|.++. ++++. +++|+
T Consensus 161 ~~e~~~~~a~~~~-~~G~~~~KiKvg~~~d~~~v~avr~a~~~--~~l~v-------DaN~~~~~~~a-~~~~~-l~~~~ 228 (393)
T 1wuf_A 161 NVETLLQLVNQYV-DQGYERVKLKIAPNKDIQFVEAVRKSFPK--LSLMA-------DANSAYNREDF-LLLKE-LDQYD 228 (393)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEEECBTTBSHHHHHHHHTTCTT--SEEEE-------ECTTCCCGGGH-HHHHT-TGGGT
T ss_pred CHHHHHHHHHHHH-HHhhHhheeccChHHHHHHHHHHHHHcCC--CEEEE-------ECCCCCCHHHH-HHHHH-HHhCC
Confidence 5788888888877 679996 88776 4453 2333321 23344 48899999997 77655 79999
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCc
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~ 182 (251)
|.+||||+.++|+++|++|++++ ++||++|| +++++.+++++++.++++.+++||+++||+|++++++++|+++|+.
T Consensus 229 i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~ 305 (393)
T 1wuf_A 229 LEMIEQPFGTKDFVDHAWLQKQL--KTRICLDE-NIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEIL 305 (393)
T ss_dssp CSEEECCSCSSCSHHHHHHHTTC--SSEEEECT-TCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCE
T ss_pred CeEEECCCCCcCHHHHHHHHHhC--CCCEEECC-CcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCe
Confidence 99999999999999999999998 89999999 6899999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 183 ~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
+|+|++ .||.....+.+.++....+..++++
T Consensus 306 ~~~~~~-~es~i~~aa~~hlaa~~~~~~~~~l 336 (393)
T 1wuf_A 306 VWCGGM-LEAGVGRAHNIALAARNEFVFPGDI 336 (393)
T ss_dssp EEECCC-CCCHHHHHHHHHHHTSSSCCSCBSC
T ss_pred EEecCC-cccHHHHHHHHHHHhCCCCCccccc
Confidence 999986 5887777777777644444433433
No 17
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.87 E-value=1.3e-21 Score=180.68 Aligned_cols=170 Identities=19% Similarity=0.251 Sum_probs=143.3
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeee-eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGM-DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
+..++++..+.+.+++ +.||+. ||++|- |+ +.++.+.+ +-...+ |+|+.+|.++.+++++.
T Consensus 137 ~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~-~~~l~v-------Dan~~~~~~~a~~~~~~ 207 (366)
T 1tkk_A 137 SVNSPEEMAADAENYL-KQGFQTLKIKVGKDDIATDIARIQEIRKRVGS-AVKLRL-------DANQGWRPKEAVTAIRK 207 (366)
T ss_dssp CSCCHHHHHHHHHHHH-HHTCCEEEEECCSSCHHHHHHHHHHHHHHHCS-SSEEEE-------ECTTCSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH-HcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCC-CCeEEE-------ECCCCCCHHHHHHHHHH
Confidence 3457888888888887 689997 898885 43 12222211 112333 47899999999998887
Q ss_pred hhhc--CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 97 FISD--HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 97 l~~~--ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+++ |+|.+||||+.++||++|++|++++ ++||++|| +++++.++++.++.++++.++||++++||+|+++++++
T Consensus 208 -l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 283 (366)
T 1tkk_A 208 -MEDAGLGIELVEQPVHKDDLAGLKKVTDAT--DTPIMADE-SVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINA 283 (366)
T ss_dssp -HHHTTCCEEEEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred -HhhcCCCceEEECCCCcccHHHHHHHHhhC--CCCEEEcC-CCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHH
Confidence 688 9999999999999999999999998 79999999 68999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccc
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIK 210 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik 210 (251)
+|+++|+.+|++++ .||..++.++++++...+...
T Consensus 284 ~A~~~g~~~~~~~~-~es~i~~~a~~~laaa~~~~~ 318 (366)
T 1tkk_A 284 MAEACGVECMVGSM-IETKLGITAAAHFAASKRNIT 318 (366)
T ss_dssp HHHHHTCCEEECCS-SCCHHHHHHHHHHHHHCTTEE
T ss_pred HHHHcCCcEEecCc-cccHHHHHHHHHHHHcCCCCc
Confidence 99999999999998 799999999988887554433
No 18
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=99.86 E-value=2.8e-21 Score=178.29 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=150.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHH
Q 040341 24 FAPNIQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVY 94 (251)
Q Consensus 24 fap~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~ 94 (251)
+...+.++++..+.+.+++ +.||+. |+++|.+. |.++.+.+ .-...+ |+|+.+|.++.+++.
T Consensus 133 ~~~~~~~~~~~~~~a~~~~-~~G~~~~K~K~g~~~~~d~~~v~avR~a~g~-~~~l~v-------Dan~~~~~~~a~~~~ 203 (354)
T 3jva_A 133 ITLGIDEPNVMAQKAVEKV-KLGFDTLKIKVGTGIEADIARVKAIREAVGF-DIKLRL-------DANQAWTPKDAVKAI 203 (354)
T ss_dssp EEECSCCHHHHHHHHHHHH-HTTCSEEEEECCSCHHHHHHHHHHHHHHHCT-TSEEEE-------ECTTCSCHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHH-HhCCCeEEEEeCCCHHHHHHHHHHHHHHcCC-CCeEEE-------ECCCCCCHHHHHHHH
Confidence 3445678899999999988 799997 99998653 22333321 112333 478999999998988
Q ss_pred HHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 95 RSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 95 ~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+. +++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|+++++++
T Consensus 204 ~~-L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~ 279 (354)
T 3jva_A 204 QA-LADYQIELVEQPVKRRDLEGLKYVTSQV--NTTIMADE-SCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQ 279 (354)
T ss_dssp HH-TTTSCEEEEECCSCTTCHHHHHHHHHHC--SSEEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HH-HHhcCCCEEECCCChhhHHHHHHHHHhC--CCCEEEcC-CcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHH
Confidence 87 5999999999999999999999999998 79999999 69999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
+|+++|+.+|++++.|||...+.+.+.++...+.......
T Consensus 280 ~A~~~gi~~~~~~~~~es~i~~~a~~hlaaa~~~~~~~e~ 319 (354)
T 3jva_A 280 ICETAGIECMIGCMAEETTIGITAAAHLAAAQKNITRADL 319 (354)
T ss_dssp HHHHTTCEEEECCCTTCCHHHHHHHHHHHHHCTTEEEECC
T ss_pred HHHHcCCeEEecCCCcccHHHHHHHHHHHhcCCCCCcccc
Confidence 9999999999999988999999888888876555544443
No 19
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=99.86 E-value=3.6e-21 Score=178.31 Aligned_cols=159 Identities=21% Similarity=0.287 Sum_probs=134.6
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeee--eehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIG--MDVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~ig--lD~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
.++++..+.+.+++ +.||+. |++++ .|++ .++.+++ -...+ |+|+.+|.++ +++++. +++|
T Consensus 147 ~~~~~~~~~a~~~~-~~G~~~iKik~~~~~d~~~v~avr~a~~~--~~l~v-------Dan~~~~~~~-~~~~~~-l~~~ 214 (375)
T 1r0m_A 147 ADEQATVDLVRRHV-EQGYRRIKLKIKPGWDVQPVRATREAFPD--IRLTV-------DANSAYTLAD-AGRLRQ-LDEY 214 (375)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEECBTTBSHHHHHHHHHHCTT--SCEEE-------ECTTCCCGGG-HHHHHT-TGGG
T ss_pred CCHHHHHHHHHHHH-HhcccEEEEecChHHHHHHHHHHHHHcCC--CeEEE-------eCCCCCCHHH-HHHHHH-HHhC
Confidence 47888888888888 689996 77765 3442 2333321 23344 3788999999 998888 6999
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW 181 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~ 181 (251)
+|.+||||+.++||++|++|++++ ++||++|| +++++.++++.++.++++.++|||+++||+|++++++++|+++|+
T Consensus 215 ~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 291 (375)
T 1r0m_A 215 DLTYIEQPLAWDDLVDHAELARRI--RTPLCLDE-SVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGA 291 (375)
T ss_dssp CCSCEECCSCTTCSHHHHHHHHHC--SSCEEEST-TCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTC
T ss_pred CCcEEECCCCcccHHHHHHHHHhC--CCCEEecC-ccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998 79999999 689999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCchhHhhhhhh
Q 040341 182 GVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 182 ~~ivs~rsgEt~d~~iadLAva 203 (251)
.+|++|+. ||.....+.+.++
T Consensus 292 ~~~~~~~~-es~i~~aa~~hla 312 (375)
T 1r0m_A 292 PVWCGGML-ESGIGRAHNIHLS 312 (375)
T ss_dssp CEEECCCC-CCHHHHHHHHHHT
T ss_pred cEEecCcc-ccHHHHHHHHHHH
Confidence 99999984 8887776555555
No 20
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.86 E-value=3.2e-21 Score=178.20 Aligned_cols=170 Identities=19% Similarity=0.246 Sum_probs=143.0
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHH-HHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLK-NVYRS 96 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~eli-d~~~~ 96 (251)
+..++++..+.+.+++ ++||+. ||++|-|+ +.++.+.+ .+.+. .|+|+.+|.+|.+ ++.+.
T Consensus 138 ~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~---~~~l~-----vDan~~~~~~~a~~~~~~~ 208 (369)
T 2p8b_A 138 SIADPENMAEEAASMI-QKGYQSFKMKVGTNVKEDVKRIEAVRERVGN---DIAIR-----VDVNQGWKNSANTLTALRS 208 (369)
T ss_dssp CSCCHHHHHHHHHHHH-HTTCCEEEEECCSCHHHHHHHHHHHHHHHCT---TSEEE-----EECTTTTBSHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHH-HcCcCEEEEEeCCCHHHHHHHHHHHHHHhCC---CCeEE-----EECCCCCCHHHHHHHHHHH
Confidence 3457888888888877 689996 89888654 22222211 23232 2478899999998 98776
Q ss_pred hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 97 FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 97 l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
+++|+|.+||||+.++||++|++|++++ ++||++|| ++++++++++.++.++++.++||++++||+|++++++++|
T Consensus 209 -l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A 284 (369)
T 2p8b_A 209 -LGHLNIDWIEQPVIADDIDAMAHIRSKT--DLPLMIDE-GLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQA 284 (369)
T ss_dssp -STTSCCSCEECCBCTTCHHHHHHHHHTC--CSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHH
T ss_pred -HHhCCCcEEECCCCcccHHHHHHHHHhC--CCCEEeCC-CCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHH
Confidence 6999999999999999999999999998 79999999 6899999999999999999999999999999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhHhhhhhhcccCccc
Q 040341 177 KRAGWGVMASHRSGETEDTFIADLSVGLATGQIK 210 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik 210 (251)
+++|+.+|++++ +||..++.++++++...+...
T Consensus 285 ~~~g~~~~~~~~-~es~i~~~a~~~laa~~~~~~ 317 (369)
T 2p8b_A 285 EMAGIECQVGSM-VESSVASSAGFHVAFSKKIIT 317 (369)
T ss_dssp HHTTCEEEECCS-SCCHHHHHHHHHHHTTCTTEE
T ss_pred HHcCCcEEecCC-CccHHHHHHHHHHHHcCCCCc
Confidence 999999999996 799999999988887655433
No 21
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=99.86 E-value=4.2e-21 Score=177.39 Aligned_cols=159 Identities=19% Similarity=0.257 Sum_probs=134.3
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeee--eehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIG--MDVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~ig--lD~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
.++++..+.+.+++ +.||+. |++++ .|++ .++.+++ -...+ |+|+.+|.++ +++.+. +++|
T Consensus 140 ~~~~~~~~~a~~~~-~~G~~~iKik~~~~~d~~~v~avr~a~~~--~~l~v-------Dan~~~~~~~-~~~~~~-l~~~ 207 (369)
T 2zc8_A 140 PSVEDTLRVVERHL-EEGYRRIKLKIKPGWDYEVLKAVREAFPE--ATLTA-------DANSAYSLAN-LAQLKR-LDEL 207 (369)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEECBTTBSHHHHHHHHHHCTT--SCEEE-------ECTTCCCGGG-HHHHHG-GGGG
T ss_pred CCHHHHHHHHHHHH-HhhhheeeeecChhHHHHHHHHHHHHcCC--CeEEE-------ecCCCCCHHH-HHHHHH-HHhC
Confidence 47788888888888 689996 77765 4442 2333321 23344 4789999999 998887 6999
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW 181 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~ 181 (251)
+|.+||||+.++||++|++|++++ ++||++|| +++++.++++.++.++++.++|||+++||+|++++++++|+++|+
T Consensus 208 ~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 284 (369)
T 2zc8_A 208 RLDYIEQPLAYDDLLDHAKLQREL--STPICLDE-SLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGI 284 (369)
T ss_dssp CCSCEECCSCTTCSHHHHHHHHHC--SSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred CCcEEECCCCcccHHHHHHHHhhC--CCCEEEcC-ccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998 79999999 689999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCchhHhhhhhh
Q 040341 182 GVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 182 ~~ivs~rsgEt~d~~iadLAva 203 (251)
.+|++|+. ||.....+.+.++
T Consensus 285 ~~~~~~~~-es~i~~aa~~hla 305 (369)
T 2zc8_A 285 PLWMGGML-EAGVGRAHNLHLA 305 (369)
T ss_dssp CEEECCCC-CCHHHHHHHHHHT
T ss_pred cEEecCcc-ccHHHHHHHHHHH
Confidence 99999984 8877776655555
No 22
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.85 E-value=2.7e-21 Score=178.77 Aligned_cols=173 Identities=13% Similarity=0.137 Sum_probs=141.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-----ehhhhcccccCCc-ceeecCCCCCCCCCCccChhhHHHHHHHhhhc
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-----DVAASEFYDSKDK-TYDLNFKEENNDGSQKVSGDGLKNVYRSFISD 100 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ 100 (251)
..++++..+.+.++++.+||+. ||++|- |++.-+..++.-| .+.+. .|+|+.+|.+|.+++.+. +++
T Consensus 140 ~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~-----vDan~~~~~~~a~~~~~~-l~~ 213 (370)
T 1nu5_A 140 SGDTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVR-----VDVNQGWDEQTASIWIPR-LEE 213 (370)
T ss_dssp SSCHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEE-----EECTTCCCHHHHHHHHHH-HHH
T ss_pred CCCHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEE-----EECCCCCCHHHHHHHHHH-HHh
Confidence 4567888888888884499996 898885 3322222221101 23332 237889999999998776 699
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
|+|.+||||+.++||++|++|++++ ++||++|| ++++++++++.++.++++.++||++++||+|++++++++|+++|
T Consensus 214 ~~i~~iEqP~~~~~~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 290 (370)
T 1nu5_A 214 AGVELVEQPVPRANFGALRRLTEQN--GVAILADE-SLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAG 290 (370)
T ss_dssp HTCCEEECCSCTTCHHHHHHHHHHC--SSEEEEST-TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHT
T ss_pred cCcceEeCCCCcccHHHHHHHHHhC--CCCEEeCC-CCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998 79999999 68999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCchhHhhhhhhcccCccc
Q 040341 181 WGVMASHRSGETEDTFIADLSVGLATGQIK 210 (251)
Q Consensus 181 ~~~ivs~rsgEt~d~~iadLAva~~~~~ik 210 (251)
+.+|++++ .||.....+.+.++...+.+.
T Consensus 291 ~~~~~~~~-~es~i~~aa~~hlaaa~~~~~ 319 (370)
T 1nu5_A 291 ISSYGGTM-LDSTVGTAAALHVYATLPSLP 319 (370)
T ss_dssp CEEEECCS-SCCHHHHHHHHHHHTTSSCCT
T ss_pred CcEEecCC-cchHHHHHHHHHHHhcCCCCC
Confidence 99999995 799888887777766554443
No 23
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=99.85 E-value=1.3e-20 Score=173.96 Aligned_cols=160 Identities=19% Similarity=0.265 Sum_probs=133.6
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeee--eehhh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIG--MDVAA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~ig--lD~Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
.++++..+.+.+++ ++||+. |++++ .|++. ++.+.+ +-...+ |+|+.+|.+| +++++. +++|
T Consensus 140 ~~~~~~~~~a~~~~-~~Gf~~vKik~~~~~~~e~v~avr~~~g~-~~~l~v-------Dan~~~~~~~-~~~~~~-l~~~ 208 (368)
T 1sjd_A 140 DTIPQLLDVVGGYL-DEGYVRIKLKIEPGWDVEPVRAVRERFGD-DVLLQV-------DANTAYTLGD-APQLAR-LDPF 208 (368)
T ss_dssp SCHHHHHHHHHHHH-HHTCSEEEEECBTTBSHHHHHHHHHHHCT-TSEEEE-------ECTTCCCGGG-HHHHHT-TGGG
T ss_pred CCHHHHHHHHHHHH-HhCccEEEEecCchhHHHHHHHHHHhcCC-CceEEE-------eccCCCCHHH-HHHHHH-HHhc
Confidence 47788888888887 689996 77765 44432 233321 112333 4789999999 998887 6999
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW 181 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~ 181 (251)
+|.+||||+..+||++|++|++++ ++||++|| +++++.++++.++.++++.++|||+++||+|++++++++|+++|+
T Consensus 209 ~i~~iE~P~~~~~~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 285 (368)
T 1sjd_A 209 GLLLIEQPLEEEDVLGHAELARRI--QTPICLDE-SIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGI 285 (368)
T ss_dssp CCSEEECCSCTTCHHHHHHHHTTC--SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTC
T ss_pred CCCeEeCCCChhhHHHHHHHHHhC--CCCEEECC-CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998 79999999 689999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCchhHhhhhhh
Q 040341 182 GVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 182 ~~ivs~rsgEt~d~~iadLAva 203 (251)
.+|++|+ .||.....+.+.++
T Consensus 286 ~~~~~~~-~es~i~~aa~~hla 306 (368)
T 1sjd_A 286 PVWCGGM-IETGLGRAANVALA 306 (368)
T ss_dssp CEEECCC-CCCHHHHHHHHHHH
T ss_pred cEEeCCc-cccHHHHHHHHHHH
Confidence 9999998 48877775555555
No 24
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=99.84 E-value=5.4e-21 Score=174.99 Aligned_cols=161 Identities=15% Similarity=0.147 Sum_probs=132.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-h----hh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-V----AA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-~----Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
+.++++..+.+.+++ +.||+. ||++|.+ + +. ++.+.+ .+.|. .|+|+.+|.++.+++++.
T Consensus 114 ~~~~e~~~~~a~~~~-~~G~~~~KiKvg~~~~~~d~~~v~avr~~~g~---~~~L~-----vDaN~~~~~~~A~~~~~~- 183 (332)
T 2ozt_A 114 LGSGQAALEQWQQSW-QRGQTTFKWKVGVMSPEEEQAILKALLAALPP---GAKLR-----LDANGSWDRATANRWFAW- 183 (332)
T ss_dssp ECTGGGHHHHHHHHH-HTTCCEEEEECSSSCHHHHHHHHHHHHHHSCT---TCEEE-----EECTTCCCHHHHHHHHHH-
T ss_pred cCChHHHHHHHHHHH-HcCCcEEEEEeCCCChHHHHHHHHHHHHHcCC---CCEEE-----EcccCCCCHHHHHHHHHH-
Confidence 457888999999988 689996 9998863 2 22 222221 23333 248999999999998887
Q ss_pred hhcC---CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 98 ISDH---PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 98 ~~~y---pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+++| +|.+||||+..+|+++|+.|++++ ++||++|| +++++.++++.++.++++.++|||+++||++ ++++
T Consensus 184 l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-s~~~~~~~~~~~~~~a~~~i~ik~~~~GGi~---~i~~ 257 (332)
T 2ozt_A 184 LDRHGNGKIEYVEQPLPPDQWQALLSLAQTV--TTAIALDE-SVVSAAEVQRWVDRGWPGFFVIKTALFGDPD---SLSL 257 (332)
T ss_dssp HHHHCCTTEEEEECCSCTTCHHHHHHHHHHC--SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECHHHHSCHH---HHHH
T ss_pred HHhhccCCcceeECCCCCCCHHHHHHHHHhC--CCCEEeCC-CCCCHHHHHHHHHhCCCCEEEEChhhhCCHH---HHHH
Confidence 5999 999999999999999999999998 79999999 7899999999999999999999999999998 5677
Q ss_pred HHHHc--CCcEEEecCCCCCCchhH--hhhhhhcc
Q 040341 175 MSKRA--GWGVMASHRSGETEDTFI--ADLSVGLA 205 (251)
Q Consensus 175 ~a~~~--g~~~ivs~rsgEt~d~~i--adLAva~~ 205 (251)
+|+++ |+.+|++|+ .||..... ++||.++.
T Consensus 258 ~A~~~~~gi~~~~~~~-~es~i~~aa~~hlaa~~~ 291 (332)
T 2ozt_A 258 LLRRGLEPQRLVFSSA-LEGAIARTAIFHLLETWQ 291 (332)
T ss_dssp HHHTTCCGGGEEEBCC-SCCHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCcEEEeCC-cchHHHHHHHHHHHHhCC
Confidence 99999 999999998 48887764 45555543
No 25
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=99.84 E-value=1.8e-20 Score=173.68 Aligned_cols=157 Identities=14% Similarity=0.087 Sum_probs=126.0
Q ss_pred cHHHHHHHHHHHHhcCCcc-ceeeeeeh----h----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 31 SYEGFELLKTAIAKGGYIG-KIVIGMDV----A----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 31 ~eeal~~i~~Ai~~aGy~~-kI~iglD~----A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
.++..+.+.+++ +.||+. |+++|-|+ + .++.+.+ +-...+ |+|+.+|.++.+++++. +++|
T Consensus 145 ~~~~~~~a~~~~-~~G~~~~KiKvG~~~~~d~~~v~avr~a~g~-~~~l~v-------DaN~~~~~~~a~~~~~~-l~~~ 214 (372)
T 3cyj_A 145 LRRLQEQLGGWA-AAGIPRVKMKVGREPEKDPERVRAAREAIGE-SVELMV-------DANGAYTRKQALYWAGA-FARE 214 (372)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECCSSGGGHHHHHHHHHHHHCT-TSEEEE-------ECTTCSCHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHH-HcCCCEEEEcCCCCHHHHHHHHHHHHHHhCC-CCeEEE-------ECCCCCCHHHHHHHHHH-HHhh
Confidence 477888888877 689996 88887554 2 1222211 123344 48999999999999887 6999
Q ss_pred -CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 102 -PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 102 -pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
+|.+||||+.++||++|++|+++++.++||++|| ++.+..+++++ .++++.++|||+|+||+||+++++++|+++|
T Consensus 215 ~~i~~iEqP~~~~d~~~~~~l~~~~~~~ipIa~dE-~~~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~~i~~~A~~~g 291 (372)
T 3cyj_A 215 AGISYLEEPVSSEDREGLRLLRDRGPGGVAIAAGE-YEWTLPQLHDL--AGCVDILQADVTRCGGITGLLRVDGICRGHQ 291 (372)
T ss_dssp HCCCEEECSSCTTCHHHHHHHHHHSCTTCEEEECT-TCCSHHHHHHH--HTTCSEEEECTTTTTHHHHHTTHHHHHHHHT
T ss_pred cCCcEEECCCCcccHHHHHHHHHhCCCCCCEECCC-CccCHHHHHHH--hCCCCEEecCchhhCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999984338999999 56777888887 8999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCchhHhhhhhhcc
Q 040341 181 WGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 181 ~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
+.+|+++. ...-++||.++.
T Consensus 292 i~~~~~~~-----~~a~lhlaaa~~ 311 (372)
T 3cyj_A 292 IPFSAHCA-----PAVSAHACCAVE 311 (372)
T ss_dssp CCEEECSC-----HHHHHHHGGGCT
T ss_pred Ceecccch-----HHHHHHHHHhCC
Confidence 99999986 123445554443
No 26
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=99.84 E-value=1.2e-20 Score=178.24 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=137.0
Q ss_pred CCCc-HHHHHHHHHHHHhcCCcc-ceeeeeeh----h----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQES-YEGFELLKTAIAKGGYIG-KIVIGMDV----A----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~-eeal~~i~~Ai~~aGy~~-kI~iglD~----A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++ ++..+.+.+++ ++||+. ||++|-|+ + .++.+.+ .+.+. .|+|+.+|.+|.+++++.
T Consensus 182 ~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~d~e~v~avR~avG~---d~~l~-----vDan~~~~~~eai~~~~~- 251 (428)
T 3bjs_A 182 GYQPKESLAEEAQEYI-ARGYKALKLRIGDAARVDIERVRHVRKVLGD---EVDIL-----TDANTAYTMADARRVLPV- 251 (428)
T ss_dssp CSCCHHHHHHHHHHHH-HHTCSEEEEECCSCHHHHHHHHHHHHHHHCT---TSEEE-----EECTTCCCHHHHHHHHHH-
T ss_pred CCChHHHHHHHHHHHH-HCCCCEEEECCCCCHHHHHHHHHHHHHhcCC---CCEEE-----EECCCCCCHHHHHHHHHH-
Confidence 3567 88888888877 689996 89888433 2 2222211 23332 247899999999998887
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCc-eEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRH-VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~-~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
+++|+|.+||||+.++|+++|++|++++ + +||++|| +++++.++++.++.++++.++|||+|+||+||+++++++|
T Consensus 252 L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A 328 (428)
T 3bjs_A 252 LAEIQAGWLEEPFACNDFASYREVAKIT--PLVPIAAGE-NHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMA 328 (428)
T ss_dssp HHHTTCSCEECCSCTTCHHHHHHHTTTC--SSSCEEECT-TCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCccCHHHHHHHHHhC--CCCcEEcCC-CcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHH
Confidence 6999999999999999999999999998 6 9999999 5788999999999999999999999999999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhH--hhhhhhccc
Q 040341 177 KRAGWGVMASHRSGETEDTFI--ADLSVGLAT 206 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~i--adLAva~~~ 206 (251)
+++|+.+|++ +.||.+++. +|||+++..
T Consensus 329 ~~~gi~~~~~--~~es~i~~~a~~hlaaa~~~ 358 (428)
T 3bjs_A 329 SAYRIPINAH--SSATGLNHAATIHFLAATEN 358 (428)
T ss_dssp HHTTCCBCCB--CCSSHHHHHHHHHHHHHCTT
T ss_pred HHcCCeEEec--CCCcHHHHHHHHHHHHhCCC
Confidence 9999999999 689999887 566666653
No 27
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.84 E-value=2.1e-20 Score=172.96 Aligned_cols=167 Identities=17% Similarity=0.229 Sum_probs=136.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh----hhhcccccCCc-ceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDV----AASEFYDSKDK-TYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~----Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
..++++..+.+.+++ ++||+. ||++|-|+ +.-+..++.-| .+.+. .|+|+.+|.+|.+++++.|.++|
T Consensus 144 ~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~-----vDan~~~~~~~a~~~~~~l~~~~ 217 (371)
T 2ps2_A 144 VGEPEDMRARVAKYR-AKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFI-----VDANGKLSVETALRLLRLLPHGL 217 (371)
T ss_dssp SCCHHHHHHHHHHHH-TTTCCEEEEECCSCHHHHHHHHHHHTTTCCTTCEEE-----EECTTBCCHHHHHHHHHHSCTTC
T ss_pred CCCHHHHHHHHHHHH-HhChheEEeecCCCHHHHHHHHHHHHHhcCCCCEEE-----EECCCCcCHHHHHHHHHHHHhhc
Confidence 357888888888877 799996 89887554 21111222111 23332 24789999999999888854999
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW 181 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~ 181 (251)
++ +||||+. ||++|++|++++ ++||++|| +++++++++++++.++++.++||++++||+|++++++++|+++|+
T Consensus 218 ~i-~iE~P~~--~~~~~~~l~~~~--~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 291 (371)
T 2ps2_A 218 DF-ALEAPCA--TWRECISLRRKT--DIPIIYDE-LATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGY 291 (371)
T ss_dssp CC-EEECCBS--SHHHHHHHHTTC--CSCEEEST-TCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTC
T ss_pred CC-cCcCCcC--CHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCC
Confidence 99 9999998 999999999998 79999999 689999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCchhHhhhhhhcccC
Q 040341 182 GVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 182 ~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
.+|++|++ ||.....+.+.++...+
T Consensus 292 ~~~~~~~~-es~i~~aa~~hlaa~~~ 316 (371)
T 2ps2_A 292 SVSVQETC-GSDIAFAAIVHLAQTIP 316 (371)
T ss_dssp EEEEECSS-CCHHHHHHHHHHHTTSC
T ss_pred eEEecCCC-cCHHHHHHHHHHHHhCC
Confidence 99999986 88887777666664443
No 28
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=99.84 E-value=1.6e-20 Score=174.70 Aligned_cols=165 Identities=15% Similarity=0.177 Sum_probs=140.0
Q ss_pred CCc---HHHHHHHHHHHHhcCCcc-ceeeee-eh----h----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHH
Q 040341 29 QES---YEGFELLKTAIAKGGYIG-KIVIGM-DV----A----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYR 95 (251)
Q Consensus 29 ~~~---eeal~~i~~Ai~~aGy~~-kI~igl-D~----A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~ 95 (251)
.++ ++..+.+.+++ ++||+. ||++|- |+ + .++.+.+ .+.+. .|+|+.+|.+|.+++++
T Consensus 135 ~~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~---d~~l~-----vDan~~~~~~~a~~~~~ 205 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQL-KKGFEQIKVKIGGTSFKEDVRHINALQHTAGS---SITMI-----LDANQSYDAAAAFKWER 205 (382)
T ss_dssp SSTTHHHHHHHHHHHHH-TTTCCEEEEECSSSCHHHHHHHHHHHHHHHCT---TSEEE-----EECTTCCCHHHHHTTHH
T ss_pred CCcccHHHHHHHHHHHH-HcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCC---CCEEE-----EECCCCCCHHHHHHHHH
Confidence 566 88888888877 789997 888875 32 2 2222311 23332 24789999999999887
Q ss_pred HhhhcC-CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 96 SFISDH-PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 96 ~l~~~y-pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
. +++| +|.+||||+.++||++|++|++++ ++||++|| +++++.++++.++.++++.+++|++++||+|+++++++
T Consensus 206 ~-l~~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 281 (382)
T 2gdq_A 206 Y-FSEWTNIGWLEEPLPFDQPQDYAMLRSRL--SVPVAGGE-NMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQ 281 (382)
T ss_dssp H-HTTCSCEEEEECCSCSSCHHHHHHHHTTC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred H-HhhccCCeEEECCCCcccHHHHHHHHhhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHH
Confidence 7 6999 999999999999999999999998 79999999 67889999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhcccCc
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
+|+++|+.+|++ +.||..++.++++++...+.
T Consensus 282 ~A~~~g~~~~~~--~~es~i~~~a~l~laa~~~~ 313 (382)
T 2gdq_A 282 LARYFGVRASAH--AYDGSLSRLYALFAQACLPP 313 (382)
T ss_dssp HHHHHTCEECCC--CSSCSHHHHHHHHHHHTSCC
T ss_pred HHHHcCCEEeec--CCCcHHHHHHHHHHHHhCch
Confidence 999999999999 68999999999998776653
No 29
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=99.84 E-value=2.3e-20 Score=171.11 Aligned_cols=168 Identities=17% Similarity=0.218 Sum_probs=137.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
..++++..+.+.+++ ++||+. ||++|-|. +.-+..++....+.+. .|+|+.+|.+|.+++.+. +++|+
T Consensus 137 ~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~d~~~v~avr~~g~~~~l~-----vDan~~~~~~~a~~~~~~-l~~~~ 209 (345)
T 2zad_A 137 IDTVENRVKEAKKIF-EEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYI-----VDANMGYTQKEAVEFARA-VYQKG 209 (345)
T ss_dssp SCCHHHHHHHHHHHH-HTTCSEEEEECCSCHHHHHHHHHHHHHHSTTCEEE-----EECTTCSCHHHHHHHHHH-HHHTT
T ss_pred CCCHHHHHHHHHHHH-HcCcCEEEEeecCCHHHHHHHHHHHHhhCCCCeEE-----EECCCCCCHHHHHHHHHH-HHhcC
Confidence 457888888888877 689996 89887543 2111111110123332 247899999999998877 69999
Q ss_pred ce--eecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 103 IV--SIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 103 I~--~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
|. +||||+.++||++|++|++++ ++||++|| +++++.++++.++.++++.+++||++ ||+|++++++++|+++|
T Consensus 210 i~~~~iE~P~~~~~~~~~~~l~~~~--~ipia~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g 285 (345)
T 2zad_A 210 IDIAVYEQPVRREDIEGLKFVRFHS--PFPVAADE-SARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSG 285 (345)
T ss_dssp CCCSEEECCSCTTCHHHHHHHHHHS--SSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTT
T ss_pred CCeeeeeCCCCcccHHHHHHHHHhC--CCCEEEeC-CcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcC
Confidence 99 999999999999999999998 79999999 68899999999999999999999999 99999999999999999
Q ss_pred CcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 181 WGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 181 ~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
+.+|++++ .||.....+.+.++...+
T Consensus 286 ~~~~~~~~-~es~i~~aa~~hlaa~~~ 311 (345)
T 2zad_A 286 LKLMIGCM-GESSLGINQSVHFALGTG 311 (345)
T ss_dssp CEEEECCS-SCCHHHHHHHHHHHHHHC
T ss_pred CeEEEecC-cccHHHHHHHHHHHHcCC
Confidence 99999998 799887776666654443
No 30
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=99.83 E-value=2.2e-20 Score=174.80 Aligned_cols=159 Identities=18% Similarity=0.279 Sum_probs=133.2
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeee-e----hhh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGM-D----VAA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
++++..+.+.+++ ++||+. ||++|- + ++. ++.+.+ .+.+. .|+|+.+|.+|.+++++. ++
T Consensus 175 ~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~---d~~l~-----vDan~~~~~~~ai~~~~~-l~ 244 (398)
T 2pp0_A 175 PLDQVLKNVVISR-ENGIGGIKLKVGQPNCAEDIRRLTAVREALGD---EFPLM-----VDANQQWDRETAIRMGRK-ME 244 (398)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECCCSCHHHHHHHHHHHHHHHCS---SSCEE-----EECTTCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHH-HhCCCeEEEecCCCCHHHHHHHHHHHHHHcCC---CCeEE-----EECCCCCCHHHHHHHHHH-HH
Confidence 6788888888887 789997 888874 2 222 222211 23222 247889999999998887 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|+|.+||||+.++||++|++|++++ ++||++|| +++++.+++++++.++++.++||++|+||+||+++++++|+++
T Consensus 245 ~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~ 321 (398)
T 2pp0_A 245 QFNLIWIEEPLDAYDIEGHAQLAAAL--DTPIATGE-MLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKH 321 (398)
T ss_dssp GGTCSCEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHT
T ss_pred HcCCceeeCCCChhhHHHHHHHHhhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999 79999999 6789999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|+.+|+ |+++|+ .+|||+++..
T Consensus 322 gi~~~~-h~~~~~----~~~laaa~~~ 343 (398)
T 2pp0_A 322 GRKLAP-HFAMEV----HLHLSAAYPL 343 (398)
T ss_dssp TCEECC-CSCHHH----HHHHHHTCSS
T ss_pred CCeEee-cCccHH----HHHHHhcCCC
Confidence 999884 666664 7899988764
No 31
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=99.83 E-value=2.9e-20 Score=173.30 Aligned_cols=168 Identities=17% Similarity=0.151 Sum_probs=134.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcCCcc-ceeeeee----------------------hh----hhcccccCCcceeecCCC
Q 040341 24 FAPNIQESYEGFELLKTAIAKGGYIG-KIVIGMD----------------------VA----ASEFYDSKDKTYDLNFKE 76 (251)
Q Consensus 24 fap~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD----------------------~A----ase~~~~~~g~Y~l~~~~ 76 (251)
+..+..++++..+.+.+++ ++||+. ||++|-+ ++ .++.+.+ .+.+.
T Consensus 131 ~~~~~~~~~~~~~~a~~~~-~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~---d~~l~--- 203 (392)
T 2poz_A 131 WYGAADTPDEFARAVERPL-KEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGP---EIELM--- 203 (392)
T ss_dssp CCTTCCSHHHHHHHTHHHH-HTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCT---TSEEE---
T ss_pred cccCCCCHHHHHHHHHHHH-HcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCC---CCEEE---
Confidence 3333567888888888887 689996 8887721 11 1221211 23332
Q ss_pred CCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCccee
Q 040341 77 ENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNAL 156 (251)
Q Consensus 77 ~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~i 156 (251)
.|+|+.+|.+|.+++++. +++|+|.+||||+.++||++|++|++++ ++||++|| .++++.++++.++.++++.+
T Consensus 204 --vD~n~~~~~~~a~~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v 277 (392)
T 2poz_A 204 --VDLSGGLTTDETIRFCRK-IGELDICFVEEPCDPFDNGALKVISEQI--PLPIAVGE-RVYTRFGFRKIFELQACGII 277 (392)
T ss_dssp --EECTTCSCHHHHHHHHHH-HGGGCEEEEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCHHHHHHHHHTTTCCSEE
T ss_pred --EECCCCCCHHHHHHHHHH-HHhcCCCEEECCCCcccHHHHHHHHhhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEE
Confidence 247889999999998887 6999999999999999999999999998 79999999 56779999999999999999
Q ss_pred EeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 157 LLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 157 lIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+||++|+||+||+++++++|+++|+.+|+++ ++ |.....+.+.++...
T Consensus 278 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~-~~-s~i~~aa~~hlaaa~ 325 (392)
T 2poz_A 278 QPDIGTAGGLMETKKICAMAEAYNMRVAPHV-CG-SSLIETATLQLEANI 325 (392)
T ss_dssp CCCTTTSSCHHHHHHHHHHHHTTTCEECCCC-CS-SHHHHHHHHHHHHHC
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCeEecCC-CC-CHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999955 56 777666655555433
No 32
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.83 E-value=4.4e-20 Score=171.26 Aligned_cols=162 Identities=19% Similarity=0.239 Sum_probs=134.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-------eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHH
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-------DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLK 91 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-------D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~eli 91 (251)
..++++..+.+.+++ ++||+. ||++|- ++ +.++.+.+ .+.+. .|+|+.+|.+|.+
T Consensus 147 ~~~~e~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~---d~~l~-----vDan~~~~~~~a~ 217 (382)
T 1rvk_A 147 LATPEDYGRFAETLV-KRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGP---DIRLM-----IDAFHWYSRTDAL 217 (382)
T ss_dssp TSSHHHHHHHHHHHH-HHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCT---TSEEE-----EECCTTCCHHHHH
T ss_pred CCCHHHHHHHHHHHH-HCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCC---CCeEE-----EECCCCCCHHHHH
Confidence 457788888888887 679996 888885 32 11222211 23332 2478899999999
Q ss_pred HHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHH
Q 040341 92 NVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIE 171 (251)
Q Consensus 92 d~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~ 171 (251)
++.+. +++|+|.+||||+.++||++|++|++++ ++||++||...||+.++++.++.++++.+++|++++||+|++++
T Consensus 218 ~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 294 (382)
T 1rvk_A 218 ALGRG-LEKLGFDWIEEPMDEQSLSSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALK 294 (382)
T ss_dssp HHHHH-HHTTTCSEEECCSCTTCHHHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHH-HHhcCCCEEeCCCChhhHHHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHH
Confidence 98776 6999999999999999999999999998 79999999544449999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 172 AVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 172 ~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
++++|+++|+.+|++ +.|+. .+|||+++..
T Consensus 295 i~~~A~~~g~~~~~~--~~~~~---~~~laaa~~~ 324 (382)
T 1rvk_A 295 TMHLAEAFGMECEVH--GNTAM---NLHVVAATKN 324 (382)
T ss_dssp HHHHHHHTTCCEEEC--CCSHH---HHHHHHHCSS
T ss_pred HHHHHHHcCCeEeec--CCCCH---HHHHHHhCCc
Confidence 999999999999999 56765 8999988764
No 33
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=99.83 E-value=5.8e-20 Score=170.33 Aligned_cols=171 Identities=18% Similarity=0.224 Sum_probs=142.5
Q ss_pred cCCCCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHH
Q 040341 25 APNIQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYR 95 (251)
Q Consensus 25 ap~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~ 95 (251)
...+.++++..+.+.+++ +.||+. |+++|.|. |.++.+.+ .-...+ |+|+.+|.++.+.+.+
T Consensus 135 ~~~~~~~e~~~~~a~~~~-~~G~~~~K~KvG~~~~~d~~~v~avR~~~g~-~~~l~v-------DaN~~~~~~~A~~~~~ 205 (368)
T 3q45_A 135 TVSIDEPHKMAADAVQIK-KNGFEIIKVKVGGSKELDVERIRMIREAAGD-SITLRI-------DANQGWSVETAIETLT 205 (368)
T ss_dssp EECSCCHHHHHHHHHHHH-HTTCSEEEEECCSCHHHHHHHHHHHHHHHCS-SSEEEE-------ECTTCBCHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHH-HcCCCeEEEEecCCHHHHHHHHHHHHHHhCC-CCeEEE-------ECCCCCChHHHHHHHH
Confidence 445678899999999988 789997 99998764 23333322 112333 4889999999989887
Q ss_pred HhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 96 SFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 96 ~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
. +++|+|.+||||+..+|++++++|++++ .+||++|| +++++.++++.++.++++.+++||+++|++|++++++++
T Consensus 206 ~-l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~ 281 (368)
T 3q45_A 206 L-LEPYNIQHCEEPVSRNLYTALPKIRQAC--RIPIMADE-SCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRL 281 (368)
T ss_dssp H-HGGGCCSCEECCBCGGGGGGHHHHHHTC--SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHH
T ss_pred H-HhhcCCCEEECCCChhHHHHHHHHHhhC--CCCEEEcC-CcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHH
Confidence 7 5999999999999999999999999998 79999999 789999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 176 SKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 176 a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
|+++|+.+|++++ .|+.....+.+.++...+..
T Consensus 282 A~~~gi~~~~~~~-~es~i~~aa~~hlaaa~p~~ 314 (368)
T 3q45_A 282 AEQAHMPVQVGGF-LESRLGFTAAAHVALVSKTI 314 (368)
T ss_dssp HHHTTCCEEECCS-SCCHHHHHHHHHHHTTCTTE
T ss_pred HHHcCCcEEecCc-cccHHHHHHHHHHHHcCCCC
Confidence 9999999999886 58877666666666544333
No 34
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=99.83 E-value=6.7e-20 Score=169.83 Aligned_cols=162 Identities=15% Similarity=0.233 Sum_probs=137.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMD-----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
.+.++++..+.+.+++ +.||+. |+++|.+ + +.++.+.+ -...++ +|+.+|.++.+.+.+.
T Consensus 140 ~~~~~e~~~~~a~~~~-~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~--~~l~vD-------aN~~~~~~~A~~~~~~ 209 (365)
T 3ik4_A 140 TAGDEVHAAASAKAIL-ARGIKSIKVKTAGVDVAYDLARLRAIHQAAPT--APLIVD-------GNCGYDVERALAFCAA 209 (365)
T ss_dssp CCSCHHHHHHHHHHHH-HTTCCCEEEECCSSCHHHHHHHHHHHHHHSSS--CCEEEE-------CTTCCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH-HcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCC--CeEEEE-------CCCCCCHHHHHHHHHH
Confidence 4578899999999988 689997 9998865 2 33444433 234444 8999999998887776
Q ss_pred hh--hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 97 FI--SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 97 l~--~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+ ++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++||++ ||+|+++++++
T Consensus 210 -L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~ 284 (365)
T 3ik4_A 210 -CKAESIPMVLFEQPLPREDWAGMAQVTAQS--GFAVAADE-SARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIA 284 (365)
T ss_dssp -HHHTTCCEEEEECCSCTTCHHHHHHHHHHS--SSCEEEST-TCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHH
T ss_pred -HhhCCCCceEEECCCCcccHHHHHHHHhhC--CCCEEECC-CCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHH
Confidence 6 789999999999999999999999998 79999999 68999999999999999999999999 99999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+|+++|+.+|++++ .||.....+.+.++.
T Consensus 285 ~A~~~gi~~~~~~~-~es~ig~aa~~hlaa 313 (365)
T 3ik4_A 285 IAQAAGLGLMIGGM-VESILAMSFSANLAA 313 (365)
T ss_dssp HHHHHTCEEEECCS-SCCHHHHHHHHHHHH
T ss_pred HHHHcCCeEEecCC-cccHHHHHHHHHHHH
Confidence 99999999999986 477666655555554
No 35
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=99.83 E-value=9e-20 Score=170.35 Aligned_cols=169 Identities=17% Similarity=0.190 Sum_probs=140.6
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeee--eeh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIG--MDV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~ig--lD~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
++++..+.+.+++ +.||+. |++++ .|+ +.++.+++ -...+ |+|+.+|.++.+. .+. +++|+
T Consensus 149 ~~e~~~~~~~~~~-~~G~~~~K~Kv~~~~d~~~v~avR~~~~~--~~l~v-------DaN~~~~~~~A~~-~~~-l~~~~ 216 (388)
T 3qld_A 149 SLDVLIQSVDAAV-EQGFRRVKLKIAPGRDRAAIKAVRLRYPD--LAIAA-------DANGSYRPEDAPV-LRQ-LDAYD 216 (388)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEECBTTBSHHHHHHHHHHCTT--SEEEE-------ECTTCCCGGGHHH-HHH-GGGGC
T ss_pred CHHHHHHHHHHHH-HhCCCeEEEEeCcHHHHHHHHHHHHHCCC--CeEEE-------ECCCCCChHHHHH-HHH-HhhCC
Confidence 4899999999988 689996 77765 444 33444422 23344 4899999999764 655 69999
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCc
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~ 182 (251)
|.+||||+..+|++++++|++++ .+||++|| ++.++.++++.++.++++.+++||+++||+|++++++.+|+++|+.
T Consensus 217 i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 293 (388)
T 3qld_A 217 LQFIEQPLPEDDWFDLAKLQASL--RTPVCLDE-SVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMA 293 (388)
T ss_dssp CSCEECCSCTTCHHHHHHHHHHC--SSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred CcEEECCCCcccHHHHHHHHHhC--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCe
Confidence 99999999999999999999998 79999999 7899999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 183 ~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
+|++++ .||.....+.+.++....+..++++
T Consensus 294 ~~~~~~-~es~i~~aa~~~laa~~~~~~~~~~ 324 (388)
T 3qld_A 294 AWVGGM-YETGVGRVHGLIAAALPLMRYATDL 324 (388)
T ss_dssp EEECCC-CCCHHHHHHHHHHHTSTTBCSCBSC
T ss_pred EEecCc-cchHHHHHHHHHHHcCCCCCccccc
Confidence 999986 6888888888888775554444444
No 36
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=99.83 E-value=6.5e-20 Score=171.24 Aligned_cols=161 Identities=16% Similarity=0.076 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHhcCCcc-ceeeee---------eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHH
Q 040341 32 YEGFELLKTAIAKGGYIG-KIVIGM---------DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNV 93 (251)
Q Consensus 32 eeal~~i~~Ai~~aGy~~-kI~igl---------D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~ 93 (251)
++..+.+.+++ ++||+. ||++|- ++ +.++.+.+ .+.+. .|+|+.+|.+|.+++
T Consensus 150 e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~---d~~l~-----vDan~~~~~~~ai~~ 220 (392)
T 3p3b_A 150 ALMQEEAMQGY-AKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGP---AGKIM-----IDANNAYNLNLTKEV 220 (392)
T ss_dssp HHHHHHHHHHH-HTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCT---TCCEE-----EECTTCCCHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCC---CCeEE-----EECCCCCCHHHHHHH
Confidence 78888888877 789996 888875 22 22232211 23222 247889999999998
Q ss_pred HHHhhhcCCceeecCCCCcccHHHHHHHHhhh---CCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHH
Q 040341 94 YRSFISDHPIVSIEDPFDQDDWEHHAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 170 (251)
Q Consensus 94 ~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~l---g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l 170 (251)
++. +++|+|.+||||+. +|+++|++|++++ |.++||++|| ++++.++++.++.++++.+++|++++ |+|+++
T Consensus 221 ~~~-l~~~~i~~iE~P~~-~d~~~~~~l~~~l~~~g~~iPIa~dE--~~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~ 295 (392)
T 3p3b_A 221 LAA-LSDVNLYWLEEAFH-EDEALYEDLKEWLGQRGQNVLIADGE--GLASPHLIEWATRGRVDVLQYDIIWP-GFTHWM 295 (392)
T ss_dssp HHH-TTTSCEEEEECSSS-CCHHHHHHHHHHHHHHTCCCEEEECC--SSCCTTHHHHHHTTSCCEECCBTTTB-CHHHHH
T ss_pred HHH-HHhcCCCEEecCCc-ccHHHHHHHHHhhccCCCCccEEecC--CCCHHHHHHHHHcCCCCEEEeCcccc-CHHHHH
Confidence 887 69999999999999 9999999999982 1279999999 79999999999999999999999999 999999
Q ss_pred HHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCc
Q 040341 171 EAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
+++++|+++|+.+|++ +.||.+.+.++++++...+.
T Consensus 296 ~i~~~A~~~gi~~~~h--~~es~i~~~a~l~laa~~~~ 331 (392)
T 3p3b_A 296 ELGEKLDAHGLRSAPH--CYGNAYGIYASGHLSAAVRN 331 (392)
T ss_dssp HHHHHHHHTTCEECCB--CCSCTHHHHHHHHHGGGCTT
T ss_pred HHHHHHHHcCCEEEec--CCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999995 79999999999999876654
No 37
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.82 E-value=1.2e-19 Score=169.18 Aligned_cols=164 Identities=15% Similarity=0.170 Sum_probs=135.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-h--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-V--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++..+.+.+++ ++||+. ||++|.| + +.++.+.+ .+.+. .|+|+.+|.+|.+++++.
T Consensus 147 ~~~~~~~~~~a~~~~-~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~---d~~l~-----vDan~~~~~~~a~~~~~~- 216 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFY-GKKYGGIKIYPMLDSLSISIQFVEKVREIVGD---ELPLM-----LDLAVPEDLDQTKSFLKE- 216 (391)
T ss_dssp CCCHHHHHHHHHHHH-HTTCSCEEECCCCSSHHHHHHHHHHHHHHHCS---SSCEE-----EECCCCSCHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEccCCChHHHHHHHHHHHHHHhCC---CCEEE-----EEcCCCCCHHHHHHHHHH-
Confidence 357788888888887 689997 8988765 2 11222211 23222 247889999999998887
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+.++||++|++|++++ ++||++|| .++++.++++.++.++++.++||++++||+|++++++++|+
T Consensus 217 l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~ 293 (391)
T 2qgy_A 217 VSSFNPYWIEEPVDGENISLLTEIKNTF--NMKVVTGE-KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEAS 293 (391)
T ss_dssp HGGGCCSEEECSSCTTCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHH
T ss_pred HHhcCCCeEeCCCChhhHHHHHHHHhhC--CCCEEEcC-CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHH
Confidence 6999999999999999999999999998 79999999 67889999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCC-CchhHhhhhhhccc
Q 040341 178 RAGWGVMASHRSGET-EDTFIADLSVGLAT 206 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt-~d~~iadLAva~~~ 206 (251)
++|+.+|+++. |+ .....+.+.++...
T Consensus 294 ~~gi~~~~~~~--~~~~i~~aa~~hlaaa~ 321 (391)
T 2qgy_A 294 NNGIFISPHCW--NSMSVSASAMLHVCSSI 321 (391)
T ss_dssp HTTCEECCBCC--SCTTHHHHHHHHHHHHC
T ss_pred HCCCEEeccCC--CCcHHHHHHHHHHHHhC
Confidence 99999999986 66 77666655554443
No 38
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=99.82 E-value=4.5e-20 Score=173.97 Aligned_cols=118 Identities=13% Similarity=0.128 Sum_probs=104.9
Q ss_pred CCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee
Q 040341 80 DGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 159 (251)
Q Consensus 80 d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK 159 (251)
|+|+.+|.++++++++. +++|+|.+|||||.++||++|++|+++++.+++|++|| ++.|+.+++++++.+ ++.++||
T Consensus 228 DaN~~~~~~~Ai~~~~~-l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipIa~dE-~~~~~~~~~~~i~~~-~d~i~ik 304 (415)
T 2p3z_A 228 DCWMSQDVNYATKLAHA-CAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGE-HHGTLQSFRTLAETG-IDIMQPD 304 (415)
T ss_dssp ECTTCCCHHHHHHHHHH-HGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECT-TCCSHHHHHHHHHTT-CSEECCC
T ss_pred ECCCCCCHHHHHHHHHH-HhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcEEcCC-CCCCHHHHHHHHHcC-CCEEEeC
Confidence 48899999999999988 69999999999999999999999999995449999999 567999999999999 9999999
Q ss_pred ccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 160 VNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 160 ~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
++|+||+||+++++++|+++|+.+|+ |+++ ...+|||.++.
T Consensus 305 ~~~~GGitea~~ia~lA~~~gi~v~~-h~~~----~a~~hlaaa~p 345 (415)
T 2p3z_A 305 VGWCGGLTTLVEIAALAKSRGQLVVP-HGSS----VYSHHAVITFT 345 (415)
T ss_dssp HHHHTCHHHHHHHHHHHHHTTCCBCC-CCCH----HHHHHHHTTCT
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEe-cChH----HHHHHHHHhCC
Confidence 99999999999999999999999998 5442 23467776554
No 39
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.82 E-value=2.3e-19 Score=166.82 Aligned_cols=166 Identities=18% Similarity=0.141 Sum_probs=135.4
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeeeeh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCc
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGMDV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPI 103 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~iglD~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI 103 (251)
.++++..+.+.+++ ++||+. ||++|-++ +.-+..++.-|.+.+. .|+|+.+|.+|.+++.+. +++|+|
T Consensus 146 ~~~e~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~e~v~avr~a~gd~~l~-----vD~n~~~~~~~a~~~~~~-l~~~~i 218 (384)
T 2pgw_A 146 ETAEELARDAAVGH-AQGERVFYLKVGRGEKLDLEITAAVRGEIGDARLR-----LDANEGWSVHDAINMCRK-LEKYDI 218 (384)
T ss_dssp SSHHHHHHHHHHHH-HTTCCEEEEECCSCHHHHHHHHHHHHTTSTTCEEE-----EECTTCCCHHHHHHHHHH-HGGGCC
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEECcCCCHHHHHHHHHHHHHHcCCcEEE-----EecCCCCCHHHHHHHHHH-HHhcCC
Confidence 57788888888877 689997 88887433 2222222211223332 147889999999997775 699999
Q ss_pred eeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE
Q 040341 104 VSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV 183 (251)
Q Consensus 104 ~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ 183 (251)
.+||||+..+||++|++|++++ ++||++|| .++++++++++++.++++.++||++++|++|++++++++|+++|+.+
T Consensus 219 ~~iEqP~~~~~~~~~~~l~~~~--~iPI~~de-~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~ 295 (384)
T 2pgw_A 219 EFIEQPTVSWSIPAMAHVREKV--GIPIVADQ-AAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKI 295 (384)
T ss_dssp SEEECCSCTTCHHHHHHHHHHC--SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCE
T ss_pred CEEeCCCChhhHHHHHHHHhhC--CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeE
Confidence 9999999999999999999998 79999999 68899999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCchhHhhhhhhcc
Q 040341 184 MASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 184 ivs~rsgEt~d~~iadLAva~~ 205 (251)
|+++ +.||.....+.+.++..
T Consensus 296 ~~~~-~~es~i~~aa~~hlaaa 316 (384)
T 2pgw_A 296 CIHS-SFTTGITTCAEHHIGLA 316 (384)
T ss_dssp EECC-CSCCHHHHHHHHHHHHH
T ss_pred eecc-CcCCHHHHHHHHHHHHh
Confidence 9996 48998877655555543
No 40
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=99.82 E-value=1e-19 Score=170.09 Aligned_cols=162 Identities=18% Similarity=0.284 Sum_probs=137.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMD-----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
.+.++++..+.+.+++ +.||+. ||++|.+ + +.++.+.+ ....+ |+|+.+|.++.+.+.+.
T Consensus 141 ~~~~~e~~~~~a~~~~-~~G~~~iKlKvg~~~~~~d~~~v~avR~~~~~--~~L~v-------DaN~~w~~~~A~~~~~~ 210 (389)
T 3s5s_A 141 TTGSPERAEEAARRAA-AMGFRALKVKVGGRLAASDPARIEAIHAAAPG--ASLIL-------DGNGGLTAGEALALVAH 210 (389)
T ss_dssp CSSCSHHHHHHHHHHH-HHTCCEEEEECCGGGTTTHHHHHHHHHHHCTT--CEEEE-------ECTTCSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH-HcCCCeEEEEecCCChHHHHHHHHHHHHhCCC--CeEEE-------ECCCCCCHHHHHHHHHH
Confidence 4678899999999988 589997 9998865 2 33444433 23444 48999999999888777
Q ss_pred hh--hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 97 FI--SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 97 l~--~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+ ++|+|.+||||+..+|+++++.|++++ .++|++|| +++++.++++.++.++++.+++||++ ||+|+++++++
T Consensus 211 -L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-s~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~ 285 (389)
T 3s5s_A 211 -ARRLGADVALLEQPVPRDDWDGMKEVTRRA--GVDVAADE-SAASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAA 285 (389)
T ss_dssp -HHHTTCEEEEEECCSCTTCHHHHHHHHHHS--SSCEEEST-TCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHH
T ss_pred -HhhCCCCeEEEECCCCcccHHHHHHHHhhC--CCCEEECC-CCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHH
Confidence 6 789999999999999999999999998 79999999 78999999999999999999999999 99999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+|+++|+.+|++++ .||.....+.+.++.
T Consensus 286 ~A~~~gi~~~~~~~-~es~ig~aa~~hlaa 314 (389)
T 3s5s_A 286 VARAAGLGLMIGGM-VESVLAMTASACFAA 314 (389)
T ss_dssp HHHHTTCEEEECCS-SCCHHHHHHHHHHHH
T ss_pred HHHHcCCeEEecCC-cccHHHHHHHHHHHh
Confidence 99999999999886 577666555555544
No 41
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.82 E-value=1.3e-19 Score=169.31 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=136.3
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
.++++..+.+.+++ ++||+. ||++|-|+ +.++.+.+ .+.+. .|+|+.+|.+|.+++.+. ++
T Consensus 144 ~~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~~e~v~avR~a~g~---d~~l~-----vDan~~~~~~~a~~~~~~-l~ 213 (397)
T 2qde_A 144 GEPEAVAEEALAVL-REGFHFVKLKAGGPLKADIAMVAEVRRAVGD---DVDLF-----IDINGAWTYDQALTTIRA-LE 213 (397)
T ss_dssp SCHHHHHHHHHHHH-HHTCSCEEEECCSCHHHHHHHHHHHHHHHCT---TSCEE-----EECTTCCCHHHHHHHHHH-HG
T ss_pred CCHHHHHHHHHHHH-HhhhhheeecccCCHHHHHHHHHHHHHhhCC---CCEEE-----EECCCCCCHHHHHHHHHH-HH
Confidence 56788888888887 679997 89887553 12222211 23222 247889999999998776 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|+|.+||||+.++||++|++|++++ ++||++|| +++++.++++.++.++++.++|||+++||+|++++++++|+++
T Consensus 214 ~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 290 (397)
T 2qde_A 214 KYNLSKIEQPLPAWDLDGMARLRGKV--ATPIYADE-SAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLA 290 (397)
T ss_dssp GGCCSCEECCSCTTCHHHHHHHHTTC--SSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHH
T ss_pred hCCCCEEECCCChhhHHHHHHHHhhC--CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999998 79999999 6788999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
|+.+|++++ .|+.....+.+.++...+
T Consensus 291 g~~~~~~~~-~es~ig~aa~~hlaa~~~ 317 (397)
T 2qde_A 291 NLPVICGCM-VGSGLEASPAAHLLAAND 317 (397)
T ss_dssp TCCEEECCC-SCCHHHHHHHHHHHHHCT
T ss_pred CCeEEEecC-cccHHHHHHHHHHHHhCC
Confidence 999999986 578777766666655443
No 42
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=99.82 E-value=1.9e-19 Score=167.75 Aligned_cols=169 Identities=17% Similarity=0.195 Sum_probs=139.8
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeee-eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGM-DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
...++++.++.+.+++++.||+. |+++|. |+ |.++.+.+ ...|. .|+|+.+|.++.+.+.+.
T Consensus 145 ~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~---~~~l~-----vDan~~~~~~~A~~~~~~ 216 (383)
T 3i4k_A 145 GVLPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGD---RVSLR-----IDINARWDRRTALHYLPI 216 (383)
T ss_dssp CSCCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTT---TSEEE-----EECTTCSCHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCC---CCEEE-----EECCCCCCHHHHHHHHHH
Confidence 45678999999999885559997 999876 33 22333322 23332 247899999998887776
Q ss_pred hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 97 FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 97 l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
+++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|
T Consensus 217 -l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A 292 (383)
T 3i4k_A 217 -LAEAGVELFEQPTPADDLETLREITRRT--NVSVMADE-SVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIA 292 (383)
T ss_dssp -HHHTTCCEEESCSCTTCHHHHHHHHHHH--CCEEEEST-TCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHH
T ss_pred -HHhcCCCEEECCCChhhHHHHHHHHhhC--CCCEEecC-ccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHH
Confidence 6999999999999999999999999999 79999999 7899999999999999999999999999999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhHhhhhhhcccCc
Q 040341 177 KRAGWGVMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
+++|+.+|++++ -|+.....+.+.++...+.
T Consensus 293 ~~~gi~~~~~~~-~es~i~~aa~~hlaaa~p~ 323 (383)
T 3i4k_A 293 EAGGLACHGATS-LEGPIGTAASLQFAASTKA 323 (383)
T ss_dssp HHTTCEEEECCS-CCCHHHHHHHHHHHHHCTT
T ss_pred HHcCCeEEeCCC-CccHHHHHHHHHHHHcCCC
Confidence 999999999996 5787777666655544333
No 43
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.82 E-value=2.2e-19 Score=166.62 Aligned_cols=166 Identities=16% Similarity=0.128 Sum_probs=137.4
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeeeeh----hhhcccccCCc-ceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGMDV----AASEFYDSKDK-TYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~iglD~----Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
.++++..+.+.+++ ++||+. ||++|-|+ +.-+..++.-| .+.+. .|+|+.+|.+|.+++.+. +++|+
T Consensus 144 ~~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~-----vDan~~~~~~~a~~~~~~-l~~~~ 216 (379)
T 2rdx_A 144 RSEAETRAELARHR-AAGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAM-----ADANQGWRVDNAIRLARA-TRDLD 216 (379)
T ss_dssp SCSHHHHHHHHHHH-HTTCCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEE-----EECTTCSCHHHHHHHHHH-TTTSC
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEE-----EECCCCCCHHHHHHHHHH-HHhCC
Confidence 57788888888877 689996 88887433 22111121111 23333 247889999999998877 69999
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCc
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~ 182 (251)
+ +||||+. ||++|++|++++ ++||++|| ++++++++++.++.++++.++||++++||+|++++++++|+++|+.
T Consensus 217 i-~iE~P~~--~~~~~~~l~~~~--~iPI~~de-~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~ 290 (379)
T 2rdx_A 217 Y-ILEQPCR--SYEECQQVRRVA--DQPMKLDE-CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMP 290 (379)
T ss_dssp C-EEECCSS--SHHHHHHHHTTC--CSCEEECT-TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCC
T ss_pred e-EEeCCcC--CHHHHHHHHhhC--CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCe
Confidence 9 9999998 999999999998 79999999 7899999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCchhHhhhhhhcccCc
Q 040341 183 VMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 183 ~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
+|+++ +.||...+.+.+.++...+.
T Consensus 291 ~~~~~-~~es~i~~~a~~~laaa~~~ 315 (379)
T 2rdx_A 291 VVAED-SWGGEIASAAVAHFAASTPE 315 (379)
T ss_dssp EEEEC-SBCSHHHHHHHHHHHHTSCT
T ss_pred EEEee-ccCcHHHHHHHHHHHHcCCC
Confidence 99996 47999999988888765443
No 44
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=99.82 E-value=1.1e-19 Score=169.39 Aligned_cols=169 Identities=14% Similarity=0.155 Sum_probs=139.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++.++.+.+++++.||+. ||++|.+ + |.++.+.+ .-...+ |+|+.+|.++.+.+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~-~~~l~v-------DaN~~~~~~~A~~~~~~- 216 (382)
T 3dgb_A 146 SGDTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGD-SASVRV-------DVNQAWDEAVALRACRI- 216 (382)
T ss_dssp SSCHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGG-GSEEEE-------ECTTCBCHHHHHHHHHH-
T ss_pred CCChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCC-CCeEEE-------eCCCCCCHHHHHHHHHH-
Confidence 3467888888888887689997 9998853 2 22333322 012333 48999999998887776
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+..+||+++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++++|+
T Consensus 217 l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~ 293 (382)
T 3dgb_A 217 LGGNGIDLIEQPISRNNRAGMVRLNASS--PAPIMADE-SIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAE 293 (382)
T ss_dssp HHTTTCCCEECCBCTTCHHHHHHHHHHC--SSCEEEST-TCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred HhhcCcCeeeCCCCccCHHHHHHHHHhC--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHH
Confidence 6999999999999999999999999998 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
++|+.+|++++ .|+.....+.+.++.....+
T Consensus 294 ~~gi~~~~~~~-~es~ig~aa~~hlaaa~~~~ 324 (382)
T 3dgb_A 294 AAGIGLYGGTM-LEGGIGTLASAHAFLTLNKL 324 (382)
T ss_dssp HHTCEEEECCS-CCCHHHHHHHHHHHTTSSCC
T ss_pred HcCCeEeecCC-CccHHHHHHHHHHHHcCCCC
Confidence 99999999885 68877777776666544433
No 45
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.81 E-value=1.3e-19 Score=169.46 Aligned_cols=166 Identities=17% Similarity=0.192 Sum_probs=134.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-cee---eeeeh-----hhhcccccCCc-ceeecCCCCCCCCCCcc--ChhhHHHHHH
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIV---IGMDV-----AASEFYDSKDK-TYDLNFKEENNDGSQKV--SGDGLKNVYR 95 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~---iglD~-----Aase~~~~~~g-~Y~l~~~~~~~d~~~~~--s~~elid~~~ 95 (251)
..++++..+.+.+++ ++||+. ||+ +|-|+ +.-+..++.-| .+.+. .|+|+.+ |.+|.+++++
T Consensus 143 ~~~~~~~~~~a~~~~-~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~-----vDan~~~~~~~~~a~~~~~ 216 (401)
T 2hzg_A 143 GDTPQETLERARAAR-RDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLM-----VDVGQIFGEDVEAAAARLP 216 (401)
T ss_dssp CSSHHHHHHHHHHHH-HTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEE-----EECTTTTTTCHHHHHTTHH
T ss_pred CCCHHHHHHHHHHHH-HhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEE-----EECCCCCCCCHHHHHHHHH
Confidence 357788888888877 689996 888 66433 21111111001 23332 2478889 9999999888
Q ss_pred HhhhcCCceeecCCCCcccHHHHHHHHh-hhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 96 SFISDHPIVSIEDPFDQDDWEHHAELTG-KIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 96 ~l~~~ypI~~IEDP~~e~D~~~~~~l~~-~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
. +++|+|.+||||+.++||++|++|++ ++ ++||++|| .++++++++++++.++++.++||++|+||+|+++++++
T Consensus 217 ~-l~~~~i~~iEqP~~~~d~~~~~~l~~~~~--~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 292 (401)
T 2hzg_A 217 T-LDAAGVLWLEEPFDAGALAAHAALAGRGA--RVRIAGGE-AAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVAD 292 (401)
T ss_dssp H-HHHTTCSEEECCSCTTCHHHHHHHHTTCC--SSEEEECT-TCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHH
T ss_pred H-HHhcCCCEEECCCCccCHHHHHHHHhhCC--CCCEEecC-CcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHH
Confidence 7 69999999999999999999999999 88 79999999 57889999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
+|+++|+.+|+ | +.||.+++.+.+.++..
T Consensus 293 ~A~~~g~~~~~-h-~~es~i~~~a~~hlaaa 321 (401)
T 2hzg_A 293 AAQARGITYVN-H-TFTSHLALSASLQPFAG 321 (401)
T ss_dssp HHHHHTCEEEE-C-CCSCHHHHHHHHGGGTT
T ss_pred HHHHcCCEEec-C-CCCcHHHHHHHHHHHHh
Confidence 99999999884 5 79999998866665543
No 46
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.81 E-value=8.2e-20 Score=170.69 Aligned_cols=165 Identities=16% Similarity=0.109 Sum_probs=131.6
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceee------ee-----------------ehhhhcccccCC-cceeecCCCCCCCCCCc
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVI------GM-----------------DVAASEFYDSKD-KTYDLNFKEENNDGSQK 84 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~i------gl-----------------D~Aase~~~~~~-g~Y~l~~~~~~~d~~~~ 84 (251)
++++..+.+.+++ ++||+. ||++ |. |++.-+..++.- ..+.+. .|+|+.
T Consensus 146 ~~e~~~~~a~~~~-~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~-----vDan~~ 219 (403)
T 2ox4_A 146 RKEEYAEEALKAV-AEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDII-----VENHGH 219 (403)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEE-----EECTTC
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEE-----EECCCC
Confidence 7788888888887 689996 8876 43 221111111100 123332 247889
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 164 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiG 164 (251)
+|.+|++++++. +++|+|.+||||+.++||++|++|++++ ++||++|| .++++.+++++++.++++.+++|++|+|
T Consensus 220 ~~~~~ai~~~~~-l~~~~i~~iE~P~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~G 295 (403)
T 2ox4_A 220 TDLVSAIQFAKA-IEEFNIFFYEEINTPLNPRLLKEAKKKI--DIPLASGE-RIYSRWGFLPFLEDRSIDVIQPDLGTCG 295 (403)
T ss_dssp SCHHHHHHHHHH-HGGGCEEEEECCSCTTSTHHHHHHHHTC--CSCEEECT-TCCHHHHHHHHHHTTCCSEECCCHHHHT
T ss_pred CCHHHHHHHHHH-HHhhCCCEEeCCCChhhHHHHHHHHHhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEEecCccccC
Confidence 999999998887 6999999999999999999999999999 79999999 5677999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 165 SVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|+||+++++++|+++|+.+|+++ +. |.....+.+.++...
T Consensus 296 Gite~~~i~~~A~~~g~~~~~h~-~~-s~i~~aa~~hlaaa~ 335 (403)
T 2ox4_A 296 GFTEFKKIADMAHIFEVTVQAHV-AG-TGVAEAASLHAEIAI 335 (403)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCC-CS-CHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCEEeecC-CC-CHHHHHHHHHHHHhC
Confidence 99999999999999999999955 44 777766655555443
No 47
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=99.81 E-value=6.3e-20 Score=171.68 Aligned_cols=165 Identities=13% Similarity=0.079 Sum_probs=131.9
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceee------ee-----------------ehhhhcccccCC-cceeecCCCCCCCCCCc
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVI------GM-----------------DVAASEFYDSKD-KTYDLNFKEENNDGSQK 84 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~i------gl-----------------D~Aase~~~~~~-g~Y~l~~~~~~~d~~~~ 84 (251)
++++..+.+.+++ ++||+. ||++ |- |++.-+..++.- ..+.+. .|+|+.
T Consensus 152 ~~~~~~~~a~~~~-~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~-----vDan~~ 225 (407)
T 2o56_A 152 EPEQYAQAALTAV-SEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDII-----AEMHAF 225 (407)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEE-----EECTTC
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEE-----EECCCC
Confidence 6788888888887 689996 8876 43 221111111100 123332 247889
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 164 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiG 164 (251)
+|.+|.+++++. +++|+|.+||||+.++||++|++|++++ ++||++|| .++++.++++.++.++++.+++|++|+|
T Consensus 226 ~~~~~a~~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~G 301 (407)
T 2o56_A 226 TDTTSAIQFGRM-IEELGIFYYEEPVMPLNPAQMKQVADKV--NIPLAAGE-RIYWRWGYRPFLENGSLSVIQPDICTCG 301 (407)
T ss_dssp SCHHHHHHHHHH-HGGGCCSCEECSSCSSSHHHHHHHHHHC--CSCEEECT-TCCHHHHHHHHHHTTCCSEECCCTTTTT
T ss_pred CCHHHHHHHHHH-HHhcCCCEEeCCCChhhHHHHHHHHHhC--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEecCccccC
Confidence 999999998887 6999999999999999999999999999 79999999 5789999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 165 SVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|+||+++++++|+++|+.+|+++. . |.....+.+.++...
T Consensus 302 Gite~~~i~~~A~~~g~~~~~h~~-~-s~i~~aa~~hlaaa~ 341 (407)
T 2o56_A 302 GITEVKKICDMAHVYDKTVQIHVC-G-GPISTAVALHMETAI 341 (407)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCC-S-CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCeEeecCC-C-CHHHHHHHHHHHHhC
Confidence 999999999999999999999554 4 777666655554433
No 48
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.81 E-value=8.3e-20 Score=171.23 Aligned_cols=162 Identities=14% Similarity=0.158 Sum_probs=131.0
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceee----ee-----------------ehhh----hcccccCCcceeecCCCCCCCCCC
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVI----GM-----------------DVAA----SEFYDSKDKTYDLNFKEENNDGSQ 83 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~i----gl-----------------D~Aa----se~~~~~~g~Y~l~~~~~~~d~~~ 83 (251)
++++..+.+.+++ ++||+. |+++ |. |++. ++.+.+ .+.+. .|+|+
T Consensus 149 ~~~~~~~~a~~~~-~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~---d~~l~-----vDan~ 219 (410)
T 2qq6_A 149 SNEEYIAVAREAV-ERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGP---EVEVA-----IDMHG 219 (410)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCS---SSEEE-----EECTT
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCC---CCEEE-----EECCC
Confidence 5678888888877 689996 8887 53 2211 222211 23332 24788
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.+|.+|.+++++. +++|+|.+||||+.++||++|++|++++ ++||++|| +++|+.++++.++.++++.+++|++|+
T Consensus 220 ~~~~~~a~~~~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~ 295 (410)
T 2qq6_A 220 RFDIPSSIRFARA-MEPFGLLWLEEPTPPENLDALAEVRRST--STPICAGE-NVYTRFDFRELFAKRAVDYVMPDVAKC 295 (410)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSEEECCSCTTCHHHHHHHHTTC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCBHHHH
T ss_pred CCCHHHHHHHHHH-HhhcCCCeEECCCChhhHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEecCcccc
Confidence 9999999998877 6999999999999999999999999998 79999999 578999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
||+||+++++++|+++|+.+|+++ +. +.....+.+.++...
T Consensus 296 GGite~~~ia~~A~~~g~~~~~h~-~~-s~i~~aa~~hlaaa~ 336 (410)
T 2qq6_A 296 GGLAEAKRIANLAELDYIPFAPHN-VS-SPVGTVAAAHVCAAV 336 (410)
T ss_dssp THHHHHHHHHHHHHTTTCCBCCBC-CS-CHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHcCCeEeecC-CC-cHHHHHHHHHHHHhC
Confidence 999999999999999999999954 44 776666555554433
No 49
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=99.81 E-value=1.1e-19 Score=167.57 Aligned_cols=167 Identities=20% Similarity=0.239 Sum_probs=139.0
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
.+.++++..+.+.+++ +.||+. |+++|.|+ |.++.+.+ .-...+ |+|+.+|.++.+.+.+.
T Consensus 137 ~~~~~~~~~~~a~~~~-~~G~~~~K~K~G~~~~~d~~~v~avR~~~g~-~~~l~v-------Dan~~~~~~~a~~~~~~- 206 (356)
T 3ro6_B 137 GIKPVEETLAEAREHL-ALGFRVLKVKLCGDEEQDFERLRRLHETLAG-RAVVRV-------DPNQSYDRDGLLRLDRL- 206 (356)
T ss_dssp CSCCHHHHHHHHHHHH-HTTCCEEEEECCSCHHHHHHHHHHHHHHHTT-SSEEEE-------ECTTCCCHHHHHHHHHH-
T ss_pred cCCCHHHHHHHHHHHH-HcCCCEEEEEeCCCHHHHHHHHHHHHHHhCC-CCEEEE-------eCCCCCCHHHHHHHHHH-
Confidence 4568899999999988 689997 99998654 23333322 112333 47899999998887777
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhcc-CcceeEeeccccccHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK-TCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~-a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
+++|++.+||||+..+||+++++|++++ ++||++|| +++++.++++.++.+ +++.+++|++++|++|++++++.+|
T Consensus 207 l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a 283 (356)
T 3ro6_B 207 VQELGIEFIEQPFPAGRTDWLRALPKAI--RRRIAADE-SLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIA 283 (356)
T ss_dssp HHHTTCCCEECCSCTTCHHHHHTSCHHH--HHTEEEST-TCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCCCcHHHHHHHHhcC--CCCEEeCC-cCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHH
Confidence 5999999999999999999999999998 89999999 789999999999999 9999999999999999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 177 KRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
+++|+.+|++++ .|+.....+.+.++...+
T Consensus 284 ~~~gi~~~~~~~-~es~i~~aa~~hlaaa~p 313 (356)
T 3ro6_B 284 ETAGIDLMWGCM-DESRISIAAALHAALACP 313 (356)
T ss_dssp HHHTCEEEECCC-SCCHHHHHHHHHHHHTCT
T ss_pred HHcCCEEEecCC-cccHHHHHHHHHHHhcCC
Confidence 999999999875 688776666555554333
No 50
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.81 E-value=1.2e-19 Score=167.09 Aligned_cols=160 Identities=21% Similarity=0.238 Sum_probs=132.7
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-eh----hh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-DV----AA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~----Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
.++++..+.+.+++ ++||+. ||++|- |+ +. ++.+.+ .+.+. .|+|+.+|.+|.+++++. +
T Consensus 143 ~~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~---~~~l~-----vDan~~~~~~~a~~~~~~-l 212 (359)
T 1mdl_A 143 DGVKLATERAVTAA-ELGFRAVKTRIGYPALDQDLAVVRSIRQAVGD---DFGIM-----VDYNQSLDVPAAIKRSQA-L 212 (359)
T ss_dssp CHHHHHHHHHHHHH-HTTCSEEEEECCCSSHHHHHHHHHHHHHHHCS---SSEEE-----EECTTCSCHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEecCCCCHHHHHHHHHHHHHHhCC---CCEEE-----EECCCCCCHHHHHHHHHH-H
Confidence 46788778888877 689996 898876 33 22 222211 23332 247889999999998887 6
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|++.+||||+.++||++|++|++++ ++||++|| .+++++++++.++.++++.++||++++||+|++++++++|++
T Consensus 213 ~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPI~~de-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~ 289 (359)
T 1mdl_A 213 QQEGVTWIEEPTLQHDYEGHQRIQSKL--NVPVQMGE-NWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQ 289 (359)
T ss_dssp HHHTCSCEECCSCTTCHHHHHHHHHTC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHH
T ss_pred HHhCCCeEECCCChhhHHHHHHHHHhC--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHH
Confidence 999999999999999999999999998 79999999 678899999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+|+.+|+++. ++ ..+|||.++..
T Consensus 290 ~g~~~~~~~~-~~----a~~~laaa~~~ 312 (359)
T 1mdl_A 290 FGIPMSSHLF-QE----ISAHLLAATPT 312 (359)
T ss_dssp TTCCBCCBSC-HH----HHHHHHHTCTT
T ss_pred cCCeEeeccH-HH----HHHHHHHhCCC
Confidence 9999999963 22 77888877653
No 51
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.81 E-value=1.1e-19 Score=169.27 Aligned_cols=167 Identities=17% Similarity=0.174 Sum_probs=134.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++.++.+.+.+++.||+. |+++|.+ + |.++.+.+ .-...+ |+|+.+|.++.+.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~-~~~l~v-------DaN~~~~~~~A~~~~~~- 215 (381)
T 3fcp_A 145 SGDTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGD-RASIRV-------DVNQAWDAATGAKGCRE- 215 (381)
T ss_dssp SSCHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCT-TCEEEE-------ECTTCBCHHHHHHHHHH-
T ss_pred CCChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCC-CCeEEE-------ECCCCCCHHHHHHHHHH-
Confidence 3467888888888886579997 9998753 2 22333322 112333 48999999998887776
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+..+||+++++|++++ ++||++|| ++.++.++++.++.++++.+++|++++|++|++++++.+|+
T Consensus 216 l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~ 292 (381)
T 3fcp_A 216 LAAMGVDLIEQPVSAHDNAALVRLSQQI--ETAILADE-AVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQ 292 (381)
T ss_dssp HHHTTCSEEECCBCTTCHHHHHHHHHHS--SSEEEEST-TCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHH
T ss_pred HhhcCccceeCCCCcccHHHHHHHHHhC--CCCEEECC-CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHH
Confidence 6999999999999999999999999999 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
++|+.+|++++ .|+.....+.+.++...+
T Consensus 293 ~~gi~~~~~~~-~es~i~~aa~~hlaaa~~ 321 (381)
T 3fcp_A 293 AAGIGLYGGTM-LEGTVGTVASLHAWSTLP 321 (381)
T ss_dssp HHTCEEEECCS-CCCHHHHHHHHHHHTTSC
T ss_pred HcCCceecCCC-CccHHHHHHHHHHHHhCC
Confidence 99999999885 688777777666655444
No 52
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=99.81 E-value=4e-19 Score=166.59 Aligned_cols=172 Identities=17% Similarity=0.166 Sum_probs=142.4
Q ss_pred cHHHHHHHHHHHHhcCCcc-ceeee--eehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCc
Q 040341 31 SYEGFELLKTAIAKGGYIG-KIVIG--MDVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPI 103 (251)
Q Consensus 31 ~eeal~~i~~Ai~~aGy~~-kI~ig--lD~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI 103 (251)
+++..+.+.+++ +.||+. |++++ .|++ .++.+.+ .-...+ |+|+.+|.++ +++.+. +++|+|
T Consensus 164 ~e~~~~~a~~~~-~~G~~~iKlKv~~~~d~~~v~avR~a~G~-~~~L~v-------DaN~~w~~~~-~~~~~~-l~~~~i 232 (400)
T 3mwc_A 164 IETLIHQVEESL-QEGYRRIKIKIKPGWDVEPLQETRRAVGD-HFPLWT-------DANSSFELDQ-WETFKA-MDAAKC 232 (400)
T ss_dssp HHHHHHHHHHHH-HHTCSCEEEECBTTBSHHHHHHHHHHHCT-TSCEEE-------ECTTCCCGGG-HHHHHH-HGGGCC
T ss_pred HHHHHHHHHHHH-HcCCCEEEEEeCcchHHHHHHHHHHhcCC-CCEEEE-------eCCCCCCHHH-HHHHHH-HHhcCC
Confidence 789999999988 679996 77764 4443 3333321 112333 4899999999 888776 699999
Q ss_pred eeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE
Q 040341 104 VSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV 183 (251)
Q Consensus 104 ~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ 183 (251)
.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++++|+++|+.+
T Consensus 233 ~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~ 309 (400)
T 3mwc_A 233 LFHEQPLHYEALLDLKELGERI--ETPICLDE-SLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKL 309 (400)
T ss_dssp SCEESCSCTTCHHHHHHHHHHS--SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred CEEeCCCChhhHHHHHHHHhhC--CCCEEEeC-CcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999998 79999999 68899999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCchhHhhhhhhcccCccccCCCCch
Q 040341 184 MASHRSGETEDTFIADLSVGLATGQIKTGAPCRS 217 (251)
Q Consensus 184 ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~ 217 (251)
|++++ .||.....+.+.++....+...+++..+
T Consensus 310 ~~~~~-~es~i~~aa~~hlaa~~~~~~~~d~~~~ 342 (400)
T 3mwc_A 310 WGGTM-PESGLGARFLISLASFRGFVFPADVAAS 342 (400)
T ss_dssp EECCS-CCCHHHHHHHHHHTTBTTBCSCBCCCCH
T ss_pred EecCC-CCCHHHHHHHHHHHcCCCCcceeccCch
Confidence 99986 7888888888887775556555555443
No 53
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.81 E-value=1.9e-19 Score=167.68 Aligned_cols=163 Identities=12% Similarity=0.066 Sum_probs=135.3
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-eh-------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-DV-------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~-------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
.++++..+.+.+++ ++||+. ||++|- |. +.++.+.+ .+.+. .|+|+.+|.+|.+++++. ++
T Consensus 163 ~~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~~e~v~avr~a~g~---d~~l~-----vDan~~~~~~~a~~~~~~-l~ 232 (388)
T 2nql_A 163 RTLKARGELAKYWQ-DRGFNAFKFATPVADDGPAAEIANLRQVLGP---QAKIA-----ADMHWNQTPERALELIAE-MQ 232 (388)
T ss_dssp SSHHHHHHHHHHHH-HTTCCEEEEEGGGCTTCHHHHHHHHHHHHCT---TSEEE-----EECCSCSCHHHHHHHHHH-HG
T ss_pred CCHHHHHHHHHHHH-HhCCCEEEEeCCCCChHHHHHHHHHHHHhCC---CCEEE-----EECCCCCCHHHHHHHHHH-Hh
Confidence 47788888888877 789996 888874 32 11222211 23332 147889999999998887 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|+|.+||||+.++||++|++|++++ ++||++|| .++++++++++++.++++.++||+++ ||+|++++++++|+++
T Consensus 233 ~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~ 308 (388)
T 2nql_A 233 PFDPWFAEAPVWTEDIAGLEKVSKNT--DVPIAVGE-EWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGALAAEH 308 (388)
T ss_dssp GGCCSCEECCSCTTCHHHHHHHHTSC--CSCEEECT-TCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHH
T ss_pred hcCCCEEECCCChhhHHHHHHHHhhC--CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHc
Confidence 99999999999999999999999998 79999999 68899999999999999999999999 9999999999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|+.+|+ |++.||.....+.+.++...
T Consensus 309 g~~~~~-h~~~es~i~~aa~~hlaa~~ 334 (388)
T 2nql_A 309 GIDVIP-HATVGAGIFLAASLQASSTL 334 (388)
T ss_dssp TCEECC-CCCSSCSHHHHHHHHHHTTC
T ss_pred CCeEEe-ecCCCcHHHHHHHHHHHHhC
Confidence 999999 55689988877766666544
No 54
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=99.80 E-value=1.8e-19 Score=168.56 Aligned_cols=163 Identities=16% Similarity=0.203 Sum_probs=135.0
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeee-------------h----hhhcccccCCcceeecCCCCCCCCCCccChh
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMD-------------V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGD 88 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-------------~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~ 88 (251)
.+.++++..+.+.+++ +.||+. |+++|.+ + |.++.+++ -...+ |+|+.+|.+
T Consensus 162 ~~~~~e~~~~~a~~~~-~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~d--~~L~v-------DaN~~w~~~ 231 (393)
T 3u9i_A 162 TTGSVTAAARAAQAIV-ARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPT--ARLIL-------DGNCGYTAP 231 (393)
T ss_dssp C---CHHHHHHHHHHH-TTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHSTT--SEEEE-------ECCSCCCHH
T ss_pred cCCCHHHHHHHHHHHH-HcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCCC--CeEEE-------EccCCCCHH
Confidence 4568899999999988 689997 9998865 2 33444432 23444 489999999
Q ss_pred hHHHHHHHhh--hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccH
Q 040341 89 GLKNVYRSFI--SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV 166 (251)
Q Consensus 89 elid~~~~l~--~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtl 166 (251)
+.+.+.+. + +.|+|.+||||+..+|+++++.|++++ .+||++|| +++++.++++.++.++++.+++||++ ||+
T Consensus 232 ~A~~~~~~-L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~i~~k~~~-GGi 306 (393)
T 3u9i_A 232 DALRLLDM-LGVHGIVPALFEQPVAKDDEEGLRRLTATR--RVPVAADE-SVASATDAARLARNAAVDVLNIKLMK-CGI 306 (393)
T ss_dssp HHHHHHHT-TTTTTCCCSEEECCSCTTCTTHHHHHHHTC--SSCEEEST-TCCSHHHHHHHHHTTCCSEEEECHHH-HCH
T ss_pred HHHHHHHH-HhhCCCCeEEEECCCCCCcHHHHHHHHhhC--CCcEEeCC-cCCCHHHHHHHHHcCCCCEEEecccc-cCH
Confidence 98887776 6 789999999999999999999999998 79999999 79999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 167 TESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 167 te~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
|++++++.+|+++|+.+|++++ .|+.....+.+.++..
T Consensus 307 t~~~~ia~~A~~~gi~~~~~~~-~es~ig~aa~~hlaaa 344 (393)
T 3u9i_A 307 VEALDIAAIARTAGLHLMIGGM-VESLLAMTVSACFAAG 344 (393)
T ss_dssp HHHHHHHHHHHHHTCEEEECCS-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEecCC-cccHHHHHHHHHHHhc
Confidence 9999999999999999999886 5777666666555543
No 55
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=99.80 E-value=3.2e-19 Score=166.35 Aligned_cols=167 Identities=18% Similarity=0.207 Sum_probs=138.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++.++.+.+++ +.||+. |+++|.+ + |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 146 ~~~~~~~~~~a~~~~-~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~~~--~~l~v-------Dan~~~~~~~A~~~~~~- 214 (385)
T 3i6e_A 146 NPDFDADIALMERLR-ADGVGLIKLKTGFRDHAFDIMRLELIARDFPE--FRVRV-------DYNQGLEIDEAVPRVLD- 214 (385)
T ss_dssp CSSHHHHHHHHHHHH-HHTCCEEEEECSSSCHHHHHHHHHHHHHHCTT--SEEEE-------ECTTCCCGGGHHHHHHH-
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEecCCCCHHHHHHHHHHHHHhCCC--CeEEE-------ECCCCCCHHHHHHHHHH-
Confidence 457788888888888 579997 9998852 2 33444422 23344 48899999998888777
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++||+|++++++++|+
T Consensus 215 L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~ 291 (385)
T 3i6e_A 215 VAQFQPDFIEQPVRAHHFELMARLRGLT--DVPLLADE-SVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAA 291 (385)
T ss_dssp HHTTCCSCEECCSCTTCHHHHHHHHTTC--SSCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHHhC--CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHH
Confidence 5999999999999999999999999998 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
++|+.+|++++ .|+.....+.+.++...+.+
T Consensus 292 ~~gi~~~~~~~-~es~i~~aa~~hlaaa~~~~ 322 (385)
T 3i6e_A 292 AHGLMAYGGDM-FEAGLAHLAGTHMIAATPEI 322 (385)
T ss_dssp HTTCEEEECCC-SCCHHHHHHHHHHHHTCTTE
T ss_pred HcCCEEEeCCC-CccHHHHHHHHHHHHhCCCC
Confidence 99999999775 78877777766655544443
No 56
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=99.80 E-value=1.3e-19 Score=170.71 Aligned_cols=163 Identities=14% Similarity=0.207 Sum_probs=134.0
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeeee----------------------------h----hhhcccccCCcceeecCC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGMD----------------------------V----AASEFYDSKDKTYDLNFK 75 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~iglD----------------------------~----Aase~~~~~~g~Y~l~~~ 75 (251)
.++++..+.+.+++ +.||+. |+++|.. + |.++.+.+ +-...+
T Consensus 152 ~~~~~~~~~a~~~~-~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~-~~~l~v--- 226 (421)
T 4hnl_A 152 DNLDDLYHEIDRFL-AAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN-QFQMLH--- 226 (421)
T ss_dssp SSHHHHHHHHHHHH-HTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT-SSEEEE---
T ss_pred CCHHHHHHHHHHHH-HhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC-CceEec---
Confidence 46789999999988 689996 8888741 1 22222211 112233
Q ss_pred CCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcce
Q 040341 76 EENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA 155 (251)
Q Consensus 76 ~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ 155 (251)
|+|+.+|.++.+.+.+. +++|+|.+||||+.++|+++|++|++++ +++|++|| +++++.++++.++.++++.
T Consensus 227 ----Dan~~~~~~~A~~~~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~a~d~ 298 (421)
T 4hnl_A 227 ----DVHERLHPNQAIQFAKA-AEPYQLFFLEDILPPDQSHWLTQLRSQS--ATPIATGE-LFNNPMEWQELVKNRQIDF 298 (421)
T ss_dssp ----ECTTCSCHHHHHHHHHH-HGGGCCSEEECCSCGGGGGGHHHHHTTC--CCCEEECT-TCCSGGGTHHHHHTTCCSE
T ss_pred ----cccccCCHHHHHHHHHH-hhhhhhcccccCCcccchHHHHHHHhcC--CCCeecCc-ceehhHHHHHHHhcCCceE
Confidence 58999999999997776 6999999999999999999999999999 79999999 7899999999999999999
Q ss_pred eEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 156 LLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 156 ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+++|++++||+||+++++++|+++|+.+++.+....+.....|.+.++.
T Consensus 299 v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~~s~i~~aa~~hl~a 347 (421)
T 4hnl_A 299 MRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSDISPVGLAVNTHLNI 347 (421)
T ss_dssp ECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHHHHHHHHHH
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999998875445556655554444
No 57
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.80 E-value=1.3e-19 Score=168.15 Aligned_cols=163 Identities=19% Similarity=0.193 Sum_probs=133.1
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-eh----hhhcccccCCc-ceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-DV----AASEFYDSKDK-TYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~----Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
.++++..+.+.+++ ++||+. ||++|- |+ +.-+..++.-| .+.+. .|+|+.+|.+|.+++++.| + |
T Consensus 144 ~~~e~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~-----vDan~~~~~~~a~~~~~~l-~-~ 215 (378)
T 2qdd_A 144 GTPDQMLGLIAEAA-AQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVT-----FDVNRAWTPAIAVEVLNSV-R-A 215 (378)
T ss_dssp CCHHHHHHHHHHHH-HHTCCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEE-----EECTTCCCHHHHHHHHTSC-C-C
T ss_pred CCHHHHHHHHHHHH-HHhhhheeecCCCCChHHHHHHHHHHHHHhCCCCEEE-----EeCCCCCCHHHHHHHHHHh-C-C
Confidence 57788888888887 689996 898885 43 22222222111 23332 2478899999999988885 8 9
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW 181 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~ 181 (251)
+| +||||+. ||++|++|++++ ++||++|| ++++++++++.++.++++.++||++++||+|++++++++|+++|+
T Consensus 216 ~i-~iEqP~~--d~~~~~~l~~~~--~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~ 289 (378)
T 2qdd_A 216 RD-WIEQPCQ--TLDQCAHVARRV--ANPIMLDE-CLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGW 289 (378)
T ss_dssp CC-EEECCSS--SHHHHHHHHTTC--CSCEEECT-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTC
T ss_pred Cc-EEEcCCC--CHHHHHHHHHhC--CCCEEECC-CcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 99 9999998 999999999998 79999999 588899999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCchhHhhhhhhccc
Q 040341 182 GVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 182 ~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+|++++ .||.....+.+.++...
T Consensus 290 ~~~~~~~-~es~i~~aa~~hlaaa~ 313 (378)
T 2qdd_A 290 QMHIEDV-GGTALADTAALHLAAST 313 (378)
T ss_dssp EEEECCS-SCCHHHHHHHHHHHHTS
T ss_pred eEEecCC-CCcHHHHHHHHHHHHcC
Confidence 9999964 78888776666665443
No 58
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=99.80 E-value=3e-19 Score=167.44 Aligned_cols=161 Identities=17% Similarity=0.152 Sum_probs=137.5
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhc
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD 100 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ 100 (251)
++++..+.+.+++++.||+. |+++|.|+ |.++.+++ -...+ |+|+.+|.++.+.+.+. +++
T Consensus 168 ~~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~~~--~~l~v-------DaN~~w~~~~A~~~~~~-l~~ 237 (398)
T 4dye_A 168 LPKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREALPG--VNLRV-------DPNAAWSVPDSVRAGIA-LEE 237 (398)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHHCTT--SEEEE-------ECTTCSCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCC--CeEEe-------eCCCCCCHHHHHHHHHH-Hhh
Confidence 35888999999884449997 99998554 33444422 23344 48999999998887776 599
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
|+|.+||||+. |++++++|++++ .+||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|+++|
T Consensus 238 ~~i~~iEqP~~--d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~g 312 (398)
T 4dye_A 238 LDLEYLEDPCV--GIEGMAQVKAKV--RIPLCTNM-CVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFG 312 (398)
T ss_dssp GCCSEEECCSS--HHHHHHHHHHHC--CSCEEESS-SCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHT
T ss_pred cCCCEEcCCCC--CHHHHHHHHhhC--CCCEEeCC-cCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcC
Confidence 99999999999 999999999999 79999999 78999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCchhHhhhhhhccc
Q 040341 181 WGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 181 ~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+.+|+++ .+|+.....|+++++...
T Consensus 313 i~~~~h~-~~e~~i~~aa~l~laaa~ 337 (398)
T 4dye_A 313 LGMNLHS-GGELGIATAAHLAVVSST 337 (398)
T ss_dssp CEEEECC-SCCCHHHHHHHHHHHHTC
T ss_pred CeEEEcC-CcchHHHHHHHHHHHhcC
Confidence 9999987 689988888888877643
No 59
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=99.80 E-value=5e-19 Score=163.99 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=138.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-----eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-----DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++.++...+.+++.||+. |+++|. |+ |.++.+.+ ...+. .|+|+.+|.++.+.+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~---~~~l~-----vDan~~~~~~~a~~~~~~- 210 (370)
T 1chr_A 140 SGDTKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGS---KAYLR-----VDVNQAWDEQVASVYIPE- 210 (370)
T ss_dssp SSSHHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSST---TCCEE-----EECTTCCCTTHHHHHTHH-
T ss_pred CCCcHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCC---CCEEE-----EECCCCCCHHHHHHHHHH-
Confidence 3456777887888887799997 999875 23 23333332 13332 247899999998887776
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|+
T Consensus 211 l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPia~dE-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~ 287 (370)
T 1chr_A 211 LEALGVELIEQPVGRENTQALRRLSDNN--RVAIMADE-SLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAE 287 (370)
T ss_dssp HHTTTEEEEECCSCTTCHHHHHHHHHHS--CSEEEESS-SCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHH
Confidence 6999999999999999999999999998 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhhhcccCc
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
++|+.+|++++ .|+.....+.+.++...+.
T Consensus 288 ~~g~~~~~~~~-~es~i~~aa~~hlaaa~~~ 317 (370)
T 1chr_A 288 ASGIASYGGTM-LDSTIGTSVALQLYSTVPS 317 (370)
T ss_dssp HHTCEEEECCS-CCTTHHHHHHHHHHTTSSC
T ss_pred HcCCeEEecCC-CccHHHHHHHHHHHHhCCC
Confidence 99999999885 6787777776666554443
No 60
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.80 E-value=5.2e-19 Score=163.68 Aligned_cols=157 Identities=16% Similarity=0.190 Sum_probs=129.0
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeee-eh----hh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGM-DV----AA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~igl-D~----Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
++++..+.+.+++ ++||+. ||++|- ++ +. ++.+.+ .+.+. .|+|+.+|.+|.+++++. ++
T Consensus 146 ~~e~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~---d~~l~-----vDan~~~~~~~a~~~~~~-l~ 215 (371)
T 2ovl_A 146 PVADLKTQADRFL-AGGFRAIKMKVGRPDLKEDVDRVSALREHLGD---SFPLM-----VDANMKWTVDGAIRAARA-LA 215 (371)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECCCSSHHHHHHHHHHHHHHHCT---TSCEE-----EECTTCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECCCCCCHHHHHHHHHHHHHHhCC---CCeEE-----EECCCCCCHHHHHHHHHH-HH
Confidence 6788888888877 789997 888875 32 22 222211 22222 247889999999998887 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|++.+||||+..+||++|++|++++ ++||++|| .++++.++++.++.++++.++||++++||+|++++++++|+++
T Consensus 216 ~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~ 292 (371)
T 2ovl_A 216 PFDLHWIEEPTIPDDLVGNARIVRES--GHTIAGGE-NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEAN 292 (371)
T ss_dssp GGCCSEEECCSCTTCHHHHHHHHHHH--CSCEEECT-TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHT
T ss_pred hcCCCEEECCCCcccHHHHHHHHhhC--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999 79999999 6889999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhc
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
|+.+|+++. .| .-++||.++
T Consensus 293 gi~~~~h~~-~~----a~~hlaaa~ 312 (371)
T 2ovl_A 293 NMLLTSHGV-HD----LTVHALASV 312 (371)
T ss_dssp TCCEEECSC-HH----HHHHHHTSC
T ss_pred CCeEccccH-HH----HHHHHHhhC
Confidence 999999764 22 445555544
No 61
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=99.80 E-value=6.8e-20 Score=166.97 Aligned_cols=161 Identities=15% Similarity=0.161 Sum_probs=130.8
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeee--h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMD--V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD--~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
+..++++..+.+.+++ +.||+. |+++|-+ + |.++.+++ -...+ |+|+.+|.++.+++++. ++
T Consensus 129 ~~~~~e~~~~~a~~~~-~~G~~~~KiKvg~~~d~~~v~avr~~~~~--~~l~v-------DaN~~~~~~~a~~~~~~-l~ 197 (324)
T 1jpd_X 129 VIGTPDQMANSASTLW-QAGAKLLKVKLDNHLISERMVAIRTAVPD--ATLIV-------DANESWRAEGLAARCQL-LA 197 (324)
T ss_dssp CSCCHHHHHHHHHHHH-HTTCSEEEEECCSSCHHHHHHHHHHHCTT--SEEEE-------ECTTCCCSTTHHHHHHH-HH
T ss_pred eCCCHHHHHHHHHHHH-HcCCCEEEEEeCCchHHHHHHHHHHhCCC--CEEEE-------ECcCCCCHHHHHHHHHH-HH
Confidence 3457888888888887 689996 8888843 3 22333322 23444 48899999999997776 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|+|.+||||+.++|+++|++++ . ++||++|| +++|+.++++.++. ++.+++||+++||+|++++++++|+++
T Consensus 198 ~~~i~~iEqP~~~~d~~~~~~l~--~--~ipIa~dE-~~~~~~~~~~~~~~--~~~i~ik~~~~GGit~~~~i~~~A~~~ 270 (324)
T 1jpd_X 198 DLGVAMLEQPLPAQDDAALENFI--H--PLPICADE-SCHTRSNLKALKGR--YEMVNIKLDKTGGLTEALALATEARAQ 270 (324)
T ss_dssp HTTCCEEECCSCTTSCGGGGSSC--C--SSCEEEST-TCSSGGGHHHHBTT--BSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred hCCCCEEECCCCCCCHHHHHhcc--C--CCCEEEcC-CCCCHHHHHHHHhh--CCEEEEcchhhCcHHHHHHHHHHHHHc
Confidence 99999999999999999998774 3 79999999 67999999998754 899999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|+.+|++++ .||.....+-+.++...
T Consensus 271 g~~~~~~~~-~es~i~~aa~~~la~~~ 296 (324)
T 1jpd_X 271 GFSLMLGCM-LCTSRAISAALPLVPQV 296 (324)
T ss_dssp TCEEEECCC-SCCHHHHHHHGGGGGGC
T ss_pred CCcEEEeCc-chHHHHHHHHHHHhhcC
Confidence 999999996 57777776666665443
No 62
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.80 E-value=2e-19 Score=168.46 Aligned_cols=165 Identities=13% Similarity=0.077 Sum_probs=131.6
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceee------ee----------------------ehhhhcccccCCc-ceeecCCCCCC
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVI------GM----------------------DVAASEFYDSKDK-TYDLNFKEENN 79 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~i------gl----------------------D~Aase~~~~~~g-~Y~l~~~~~~~ 79 (251)
++++..+.+.+++ ++||+. ||++ |. |++.-+..++.-| .+.+. .
T Consensus 150 ~~~~~~~~a~~~~-~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~-----v 223 (410)
T 2gl5_A 150 TPEEYAEAARAAL-DDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADII-----V 223 (410)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEE-----E
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEE-----E
Confidence 6788888888887 689996 8776 43 1211111111001 23332 2
Q ss_pred CCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee
Q 040341 80 DGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 159 (251)
Q Consensus 80 d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK 159 (251)
|+|+.+|.+|.+++++. +++|+|.+||||+.++||++|++|++++ ++||++|| .++++.++++.++.++++.+++|
T Consensus 224 Dan~~~~~~~ai~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 224 EIHSLLGTNSAIQFAKA-IEKYRIFLYEEPIHPLNSDNMQKVSRST--TIPIATGE-RSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp ECTTCSCHHHHHHHHHH-HGGGCEEEEECSSCSSCHHHHHHHHHHC--SSCEEECT-TCCTTHHHHHHHHTTCCSEECCC
T ss_pred ECCCCCCHHHHHHHHHH-HHhcCCCeEECCCChhhHHHHHHHHhhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEEecC
Confidence 47889999999998887 6999999999999999999999999998 79999999 57899999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 160 VNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 160 ~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
++|+||+||+++++++|+++|+.+|+++. +|.....+.+.++...
T Consensus 300 ~~~~GGit~~~~ia~~A~~~gi~~~~h~~--~s~i~~aa~~hlaaa~ 344 (410)
T 2gl5_A 300 LCLCGGITEGKKICDYANIYDTTVQVHVC--GGPVSTVAALHMETAI 344 (410)
T ss_dssp TTTTTHHHHHHHHHHHHHTTTCEECCCCC--SSHHHHHHHHHHHHHC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEeecCC--CCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999654 4777766655554433
No 63
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.79 E-value=5.8e-19 Score=164.72 Aligned_cols=159 Identities=19% Similarity=0.285 Sum_probs=132.4
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeee-e----hh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGM-D----VA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
++++..+.+.+++ ++||+. ||++|- + ++ .++.+.+ .+.+. .|+|+.+|.+|.+++++. ++
T Consensus 162 ~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~---d~~l~-----vDan~~~~~~~a~~~~~~-l~ 231 (393)
T 2og9_A 162 PIDQLMVNASASI-ERGIGGIKLKVGQPDGALDIARVTAVRKHLGD---AVPLM-----VDANQQWDRPTAQRMCRI-FE 231 (393)
T ss_dssp CHHHHHHHHHHHH-HTTCCCEEEECCCSCHHHHHHHHHHHHHHHCT---TSCEE-----EECTTCCCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEecCCCCHHHHHHHHHHHHHHcCC---CCEEE-----EECCCCCCHHHHHHHHHH-HH
Confidence 6788888888887 789997 888873 2 22 2222211 23332 147889999999998887 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|+|.+||||+..+||++|++|++++ ++||++|| +++++.++++.++.++++.++|||+++||+|++++++++|+++
T Consensus 232 ~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 308 (393)
T 2og9_A 232 PFNLVWIEEPLDAYDHEGHAALALQF--DTPIATGE-MLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHA 308 (393)
T ss_dssp GGCCSCEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHT
T ss_pred hhCCCEEECCCCcccHHHHHHHHHhC--CCCEEeCC-CcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999 79999999 6889999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|+.+|++ .+++ +.+|||+++..
T Consensus 309 gi~~~~h-~~~~----~~~~laaa~~~ 330 (393)
T 2og9_A 309 GLMLAPH-FAME----LHVHLAAAYPR 330 (393)
T ss_dssp TCEECCC-SCHH----HHHHHHHTSSS
T ss_pred CCEEecc-CccH----HHHHHHhhCCC
Confidence 9998864 4454 47899988754
No 64
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=99.79 E-value=1.4e-18 Score=161.92 Aligned_cols=162 Identities=22% Similarity=0.332 Sum_probs=135.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
+.++++..+.+.+++ +.||+. |+++|.|. |.++.+.+ .-...+ |+|+.+|.++.+.+.+. +
T Consensus 140 ~~~~e~~~~~a~~~~-~~Gf~~~KlK~g~~~~~d~~~v~avR~a~g~-~~~L~v-------DaN~~w~~~~A~~~~~~-l 209 (379)
T 3r0u_A 140 CGNVAETIQNIQNGV-EANFTAIKVKTGADFNRDIQLLKALDNEFSK-NIKFRF-------DANQGWNLAQTKQFIEE-I 209 (379)
T ss_dssp CCCHHHHHHHHHHHH-HTTCCEEEEECSSCHHHHHHHHHHHHHHCCT-TSEEEE-------ECTTCCCHHHHHHHHHH-H
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEeeecCCCHHHHHHHHHHHHHhcCC-CCeEEE-------eCCCCcCHHHHHHHHHH-H
Confidence 467899999999988 679997 99998754 23333332 112334 48999999998887776 5
Q ss_pred hc--CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 99 SD--HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 99 ~~--ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
++ |+|.+||||+..+|++++++|++++ .+||++|| +++++.++++.++.++++.+++||.++|++|++++++.+|
T Consensus 210 ~~~~~~l~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A 286 (379)
T 3r0u_A 210 NKYSLNVEIIEQPVKYYDIKAMAEITKFS--NIPVVADE-SVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLA 286 (379)
T ss_dssp HTSCCCEEEEECCSCTTCHHHHHHHHHHC--SSCEEEST-TCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHH
T ss_pred hhcCCCcEEEECCCCcccHHHHHHHHhcC--CCCEEeCC-ccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHH
Confidence 88 8899999999999999999999998 79999999 7999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhHhhhhhh
Q 040341 177 KRAGWGVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~iadLAva 203 (251)
+++|+.+|++++ .|+.....+-+.++
T Consensus 287 ~~~gi~~~~~~~-~es~i~~aa~~hla 312 (379)
T 3r0u_A 287 DSAGISCMVGCM-MESPAGILATASFA 312 (379)
T ss_dssp HHTTCEEEECCC-SCCHHHHHHHHHHH
T ss_pred HHcCCEEEEeCC-CccHHHHHHHHHHH
Confidence 999999999875 67766555544443
No 65
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=99.79 E-value=6.4e-19 Score=163.70 Aligned_cols=167 Identities=14% Similarity=0.195 Sum_probs=137.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++.++.+.+++ +.||+. |+++|-+ + |.++.+.+ .-...+ |+|+.+|.++.+.+.+.
T Consensus 144 ~~~~~~~~~~a~~~~-~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~-~~~l~v-------Dan~~~~~~~A~~~~~~- 213 (377)
T 3my9_A 144 DPDFDADLERMRAMV-PAGHTVFKMKTGVKPHAEELRILETMRGEFGE-RIDLRL-------DFNQALTPFGAMKILRD- 213 (377)
T ss_dssp CSSHHHHHHHHHHHT-TTTCCEEEEECSSSCHHHHHHHHHHHHHHHGG-GSEEEE-------ECTTCCCTTTHHHHHHH-
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEccCCCcHHHHHHHHHHHHHHhCC-CCeEEE-------eCCCCcCHHHHHHHHHH-
Confidence 457788888888877 569997 9998853 2 22333322 012333 48899999998887776
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+..+|++++++|++++ .+||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|+
T Consensus 214 l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~ 290 (377)
T 3my9_A 214 VDAFRPTFIEQPVPRRHLDAMAGFAAAL--DTPILADE-SCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIAD 290 (377)
T ss_dssp HHTTCCSCEECCSCTTCHHHHHHHHHHC--SSCEEEST-TCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHH
T ss_pred HhhcCCCEEECCCCccCHHHHHHHHHhC--CCCEEECC-ccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHH
Confidence 6999999999999999999999999998 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhhhcccCc
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
++|+.+|++|+ .|+.....+.+.++.....
T Consensus 291 ~~gi~~~~~~~-~es~i~~aa~~hlaaa~~~ 320 (377)
T 3my9_A 291 TAGLPGYGGTL-WEGGIALAAGTQLIAATPG 320 (377)
T ss_dssp HHTCCEECCEE-CCSHHHHHHHHHHHHTCTT
T ss_pred HcCCeEecCCC-CCcHHHHHHHHHHHHhCCC
Confidence 99999999775 6777776666555544433
No 66
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=99.78 E-value=8.7e-19 Score=160.78 Aligned_cols=170 Identities=17% Similarity=0.144 Sum_probs=137.1
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcCCcc-ceeeee--ehhhhcccccCCc-ceeecCCCCCCCCCCccC-hhhHHHHHHHhh
Q 040341 24 FAPNIQESYEGFELLKTAIAKGGYIG-KIVIGM--DVAASEFYDSKDK-TYDLNFKEENNDGSQKVS-GDGLKNVYRSFI 98 (251)
Q Consensus 24 fap~~~~~eeal~~i~~Ai~~aGy~~-kI~igl--D~Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s-~~elid~~~~l~ 98 (251)
|+..+.++++..+.+.++.+ ||+. |+++|- |++.-+..++.-+ ...+ |+|+.+| .++.+.+.+. +
T Consensus 128 ~~~~~~~~e~~~~~a~~~~~--g~~~~K~Kvg~~~d~~~v~avR~~~~~~l~v-------DaN~~~t~~~~A~~~~~~-l 197 (338)
T 3ijl_A 128 FTIGIDTPDVVRAKTKECAG--LFNILKVKLGRDNDKEMIETIRSVTDLPIAV-------DANQGWKDRQYALDMIHW-L 197 (338)
T ss_dssp CBCCCCCHHHHHHHHHHHHT--TCSSEEEECSSSCHHHHHHHHHTTCCCCEEE-------ECTTCCCCHHHHHHHHHH-H
T ss_pred EEEeCCCHHHHHHHHHHHHh--cccEEEEecCcHHHHHHHHHHHhhcCCcEEE-------ECcCCCCCHHHHHHHHHH-H
Confidence 44456788999998888763 8996 888875 4432222222111 2333 5899995 9998898887 5
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|+|.+||||+..+|++++++|++++ .+||++|| ++.++.++++.+ ++++.+++||+++|++|++++++++|++
T Consensus 198 ~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~~--~a~d~i~~k~~~~GGit~~~~ia~~A~~ 272 (338)
T 3ijl_A 198 KEKGIVMIEQPMPKEQLDDIAWVTQQS--PLPVFADE-SLQRLGDVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHA 272 (338)
T ss_dssp HHTTEEEEECCSCTTCHHHHHHHHHTC--SSCEEEST-TCCSGGGTGGGB--TTBSEEEECHHHHTSHHHHHHHHHHHHH
T ss_pred hhCCCCEEECCCCCCcHHHHHHHHhcC--CCCEEECC-CCCCHHHHHHHH--hhCCEEEecccccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999998 79999999 677888877765 7999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
+|+.+|++++ .|+.....+-+.++....+.
T Consensus 273 ~gi~~~~~~~-~es~i~~aa~~~la~~~~~~ 302 (338)
T 3ijl_A 273 LGMRVMVGCM-TETSCAISAASQFSPAVDFA 302 (338)
T ss_dssp TTCEEEECCC-SCCHHHHHHHHTTGGGCSEE
T ss_pred cCCEEEecCC-cccHHHHHHHHHHhccCCcc
Confidence 9999999876 68888777777777666654
No 67
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=99.78 E-value=2.8e-18 Score=160.13 Aligned_cols=163 Identities=17% Similarity=0.219 Sum_probs=134.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeee-----ee----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHH
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIG-----MD----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNV 93 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~ig-----lD----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~ 93 (251)
..++++..+.+.+++ +.||+. |+++| .| + |.++.+.+ ...|. .|+|+.+|.++.+.+
T Consensus 143 ~~~~e~~~~~a~~~~-~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~---~~~L~-----vDaN~~~~~~~A~~~ 213 (386)
T 3fv9_G 143 GDTPEAMRAKVARHR-AQGFKGHSIKIGASEAEGGPALDAERITACLADRQP---GEWYL-----ADANNGLTVEHALRM 213 (386)
T ss_dssp SCCHHHHHHHHHHHH-HTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCT---TCEEE-----EECTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-HCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCC---CCeEE-----EECCCCCCHHHHHHH
Confidence 567899999999877 789997 99988 22 2 22333321 12332 248999999998887
Q ss_pred HHHhh-hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHH
Q 040341 94 YRSFI-SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEA 172 (251)
Q Consensus 94 ~~~l~-~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~ 172 (251)
.+. + +.|++ +||||+. |+++++.|++++ +++|++|| +++++.++++.++.++++.+++|++++|++|+++++
T Consensus 214 ~~~-l~~~~~i-~iEeP~~--~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i 286 (386)
T 3fv9_G 214 LSL-LPPGLDI-VLEAPCA--SWAETKSLRARC--ALPLLLDE-LIQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQ 286 (386)
T ss_dssp HHH-SCSSCCC-EEECCCS--SHHHHHHHHTTC--CSCEEEST-TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred HHH-hhccCCc-EEecCCC--CHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHH
Confidence 776 6 88999 9999999 899999999998 79999999 789999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 173 VKMSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 173 ~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
+.+|+++|+.+|++|+ -|+.....+.+.++....
T Consensus 287 ~~~A~~~gi~~~~~~~-~es~i~~aa~~hlaaa~~ 320 (386)
T 3fv9_G 287 RAIAAAAGMVMSVQDT-VGSQISFAAILHLAQSTP 320 (386)
T ss_dssp HHHHHHTTCEEEEECS-SCCHHHHHHHHHHHHTSC
T ss_pred HHHHHHcCCEEEeCCC-CCCHHHHHHHHHHHHhCC
Confidence 9999999999999997 577776666665555443
No 68
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=99.78 E-value=2.1e-18 Score=161.04 Aligned_cols=161 Identities=16% Similarity=0.175 Sum_probs=133.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
..++++..+.+.+++ +.||+. ||++|.|+ |.++.+.+ .+.+. .|+|+.+|.++.+.+.+. +
T Consensus 149 ~~~~e~~~~~a~~~~-~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~---d~~l~-----vDan~~~~~~~A~~~~~~-l 218 (389)
T 3ozy_A 149 DLTPDQAADELAGWV-EQGFTAAKLKVGRAPRKDAANLRAMRQRVGA---DVEIL-----VDANQSLGRHDALAMLRI-L 218 (389)
T ss_dssp SCCHHHHHHHHHHHH-HTTCSEEEEECCSCHHHHHHHHHHHHHHHCT---TSEEE-----EECTTCCCHHHHHHHHHH-H
T ss_pred CCCHHHHHHHHHHHH-HCCCCEEeeccCCCHHHHHHHHHHHHHHcCC---CceEE-----EECCCCcCHHHHHHHHHH-H
Confidence 567899999998877 689997 99988543 22333321 23332 247899999998887776 6
Q ss_pred hcCCceeecCCCCcccHHHHHHHH-hhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELT-GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~-~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
++|++.+||||+..+||+++++|+ +++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|+
T Consensus 219 ~~~~i~~iEqP~~~~d~~~~~~l~~~~~--~iPIa~dE-~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~ 295 (389)
T 3ozy_A 219 DEAGCYWFEEPLSIDDIEGHRILRAQGT--PVRIATGE-NLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAA 295 (389)
T ss_dssp HHTTCSEEESCSCTTCHHHHHHHHTTCC--SSEEEECT-TCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHH
T ss_pred HhcCCCEEECCCCcccHHHHHHHHhcCC--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 999999999999999999999999 888 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhhh
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAva 203 (251)
++|+.+|+++ .++.....+.+.++
T Consensus 296 ~~gi~~~~h~--~~~~i~~aa~~hla 319 (389)
T 3ozy_A 296 SAHLAWNPHT--FNDIITVAANLHLV 319 (389)
T ss_dssp HTTCEECCCC--TTSHHHHHHHHHHH
T ss_pred HcCCEEEecC--CCcHHHHHHHHHHH
Confidence 9999999874 46766655544444
No 69
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=99.77 E-value=8.4e-19 Score=163.50 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=129.0
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeee-----ehhh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGM-----DVAA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
++++..+.+.+++ ++||+. ||++|- |++. ++.+.+ .+.+. .|+|+.+|.+|.+++++. ++
T Consensus 165 ~~~~~~~~a~~~~-~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~---~~~l~-----vDan~~~~~~~a~~~~~~-l~ 234 (392)
T 1tzz_A 165 GLSMLRGEMRGYL-DRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGK---DAQLA-----VDANGRFNLETGIAYAKM-LR 234 (392)
T ss_dssp CHHHHHHHHHHHH-TTTCSEEEEECSSSCHHHHHHHHHHHHHHHTT---TCEEE-----EECTTCCCHHHHHHHHHH-HT
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCC---CCeEE-----EECCCCCCHHHHHHHHHH-HH
Confidence 6788888888877 689996 888884 3322 222211 23332 147889999999998887 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhcc----CcceeEeeccccccHHHHHHHHHH
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK----TCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~----a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
+|+|.+||||+.++||++|++|++++ ++||++|| +++++.++++.++.+ +++.+++||+++||+|++++++++
T Consensus 235 ~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~ 311 (392)
T 1tzz_A 235 DYPLFWYEEVGDPLDYALQAALAEFY--PGPMATGE-NLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEV 311 (392)
T ss_dssp TSCCSEEECCSCTTCHHHHHHHTTTC--CSCEEECT-TCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHH
T ss_pred HcCCCeecCCCChhhHHHHHHHHhhC--CCCEEECC-CCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHH
Confidence 99999999999999999999999998 79999999 689999999999999 999999999999999999999999
Q ss_pred HHHcCCc---EEEecCCCCCCchhHhhhhhhcc
Q 040341 176 SKRAGWG---VMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 176 a~~~g~~---~ivs~rsgEt~d~~iadLAva~~ 205 (251)
|+++|+. +|++. .+ -.-+|++.++.
T Consensus 312 A~~~gi~~~~~~~~~-~~----~~~~hl~aa~~ 339 (392)
T 1tzz_A 312 LKTHGWSPSRCIPHG-GH----QMSLNIAAGLG 339 (392)
T ss_dssp HHHTTCCGGGBCCSC-CB----HHHHHHHHHHT
T ss_pred HHHCCCCCceEeecH-HH----HHHHHHHHhCC
Confidence 9999999 99994 10 11166666554
No 70
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=99.77 E-value=2.2e-18 Score=160.95 Aligned_cols=164 Identities=16% Similarity=0.194 Sum_probs=135.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCccee-ecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYD-LNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~-l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++..+.+.+++ +.||+. |+++|.|+ |.++.+.+ .-... ++ +|+.+|.++.+.+.+.
T Consensus 140 ~~~~e~~~~~a~~~~-~~G~~~~KiKvG~~~~~d~~~v~avR~a~g~-~~~l~~vD-------an~~~~~~~A~~~~~~- 209 (391)
T 3gd6_A 140 SEEVESNLDVVRQKL-EQGFDVFRLYVGKNLDADEEFLSRVKEEFGS-RVRIKSYD-------FSHLLNWKDAHRAIKR- 209 (391)
T ss_dssp TTHHHHHHHHHHHHH-HTTCCEEEEECSSCHHHHHHHHHHHHHHHGG-GCEEEEEE-------CTTCSCHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEeeCCCHHHHHHHHHHHHHHcCC-CCcEEEec-------CCCCcCHHHHHHHHHH-
Confidence 567889999999988 689997 99987654 22333322 01234 44 7899999998887776
Q ss_pred hhcCCc--eeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 98 ISDHPI--VSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 98 ~~~ypI--~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
+++|++ .+||||+..+|++++++|++++ +++| || +++++.++++.++.++++.+++|++++|++|++++++.+
T Consensus 210 l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~--~iPI--dE-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~ 284 (391)
T 3gd6_A 210 LTKYDLGLEMIESPAPRNDFDGLYQLRLKT--DYPI--SE-HVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYA 284 (391)
T ss_dssp HTTCCSSCCEEECCSCTTCHHHHHHHHHHC--SSCE--EE-ECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred HHhcCCCcceecCCCChhhHHHHHHHHHHc--CCCc--CC-CCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHH
Confidence 699999 9999999999999999999999 7888 88 799999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 176 SKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 176 a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
|+++|+.+|++++ .|+.....+.+.++...+
T Consensus 285 A~~~gi~~~~~~~-~es~i~~aa~~hlaaa~~ 315 (391)
T 3gd6_A 285 AEVASKDVVLGTT-QELSVGTAAMAHLGCSLT 315 (391)
T ss_dssp HHHTTCEEEECCC-CCCHHHHHHHHHHHTTCS
T ss_pred HHHcCCEEEecCC-CccHHHHHHHHHHHHhCC
Confidence 9999999999885 578777766666554433
No 71
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=99.77 E-value=2.8e-18 Score=160.55 Aligned_cols=164 Identities=13% Similarity=0.159 Sum_probs=136.4
Q ss_pred CCCcHHHHHHH-HHHHHhcCCcc-ceeeee-------eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhH
Q 040341 28 IQESYEGFELL-KTAIAKGGYIG-KIVIGM-------DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGL 90 (251)
Q Consensus 28 ~~~~eeal~~i-~~Ai~~aGy~~-kI~igl-------D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~el 90 (251)
..++++..+.+ .+++ +.||+. |+++|. |+ |.++.+.+ .-...+ |+|+.+|.++.
T Consensus 137 ~~~~e~~~~~a~~~~~-~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~-~~~l~v-------DaN~~~~~~~A 207 (393)
T 4dwd_A 137 ARSVDEVVREVARRVE-AEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGP-DAVIGF-------DANNGYSVGGA 207 (393)
T ss_dssp SSCHHHHHHHHHHHHH-HHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCT-TCCEEE-------ECTTCCCHHHH
T ss_pred CCCHHHHHHHHHHHHH-HcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCC-CCeEEE-------ECCCCCCHHHH
Confidence 35678888988 8877 679997 999886 22 22333322 112333 48899999998
Q ss_pred HHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHH
Q 040341 91 KNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 170 (251)
Q Consensus 91 id~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l 170 (251)
+.+.+. +++|+|.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.+ ++.+++|++++|++|+++
T Consensus 208 ~~~~~~-L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~ 282 (393)
T 4dwd_A 208 IRVGRA-LEDLGYSWFEEPVQHYHVGAMGEVAQRL--DITVSAGE-QTYTLQALKDLILSG-VRMVQPDIVKMGGITGMM 282 (393)
T ss_dssp HHHHHH-HHHTTCSEEECCSCTTCHHHHHHHHHHC--SSEEEBCT-TCCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHH
T ss_pred HHHHHH-HHhhCCCEEECCCCcccHHHHHHHHhhC--CCCEEecC-CcCCHHHHHHHHHcC-CCEEEeCccccCCHHHHH
Confidence 887776 5999999999999999999999999998 79999999 789999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 171 EAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
+++.+|+++|+.+++++. ++.....+.+.++....
T Consensus 283 ~ia~~A~~~gi~~~~h~~--~~~i~~aa~~hlaaa~p 317 (393)
T 4dwd_A 283 QCAALAHAHGVEFVPHQT--QPGVGHFANIHVLSTLM 317 (393)
T ss_dssp HHHHHHHHHTCEECCCCC--CSSHHHHHHHHHHHTCT
T ss_pred HHHHHHHHcCCEEeecCC--CcHHHHHHHHHHHHhCC
Confidence 999999999999998876 68777777777664443
No 72
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=99.77 E-value=4.8e-18 Score=158.00 Aligned_cols=165 Identities=14% Similarity=0.167 Sum_probs=133.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh----hhhcccccCCc-ceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDV----AASEFYDSKDK-TYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~----Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
..++++..+.+.+++ +.||+. ||++|-|+ +.-+..++.-| ...+. .|+|+.+|.++.+.+.+. +++|
T Consensus 143 ~~~~e~~~~~a~~~~-~~G~~~iKiK~G~~~~~d~~~v~avR~a~g~~~~l~-----vDan~~~~~~~a~~~~~~-l~~~ 215 (378)
T 3eez_A 143 AKSVEETRAVIDRYR-QRGYVAHSVKIGGDVERDIARIRDVEDIREPGEIVL-----YDVNRGWTRQQALRVMRA-TEDL 215 (378)
T ss_dssp SCCHHHHHHHHHHHH-HTTCCEEEEECCSCHHHHHHHHHHHTTSCCTTCEEE-----EECTTCCCHHHHHHHHHH-TGGG
T ss_pred CCCHHHHHHHHHHHH-hCCCCEEEeccCCCHHHHHHHHHHHHHHcCCCceEE-----EECCCCCCHHHHHHHHHH-hccC
Confidence 567899999888877 799997 99988553 22222222111 23332 248899999998887776 5999
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW 181 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~ 181 (251)
++ +||||+. ||+++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|+++|+
T Consensus 216 ~i-~iEqP~~--~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~ 289 (378)
T 3eez_A 216 HV-MFEQPGE--TLDDIAAIRPLH--SAPVSVDE-CLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGI 289 (378)
T ss_dssp TC-CEECCSS--SHHHHHHTGGGC--CCCEEECT-TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTC
T ss_pred Ce-EEecCCC--CHHHHHHHHhhC--CCCEEECC-CCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCC
Confidence 99 9999998 999999999998 89999999 789999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCchhHhhhhhhccc
Q 040341 182 GVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 182 ~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+|++|+ .|+.....+.+.++...
T Consensus 290 ~~~~~~~-~es~i~~aa~~hlaaa~ 313 (378)
T 3eez_A 290 DMFVMAT-GGSVLADAEALHLAATI 313 (378)
T ss_dssp EEEEECS-SCSHHHHHHHHHHHHTS
T ss_pred EEEcCCC-CCCHHHHHHHHHHHHhC
Confidence 9999997 57776666555554433
No 73
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=99.77 E-value=2.9e-18 Score=158.89 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=133.5
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeeehh--------hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMDVA--------ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~A--------ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
+.++.++..+.+.++. +.||+. |+++|.|.. .++.+.+ +-...+ |+|+.+|.++.+.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~-~~Gf~~~K~k~g~~~~~di~~v~avr~~~g~-~~~l~v-------DaN~~~~~~~A~~~~~~- 210 (378)
T 4hpn_A 141 NVDRVSDNASEMAERR-AEGFHACKIKIGFGVEEDLRVIAAVREAIGP-DMRLMI-------DANHGYTVTEAITLGDR- 210 (378)
T ss_dssp TCCHHHHHHHHHHHHH-HTTCSEEEEECCSCHHHHHHHHHHHHHHHTT-TSEEEE-------ECTTCCCHHHHHHHHHH-
T ss_pred cchhHHHHHHHHHHHH-HhccceecccccCChHHHHHHHHHHHHhcCC-cEEEEE-------ecCcccCHHHHHHHHhh-
Confidence 4555666777777766 689996 899987763 2333321 123344 48999999999998877
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++|+|.+||||+..+|++++++|++++ +++|++|| ++.++.++++.++.++++.+++|+.++|++|++++++++|+
T Consensus 211 l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~ 287 (378)
T 4hpn_A 211 AAGFGIDWFEEPVVPEQLDAYARVRAGQ--PIPVAGGE-TWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLAT 287 (378)
T ss_dssp HGGGCCSCEECCSCTTCHHHHHHHHHHS--SSCEEECT-TCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHH
T ss_pred hhhcccchhhcCCCccchhhhHHHHhhC--CceeeCCc-CccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHH
Confidence 5999999999999999999999999999 89999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhh--hhhhcccC
Q 040341 178 RAGWGVMASHRSGETEDTFIAD--LSVGLATG 207 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iad--LAva~~~~ 207 (251)
++|+.+ +.|. .++.....+. ++.++...
T Consensus 288 ~~gi~v-~~h~-~~~~i~~aa~~h~~aa~~~~ 317 (378)
T 4hpn_A 288 LHGVRI-VPHV-WGTGVQIAAALQFMAAMTPD 317 (378)
T ss_dssp HHTCEE-CCBC-CSSHHHHHHHHHHHHHCCCS
T ss_pred HcCCeE-EeCC-CCcHHHHHHHHHHHHHcCcc
Confidence 999985 6775 4565555544 44444433
No 74
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=99.77 E-value=3.8e-18 Score=158.34 Aligned_cols=160 Identities=20% Similarity=0.210 Sum_probs=130.7
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeee-----eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGM-----DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
++++..+.+.+++++.||+. |+++|. |+ |.++.+.+ .-...+ |+|+.+|.++.+.+.+. ++
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~-~~~l~v-------Dan~~~~~~~a~~~~~~-l~ 221 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDS-AVRIAI-------DGNGKWDLPTCQRFCAA-AK 221 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCT-TCEEEE-------ECTTCCCHHHHHHHHHH-TT
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCC-CCcEEe-------eCCCCCCHHHHHHHHHH-Hh
Confidence 67899999999884339997 999883 33 23333322 112333 48899999998888777 69
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+|++.+||||+..+|+++++.|++++ .+||++|| +++++.++++.++.++++.+++|++++||+|++++++.+|+++
T Consensus 222 ~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 298 (372)
T 3tj4_A 222 DLDIYWFEEPLWYDDVTSHARLARNT--SIPIALGE-QLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAH 298 (372)
T ss_dssp TSCEEEEESCSCTTCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHT
T ss_pred hcCCCEEECCCCchhHHHHHHHHhhc--CCCEEeCC-CccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999998 79999999 7899999999999999999999999999999999999999999
Q ss_pred CCcEEEecC-CCCCCchhHhhhhhhcc
Q 040341 180 GWGVMASHR-SGETEDTFIADLSVGLA 205 (251)
Q Consensus 180 g~~~ivs~r-sgEt~d~~iadLAva~~ 205 (251)
|+.+|+++. ..|+ -+||+.++.
T Consensus 299 gi~~~~h~g~~~~~----~~~l~aa~~ 321 (372)
T 3tj4_A 299 RLPVVPHAGEMSQV----HVHLSYWHP 321 (372)
T ss_dssp TCCBCCCCTTTTTT----HHHHHHHCT
T ss_pred CCEEEecCchHHHH----HHHHhhhCC
Confidence 999998761 1233 356666553
No 75
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=99.77 E-value=6.4e-18 Score=158.04 Aligned_cols=162 Identities=16% Similarity=0.226 Sum_probs=133.3
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeee-eh--------hhhcccc-cCCcceeecCCCCCCCCCCccChhhHHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGM-DV--------AASEFYD-SKDKTYDLNFKEENNDGSQKVSGDGLKNVYR 95 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~--------Aase~~~-~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~ 95 (251)
.+.++++..+.+.+++ +.||+. |+++|. |+ |.++.+. + .-...+ |+|+.+|.++.+.+.+
T Consensus 161 ~~~~~e~~~~~a~~~~-~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~-~~~L~v-------DaN~~w~~~~A~~~~~ 231 (391)
T 4e8g_A 161 GIGQPDEIARIAAEKV-AEGFPRLQIKIGGRPVEIDIETVRKVWERIRGT-GTRLAV-------DGNRSLPSRDALRLSR 231 (391)
T ss_dssp CSCCHHHHHHHHHHHH-HTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTT-TCEEEE-------ECTTCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-HcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCC-CCeEEE-------eCCCCCCHHHHHHHHH
Confidence 3567899999999987 689997 999885 42 2223332 1 123344 4899999999888777
Q ss_pred HhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 96 SFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 96 ~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
. +++|++ +||||+ +||++++.|++++ ++||++|| ++.++.++++.++.++++.+++|++++|++|++++++.+
T Consensus 232 ~-L~~~~i-~iEeP~--~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~ 304 (391)
T 4e8g_A 232 E-CPEIPF-VLEQPC--NTLEEIAAIRGRV--QHGIYLDE-SGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDI 304 (391)
T ss_dssp H-CTTSCE-EEESCS--SSHHHHHHHGGGC--CSCEEEST-TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHH
T ss_pred H-HhhcCe-EEecCC--ccHHHHHHHHhhC--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHH
Confidence 7 599999 999996 5999999999998 89999999 789999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEecCCCCCCchhHh--hhhhhcc
Q 040341 176 SKRAGWGVMASHRSGETEDTFIA--DLSVGLA 205 (251)
Q Consensus 176 a~~~g~~~ivs~rsgEt~d~~ia--dLAva~~ 205 (251)
|+++|+.+|++++ .|+.....+ |||.++.
T Consensus 305 A~~~gi~~~~~~~-~es~i~~aa~~hlaaa~p 335 (391)
T 4e8g_A 305 CEARALPHSCDDA-WGGDIIAAACTHIGATVQ 335 (391)
T ss_dssp HHHTTCCEEEECS-SCSHHHHHHHHHHHTTSC
T ss_pred HHHcCCeEEeCCc-CCCHHHHHHHHHHHHhCC
Confidence 9999999999987 477766655 5555443
No 76
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=99.76 E-value=3.3e-18 Score=160.26 Aligned_cols=164 Identities=14% Similarity=0.200 Sum_probs=136.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee----------------------------h----hhhcccccCCcceeecC
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD----------------------------V----AASEFYDSKDKTYDLNF 74 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD----------------------------~----Aase~~~~~~g~Y~l~~ 74 (251)
..++++..+.+.+++ +.||+. |+++|.+ + |.++.+.+ .+.|.
T Consensus 131 ~~~~e~~~~~a~~~~-~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~---d~~l~- 205 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFL-EKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN---QFHIL- 205 (401)
T ss_dssp ESSHHHHHHHHHHHH-HTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT---SSEEE-
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC---CCEEE-
Confidence 357899999999988 689997 9998753 1 22232321 23332
Q ss_pred CCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcc
Q 040341 75 KEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 154 (251)
Q Consensus 75 ~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n 154 (251)
.|+|+.+|.++.+.+.+. +++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++
T Consensus 206 ----vDan~~~~~~~A~~~~~~-L~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d 277 (401)
T 3sbf_A 206 ----HDVHERLFPNQAIQFAKE-VEQYKPYFIEDILPPNQTEWLDNIRSQS--SVSLGLGE-LFNNPEEWKSLIANRRID 277 (401)
T ss_dssp ----EECTTCSCHHHHHHHHHH-HGGGCCSCEECSSCTTCGGGHHHHHTTC--CCCEEECT-TCCSHHHHHHHHHTTCCS
T ss_pred ----EECCCCCCHHHHHHHHHH-HHhcCCCEEECCCChhHHHHHHHHHhhC--CCCEEeCC-ccCCHHHHHHHHhcCCCC
Confidence 248899999999887777 5999999999999999999999999998 79999999 789999999999999999
Q ss_pred eeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 155 ALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 155 ~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
.+++|++++|++|++++++.+|+++|+.+++++...++.....|.+.++.
T Consensus 278 ~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~~~s~i~~aA~~hlaa 327 (401)
T 3sbf_A 278 FIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAPDMTPIGAAVNTHLNV 327 (401)
T ss_dssp EECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCTTSCHHHHHHHHHHHH
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCEEEecCCcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999988765467776666655554
No 77
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=99.76 E-value=3.2e-18 Score=159.61 Aligned_cols=159 Identities=17% Similarity=0.190 Sum_probs=131.8
Q ss_pred CCCcHHHHHHHHHHHHhc-CCcc-ceeeee-----eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 28 IQESYEGFELLKTAIAKG-GYIG-KIVIGM-----DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~a-Gy~~-kI~igl-----D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
+.++++..+.+.+++ +. ||+. |+++|. |+ |.++.+.+ .-...+ |+|+.+|.++.+.+.+.
T Consensus 165 ~~~~e~~~~~a~~~~-~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~-~~~l~v-------DaN~~~~~~~A~~~~~~ 235 (383)
T 3toy_A 165 VLDARDDERTLRTAC-DEHGFRAIKSKGGHGDLATDEAMIKGLRALLGP-DIALML-------DFNQSLDPAEATRRIAR 235 (383)
T ss_dssp SCCHHHHHHHHHHHH-HTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCT-TSEEEE-------ECTTCSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-HccCCcEEEEecCCCCHHHHHHHHHHHHHHhCC-CCeEEE-------eCCCCCCHHHHHHHHHH
Confidence 367899999999988 56 9997 999885 33 23333321 112333 48999999998888777
Q ss_pred hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 97 FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 97 l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
+++|+|.+||||+..+|+++++.|++++ .+||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|
T Consensus 236 -l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A 311 (383)
T 3toy_A 236 -LADYDLTWIEEPVPQENLSGHAAVRERS--EIPIQAGE-NWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQA 311 (383)
T ss_dssp -HGGGCCSEEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHH
T ss_pred -HHhhCCCEEECCCCcchHHHHHHHHhhc--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHH
Confidence 5999999999999999999999999998 79999999 7899999999999999999999999999999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 177 KRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+++|+.+++++. .| .-++|+.++
T Consensus 312 ~~~gi~~~~h~~-~~----a~lhl~aa~ 334 (383)
T 3toy_A 312 DAASIPMSSHIL-PE----ASAHVLPVT 334 (383)
T ss_dssp HHHTCCBCCCSC-HH----HHHHHGGGC
T ss_pred HHcCCEEeecCH-HH----HHHHHHHhC
Confidence 999999998765 22 235555554
No 78
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=99.76 E-value=2.5e-18 Score=159.64 Aligned_cols=161 Identities=14% Similarity=0.170 Sum_probs=132.5
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeee---ee----h----hhhcccccCCcceeecCCCCCCCCCCccC-hhhHHHHHH
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIG---MD----V----AASEFYDSKDKTYDLNFKEENNDGSQKVS-GDGLKNVYR 95 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~ig---lD----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s-~~elid~~~ 95 (251)
+++++..+.+.+++ +.||+. |+++| -| + |.++.+.+ .+.+. .|+|+.+| .++.+.+.+
T Consensus 145 ~~~e~~~~~a~~~~-~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~---~~~l~-----vDan~~~~d~~~A~~~~~ 215 (374)
T 3sjn_A 145 DKPEDNVAIVQGLK-DQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGP---EMEVQ-----IDLASKWHTCGHSAMMAK 215 (374)
T ss_dssp SSGGGGHHHHHHHH-TTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCS---SSEEE-----EECTTTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCC---CCeEE-----EECCCCCCCHHHHHHHHH
Confidence 34588888898887 679997 89887 22 2 22333321 23332 24789999 999888777
Q ss_pred HhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 96 SFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 96 ~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
. +++|++.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+
T Consensus 216 ~-l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~ 291 (374)
T 3sjn_A 216 R-LEEFNLNWIEEPVLADSLISYEKLSRQV--SQKIAGGE-SLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDI 291 (374)
T ss_dssp H-SGGGCCSEEECSSCTTCHHHHHHHHHHC--SSEEEECT-TCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHH
T ss_pred H-hhhcCceEEECCCCcccHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHH
Confidence 6 6999999999999999999999999998 89999999 689999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 176 SKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 176 a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
|+++|+.+|+++. ++.....+.+.++.
T Consensus 292 A~~~gi~~~~h~~--~~~i~~aa~~hlaa 318 (374)
T 3sjn_A 292 AQMNGTQLIPHGF--STGILLHASVHFLA 318 (374)
T ss_dssp HHHHTCEECCBCC--SCHHHHHHHHHHHH
T ss_pred HHHcCCEEEecCC--CcHHHHHHHHHHHH
Confidence 9999999999776 67666666555543
No 79
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=99.76 E-value=4.9e-18 Score=157.21 Aligned_cols=163 Identities=16% Similarity=0.231 Sum_probs=134.9
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeeehh---------hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMDVA---------ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~A---------ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
.+.++++..+.+.+++++.||+. |+++|-|.. .++.+.+ .+.+. .|+|+.+|.++.+.+.+.
T Consensus 136 ~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~---~~~l~-----vDan~~~~~~~a~~~~~~ 207 (367)
T 3dg3_A 136 GFDDPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGD---AIELY-----VDGNRGWSAAESLRAMRE 207 (367)
T ss_dssp ESSCHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGG---GSEEE-----EECTTCSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCC---CCEEE-----EECCCCCCHHHHHHHHHH
Confidence 35678999999999884449997 999986542 2333321 23332 248899999998887776
Q ss_pred hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 97 FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 97 l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
+++|+|.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++ |+|++++++.+|
T Consensus 208 -l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A 282 (367)
T 3dg3_A 208 -MADLDLLFAEELCPADDVLSRRRLVGQL--DMPFIADE-SVPTPADVTREVLGGSATAISIKTART-GFTGSTRVHHLA 282 (367)
T ss_dssp -TTTSCCSCEESCSCTTSHHHHHHHHHHC--SSCEEECT-TCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHH
T ss_pred -HHHhCCCEEECCCCcccHHHHHHHHHhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHH
Confidence 6999999999999999999999999998 79999999 789999999999999999999999999 999999999999
Q ss_pred HHcCCcEEEecCCCCCCchhHhhhhhh
Q 040341 177 KRAGWGVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 177 ~~~g~~~ivs~rsgEt~d~~iadLAva 203 (251)
+++|+.+|++++ -|+.....+.+.++
T Consensus 283 ~~~gi~~~~~~~-~es~i~~aa~~hla 308 (367)
T 3dg3_A 283 EGLGLDMVMGNQ-IDGQIGTACTVSFG 308 (367)
T ss_dssp HHHTCEEEECCS-SCCHHHHHHHHHHH
T ss_pred HHcCCeEEECCc-CCcHHHHHHHHHHH
Confidence 999999999985 57766655554443
No 80
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=99.75 E-value=1.1e-17 Score=154.58 Aligned_cols=168 Identities=13% Similarity=0.151 Sum_probs=136.7
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
.+.++.++...+.+.+.||+. |+++|. +. +.++.+.+ +-...+ |+|+.+|.++.+.+.+. +
T Consensus 141 ~~~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~-~~~l~v-------DaN~~~~~~~A~~~~~~-l 211 (370)
T 2chr_A 141 GDTKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGS-KAYLRV-------DVNQAWDEQVASVYIPE-L 211 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTT-TSEEEE-------ECTTCCCTHHHHHHHHH-H
T ss_pred CchhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHhcCC-CcEEEe-------cCCCCCCHHHHHHHHHH-H
Confidence 345666666666777899996 899884 22 22222222 122344 48999999999888777 5
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|+|.+||||+..+|++++++|++++ +++|++|| ++.++.++++.++.++++.+++|+.++||+|++++++++|++
T Consensus 212 ~~~~~~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~ 288 (370)
T 2chr_A 212 EALGVELIEQPVGRENTQALRRLSDNN--RVAIMADE-SLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEA 288 (370)
T ss_dssp HTTTCCEEECCSCSSCHHHHHHHHHHC--SSEEEESS-SCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHH
T ss_pred HhcCCceecCCCChhhhhhhhHHhhhc--cCCccCCc-cCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999 89999999 789999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
+|+.+|++|. .|+.....+.+.++...+.+
T Consensus 289 ~gi~~~~~~~-~~~~i~~aa~~hlaa~~p~~ 318 (370)
T 2chr_A 289 SGIASYGGTM-LDSTIGTSVALQLYSTVPSL 318 (370)
T ss_dssp HTCEECCCCC-SCCHHHHHHHHHHHTTSSCC
T ss_pred cCCeEEeCCC-cccHHHHHHHHHHHHhCCCC
Confidence 9999999886 57777777776666555443
No 81
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=99.75 E-value=5.5e-18 Score=160.02 Aligned_cols=163 Identities=9% Similarity=0.106 Sum_probs=135.7
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-------------------------------------eh----hhhcccccC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-------------------------------------DV----AASEFYDSK 66 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-------------------------------------D~----Aase~~~~~ 66 (251)
.++++..+.+.+++ +.||+. |+++|. |+ |.++.+.+
T Consensus 148 ~~~e~~~~~a~~~~-~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~- 225 (424)
T 3v3w_A 148 KDLDSTLEAVRKAK-DKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGP- 225 (424)
T ss_dssp SSHHHHHHHHHHHH-HTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCS-
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCC-
Confidence 57899999999988 689997 898874 11 22222321
Q ss_pred CcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHH
Q 040341 67 DKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEK 146 (251)
Q Consensus 67 ~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~ 146 (251)
.+.|. .|+|+.+|.+|.+.+.+. +++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++
T Consensus 226 --d~~l~-----vDaN~~~~~~~A~~~~~~-L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~ 294 (424)
T 3v3w_A 226 --DIHLL-----HDVHHRLTPIEAARLGKA-LEPYHLFWMEDAVPAENQESFKLIRQHT--TTPLAVGE-VFNSIHDCRE 294 (424)
T ss_dssp --SSEEE-----EECTTCCCHHHHHHHHHH-HGGGCCSEEECCSCCSSTTHHHHHHHHC--CSCEEECT-TCCSGGGTHH
T ss_pred --CCcEE-----EeCCCCCCHHHHHHHHHH-HHhcCCCEEECCCChHhHHHHHHHHhhC--CCCEEEcc-CcCCHHHHHH
Confidence 23332 248899999999887777 5999999999999999999999999998 79999999 6899999999
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
.++.++++.+++|++++|++|++++++.+|+++|+.+|+++...++.....|.+.++.
T Consensus 295 ~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaa 352 (424)
T 3v3w_A 295 LIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGATDLSPVCMGAALHFDY 352 (424)
T ss_dssp HHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCTTSCHHHHHHHHHHHH
T ss_pred HHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCCcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998875567776666665554
No 82
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=99.75 E-value=8.3e-18 Score=157.75 Aligned_cols=164 Identities=12% Similarity=0.134 Sum_probs=135.2
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----------------h----hhhcccccCCcceeecCCCCCCCCCCc
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMD-----------------V----AASEFYDSKDKTYDLNFKEENNDGSQK 84 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----------------~----Aase~~~~~~g~Y~l~~~~~~~d~~~~ 84 (251)
.+.++++..+.+.+++ +.||+. |+++|-+ + |.++.+.+ .+.|. .|+|+.
T Consensus 148 ~~~~~e~~~~~a~~~~-~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~---d~~l~-----vDan~~ 218 (404)
T 4e5t_A 148 VYNDADMAAEAAAKAV-DQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGT---KADLL-----FGTHGQ 218 (404)
T ss_dssp TTTCHHHHHHHHHHHH-HHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGG---GSEEE-----ECCCSC
T ss_pred cCCCHHHHHHHHHHHH-HcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCC---CCeEE-----EeCCCC
Confidence 4578899999999988 689997 8988743 2 22333321 23333 258999
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 164 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiG 164 (251)
+|.+|.+.+.+. +++|++.+||||+..+|++++++|++++ +++|++|| +++++.++++.++.++++.+++|++++|
T Consensus 219 ~~~~~A~~~~~~-l~~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~~d~~~~G 294 (404)
T 4e5t_A 219 FTVSGAKRLARR-LEAYDPLWFEEPIPPEKPEDMAEVARYT--SIPVATGE-RLCTKYEFSRVLETGAASILQMNLGRVG 294 (404)
T ss_dssp BCHHHHHHHHHH-HGGGCCSEEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCHHHHHHHHHHHTCCSEECCCTTTSS
T ss_pred cCHHHHHHHHHH-HhhcCCcEEECCCCcccHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHhCCCCEEecCccccC
Confidence 999998887776 6999999999999999999999999999 89999999 7899999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 165 SVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
++|++++++.+|+++|+.+++.+. ++.....+.+.++..
T Consensus 295 Git~~~~ia~~A~~~gi~~~~h~~--~s~i~~aa~~hlaaa 333 (404)
T 4e5t_A 295 GLLEAKKIAAMAECHSAQIAPHLY--CGPLVALANIQLATC 333 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEECCCCS--SCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCEEeecCC--CcHHHHHHHHHHHHh
Confidence 999999999999999999876643 466666666666543
No 83
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=99.75 E-value=8.2e-18 Score=159.59 Aligned_cols=165 Identities=15% Similarity=0.164 Sum_probs=135.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeeeeh------------------------------------------------
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGMDV------------------------------------------------ 57 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~------------------------------------------------ 57 (251)
...++++..+.+.+++ +.||+. |+++|.+.
T Consensus 152 ~~~~~e~~~~~a~~~~-~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v 230 (440)
T 3t6c_A 152 DGADEVEVEDSARAKM-EEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLF 230 (440)
T ss_dssp CCSSHHHHHHHHHHHH-HTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-HcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 3467899999999987 689996 88887421
Q ss_pred -hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccc
Q 040341 58 -AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDL 136 (251)
Q Consensus 58 -Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl 136 (251)
|.++.+.+ ...|. .|+|+.+|.++.+.+.+. +++|+|.+||||+..+|+++++.|++++ ++||++||
T Consensus 231 ~avR~a~G~---d~~L~-----vDaN~~~~~~~A~~~~~~-L~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE- 298 (440)
T 3t6c_A 231 DHLRNKLGF---SVELL-----HDAHERITPINAIHMAKA-LEPYQLFFLEDPVAPENTEWLKMLRQQS--STPIAMGE- 298 (440)
T ss_dssp HHHHHHHCS---SSEEE-----EECTTCSCHHHHHHHHHH-TGGGCCSEEECSSCGGGGGGHHHHHHHC--CSCEEECT-
T ss_pred HHHHHhcCC---CCeEE-----EECCCCCCHHHHHHHHHH-hhhcCCCEEECCCChhhHHHHHHHHhhc--CCCEEeCc-
Confidence 11222211 12222 258999999999887777 5999999999999999999999999998 79999999
Q ss_pred cccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 137 LVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 137 ~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+++++.++++.++.++++.+++|++++|++|++++++.+|+++|+.+++++..-++.....|.+.++.
T Consensus 299 ~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~Ig~aa~~hlaa 366 (440)
T 3t6c_A 299 LFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSPGDISPIGVCANMHLDL 366 (440)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCSSSSCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccCCCccHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999888875567776666555544
No 84
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=99.75 E-value=5.8e-18 Score=159.52 Aligned_cols=163 Identities=12% Similarity=0.090 Sum_probs=135.4
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-------------------------------------eh----hhhcccccC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-------------------------------------DV----AASEFYDSK 66 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-------------------------------------D~----Aase~~~~~ 66 (251)
.++++..+.+.+++ +.||+. |+++|. |+ |.++.+.+
T Consensus 142 ~~~e~~~~~a~~~~-~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~- 219 (418)
T 3r4e_A 142 SDIAETVEAVGHYI-DMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGF- 219 (418)
T ss_dssp SSHHHHHHHHHHHH-HTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCS-
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCC-
Confidence 56899999999988 689997 888874 11 22232321
Q ss_pred CcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHH
Q 040341 67 DKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEK 146 (251)
Q Consensus 67 ~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~ 146 (251)
.+.|. .|+|+.+|.+|.+.+.+. +++|++.+||||+..+|+++++.|++++ ++||++|| +++++.++++
T Consensus 220 --d~~l~-----vDaN~~~~~~~A~~~~~~-L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~ 288 (418)
T 3r4e_A 220 --DHHLL-----HDGHHRYTPQEAANLGKM-LEPYQLFWLEDCTPAENQEAFRLVRQHT--VTPLAVGE-IFNTIWDAKD 288 (418)
T ss_dssp --SSEEE-----EECTTCSCHHHHHHHHHH-HGGGCCSEEESCSCCSSGGGGHHHHHHC--CSCEEECT-TCCSGGGTHH
T ss_pred --CCeEE-----EeCCCCCCHHHHHHHHHH-HHhhCCCEEECCCCccCHHHHHHHHhcC--CCCEEEcC-CcCCHHHHHH
Confidence 23332 248899999999887777 5999999999999999999999999998 79999999 6899999999
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
.++.++++.+++|++++|++|++++++.+|+++|+.+|+++...++.....|.+.++.
T Consensus 289 ~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaa 346 (418)
T 3r4e_A 289 LIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPTDLSPVTMGCALHFDT 346 (418)
T ss_dssp HHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHH
T ss_pred HHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875567676665555554
No 85
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=99.74 E-value=8.8e-18 Score=159.01 Aligned_cols=147 Identities=19% Similarity=0.291 Sum_probs=123.6
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhc
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD 100 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ 100 (251)
++++..+...+++ ++||+. ||++|-|+ +.++.+.+ .+.|. .|+|+.+|.+|.+++++. +++
T Consensus 198 ~~e~~~~~a~~~~-~~Gf~~vKik~g~~~~~d~e~v~avR~a~G~---d~~l~-----vDan~~~~~~~a~~~~~~-l~~ 267 (441)
T 2hxt_A 198 SDEKLVRLAKEAV-ADGFRTIKLKVGANVQDDIRRCRLARAAIGP---DIAMA-----VDANQRWDVGPAIDWMRQ-LAE 267 (441)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEECCSCHHHHHHHHHHHHHHHCS---SSEEE-----EECTTCCCHHHHHHHHHT-TGG
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEccCCCHHHHHHHHHHHHHhcCC---CCeEE-----EECCCCCCHHHHHHHHHH-HHh
Confidence 5788888888877 689996 89887543 22332321 23332 247899999999998887 699
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
|+|.+||||+..+||++|+.|+++++ .+||++|| +++++.++++.++.++++.++||++++||+||+++++.+|+++|
T Consensus 268 ~~i~~iEqP~~~~d~~~~~~l~~~~~-~iPIa~dE-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g 345 (441)
T 2hxt_A 268 FDIAWIEEPTSPDDVLGHAAIRQGIT-PVPVSTGE-HTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLAILLLAAKFG 345 (441)
T ss_dssp GCCSCEECCSCTTCHHHHHHHHHHHT-TSCEEECT-TCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHHHHHHHHHTT
T ss_pred cCCCeeeCCCCHHHHHHHHHHHhhCC-CCCEEEeC-CcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999983 49999999 69999999999999999999999999999999999999999999
Q ss_pred CcEEEecCC
Q 040341 181 WGVMASHRS 189 (251)
Q Consensus 181 ~~~ivs~rs 189 (251)
+.++ .|.+
T Consensus 346 ~~~~-~h~~ 353 (441)
T 2hxt_A 346 VRVF-PHAG 353 (441)
T ss_dssp CEEC-CCCC
T ss_pred CeEE-EecC
Confidence 9986 5653
No 86
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=99.74 E-value=2.1e-18 Score=157.12 Aligned_cols=156 Identities=17% Similarity=0.193 Sum_probs=120.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-----ehhh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-----DVAA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++++..+.+.+ ..||+. ||++|. |++. ++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 113 ~~~~~~~~~~a~~---~~G~~~~KiKvG~~~~~~d~~~v~avr~~~~~--~~l~v-------DaN~~~~~~~A~~~~~~- 179 (322)
T 1r6w_A 113 NGDPDDLILKLAD---MPGEKVAKVRVGLYEAVRDGMVVNLLLEAIPD--LHLRL-------DANRAWTPLKGQQFAKY- 179 (322)
T ss_dssp CSCHHHHHHHHHT---CCSSEEEEEECSSSCHHHHHHHHHHHHHHCTT--EEEEE-------ECTTCBCHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHH---hCCCceEEEEeCCCCHHHHHHHHHHHHHhCCC--CeEEE-------eCCCCCCHHHHHHHHHH-
Confidence 3466665554443 379986 899885 4432 333321 22333 48999999999998776
Q ss_pred hhcC---CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 98 ISDH---PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 98 ~~~y---pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+++| +|.+||||+. ++++|+.|++++ ++||++||. +.+++ + +.++.++++.+++||+++||+|+++++++
T Consensus 180 l~~~~~~~i~~iEqP~~--~~~~~~~l~~~~--~ipIa~dE~-~~~~~-~-~~~~~~a~d~i~ik~~~~GGit~~~~ia~ 252 (322)
T 1r6w_A 180 VNPDYRDRIAFLEEPCK--TRDDSRAFARET--GIAIAWDES-LREPD-F-AFVAEEGVRAVVIKPTLTGSLEKVREQVQ 252 (322)
T ss_dssp SCTTTGGGEEEEECCBS--SHHHHHHHHHHH--CCCEEESGG-GGSTT-C-CCCCCTTEEEEEECHHHHCCHHHHHHHHH
T ss_pred hhhhccCCeeEEECCCC--ChHHHHHHHHhC--CCCEEeCCC-CCChh-H-hhhhcCCCCEEEECchhcCCHHHHHHHHH
Confidence 5998 9999999997 589999999999 799999995 44555 4 44588999999999999999999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchh--Hhhhhhhc
Q 040341 175 MSKRAGWGVMASHRSGETEDTF--IADLSVGL 204 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~--iadLAva~ 204 (251)
+|+++|+.+|++++. ||.... .+|||.++
T Consensus 253 ~A~~~gi~~~~~~~~-es~ig~aa~~hlaa~~ 283 (322)
T 1r6w_A 253 AAHALGLTAVISSSI-ESSLGLTQLARIAAWL 283 (322)
T ss_dssp HHHHTTCEEEEBCSS-CCHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECcc-ccHHHHHHHHHHHHhc
Confidence 999999999999985 787544 45555554
No 87
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=99.74 E-value=6.7e-18 Score=159.37 Aligned_cols=164 Identities=15% Similarity=0.170 Sum_probs=136.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee----------------------------h----hhhcccccCCcceeecC
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD----------------------------V----AASEFYDSKDKTYDLNF 74 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD----------------------------~----Aase~~~~~~g~Y~l~~ 74 (251)
..++++..+.+.+++ +.||+. |+++|.+ + |.++.+.+ .+.|.
T Consensus 152 ~~~~e~~~~~a~~~~-~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~---d~~L~- 226 (422)
T 3tji_A 152 GETLEALFASVDALI-AQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGW---KLHIL- 226 (422)
T ss_dssp ESSHHHHHHHHHHHH-HTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCS---SSEEE-
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCC---CCEEE-
Confidence 357899999999988 689997 9998753 1 22222221 23332
Q ss_pred CCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcc
Q 040341 75 KEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 154 (251)
Q Consensus 75 ~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n 154 (251)
.|+|+.+|.+|.+.+.+. +++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++
T Consensus 227 ----vDaN~~~~~~~A~~~~~~-Le~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~ll~~ga~d 298 (422)
T 3tji_A 227 ----HDVHERLFPQQAVQLAKQ-LEPFQPYFIEDILPPQQSAWLEQVRQQS--CVPLALGE-LFNNPAEWHDLIVNRRID 298 (422)
T ss_dssp ----EECTTCSCHHHHHHHHHH-HGGGCCSEEECCSCGGGGGGHHHHHHHC--CCCEEECT-TCCSGGGTHHHHHTTCCS
T ss_pred ----EECCCCCCHHHHHHHHHH-HHhhCCCeEECCCChhhHHHHHHHHhhC--CCCEEEeC-CcCCHHHHHHHHhcCCCC
Confidence 248899999999887777 6999999999999999999999999998 79999999 789999999999999999
Q ss_pred eeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 155 ALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 155 ~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
.+++|++++|++|++++++.+|+++|+.+++++...++.....|.+.++.
T Consensus 299 ~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~~~s~Ig~aA~~hlaa 348 (422)
T 3tji_A 299 FIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPGDMTPIGVAVNTHLNI 348 (422)
T ss_dssp EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHHHHHHHHHH
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCEEEecCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999988875577777666666554
No 88
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=99.74 E-value=6.3e-18 Score=159.62 Aligned_cols=163 Identities=11% Similarity=0.084 Sum_probs=135.5
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-------------------------------------eh----hhhcccccC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-------------------------------------DV----AASEFYDSK 66 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-------------------------------------D~----Aase~~~~~ 66 (251)
.++++..+.+.+++ +.||+. |+++|. |+ |.++.+.+
T Consensus 149 ~~~e~~~~~a~~~~-~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~- 226 (425)
T 3vcn_A 149 ETIEDTIAEAVKYK-AMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGW- 226 (425)
T ss_dssp SSHHHHHHHHHHHH-HTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCS-
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCC-
Confidence 57899999999988 689997 898874 11 12222211
Q ss_pred CcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHH
Q 040341 67 DKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEK 146 (251)
Q Consensus 67 ~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~ 146 (251)
.+.|. .|+|+.+|.+|.+.+.+. +++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++
T Consensus 227 --d~~l~-----vDaN~~~~~~~A~~~~~~-L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~ 295 (425)
T 3vcn_A 227 --DVHLL-----HDVHHRLTPIEAARLGKD-LEPYRLFWLEDSVPAENQAGFRLIRQHT--TTPLAVGE-IFAHVWDAKQ 295 (425)
T ss_dssp --SSEEE-----EECTTCCCHHHHHHHHHH-HGGGCCSEEECCSCCSSTTHHHHHHHHC--CSCEEECT-TCCSGGGTHH
T ss_pred --CCEEE-----EECCCCCCHHHHHHHHHH-HHhcCCCEEECCCChhhHHHHHHHHhcC--CCCEEeCC-CcCCHHHHHH
Confidence 23332 248899999999887776 6999999999999999999999999999 89999999 7899999999
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
.++.++++.+++|++++|++|++++++.+|+++|+.+|+++...++.....|.+.++.
T Consensus 296 ~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaa 353 (425)
T 3vcn_A 296 LIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGATDLSPVTMAAALHFDM 353 (425)
T ss_dssp HHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCTTSCHHHHHHHHHHHH
T ss_pred HHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCCcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988875467777666665554
No 89
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=99.74 E-value=1.2e-17 Score=157.03 Aligned_cols=163 Identities=13% Similarity=0.096 Sum_probs=134.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee-----------------h----hhhcccccCCcceeecCCCCCCCCCCcc
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD-----------------V----AASEFYDSKDKTYDLNFKEENNDGSQKV 85 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD-----------------~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~ 85 (251)
+.++++..+.+.+++ +.||+. |+++|-+ + |.++.+.+ .+.|. .|+|+.+
T Consensus 142 ~~~~e~~~~~a~~~~-~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~---d~~l~-----vDaN~~~ 212 (412)
T 4e4u_A 142 YDDPDLAAECAAENV-KLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGS---KADLL-----FGTHGQM 212 (412)
T ss_dssp SSCHHHHHHHHHHHH-HHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTT---SSEEE-----ECCCSCB
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCC---CCeEE-----EECCCCC
Confidence 468899999999988 689997 8888743 2 22333321 23333 2589999
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS 165 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGt 165 (251)
|.+|.+.+.+. +++|++.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|+
T Consensus 213 ~~~~A~~~~~~-L~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~~d~~~~GG 288 (412)
T 4e4u_A 213 VPSSAIRLAKR-LEKYDPLWFEEPVPPGQEEAIAQVAKHT--SIPIATGE-RLTTKYEFHKLLQAGGASILQLNVARVGG 288 (412)
T ss_dssp CHHHHHHHHHH-HGGGCCSEEECCSCSSCHHHHHHHHHTC--SSCEEECT-TCCHHHHHHHHHHTTCCSEECCCTTTTTS
T ss_pred CHHHHHHHHHH-hhhcCCcEEECCCChhhHHHHHHHHhhC--CCCEEecC-ccCCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 99998887776 6999999999999999999999999998 89999999 78999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
+|++++++.+|+++|+.+++++ .++.....+.+.++..
T Consensus 289 it~~~kia~~A~~~gi~v~~h~--~~s~i~~aa~~hlaaa 326 (412)
T 4e4u_A 289 LLEAKKIATLAEVHYAQIAPHL--YNGPVGAAASIQLATC 326 (412)
T ss_dssp HHHHHHHHHHHHHTTCEECCCC--CSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEecC--CCcHHHHHHHHHHHHh
Confidence 9999999999999999987764 3566666666666543
No 90
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=99.74 E-value=9.6e-18 Score=156.73 Aligned_cols=147 Identities=19% Similarity=0.287 Sum_probs=126.1
Q ss_pred CCcHHHHHHHHHHHHhc---CCcc-ceeeee-----eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHH
Q 040341 29 QESYEGFELLKTAIAKG---GYIG-KIVIGM-----DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYR 95 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~a---Gy~~-kI~igl-----D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~ 95 (251)
.++++..+.+.+++ +. ||+. |+++|. |+ |.++.+.+ .-...+ |+|+.+|.++.+.+.+
T Consensus 170 ~~~e~~~~~a~~~~-~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~-~~~l~v-------DaN~~~~~~~A~~~~~ 240 (390)
T 3ugv_A 170 SPAEVAAEAVELKA-EGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGR-DTALMV-------DFNQGLDMAEAMHRTR 240 (390)
T ss_dssp CHHHHHHHHHHHHH-TTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCT-TSEEEE-------ECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCC-CCEEEE-------ECCCCCCHHHHHHHHH
Confidence 57789999999988 56 9997 999885 33 22333321 112333 4899999999888887
Q ss_pred HhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 96 SFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 96 ~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
. +++|+|.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+
T Consensus 241 ~-l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~ 316 (390)
T 3ugv_A 241 Q-IDDLGLEWIEEPVVYDNFDGYAQLRHDL--KTPLMIGE-NFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGV 316 (390)
T ss_dssp H-HTTSCCSEEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHH
T ss_pred H-HHhhCCCEEECCCCcccHHHHHHHHHhc--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHH
Confidence 7 5999999999999999999999999998 79999999 789999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEecC
Q 040341 176 SKRAGWGVMASHR 188 (251)
Q Consensus 176 a~~~g~~~ivs~r 188 (251)
|+++|+.+|+++.
T Consensus 317 A~~~gi~~~~h~~ 329 (390)
T 3ugv_A 317 AGAWGIPMSTHLY 329 (390)
T ss_dssp HHHHTCCBCCBSC
T ss_pred HHHcCCEEeecCH
Confidence 9999999998775
No 91
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=99.74 E-value=2.1e-17 Score=156.82 Aligned_cols=158 Identities=14% Similarity=0.181 Sum_probs=131.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-e----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-D----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
+.++|+..+.+.+++++.||+. ||++|. + + |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 186 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd--~~L~v-------DaN~~w~~~~Ai~~~~~- 255 (441)
T 3vc5_A 186 ALDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPG--LPLRL-------DPNAAWTVETSIRVGRA- 255 (441)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHSTT--CCEEE-------ECTTCSCHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCC--CcEec-------cCCCCCCHHHHHHHHHH-
Confidence 4688999999999886679997 999885 3 3 33444432 23444 48999999999998887
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++| +.+||||+. |++++++|++++ .+||+.|| +++++.++++.++.++++.+++|+.++|++||+++++.+|+
T Consensus 256 L~~~-l~~iEeP~~--~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~ 329 (441)
T 3vc5_A 256 LDGV-LEYLEDPTP--GIDGMARVAAEV--PMPLATNM-CVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCA 329 (441)
T ss_dssp TTTT-CSEEECCSS--SHHHHHHHHTTS--SSCEEESS-SCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred HHHH-HHHhhccCC--CHHHHHHHHhcC--CCCEEeCC-CCCCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHH
Confidence 5999 999999985 899999999998 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhh
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
++|+.+++.+. .|+..+..+.+.+
T Consensus 330 ~~gv~v~~h~~-~e~~i~~aa~~hl 353 (441)
T 3vc5_A 330 TFGIELSMHSN-SHLGISLAAMTHL 353 (441)
T ss_dssp HTTCEEEECCC-SCCHHHHHHHHHH
T ss_pred HcCCEEEecCC-cccHHHHHHHHHH
Confidence 99999887654 6776665554333
No 92
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=99.73 E-value=2e-17 Score=155.38 Aligned_cols=163 Identities=17% Similarity=0.198 Sum_probs=135.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeee--------------h----hhhcccccCCcceeecCCCCCCCCCCccChh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMD--------------V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGD 88 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD--------------~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~ 88 (251)
..++++..+.+.+++ +.||+. |+ +|.+ + |.++.+.+ .+.|. .|+|+.+|.+
T Consensus 123 ~~~~e~~~~~a~~~~-~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~avG~---d~~L~-----vDaN~~~~~~ 192 (405)
T 3rr1_A 123 GDRPADVIAGMKALQ-AGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSAFGN---TVEFG-----LDFHGRVSAP 192 (405)
T ss_dssp CSSHHHHHHHHHHHH-HTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGG---GSEEE-----EECCSCBCHH
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHHhCC---CceEE-----EECCCCCCHH
Confidence 567899999999988 689996 88 6653 2 22333321 23332 2488999999
Q ss_pred hHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHH
Q 040341 89 GLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTE 168 (251)
Q Consensus 89 elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte 168 (251)
|.+.+.+. +++|+|.+||||+..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++||+|+
T Consensus 193 ~A~~~~~~-L~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~i~~~~~~~~~l~~~a~d~v~~d~~~~GGite 268 (405)
T 3rr1_A 193 MAKVLIKE-LEPYRPLFIEEPVLAEQAETYARLAAHT--HLPIAAGE-RMFSRFDFKRVLEAGGVSILQPDLSHAGGITE 268 (405)
T ss_dssp HHHHHHHH-HGGGCCSCEECSSCCSSTHHHHHHHTTC--SSCEEECT-TCCSHHHHHHHHHHCCCSEECCBTTTTTHHHH
T ss_pred HHHHHHHH-HHhcCCCEEECCCCcccHHHHHHHHhcC--CCCEEecC-CcCCHHHHHHHHHHhCCCeEEEChhhcCCHHH
Confidence 99887777 5999999999999999999999999998 89999999 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 169 SIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 169 ~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+++++.+|+++|+.+++++. ++.....+.+.++...
T Consensus 269 a~kia~lA~~~gi~v~~h~~--~s~i~~aa~~hlaaa~ 304 (405)
T 3rr1_A 269 CVKIAAMAEAYDVALAPHCP--LGPIALAACLHVDFVS 304 (405)
T ss_dssp HHHHHHHHHTTTCEECCBCC--SCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCEEEeCCC--CcHHHHHHHHHHHHhC
Confidence 99999999999999998854 5777776666665433
No 93
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=99.73 E-value=1.3e-17 Score=155.84 Aligned_cols=158 Identities=14% Similarity=0.184 Sum_probs=130.7
Q ss_pred cHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcC
Q 040341 31 SYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH 101 (251)
Q Consensus 31 ~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~y 101 (251)
+++..+.+.+++ +.||+. |+++|.|. |.++.+.+ .-...+ |+|+.+|.++.+.+.+. +++|
T Consensus 156 ~e~~~~~a~~~~-~~G~~~iKlK~g~~~~~d~~~v~avR~a~g~-~~~l~v-------DaN~~~~~~~A~~~~~~-L~~~ 225 (392)
T 3ddm_A 156 PENPEDVVARKA-AEGYRAFKLKVGFDDARDVRNALHVRELLGA-ATPLMA-------DANQGWDLPRARQMAQR-LGPA 225 (392)
T ss_dssp SSSHHHHHHHHH-HHTCCCEEEECSSCHHHHHHHHHHHHHHHCS-SSCEEE-------ECTTCCCHHHHHHHHHH-HGGG
T ss_pred HHHHHHHHHHHH-HcCCCEEEEecCCCHHHHHHHHHHHHHhcCC-CceEEE-------eCCCCCCHHHHHHHHHH-HHHh
Confidence 477888888877 689997 99988543 23333322 112333 48899999998887776 6999
Q ss_pred CceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 102 PIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 102 pI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
++.+||||+..+| ++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++||+|++++++.+|+++|
T Consensus 226 ~i~~iEeP~~~~d~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~g 302 (392)
T 3ddm_A 226 QLDWLEEPLRADRPAAEWAELAQAA--PMPLAGGE-NIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAG 302 (392)
T ss_dssp CCSEEECCSCTTSCHHHHHHHHHHC--SSCEEECT-TCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTT
T ss_pred CCCEEECCCCccchHHHHHHHHHhc--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcC
Confidence 9999999999999 99999999998 79999999 78999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCchhHhhhhhh
Q 040341 181 WGVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 181 ~~~ivs~rsgEt~d~~iadLAva 203 (251)
+.++ +|. .|+.....+.+.++
T Consensus 303 i~~~-~h~-~~~~i~~aa~~hl~ 323 (392)
T 3ddm_A 303 LRYC-PHY-LGAGIGLQASAHLL 323 (392)
T ss_dssp CEEC-CEE-CSCHHHHHHHHHHH
T ss_pred CEEE-ecC-CchHHHHHHHHHHH
Confidence 9986 554 57777666655554
No 94
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=99.73 E-value=1.6e-17 Score=156.40 Aligned_cols=159 Identities=20% Similarity=0.175 Sum_probs=133.2
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-----------eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHH
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-----------DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKN 92 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-----------D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid 92 (251)
.++++..+.+.+++ +.||+. ||++|- |+ |.++.+.+ .+.|. .|+|+.+|.++.+.
T Consensus 178 ~~~e~~~~~a~~~~-~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~---d~~L~-----vDaN~~~~~~~Ai~ 248 (412)
T 3stp_A 178 GSIEAMQKEAEEAM-KGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGY---DNDLM-----LECYMGWNLDYAKR 248 (412)
T ss_dssp CCHHHHHHHHHHHH-TTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCS---SSEEE-----EECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCC---CCeEE-----EECCCCCCHHHHHH
Confidence 47899999999987 699997 898864 23 22333321 23332 24889999999988
Q ss_pred HHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHH
Q 040341 93 VYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEA 172 (251)
Q Consensus 93 ~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~ 172 (251)
+.+. +++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|+++++
T Consensus 249 ~~~~-Le~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~ki 324 (412)
T 3stp_A 249 MLPK-LAPYEPRWLEEPVIADDVAGYAELNAMN--IVPISGGE-HEFSVIGCAELINRKAVSVLQYDTNRVGGITAAQKI 324 (412)
T ss_dssp HHHH-HGGGCCSEEECCSCTTCHHHHHHHHHTC--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHH
T ss_pred HHHH-HHhcCCCEEECCCCcccHHHHHHHHhCC--CCCEEeCC-CCCCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHH
Confidence 8777 5999999999999999999999999998 89999999 789999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 173 VKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 173 ~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
+.+|+++|+.+|+++ .-...+||+.|+.
T Consensus 325 a~~A~a~gi~v~~h~-----~~aa~~hlaaA~~ 352 (412)
T 3stp_A 325 NAIAEAAQIPVIPHA-----GQMHNYHLTMANT 352 (412)
T ss_dssp HHHHHHHTCCBCCSS-----CSHHHHHHHHTCT
T ss_pred HHHHHHcCCEEEecc-----HHHHHHHHHHhCC
Confidence 999999999999988 3455677775554
No 95
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=99.73 E-value=4.4e-17 Score=151.82 Aligned_cols=158 Identities=17% Similarity=0.204 Sum_probs=126.9
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeee-e----hhhhcccccCCc-ceeecCCCCCCCCCCccChhhHHHHHHHhhhc--
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGM-D----VAASEFYDSKDK-TYDLNFKEENNDGSQKVSGDGLKNVYRSFISD-- 100 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~Aase~~~~~~g-~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~-- 100 (251)
++++..+.+.+++ ++||+. ||++|- + ++.-+..++.-| .+.+. .|+|+.+|.+|.+++++. +++
T Consensus 145 ~~~~~~~~a~~~~-~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~-----vDan~~~~~~~a~~~~~~-l~~~g 217 (389)
T 2oz8_A 145 DDDAFVSLFSHAA-SIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVM-----IDPNEAWTSKEALTKLVA-IREAG 217 (389)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEE-----EECTTCBCHHHHHHHHHH-HHHTT
T ss_pred CHHHHHHHHHHHH-HhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEE-----EECCCCCCHHHHHHHHHH-HHhcC
Confidence 6788888888887 789996 898875 3 322222222111 23332 247899999999998887 688
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
|+|.+||||+.++||++|++|+++++ ++||++|| ++ ++.++++.++.++++.++|| ||+|++++++++|+++|
T Consensus 218 ~~i~~iEqP~~~~~~~~~~~l~~~~~-~iPIa~dE-~~-~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~g 290 (389)
T 2oz8_A 218 HDLLWVEDPILRHDHDGLRTLRHAVT-WTQINSGE-YL-DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELG 290 (389)
T ss_dssp CCCSEEESCBCTTCHHHHHHHHHHCC-SSEEEECT-TC-CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHT
T ss_pred CCceEEeCCCCCcCHHHHHHHHhhCC-CCCEEeCC-CC-CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999874 59999999 57 99999999999999999999 99999999999999999
Q ss_pred CcEEEecCCCCCCchhHhhhhhhcc
Q 040341 181 WGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 181 ~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
+.+|+++.+.| ..++|+.++.
T Consensus 291 i~~~~~~~~~e----a~lhlaaa~~ 311 (389)
T 2oz8_A 291 IPISIGNTFLE----AGVHMAVALP 311 (389)
T ss_dssp CCEEECCCGGG----TTHHHHHHST
T ss_pred CeEeecccHHH----HHHHHHhcCC
Confidence 99999964444 4466666554
No 96
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=99.73 E-value=1.4e-17 Score=155.64 Aligned_cols=157 Identities=20% Similarity=0.168 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHhcCCcc-ce-eee---eeh--------hhhcccccCCcceeecCCCCCCCCCCcc-ChhhHHHHHHHhh
Q 040341 33 EGFELLKTAIAKGGYIG-KI-VIG---MDV--------AASEFYDSKDKTYDLNFKEENNDGSQKV-SGDGLKNVYRSFI 98 (251)
Q Consensus 33 eal~~i~~Ai~~aGy~~-kI-~ig---lD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~-s~~elid~~~~l~ 98 (251)
+..+.+.+++ +.||+. || ++| .+. |.++.+.+ .+.+. .|+|+.+ |.+|.+.+.+. +
T Consensus 160 ~~~~~a~~~~-~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~---d~~l~-----vDaN~~~~~~~~A~~~~~~-L 229 (394)
T 3mkc_A 160 GYAPLLEKAK-AHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGH---DTDMM-----VDYLYRFTDWYEVARLLNS-I 229 (394)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCS---SSEEE-----EECTTCCCCHHHHHHHHHH-T
T ss_pred HHHHHHHHHH-HcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCC---CCeEE-----EeCCCCCCCHHHHHHHHHH-h
Confidence 4445666766 689997 99 888 333 22333322 23332 2478999 99999998877 5
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|+|.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|++
T Consensus 230 ~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~ 306 (394)
T 3mkc_A 230 EDLELYFAEATLQHDDLSGHAKLVENT--RSRICGAE-MSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATA 306 (394)
T ss_dssp GGGCCSEEESCSCTTCHHHHHHHHHHC--SSCBEECT-TCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHH
T ss_pred hhcCCeEEECCCCchhHHHHHHHHhhC--CCCEEeCC-CCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999998 79999999 789999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+|+.+++++. |+.....+.+.++.
T Consensus 307 ~gi~~~~h~~--~s~i~~aa~~hlaa 330 (394)
T 3mkc_A 307 NNVQVMPHNW--KTGITSAAAIHYQF 330 (394)
T ss_dssp TTCEECCCCC--SCHHHHHHHHHHHH
T ss_pred cCCEEeecCC--CcHHHHHHHHHHHH
Confidence 9999997653 88777766655554
No 97
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=99.73 E-value=1.6e-17 Score=157.34 Aligned_cols=163 Identities=12% Similarity=0.117 Sum_probs=136.3
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-----------------eh----hhhcccccCCcceeecCCCCCCCCCCccC
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-----------------DV----AASEFYDSKDKTYDLNFKEENNDGSQKVS 86 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-----------------D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s 86 (251)
.++++..+.+.+++ +.||+. |+++|- |+ |.++.+.+ .+.|. .|+|+.+|
T Consensus 145 ~~~e~~~~~a~~~~-~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~---d~~L~-----vDan~~~t 215 (433)
T 3rcy_A 145 TSADMAAESAADCV-ARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGD---KADLL-----FGTHGQFT 215 (433)
T ss_dssp TCHHHHHHHHHHHH-HTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTT---SSEEE-----ECCCSCBC
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCC---CCeEE-----EeCCCCCC
Confidence 68899999999988 689996 888753 12 22333321 23333 25889999
Q ss_pred hhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccH
Q 040341 87 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV 166 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtl 166 (251)
.++.+.+.+. +++|++.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++
T Consensus 216 ~~~A~~~~~~-Le~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~g~~D~v~~d~~~~GGi 291 (433)
T 3rcy_A 216 TAGAIRLGQA-IEPYSPLWYEEPVPPDNVGAMAQVARAV--RIPVATGE-RLTTKAEFAPVLREGAAAILQPALGRAGGI 291 (433)
T ss_dssp HHHHHHHHHH-HGGGCCSEEECCSCTTCHHHHHHHHHHS--SSCEEECT-TCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred HHHHHHHHHH-hhhcCCCEEECCCChhhHHHHHHHHhcc--CCCEEecC-CCCCHHHHHHHHHcCCCCEEEeCchhcCCH
Confidence 9999887777 6999999999999999999999999998 79999999 689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 167 TESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 167 te~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
|++++++.+|+++|+.+++++ .++.....+.+.++...
T Consensus 292 t~~~kia~lA~~~gv~~~~h~--~~s~i~~aa~lhlaaa~ 329 (433)
T 3rcy_A 292 WEMKKVAAMAEVYNAQMAPHL--YAGPVEWAANVHFAASI 329 (433)
T ss_dssp HHHHHHHHHHHTTTCEECCCC--SSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCEEEecC--CCCHHHHHHHHHHHHHh
Confidence 999999999999999998875 47777777777766543
No 98
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=99.73 E-value=2.7e-17 Score=156.29 Aligned_cols=158 Identities=13% Similarity=0.155 Sum_probs=131.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-e----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-D----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
+.++|+..+.+.+++++.||+. ||++|. + + |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 191 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~d--~~L~v-------DaN~~w~~~~Ai~~~~~- 260 (445)
T 3vdg_A 191 ALDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAFPD--HPLRL-------DPNAAWTPQTSVKVAAG- 260 (445)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHCTT--SCEEE-------ECTTCSCHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhCCC--CcEEE-------ECCCCCCHHHHHHHHHH-
Confidence 4678999999999886679997 999885 3 3 33444432 23444 48999999999998887
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++| +.+||||+. |++++++|++++ .+||++|| +++++.++++.++.++++.+++|++++|++||+++++.+|+
T Consensus 261 L~~~-l~~iEeP~~--~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~a~div~~d~~~~GGitea~kia~lA~ 334 (445)
T 3vdg_A 261 LEGV-LEYLEDPTP--GLDGMAEVAAQA--PMPLATNM-CVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICD 334 (445)
T ss_dssp TTTT-CSEEECCSS--SHHHHHHHHHHC--SSCEEESS-SCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred HhhH-HHeeeCCCC--CHHHHHHHHhcC--CCCEEcCC-cCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHHHHHHH
Confidence 5999 999999995 899999999998 79999999 78999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhh
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
++|+.+++.+ ..|+..+..+.+.+
T Consensus 335 ~~gv~v~~h~-~~e~~i~~aa~~hl 358 (445)
T 3vdg_A 335 TFGLGLSMHS-NSHLGISLAAMVHL 358 (445)
T ss_dssp HHTCEEEECC-CSCCHHHHHHHHHH
T ss_pred HcCCEEEEeC-CcchHHHHHHHHHH
Confidence 9999977655 46776665553333
No 99
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=99.73 E-value=2.6e-17 Score=156.46 Aligned_cols=158 Identities=15% Similarity=0.143 Sum_probs=131.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-e----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-D----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
+.++|+..+.+.+++++.||+. ||++|. + + |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 189 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~--~~L~v-------DaN~~w~~~~Ai~~~~~- 258 (445)
T 3va8_A 189 ALDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPG--VPLRL-------DPNAAWTVETSKWVAKE- 258 (445)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTT--CCEEE-------ECTTCBCHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCC--CcEee-------eCCCCCCHHHHHHHHHH-
Confidence 4688999999999886679997 999885 3 3 34444432 23444 48999999999988777
Q ss_pred hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++| +.+||||+. |++++++|++++ .+||+.|| +++++.++++.++.++++.+++|++++|++|++++++.+|+
T Consensus 259 L~~~-l~~iEeP~~--d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~ 332 (445)
T 3va8_A 259 LEGI-VEYLEDPAG--EIEGMAAVAKEA--SMPLATNM-AVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICA 332 (445)
T ss_dssp TTTT-CSEEESCBS--HHHHHHHHHTTC--SSCEEESS-SCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred Hhhh-cCeEeecCc--CHHHHHHHHHcC--CCCEEeCC-ccCCHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHH
Confidence 5999 999999984 899999999998 79999999 79999999999999999999999999999999999999999
Q ss_pred HcCCcEEEecCCCCCCchhHhhhhh
Q 040341 178 RAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
++|+.+++++ ..|+..+..+.+.+
T Consensus 333 ~~gv~v~~h~-~~e~~I~~aa~~hl 356 (445)
T 3va8_A 333 TWGLRLSMHS-NSHLGISLAAMTHL 356 (445)
T ss_dssp HHTCEEEECC-CSCCHHHHHHHHHH
T ss_pred HcCCEEEEeC-CcccHHHHHHHHHH
Confidence 9999977665 46776666654444
No 100
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=99.73 E-value=2.2e-17 Score=154.38 Aligned_cols=157 Identities=18% Similarity=0.219 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhcCCcc-ce-eee---eeh--------hhhcccccCCcceeecCCCCCCCCCCcc-ChhhHHHHHHHhh
Q 040341 33 EGFELLKTAIAKGGYIG-KI-VIG---MDV--------AASEFYDSKDKTYDLNFKEENNDGSQKV-SGDGLKNVYRSFI 98 (251)
Q Consensus 33 eal~~i~~Ai~~aGy~~-kI-~ig---lD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~-s~~elid~~~~l~ 98 (251)
+..+.+.+++ +.||+. || ++| .|. |.++.+.+ .+.+. .|+|+.+ |.++.+.+.+. +
T Consensus 155 ~~~~~a~~~~-~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~---d~~l~-----vDan~~~~~~~~A~~~~~~-L 224 (394)
T 3mqt_A 155 AYKPLIAKAK-ERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGW---DMDMM-----VDCLYRWTDWQKARWTFRQ-L 224 (394)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCS---SSEEE-----EECTTCCSCHHHHHHHHHH-T
T ss_pred HHHHHHHHHH-HcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCC---CCeEE-----EECCCCCCCHHHHHHHHHH-H
Confidence 4444666665 689996 99 888 333 22333322 23332 2478999 99999897777 6
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|++.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|++
T Consensus 225 ~~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~ 301 (394)
T 3mqt_A 225 EDIDLYFIEACLQHDDLIGHQKLAAAI--NTRLCGAE-MSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEH 301 (394)
T ss_dssp GGGCCSEEESCSCTTCHHHHHHHHHHS--SSEEEECT-TCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHH
T ss_pred hhcCCeEEECCCCcccHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999998 79999999 789999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+|+.+++++. |+.....+.+.++.
T Consensus 302 ~gi~~~~h~~--~s~i~~aa~~hlaa 325 (394)
T 3mqt_A 302 HNAQLMPHNW--KTGITAAAARHFGI 325 (394)
T ss_dssp HTCEECCCCC--SCHHHHHHHHHHHH
T ss_pred cCCEEeccCC--CchHHHHHHHHHHH
Confidence 9999997653 88777766666554
No 101
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=99.73 E-value=2.3e-17 Score=154.15 Aligned_cols=161 Identities=16% Similarity=0.225 Sum_probs=127.4
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeeeeh----------------hhhcccccCCcceeecCCCCCCCCCCccChhhHHH
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGMDV----------------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKN 92 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~iglD~----------------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid 92 (251)
++++..+.+.+...+.||+. |+++|.+. |.++.+.+ ...|. .|+|+.+|.++.+.
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v~avReavG~---d~~l~-----vDaN~~~~~~~A~~ 217 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEIIPTMRRELGD---DVDLL-----IDANSCYTPDRAIE 217 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHHHHHHHHHCS---SSEEE-----EECTTCCCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHHHHHHHHhCC---CCeEE-----EeCCCCcCHHHHHH
Confidence 34555555555555789997 99998653 22222321 12332 24899999999988
Q ss_pred HHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHH
Q 040341 93 VYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEA 172 (251)
Q Consensus 93 ~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~ 172 (251)
+.+. +++|++.+||||+..+|++++++|++++ .+||++|| +++++.++++.++.++++.+++|++++|++|+++++
T Consensus 218 ~~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~ki 293 (388)
T 3tcs_A 218 VGHM-LQDHGFCHFEEPCPYWELAQTKQVTDAL--DIDVTGGE-QDCDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRV 293 (388)
T ss_dssp HHHH-HHHTTCCEEECCSCTTCHHHHHHHHHHC--SSCEEECT-TCCCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHH
T ss_pred HHHH-HhhcCCeEEECCCCccCHHHHHHHHHhc--CCCEEcCC-ccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHH
Confidence 7777 5999999999999999999999999999 79999999 789999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEecCCCCCCchhHh--hhhhhc
Q 040341 173 VKMSKRAGWGVMASHRSGETEDTFIA--DLSVGL 204 (251)
Q Consensus 173 ~~~a~~~g~~~ivs~rsgEt~d~~ia--dLAva~ 204 (251)
+.+|+++|+.+++++. .+ ....++ ||+.++
T Consensus 294 a~~A~~~gv~~~~h~~-~~-~~~~~a~~hl~aa~ 325 (388)
T 3tcs_A 294 VEMARAAGLPVTPHCA-NW-SLVTLFTMHLLRAI 325 (388)
T ss_dssp HHHHHHTTCCBCCCCC-ST-TTHHHHHHHHHTTC
T ss_pred HHHHHHcCCEEEecCC-Cc-HHHHHHHHHHHHhC
Confidence 9999999999998764 33 344444 444443
No 102
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=99.71 E-value=1.7e-17 Score=156.80 Aligned_cols=163 Identities=12% Similarity=0.108 Sum_probs=129.4
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeeeeh-------------------------------------------hhhcccc
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGMDV-------------------------------------------AASEFYD 64 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~iglD~-------------------------------------------Aase~~~ 64 (251)
.+++++++.+.+++ +.||+. ||++|.+- |.++.+.
T Consensus 148 ~~~~~~~~~~~~~~-~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G 226 (426)
T 4e4f_A 148 HSIDEVLDDYAKHR-DQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFG 226 (426)
T ss_dssp SSHHHHHHHHHHHH-HTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhC
Confidence 46789999888887 689997 88887431 1111111
Q ss_pred cCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHH
Q 040341 65 SKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRV 144 (251)
Q Consensus 65 ~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i 144 (251)
+ .+.|. .|+|+.+|.++.+.+.+. +++|+|.+||||+..+|++++++|++++ .+||++|| +++++.++
T Consensus 227 ~---d~~L~-----vDaN~~~~~~~A~~~~~~-L~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~ 294 (426)
T 4e4f_A 227 F---NEHLL-----HDMHHRLTPIEAARFGKS-VEDYRLFWMEDPTPAENQACFRLIRQHT--VTPIAVGE-VFNSIWDC 294 (426)
T ss_dssp T---SSEEE-----EECTTCSCHHHHHHHHHH-TGGGCCSEEECCSCCSSGGGGHHHHTTC--CSCEEECT-TCCSGGGT
T ss_pred C---CCEEE-----EECCCCCCHHHHHHHHHH-HhhcCCCEEECCCChHHHHHHHHHHhcC--CCCEEeCC-CcCCHHHH
Confidence 1 22332 258899999999887776 6999999999999999999999999998 79999999 68899999
Q ss_pred HHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 145 EKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 145 ~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
++.++.++++.+++|++++|++|++++++++|+++|+.+++...+.++.....|-+.++.
T Consensus 295 ~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~~h~~~~~s~i~~aa~~hlaa 354 (426)
T 4e4f_A 295 KQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLSPICMAAALHFDL 354 (426)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeeeCCCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997654444567666655555443
No 103
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=99.71 E-value=9.9e-17 Score=152.22 Aligned_cols=148 Identities=20% Similarity=0.272 Sum_probs=124.2
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeeeeeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhc
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIGMDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD 100 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~iglD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ 100 (251)
++++..+.+.+++ +.||+. |+++|-++ |.++.+.+ .-...+ |+|+.+|.++.+.+.+. +++
T Consensus 201 ~~e~~~~~a~~~~-~~Gf~~~KlKvG~~~~~d~~~v~avR~a~G~-~~~l~v-------DaN~~~~~~~A~~~~~~-L~~ 270 (441)
T 4a35_A 201 SDDTLKQLCAQAL-KDGWTRFKVKVGADLQDDMRRCQIIRDMIGP-EKTLMM-------DANQRWDVPEAVEWMSK-LAK 270 (441)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEEECSSCHHHHHHHHHHHHHHHCT-TSEEEE-------ECTTCCCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCCCHHHHHHHHHHHHHHhCC-CCeEEE-------ECCCCCCHHHHHHHHHh-hcc
Confidence 6788899898888 679997 99988654 23333322 012333 48999999999998887 599
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
|++.+||||+..+|++++++|++++. ..+||++|| +++++.++++.++.++++.+++|++++|++|++++++.+|+++
T Consensus 271 ~~~~~iEeP~~~~d~~~~~~l~~~l~~~~iPIa~gE-~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~~kia~lA~~~ 349 (441)
T 4a35_A 271 FKPLWIEEPTSPDDILGHATISKALVPLGIGIATGE-QCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKF 349 (441)
T ss_dssp GCCSEEECCSCTTCHHHHHHHHHHHGGGTCEEEECT-TCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHHHHHHHHHHHT
T ss_pred cCccEEeCCCCcccHHHHHHHHHhccCCCCCEEeCC-ccccHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999832 179999999 6899999999999999999999999999999999999999999
Q ss_pred CCcEEEecCC
Q 040341 180 GWGVMASHRS 189 (251)
Q Consensus 180 g~~~ivs~rs 189 (251)
|+.++ .|.+
T Consensus 350 gv~v~-~H~~ 358 (441)
T 4a35_A 350 EIPVC-PHAG 358 (441)
T ss_dssp TCCBC-CCCC
T ss_pred CCEEE-EeCC
Confidence 99985 4643
No 104
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=99.70 E-value=1.2e-16 Score=149.98 Aligned_cols=161 Identities=11% Similarity=0.054 Sum_probs=132.0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcc-ceee-------------eee-----------------h----hhhcccccCCcce
Q 040341 26 PNIQESYEGFELLKTAIAKGGYIG-KIVI-------------GMD-----------------V----AASEFYDSKDKTY 70 (251)
Q Consensus 26 p~~~~~eeal~~i~~Ai~~aGy~~-kI~i-------------glD-----------------~----Aase~~~~~~g~Y 70 (251)
+...++++..+.+.+++ +.||+. ||++ |.+ + |.++.+.+ .+
T Consensus 139 ~~~~~~e~~~~~a~~~~-~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~---d~ 214 (409)
T 3go2_A 139 PPVTDLDGVKRTAEEAR-ERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGP---DV 214 (409)
T ss_dssp SCCCSHHHHHHHHHHHH-HTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCT---TS
T ss_pred cCCCCHHHHHHHHHHHH-HcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCC---CC
Confidence 45778999999999987 689996 8887 422 1 22222211 23
Q ss_pred eecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhc
Q 040341 71 DLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE 150 (251)
Q Consensus 71 ~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~ 150 (251)
.|. .|+|+.+|.+|.+.+.+. +++|+|.+||+|+ +|+++++.|++++ ++||++|| +++++.++++.++.
T Consensus 215 ~l~-----vDaN~~~~~~~A~~~~~~-L~~~~i~~iE~P~--~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~ 283 (409)
T 3go2_A 215 EIL-----LDLNFNAKPEGYLKILRE-LADFDLFWVEIDS--YSPQGLAYVRNHS--PHPISSCE-TLFGIREFKPFFDA 283 (409)
T ss_dssp EEE-----EECTTCSCHHHHHHHHHH-TTTSCCSEEECCC--SCHHHHHHHHHTC--SSCEEECT-TCCHHHHHHHHHHT
T ss_pred EEE-----EECCCCCCHHHHHHHHHH-HhhcCCeEEEeCc--CCHHHHHHHHhhC--CCCEEeCC-CcCCHHHHHHHHHh
Confidence 332 247899999999888777 5999999999998 4999999999998 79999999 78999999999999
Q ss_pred cCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 151 KTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 151 ~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
++++.+++|+++ |++|++++++.+|+++|+.+|+ |. .|+.....|.+.++.
T Consensus 284 ~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~-h~-~~s~i~~aa~~hlaa 334 (409)
T 3go2_A 284 NAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAP-HN-FYGHLCTMINANFAA 334 (409)
T ss_dssp TCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEE-CC-CSCHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEee-cC-CCcHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999998 54 688777766666554
No 105
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=99.70 E-value=1.3e-16 Score=149.98 Aligned_cols=166 Identities=10% Similarity=0.053 Sum_probs=133.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeeeehh--------hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGMDVA--------ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~iglD~A--------ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
.+++++..+.+.+.. +.||+. |++++.+.. .++.+.+ +-...+ |+|+.+|.++.+.+.+. +
T Consensus 186 ~~~~~~~~~~a~~~~-~~G~~~~K~k~g~~~~~~~~~v~~vR~~~g~-~~~l~v-------DaN~~~~~~~A~~~~~~-l 255 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQ-AKGFSSFKFASPVADDGVAKEMEILRERLGP-AVRIAC-------DMHWAHTASEAVALIKA-M 255 (412)
T ss_dssp CSSHHHHHHHHHHHH-HTTCCEEEEEGGGCTTCHHHHHHHHHHHHCS-SSEEEE-------ECCSCCCHHHHHHHHHH-H
T ss_pred CCcHHHHHHHHHHHH-hcCcceeccccccchhhHHHHHHHHHhccCC-eEEEEe-------ccccCCCHHHHHHHHHh-h
Confidence 356677777777655 789996 888775441 2222221 122333 48999999999898877 5
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|+|.+||||+..+|++++++|++++ +++|++|| ++.++.++++.++.++++.+++|+.+ |++|++++++.+|++
T Consensus 256 ~~~~l~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~div~~d~~~-GGit~~~kia~~A~~ 331 (412)
T 4h1z_A 256 EPHGLWFAEAPVRTEDIDGLARVAASV--STAIAVGE-EWRTVHDMVPRVARRALAIVQPEMGH-KGITQFMRIGAYAHV 331 (412)
T ss_dssp GGGCEEEEECCSCTTCHHHHHHHHHHC--SSEEEECT-TCCSHHHHHHHHHTTCCSEECCCHHH-HHHHHHHHHHHHHHH
T ss_pred cccccceecCCCCccchHHHHHHHhhc--CCccccCC-cccchHhHHHHHHcCCCCEEEecCCC-CChHHHHHHHHHHHH
Confidence 999999999999999999999999999 89999999 78999999999999999999999997 999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhcccCc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLATGQ 208 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~~~~ 208 (251)
+|+.+++++. .++.....|.+.++.....
T Consensus 332 ~gi~v~~h~~-~~~~i~~aa~lhl~aa~~~ 360 (412)
T 4h1z_A 332 HHIKVIPHAT-IGAGIFLAASLQASAALAN 360 (412)
T ss_dssp TTCEECCCCC-SSCSHHHHHHHHHHHHCTT
T ss_pred CCCcEEecCC-cchHHHHHHHHHHHHhCCC
Confidence 9999998775 5676666666655544433
No 106
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=99.70 E-value=6.7e-17 Score=151.90 Aligned_cols=155 Identities=14% Similarity=0.227 Sum_probs=124.6
Q ss_pred HHHHHHHHHHhcCCcc-ce--------eeee---------eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHH
Q 040341 34 GFELLKTAIAKGGYIG-KI--------VIGM---------DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLK 91 (251)
Q Consensus 34 al~~i~~Ai~~aGy~~-kI--------~igl---------D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~eli 91 (251)
+.+++++++ +.||+. |+ ++|. |+ |.++.+.+ .+.|. .|+|+.+|.+|.+
T Consensus 160 ~~~~a~~~~-~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~---d~~l~-----vDaN~~~~~~~A~ 230 (410)
T 3dip_A 160 AGVLAESLV-AEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQ---RIEIM-----CELHSLWGTHAAA 230 (410)
T ss_dssp HHHHHHHHH-HTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTT---SSEEE-----EECTTCBCHHHHH
T ss_pred HHHHHHHHH-HcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCC---CceEE-----EECCCCCCHHHHH
Confidence 345566666 689996 88 7653 22 22333332 23332 2488999999988
Q ss_pred HHHHHhhhcCCceeecCC-CCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHH
Q 040341 92 NVYRSFISDHPIVSIEDP-FDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 170 (251)
Q Consensus 92 d~~~~l~~~ypI~~IEDP-~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l 170 (251)
.+.+. +++|+|.+|||| +..+|+++++.|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|+++
T Consensus 231 ~~~~~-L~~~~i~~iEqP~~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 306 (410)
T 3dip_A 231 RICNA-LADYGVLWVEDPIAKMDNIPAVADLRRQT--RAPICGGE-NLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGR 306 (410)
T ss_dssp HHHHH-GGGGTCSEEECCBSCTTCHHHHHHHHHHH--CCCEEECT-TCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHH
T ss_pred HHHHH-HHhcCCCEEECCCCCcccHHHHHHHHhhC--CCCEEecC-CcCCHHHHHHHHHcCCCCeEeecccccCCHHHHH
Confidence 87776 699999999999 7999999999999999 89999999 6899999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 171 EAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+++.+|+++|+.+++++. +.....|.+.++.
T Consensus 307 ~ia~~A~~~gi~~~~h~~---s~i~~aa~~hlaa 337 (410)
T 3dip_A 307 KIAALAETHARPLAPHXT---GPVALMAGLHLAL 337 (410)
T ss_dssp HHHHHHHHTTCCEEECSS---CHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEeeeCc---cHHHHHHHHHHHH
Confidence 999999999999998775 5555555444443
No 107
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=99.69 E-value=3.6e-17 Score=149.98 Aligned_cols=150 Identities=13% Similarity=0.072 Sum_probs=122.5
Q ss_pred HHHHHhcCCcc-ceeeee-ehhh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeecCCCCc
Q 040341 39 KTAIAKGGYIG-KIVIGM-DVAA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 112 (251)
Q Consensus 39 ~~Ai~~aGy~~-kI~igl-D~Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e 112 (251)
.+++ +.||+. ||++|. |++- ++.+++ -...+ |+|+.+|.++. .+.+. +++|+|.+||||+..
T Consensus 135 ~~~~-~~G~~~~KiKvg~~d~~~v~avr~~~~~--~~l~v-------DaN~~~~~~~A-~~~~~-l~~~~i~~iEqP~~~ 202 (342)
T 2okt_A 135 ESLK-ATKPTRIKLKWTPQIMHQIRVLRELDFH--FQLVI-------DANESLDRQDF-TQLQL-LAREQVLYIEEPFKD 202 (342)
T ss_dssp HHHH-HHCCSEEEEECCTTHHHHHHHHTTSSSC--CEEEE-------ECTTCCCGGGH-HHHHH-HGGGCEEEEECCCSS
T ss_pred HHHH-HcCCcEEEEEeCHHHHHHHHHHHHhCCC--CeEEE-------ECCCCCCHHHH-HHHHH-HhhCCCcEEECCCCC
Confidence 5555 579996 888663 3322 222321 23344 48999999998 77776 699999999999999
Q ss_pred ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCC
Q 040341 113 DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGET 192 (251)
Q Consensus 113 ~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt 192 (251)
+|++++++ +++ .+||++|| ++.++.++++.++.++++.+++||.++||+|++++++++|+++|+.+|++++ .|+
T Consensus 203 ~d~~~~~~--~~~--~ipIa~dE-s~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es 276 (342)
T 2okt_A 203 ISMLDEVA--DGT--IPPIALDE-KATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGM-YEY 276 (342)
T ss_dssp GGGGGGSC--TTS--SCCEEEST-TCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBCS-SCC
T ss_pred ccHHHHHH--hcC--CCCEEecC-CCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcCC-ccc
Confidence 99999988 555 79999999 7899999999999999999999999999999999999999999999999986 578
Q ss_pred CchhHhhhhhhccc
Q 040341 193 EDTFIADLSVGLAT 206 (251)
Q Consensus 193 ~d~~iadLAva~~~ 206 (251)
.....+.+.++...
T Consensus 277 ~i~~aa~~hlaa~~ 290 (342)
T 2okt_A 277 GLSRYFTAMLARKG 290 (342)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhc
Confidence 77777666666543
No 108
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=99.69 E-value=6.8e-17 Score=151.35 Aligned_cols=155 Identities=12% Similarity=0.080 Sum_probs=124.4
Q ss_pred HHHHHHHHHhcCCcc-ceeeee------------------eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHH
Q 040341 35 FELLKTAIAKGGYIG-KIVIGM------------------DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLK 91 (251)
Q Consensus 35 l~~i~~Ai~~aGy~~-kI~igl------------------D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~eli 91 (251)
-+++++++ +.||+. ||+++. |+ |.++.+.+ .+.|. .|+|+.+|.+|.+
T Consensus 157 ~~~a~~~~-~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~g~---~~~l~-----vDaN~~~~~~~A~ 227 (400)
T 4dxk_A 157 DELAHSLL-EDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAVGD---KMDIM-----VEFHSMWQLLPAM 227 (400)
T ss_dssp HHHHHHHH-HTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHGG---GSEEE-----EECTTCBCHHHHH
T ss_pred HHHHHHHH-HhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHcCC---CceEE-----EECCCCCCHHHHH
Confidence 34555665 789996 888762 22 22333322 23332 2488999999988
Q ss_pred HHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHH
Q 040341 92 NVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIE 171 (251)
Q Consensus 92 d~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~ 171 (251)
.+.+. +++|++.+||||+..+|++++++|++++ ++||++|| +++++.++++.++.++++.+++|++++|++|++++
T Consensus 228 ~~~~~-L~~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~k 303 (400)
T 4dxk_A 228 QIAKA-LTPYQTFWHEDPIKMDSLSSLTRYAAVS--PAPISASE-TLGSRWAFRDLLETGAAGVVMLDISWCGGLSEARK 303 (400)
T ss_dssp HHHHH-TGGGCCSEEECCBCTTSGGGHHHHHHHC--SSCEEECT-TCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHH
T ss_pred HHHHH-HhhcCCCEEEcCCCcccHHHHHHHHHhC--CCCEEecC-CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 87776 6999999999999999999999999998 89999999 68999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 172 AVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 172 ~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
++.+|+++|+.+++++. + +.....+.+.++.
T Consensus 304 ia~~A~~~gi~~~~h~~-~-s~i~~aa~~hlaa 334 (400)
T 4dxk_A 304 IASMAEAWHLPVAPHXC-T-GPVVLCASTHLSL 334 (400)
T ss_dssp HHHHHHHTTCCEEEC-C-C-CHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEecCC-C-ChHHHHHHHHHHH
Confidence 99999999999998654 3 5555555555554
No 109
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=99.69 E-value=8.9e-17 Score=146.97 Aligned_cols=159 Identities=18% Similarity=0.247 Sum_probs=114.2
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcc-ceeeee-------ehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHH
Q 040341 27 NIQESYEGFELLKTAIAKGGYIG-KIVIGM-------DVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVY 94 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~-kI~igl-------D~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~ 94 (251)
.+.+++++.+.+. +.||+. ||++|. |++ .++.+.+ +-...+ |+|+.+|.++.+.+.
T Consensus 77 ~~~~~e~~~~~~~----~~G~~~~KiKvg~~g~~~~~d~~~v~avR~~~G~-~~~L~v-------DaN~~w~~~~A~~~~ 144 (327)
T 2opj_A 77 PAVGPEEAARIVA----SSGCTTAKVKVAERGQSEANDVARVEAVRDALGP-RGRVRI-------DVNGAWDVDTAVRMI 144 (327)
T ss_dssp CSCCHHHHHHHHH----HHCCSEEEEECCC------CHHHHHHHHHHHHCT-TSEEEE-------ECTTCSCHHHHHHHH
T ss_pred CCCCHHHHHHHHH----HCCCCEEEEEeCCCCCCHHHHHHHHHHHHHHhCC-CCEEEE-------ECCCCCCHHHHHHHH
Confidence 3456777655443 479996 888874 332 2233311 123344 489999999998987
Q ss_pred HHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 95 RSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 95 ~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+. +++|+|.+||||+. |+++++.|++++ .++|++|| ++.++.++.+.++.++++.++||++++||+|++++++
T Consensus 145 ~~-L~~~~l~~iEqP~~--~~~~~~~l~~~~--~iPIa~dE-s~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ia- 217 (327)
T 2opj_A 145 RL-LDRFELEYVEQPCA--TVDELAEVRRRV--SVPIAADE-SIRRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLA- 217 (327)
T ss_dssp HH-HGGGCEEEEECCSS--SHHHHHHHHHHC--SSCEEC------------CTTTTTCCSBEEECHHHHTSHHHHHHHH-
T ss_pred HH-HHhcCCcEEeCCCC--CHHHHHHHHhhC--CCCEEcCC-CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHH-
Confidence 77 58999999999997 689999999998 79999999 6889999999999999999999999999999999765
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
+.+|+.+|++++ .||.....+.+.++....
T Consensus 218 --~~~gi~~~~~~~-~es~ig~aa~~hlaaa~~ 247 (327)
T 2opj_A 218 --EECGLPVVVSSA-VETSVGLAAGVALAAALP 247 (327)
T ss_dssp --HHTCSCEEEBCC-SCCHHHHHHHHHHHHHSS
T ss_pred --HHcCCcEEEcCC-CcCHHHHHHHHHHHHhCC
Confidence 557999999987 688877766655555433
No 110
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=99.68 E-value=1.7e-16 Score=150.89 Aligned_cols=161 Identities=16% Similarity=0.189 Sum_probs=131.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-----eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-----DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++|+..+.+.+++++.||+. ||++|. |+ |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 180 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~pd--~~L~v-------DaN~~w~~~~A~~~~~~- 249 (450)
T 3mzn_A 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAFPE--ARLAL-------DPNGAWKLDEAVRVLEP- 249 (450)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHCTT--SEEEE-------ECTTCBCHHHHHHHHGG-
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhCCC--CeEEE-------ECCCCCCHHHHHHHHHH-
Confidence 4578999999999886679997 999885 33 23444432 23333 48999999999887776
Q ss_pred hhcCCceeecCCCCccc----HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDD----WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAV 173 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D----~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~ 173 (251)
++.| +.+||||+..+| ++++++|++++ .+||++|| ++++..++++.++.++++.+++|+ ++|++|++++++
T Consensus 250 L~~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~kia 324 (450)
T 3mzn_A 250 IKHL-LSYAEDPCGQEGGFSGRETMAEFKKRT--GLPTATNM-IATDYKQLQYAVQLNSVDIPLADC-HFWTMQGAVAVG 324 (450)
T ss_dssp GGGG-CSEEESSBCCBTTBCHHHHHHHHHHHH--CCCEEESS-SSSSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHHHHH
T ss_pred hhhc-cceeeCCCCcccccchHHHHHHHHHhc--CCCEEeCC-ccCCHHHHHHHHHcCCCCEEEecC-ccCCHHHHHHHH
Confidence 5899 999999999999 89999999999 79999999 789999999999999999999999 799999999999
Q ss_pred HHHHHcCCcEEEecCCCCCCchhHh--hhhhhc
Q 040341 174 KMSKRAGWGVMASHRSGETEDTFIA--DLSVGL 204 (251)
Q Consensus 174 ~~a~~~g~~~ivs~rsgEt~d~~ia--dLAva~ 204 (251)
.+|+++|+.++ .|...|+..+..+ ||+.++
T Consensus 325 ~lA~a~gv~~~-~h~~~~~~I~~aA~~hlaaa~ 356 (450)
T 3mzn_A 325 ELCNEWGMTWG-SHSNNHFDISLAMMTHVAAAC 356 (450)
T ss_dssp HHHHHTTCCCB-CCCCSCCHHHHHHHHHHHHTC
T ss_pred HHHHHcCCEEE-ecCCcccHHHHHHHHHHHHhC
Confidence 99999999964 5555666655544 444443
No 111
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=99.67 E-value=2.3e-16 Score=150.28 Aligned_cols=161 Identities=15% Similarity=0.186 Sum_probs=131.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-----eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-----DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++|+..+.+.+++++.||+. ||++|. |+ |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 183 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~pd--~~L~v-------DaN~~w~~~~A~~~~~~- 252 (455)
T 3pfr_A 183 AMDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPD--ARITL-------DPNGCWSLDEAIQLCKG- 252 (455)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTT--CCEEE-------ECTTBSCHHHHHHHHTT-
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEcCCCCCHHHHHHHHHHHHHhCCC--CeEee-------cCCCCCCHHHHHHHHHh-
Confidence 3578999999999886689997 999885 33 33444432 23344 48999999999887776
Q ss_pred hhcCCceeecCCCCccc----HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDD----WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAV 173 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D----~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~ 173 (251)
+++| +.+||||+..+| ++++++|++++ .+||++|| ++++..++++.++.++++.+++|+ ++|++|++++++
T Consensus 253 L~~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~kia 327 (455)
T 3pfr_A 253 LNDV-LTYAEDPCIGENGYSGREIMAEFRRRT--GIPTATNM-IATNWREMCHAIMLQSVDIPLADP-HFWTLTGASRVA 327 (455)
T ss_dssp CTTT-CSEEESCBCCBTTBCHHHHHHHHHHHH--CCCEEESS-SCCSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHHHHH
T ss_pred hccc-ceeeecCCChhhccchHHHHHHHHhcC--CCCEEeCC-CcCCHHHHHHHHHcCCCCEEEecC-CcCCHHHHHHHH
Confidence 5899 999999999999 89999999999 79999999 789999999999999999999999 799999999999
Q ss_pred HHHHHcCCcEEEecCCCCCCchhH--hhhhhhc
Q 040341 174 KMSKRAGWGVMASHRSGETEDTFI--ADLSVGL 204 (251)
Q Consensus 174 ~~a~~~g~~~ivs~rsgEt~d~~i--adLAva~ 204 (251)
.+|+++|+.++ .|...|+..+.. +||+.++
T Consensus 328 ~lA~a~gv~~~-~h~~~~~~i~~aa~~hlaaa~ 359 (455)
T 3pfr_A 328 QLCNEWGLTWG-CHSNNHFDISLAMFSHVGAAA 359 (455)
T ss_dssp HHHHHTTCCCB-CCCCSCCHHHHHHHHHHHHHC
T ss_pred HHHHHcCCEEE-ecCCcccHHHHHHHHHHHHhC
Confidence 99999999964 455566655443 4555444
No 112
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=99.67 E-value=2.7e-16 Score=150.36 Aligned_cols=161 Identities=14% Similarity=0.153 Sum_probs=131.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCcc-ceeeee-e----h----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 28 IQESYEGFELLKTAIAKGGYIG-KIVIGM-D----V----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~-kI~igl-D----~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
..++|+..+.+.+++++.||+. ||++|. + + |.++.+++ -...+ |+|+.+|.++.+.+.+.
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd--~~L~v-------DaN~~w~~~~Ai~~~~~- 267 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAAIKARFPH--ARVTL-------DPNGAWSLNEAIALCKG- 267 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHCTT--SEEEE-------ECTTBBCHHHHHHHHTT-
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHhCCC--CeEEe-------eCCCCCCHHHHHHHHHh-
Confidence 4578999999999886679997 999885 3 2 33444432 23333 48999999999887776
Q ss_pred hhcCCceeecCCCCccc----HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHH
Q 040341 98 ISDHPIVSIEDPFDQDD----WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAV 173 (251)
Q Consensus 98 ~~~ypI~~IEDP~~e~D----~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~ 173 (251)
++.| +.+||||+..+| +++++.|++++ .+||++|| +++++.++++.++.++++.+++|+ ++|++|++++++
T Consensus 268 Le~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~--~iPIa~dE-~~~~~~~~~~~l~~~a~div~~d~-~~GGit~a~kia 342 (470)
T 3p0w_A 268 QGHL-VAYAEDPCGPEAGYSGREVMAEFKRAT--GIPTATNM-IATDWRQMGHAVQLHAVDIPLADP-HFWTMQGSVRVA 342 (470)
T ss_dssp CTTT-CSEEESCBCCBTTBCHHHHHHHHHHHH--CCCEEESS-SSCSHHHHHHHHHTTCCSEEBCCH-HHHCHHHHHHHH
T ss_pred cccc-ceeecCCCChhhccchHHHHHHHHhcC--CCCEEeCC-ccCCHHHHHHHHHcCCCCEEEecC-ccCCHHHHHHHH
Confidence 5899 999999999999 89999999999 79999999 799999999999999999999999 799999999999
Q ss_pred HHHHHcCCcEEEecCCCCCCchhH--hhhhhhc
Q 040341 174 KMSKRAGWGVMASHRSGETEDTFI--ADLSVGL 204 (251)
Q Consensus 174 ~~a~~~g~~~ivs~rsgEt~d~~i--adLAva~ 204 (251)
.+|+++|+.++ .|...|+..+.. +||+.++
T Consensus 343 ~lA~a~gv~~~-~h~~~e~~I~~aA~~hlaaa~ 374 (470)
T 3p0w_A 343 QLCDEWGLTWG-SHSNNHFDVSLAMFTHVAAAA 374 (470)
T ss_dssp HHHHHHTCCCB-CCCCSCCHHHHHHHHHHHHTC
T ss_pred HHHHHcCCEEE-ecCCcccHHHHHHHHHHHHhC
Confidence 99999999965 454566655444 4555444
No 113
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=99.67 E-value=5e-16 Score=145.21 Aligned_cols=157 Identities=15% Similarity=0.085 Sum_probs=125.4
Q ss_pred cHHHHHHHHHHHHhcCCcc-ceeeeee-------------h----hhhcc-cccCCcceeecCCCCCCCCCCccChhhHH
Q 040341 31 SYEGFELLKTAIAKGGYIG-KIVIGMD-------------V----AASEF-YDSKDKTYDLNFKEENNDGSQKVSGDGLK 91 (251)
Q Consensus 31 ~eeal~~i~~Ai~~aGy~~-kI~iglD-------------~----Aase~-~~~~~g~Y~l~~~~~~~d~~~~~s~~eli 91 (251)
+++..+.+.+++ +.||+. |+++|-+ + |.++. .++ -...+ |+|+.+|.++.+
T Consensus 149 ~e~~~~~a~~~~-~~Gf~~~KlKvg~~~~~~~~~~~~~~d~~~v~avR~a~g~~--~~l~v-------DaN~~w~~~~A~ 218 (392)
T 3v5c_A 149 VALMQEEAMQGY-AKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPA--GKIMI-------DANNAYNLNLTK 218 (392)
T ss_dssp HHHHHHHHHHHH-HTTCCCEEEECCTTTTTSCHHHHHHHHHHHHHHHHHHHCTT--CCEEE-------ECTTCCCHHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECCCCCCccccccccHHHHHHHHHHHHHHcCCC--CcEEe-------eCCCCcCHHHHH
Confidence 466677777777 789997 9998852 2 23332 222 23344 489999999998
Q ss_pred HHHHHhhhcCCceeecCCCCcccHHHHHHHHhhh---CCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHH
Q 040341 92 NVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTE 168 (251)
Q Consensus 92 d~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~l---g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte 168 (251)
.+.+. +++|++.+||||+. +|+++++.|++++ +..++|+.|| +++ ..++++.++.++++.+++|+++ ||+||
T Consensus 219 ~~~~~-L~~~~l~~iEeP~~-~d~~~~~~l~~~~~~~~~~ipIa~gE-~~~-~~~~~~li~~~a~dii~~d~~~-GGite 293 (392)
T 3v5c_A 219 EVLAA-LSDVNLYWLEAAFH-EDEALYEDLKEWLGQRGQNVLIADGE-GLA-SPHLIEWATRGRVDVLQYDIIW-PGFTH 293 (392)
T ss_dssp HHHHH-TTTSCCCEEECSSS-CCHHHHHHHHHHHHHHTCCCEEEECC-SSC-CTTHHHHHHTTSCCEECCBTTT-BCHHH
T ss_pred HHHHh-cccCCCeEEeCCCC-cCHHHHHHHHHhhccCCCCCcEECCC-ccc-HHHHHHHHHcCCCcEEEeCCCC-CCHHH
Confidence 98887 59999999999999 6999999999863 2379999999 566 7788899999999999999999 99999
Q ss_pred HHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 169 SIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 169 ~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
+++++.+|+++|+.+++++. ++.....+.+.++.
T Consensus 294 a~kia~~A~~~gv~~~~h~~--~s~i~~aa~~hlaa 327 (392)
T 3v5c_A 294 WMELGEKLDAHGLRSAPHCY--GNAYGIYASGHLSA 327 (392)
T ss_dssp HHHHHHHHHHTTCEECCBCC--SCTHHHHHHHHHGG
T ss_pred HHHHHHHHHHcCCeEEecCC--CcHHHHHHHHHHHH
Confidence 99999999999999998764 67666666555554
No 114
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=99.65 E-value=8.2e-16 Score=142.69 Aligned_cols=161 Identities=16% Similarity=0.151 Sum_probs=128.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcc-ceeeee-----ehh----hhcccccCCcceeecCCCCCCCCCCccChhhHHHHHH
Q 040341 26 PNIQESYEGFELLKTAIAKGGYIG-KIVIGM-----DVA----ASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYR 95 (251)
Q Consensus 26 p~~~~~eeal~~i~~Ai~~aGy~~-kI~igl-----D~A----ase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~ 95 (251)
..+.++++..+.+.+++ +.||+. ||++|. |++ ..+.+...+-...+ |+|+.+|.++.+.+.+
T Consensus 146 ~~~~~~~~~~~~a~~~~-~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~g~~~~l~v-------DaN~~~~~~~A~~~~~ 217 (376)
T 4h2h_A 146 LGVMEPDEAARQALEKQ-REGYSRLQVKLGARPIEIDIEAIRKVWEAVRGTGIALAA-------DGNRGWTTRDALRFSR 217 (376)
T ss_dssp ECSCCHHHHHHHHHHHH-HHTCSEEEEECCSSCHHHHHHHHHHHHHHHTTSCCEEEE-------ECTTCCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHH-hcCceEEEEecCCCCHHHHHHHHHHHHhhccCCeeEEEE-------eeccCCCHHHHHHHHH
Confidence 34567899999999887 689997 999874 232 22222111112333 4899999999988777
Q ss_pred HhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHH
Q 040341 96 SFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 175 (251)
Q Consensus 96 ~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~ 175 (251)
. +++|++ +||||+. ++++++.|++.. +++|++|| ++.++.++.+.++.++++.+++|+.++|++|++++++++
T Consensus 218 ~-l~~~~~-~iEeP~~--~~~~~~~l~~~~--~~pia~dE-~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~ 290 (376)
T 4h2h_A 218 E-CPDIPF-VMEQPCN--SFEDLEAIRPLC--HHALYMDE-DGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDF 290 (376)
T ss_dssp H-CTTSCE-EEESCSS--SHHHHHHHGGGC--CSCEEEST-TCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHH
T ss_pred H-Hhhccc-cccCCcc--hhhhHhhhhhcc--cCccccCc-ccCCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHH
Confidence 6 589997 8999994 789999999998 79999999 799999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEecCCCCCCchhHhhhhh
Q 040341 176 SKRAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 176 a~~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
|+++|+++++++. .++.....+.+.+
T Consensus 291 a~~~gi~~~~~~~-~~~~i~~aa~~hl 316 (376)
T 4h2h_A 291 CAARNLPHTCDDA-WGGDIVSAACTHI 316 (376)
T ss_dssp HHHHTCCEECBCS-SCSHHHHHHHHHH
T ss_pred HHHcCCCEEeCCC-CccHHHHHHHHHH
Confidence 9999999999875 4555544444433
No 115
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=99.65 E-value=7.9e-16 Score=144.57 Aligned_cols=148 Identities=16% Similarity=0.150 Sum_probs=119.4
Q ss_pred HhcCCcc-ceeeee-----------eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceee
Q 040341 43 AKGGYIG-KIVIGM-----------DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 106 (251)
Q Consensus 43 ~~aGy~~-kI~igl-----------D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~I 106 (251)
.+.||+. |++++. |+ |.++.+.+ .-...+ |+|+.+|.++.+.+.+. +++|+|.+|
T Consensus 171 ~~~Gf~~~K~Kv~~g~~~g~~~~~~di~~v~avRea~G~-~~~L~v-------DaN~~w~~~~A~~~~~~-Le~~~l~~i 241 (404)
T 3ekg_A 171 QKMGFIGGKMPLHHGPSEGEEGLKKNLEELATMRERVGP-DFWLMF-------DCWMSLDLNYATRLARG-AREYGLKWI 241 (404)
T ss_dssp HHTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCS-SSEEEE-------ECTTCCCHHHHHHHHHH-HGGGTCCEE
T ss_pred HHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHHhCC-CCeEEe-------cCCCCCCHHHHHHHHHH-HhhcCCcEE
Confidence 3689996 888753 33 23333321 012333 48999999999998887 599999999
Q ss_pred cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEe
Q 040341 107 EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMAS 186 (251)
Q Consensus 107 EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs 186 (251)
|||+..+|++++++|+++++-.++|+.|| ++.++.++++.++.++++.+++|++++|++|++++++.+|+++|+.+++.
T Consensus 242 EeP~~~~d~~~~a~l~~~~~~pi~Ia~gE-~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h 320 (404)
T 3ekg_A 242 EEALPPDDYWGYAELRRNAPTGMMVTTGE-HEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVPH 320 (404)
T ss_dssp ECCSCTTCHHHHHHHHHHSCTTCEEEECT-TCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCC
T ss_pred ecCCCcccHHHHHHHHHhcCCCeEEEecC-ccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEec
Confidence 99999999999999999985445699999 68899999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCchhHhhhhhhcc
Q 040341 187 HRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 187 ~rsgEt~d~~iadLAva~~ 205 (251)
+. + ..-+||+.++.
T Consensus 321 ~~-~----~a~~hl~aa~p 334 (404)
T 3ekg_A 321 GS-S----VYSYHFVATRQ 334 (404)
T ss_dssp CC-T----HHHHHHHTTCT
T ss_pred Cc-H----HHHHHHHHhCC
Confidence 63 2 24566666554
No 116
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=99.64 E-value=1.5e-15 Score=141.72 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=124.2
Q ss_pred CcHHHHHHHHHHHHhcCCcc-ceeee-eeh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 30 ESYEGFELLKTAIAKGGYIG-KIVIG-MDV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~-kI~ig-lD~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
+.++..+.+.++. +.||+. |++++ .|. +.++.+.+ +-...+ |+|+.+|.++.+.+.+. ++
T Consensus 164 ~~~~~~~~~~~~~-~~G~~~~Kikvg~~~~~~d~~~v~avR~~~G~-~~~l~v-------DaN~~~~~~~A~~~~~~-l~ 233 (388)
T 4h83_A 164 PLGSIADEMHNYQ-ELGLAGVKFKVGGLSAAEDAARITAAREAAGD-DFIICI-------DANQGYKPAVAVDLSRR-IA 233 (388)
T ss_dssp TTCSHHHHHHHHH-HHTBSEEEEECSSSCHHHHHHHHHHHHHHHCS-SSEEEE-------ECTTCBCHHHHHHHHHH-TT
T ss_pred CHHHHHHHHHHHH-HcCCceEeecCCCCCHHHHHHHHHHHHHhcCC-CeEEEE-------ecCcCCCHHHHHHHHHH-hh
Confidence 4466777777766 789996 88883 444 22333322 122333 48999999999998887 59
Q ss_pred cCCceeecCCCCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 100 DHPIVSIEDPFDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 100 ~ypI~~IEDP~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
+|+|.+||||+.. +|+++++.|++++ +++|++|| ++.++.++++.++.++++.+++|+.++|++|++++++.+|+.
T Consensus 234 ~~~~~~iEeP~~~~~d~~~~~~l~~~~--~ipIa~dE-~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~ 310 (388)
T 4h83_A 234 DLNIRWFEEPVEWHNDKRSMRDVRYQG--SVPVCAGQ-TEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATS 310 (388)
T ss_dssp TSCCCCEESCBCSTTHHHHHHHHHHHS--SSCEEECT-TCSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHH
T ss_pred hcCcceeecCcccccchHHHHHHHhhc--CCCccCCc-cccChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHH
Confidence 9999999999974 7899999999999 89999999 799999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
+|+. |++. .++ ..-+|++.++.
T Consensus 311 ~gv~--v~~h-~~~--~~~~h~~aa~~ 332 (388)
T 4h83_A 311 YDVQ--MGHH-EEP--QVSTHLLASQP 332 (388)
T ss_dssp TTCE--ECCC-SCH--HHHHHHHHHST
T ss_pred CCCE--EEec-CHH--HHHHHHHHHhh
Confidence 9974 4443 233 23356665553
No 117
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=99.61 E-value=2.3e-15 Score=143.32 Aligned_cols=147 Identities=14% Similarity=0.150 Sum_probs=118.7
Q ss_pred HhcCCcc-ceeeee-----------eh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceee
Q 040341 43 AKGGYIG-KIVIGM-----------DV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 106 (251)
Q Consensus 43 ~~aGy~~-kI~igl-----------D~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~I 106 (251)
.+.||+. |++++. |+ |.++.+.+ .-...+ |+|+.+|.++.+.+.+. +++|+|.+|
T Consensus 177 ~~~Gf~~~KlKv~~~~~~G~~~~~~di~rv~avRea~G~-d~~L~v-------DaN~~wt~~~Ai~~~~~-Le~~~l~~i 247 (455)
T 3fxg_A 177 KAMGFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVGP-DFPIMV-------DCYMSLNVSYTIELVKA-CLDLNINWW 247 (455)
T ss_dssp HHHTCSCEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCS-SSCEEE-------ECTTCCCHHHHHHHHHH-TGGGCCSEE
T ss_pred HHcCCCEEEEcCCCCcccccccHHHHHHHHHHHHHHhCC-CCeEEE-------eCCCCCCHHHHHHHHHh-cccCCccee
Confidence 3679996 888753 33 23333321 022334 48999999999898777 599999999
Q ss_pred cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEe
Q 040341 107 EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMAS 186 (251)
Q Consensus 107 EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs 186 (251)
|||+..+|+++++.|++++. .++|+.|| ++.++.++++.++.++++.+++|++++|++|++++++.+|+++|+.+++.
T Consensus 248 EEPl~~dd~~~la~L~~~~~-~iPIA~gE-s~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~~H 325 (455)
T 3fxg_A 248 EECLSPDDTDGFALIKRAHP-TVKFTTGE-HEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVVPH 325 (455)
T ss_dssp ECCSCGGGGGGHHHHHHHCT-TSEEEECT-TCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBCCC
T ss_pred cCCCCcchHHHHHHHHHhCC-CCeEECCC-ccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 99999999999999999872 38999999 68899999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCchhHhhhhhhcc
Q 040341 187 HRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 187 ~rsgEt~d~~iadLAva~~ 205 (251)
+. + ..-+||+.++.
T Consensus 326 ~~-~----~aslHlaaa~p 339 (455)
T 3fxg_A 326 AS-G----PYSYHFQISQP 339 (455)
T ss_dssp SC-T----HHHHHHHTTCT
T ss_pred ch-H----HHHHHHHHhCC
Confidence 53 2 34466666554
No 118
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=99.57 E-value=4.6e-15 Score=135.17 Aligned_cols=164 Identities=18% Similarity=0.189 Sum_probs=124.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcc-ceeeee--ehhh----hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 26 PNIQESYEGFELLKTAIAKGGYIG-KIVIGM--DVAA----SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 26 p~~~~~eeal~~i~~Ai~~aGy~~-kI~igl--D~Aa----se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
....++++.. .++.+..||.. ||+++. |.+. ++..++ ....+ |+|+.+|.++.+.+.+. +
T Consensus 128 ~~~~~~~~~~---~~~~~~~~~~~~Kik~g~~~d~~~v~~vr~~g~d--~~l~v-------DaN~~w~~~~A~~~~~~-l 194 (329)
T 4gfi_A 128 ISLADPDTMA---AKTAENAGRPLLKIKTGTADDEARLRAVRAAAPE--ARIII-------DANEGWNDDNIEYYLKL-A 194 (329)
T ss_dssp ECCCCHHHHH---HHHHHTTTSSEEEEECCSSCCHHHHHHHHHHCTT--SEEEE-------ECTTCCCTTTHHHHHHH-H
T ss_pred ccCCChHHHH---HHHHhhccccEEEecCCcccHHHHHHHHHHhccC--CeEEE-------EcCCCCCHHHHHHHHHh-h
Confidence 3445555544 34455778875 677664 3322 222222 33444 48999999998887776 6
Q ss_pred hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++|+|.+||||+..+|+.++. +...+++|+.|| ++.++.++.+. .++++.+++||.++|++|++++++++|++
T Consensus 195 ~~~~i~~iEqP~~~~~~~~~~----~~~~~ipia~dE-s~~~~~d~~~~--~~a~d~i~~k~~~~GGit~~~~i~~~A~~ 267 (329)
T 4gfi_A 195 AELKISLIEQPLPAGKDAMLA----RIEHPVLICADE-SVHSTEDLAGL--RDRYDAINIKLDKTGGLTEALVMKAEAER 267 (329)
T ss_dssp HHTTCCEEECCSCTTSCGGGG----GSCCSSEEEEST-TCCTGGGSGGG--TTTCSEEEECHHHHTSHHHHHHHHHHHHH
T ss_pred hhcCceEEEecCCCccHHHHH----HhcCCCCchhcc-CCCCHHHHHHH--hhccCeEEecCceeCCHHHHHHHHHHHHH
Confidence 999999999999999987654 333478999999 78888887653 56899999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhcccCccc
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLATGQIK 210 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik 210 (251)
+|+++|++++ .||.....+-+.++....++-
T Consensus 268 ~gi~~~~~~~-~es~i~~aa~~~la~~~~~~d 298 (329)
T 4gfi_A 268 LGFTIMVGCM-LGTSLGMAPAVLVAQGTAFAD 298 (329)
T ss_dssp TTCEEEECCC-SCCHHHHHHHHHHTTTCSEEC
T ss_pred CCCEEEECCc-chhHHHHHHHHHHHhCCCeec
Confidence 9999999986 688888888888887776653
No 119
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=99.54 E-value=3.5e-14 Score=135.45 Aligned_cols=158 Identities=16% Similarity=0.147 Sum_probs=126.7
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeee-eh--------hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGM-DV--------AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~igl-D~--------Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
.++++.++...+++++.||+. |+++|. |. |.++.+.+ -...+ |+|+.+|.++.+.+.+. +
T Consensus 201 ~~~~~~~~~~~~~~~~~Gf~~~KlKvG~~~~~~di~~v~avrea~pd--~~L~v-------DaN~~wt~~~Ai~~~~~-l 270 (464)
T 4g8t_A 201 MTPESVVRLAEAAYEKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPD--ARITL-------DPNGAWSLDEAVKIGKQ-L 270 (464)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTT--CCEEE-------ECTTCBCHHHHHHHHHH-T
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHhhCCC--ceEEE-------ECCCccCHHHHHHHHHH-h
Confidence 357888899999898889997 999984 32 33444443 33444 48999999999987776 5
Q ss_pred hcCCceeecCCCCcccH----HHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHH
Q 040341 99 SDHPIVSIEDPFDQDDW----EHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVK 174 (251)
Q Consensus 99 ~~ypI~~IEDP~~e~D~----~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~ 174 (251)
+.| +.+||||+..+|+ +..++|.+++ .+||+.|| .++++.++++.++.++++.++.+ .++||+|++++++.
T Consensus 271 e~~-l~wiEeP~~~~d~~~~~e~~a~lr~~~--~iPIa~gE-~~~~~~~~~~~i~~~avdi~~~d-~~~GGit~~~kia~ 345 (464)
T 4g8t_A 271 KGV-LAYAEDPCGAEQGYSGREIMAEFRRAT--GLPTATNM-IATDWRQMGHTISLQSVDIPLAD-PHFWTMQGSIRVAQ 345 (464)
T ss_dssp TTT-CSCEESCBCCBTTBCHHHHHHHHHHHH--CCCEEESS-SSCSHHHHHHHHHHTCCSEEBCC-HHHHCHHHHHHHHH
T ss_pred hhc-cceeecCcCcccccchHHHHHhhhccC--CCCccccc-cccchhhHHHHHHhhCCCEEecc-ccccchHHHHHHHH
Confidence 888 8899999999986 6677888888 79999999 78999999999999999976666 58999999999999
Q ss_pred HHHHcCCcEEEecCCCCCCchhHhhhhh
Q 040341 175 MSKRAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 175 ~a~~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
+|+++|+.+++.+. .++..+..|.+.+
T Consensus 346 lA~~~gi~v~~h~~-~~~~I~laA~~hl 372 (464)
T 4g8t_A 346 MCHEWGLTWGSHSN-NHFDISLAMFTHV 372 (464)
T ss_dssp HHHHHTCCCBCCCC-SCCHHHHHHHHHH
T ss_pred HHHHcCCEEEEcCC-cccHHHHHHHHHH
Confidence 99999999988775 4565555544433
No 120
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=99.48 E-value=4.1e-14 Score=128.99 Aligned_cols=149 Identities=16% Similarity=0.101 Sum_probs=114.4
Q ss_pred CCcHHHHHHHHHHHHhcCCcc-ceeeeeeh----hhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhc---
Q 040341 29 QESYEGFELLKTAIAKGGYIG-KIVIGMDV----AASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD--- 100 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~-kI~iglD~----Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~--- 100 (251)
.++++.. +++ +.||+. ||++|.|+ +--+..++.+-...+ |+|+.+|.++.+.+.+. +++
T Consensus 111 ~~~~~~~----~~~-~~G~~~~KiKvg~~~~~d~~~v~avr~~~~~l~v-------DaN~~~~~~~A~~~~~~-l~~~~~ 177 (330)
T 3caw_A 111 LKPGFLD----GLK-NEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRL-------DFNALGSWQTFEKFMVN-LPLTVR 177 (330)
T ss_dssp CCTTHHH----HHH-HHTCCEEEEECSSCHHHHHHHHHHHHHTTCEEEE-------ECTTCSCHHHHHHHHHT-SCTTTG
T ss_pred CCHHHHH----HHH-HcCCcEEEEecCCCHHHHHHHHHHHhCCCCeEEE-------ECCCCCCHHHHHHHHHH-hhhhcc
Confidence 4555544 555 569996 99988654 211111111123444 48999999999998887 477
Q ss_pred CCceeecCCCCcc-cHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 101 HPIVSIEDPFDQD-DWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 101 ypI~~IEDP~~e~-D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
|+|.+||||+..+ |++++ |+ + . +||+.||. ++.++++.++.++++.+++|+.++ ++| +++++|+++
T Consensus 178 ~~l~~iEqP~~~~~d~~~~--l~-~--~-iPIa~dEs---~~~~~~~~i~~~a~d~v~~k~~~~-Gi~---~i~~~A~~~ 244 (330)
T 3caw_A 178 PLIEYVEDPFPFDFHAWGE--AR-K--L-AKIALDNQ---YDKVPWGKIASAPFDVIVIKPAKT-DVD---KAVAQCQKW 244 (330)
T ss_dssp GGEEEEECCSSCCHHHHHH--HT-T--T-SCEEESTT---GGGCCTTTCSSCSCSEEEECTTTS-CHH---HHHHHHHHT
T ss_pred CCceEEECCCCCCccHHHH--HH-h--c-CcEEeCCC---CHHHHHHHHHcCCCCEEEechhhc-cHH---HHHHHHHHc
Confidence 9999999999999 99999 65 4 3 99999994 788888999999999999999999 999 999999999
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhc
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
|+.+|++++ .||.....+.+.++.
T Consensus 245 gi~~~~~~~-~es~ig~aa~~hlaa 268 (330)
T 3caw_A 245 NLKLAVTSY-MDHPVGVVHAVGVAM 268 (330)
T ss_dssp TCEEEEBCC-SCCHHHHHHHHHHHH
T ss_pred CCcEEEeCc-cCcHHHHHHHHHHHc
Confidence 999999975 678766654444443
No 121
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.06 E-value=0.088 Score=46.16 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=95.3
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceee
Q 040341 27 NIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 106 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~I 106 (251)
...+.+.|++++..+- ++|..- |+.+ .|+..+..|. |++ .- .+-...+.+++++++|-.+
T Consensus 32 ~~~~~e~a~~~a~~l~-~~Ga~~-vk~~-------~fkprts~~~--~~g--------~~-~egl~~l~~~~~~~Gl~~~ 91 (262)
T 1zco_A 32 SIESREQIMKVAEFLA-EVGIKV-LRGG-------AFKPRTSPYS--FQG--------YG-EKALRWMREAADEYGLVTV 91 (262)
T ss_dssp BCCCHHHHHHHHHHHH-HTTCCE-EECB-------SSCCCSSTTS--CCC--------CT-HHHHHHHHHHHHHHTCEEE
T ss_pred CCCCHHHHHHHHHHHH-HcCCCE-EEEE-------ecccCCCccc--ccC--------cc-HHHHHHHHHHHHHcCCcEE
Confidence 4678899999888865 677531 1111 1222112232 211 11 4556778888899999999
Q ss_pred cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC-cEEE
Q 040341 107 EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW-GVMA 185 (251)
Q Consensus 107 EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~-~~iv 185 (251)
=+||+..+.+-..++ + .+.-+|-- .++|...++...+ ....|+||-++.+|+.|.+++++.++..|- .+++
T Consensus 92 te~~d~~~~~~l~~~---v--d~~kIga~-~~~n~~ll~~~a~--~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L 163 (262)
T 1zco_A 92 TEVMDTRHVELVAKY---S--DILQIGAR-NSQNFELLKEVGK--VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVIL 163 (262)
T ss_dssp EECCCGGGHHHHHHH---C--SEEEECGG-GTTCHHHHHHHTT--SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred EeeCCHHhHHHHHhh---C--CEEEECcc-cccCHHHHHHHHh--cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 999999997766665 3 34444554 5789888888766 577899999999999999999999999886 7888
Q ss_pred ecC
Q 040341 186 SHR 188 (251)
Q Consensus 186 s~r 188 (251)
-||
T Consensus 164 ~~R 166 (262)
T 1zco_A 164 CER 166 (262)
T ss_dssp EEC
T ss_pred EEC
Confidence 886
No 122
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.01 E-value=0.096 Score=47.95 Aligned_cols=132 Identities=14% Similarity=0.156 Sum_probs=94.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeec
Q 040341 28 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE 107 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IE 107 (251)
+.+.+.+++++..+- ++|-+- +++ .+|+..+..|. |++ +. ++....+++.+++++|..+=
T Consensus 116 ~es~e~a~~~a~~~k-~aGa~~-vr~-------q~fKprTs~~~--f~g--------lg-~egl~~l~~~~~e~Gl~~~t 175 (350)
T 1vr6_A 116 VEGREMLMETAHFLS-ELGVKV-LRG-------GAYKPRTSPYS--FQG--------LG-EKGLEYLREAADKYGMYVVT 175 (350)
T ss_dssp CCCHHHHHHHHHHHH-HTTCCE-EEC-------BSCCCCCSTTS--CCC--------CT-HHHHHHHHHHHHHHTCEEEE
T ss_pred cCCHHHHHHHHHHHH-HcCCCe-eee-------eEEeCCCChHh--hcC--------CC-HHHHHHHHHHHHHcCCcEEE
Confidence 678889999888855 677541 111 12222222232 221 12 45568888889999999999
Q ss_pred CCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC-cEEEe
Q 040341 108 DPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW-GVMAS 186 (251)
Q Consensus 108 DP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~-~~ivs 186 (251)
+||+..+.+-..++ + .+.-+|-- .++|...++.+.. ....|+||-++.+|+.|...+++.+++.|- .+++.
T Consensus 176 e~~d~~~~~~l~~~---v--d~lkIgAr-~~~n~~LL~~va~--~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 176 EALGEDDLPKVAEY---A--DIIQIGAR-NAQNFRLLSKAGS--YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp ECSSGGGHHHHHHH---C--SEEEECGG-GTTCHHHHHHHHT--TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EeCCHHHHHHHHHh---C--CEEEECcc-cccCHHHHHHHHc--cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 99999998877766 3 34445554 5789998888764 568999999999999999999999999886 77776
Q ss_pred c
Q 040341 187 H 187 (251)
Q Consensus 187 ~ 187 (251)
+
T Consensus 248 e 248 (350)
T 1vr6_A 248 E 248 (350)
T ss_dssp E
T ss_pred e
Confidence 3
No 123
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.89 E-value=0.11 Score=46.06 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=96.3
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceee
Q 040341 27 NIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 106 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~I 106 (251)
.+.+.+.+++++..+- ++|-+- +++ .+|+..+..|. |++ .. ++-...+.+.+++++|..+
T Consensus 47 ~~~~~e~a~~~a~~~k-~~ga~~-~k~-------~~~kprts~~~--f~g--------~g-~~gl~~l~~~~~~~Gl~~~ 106 (276)
T 1vs1_A 47 SVESWEQVREAALAVK-EAGAHM-LRG-------GAFKPRTSPYS--FQG--------LG-LEGLKLLRRAGDEAGLPVV 106 (276)
T ss_dssp BCCCHHHHHHHHHHHH-HHTCSE-EEC-------BSSCCCSSTTS--CCC--------CT-HHHHHHHHHHHHHHTCCEE
T ss_pred CCCCHHHHHHHHHHHH-HhCCCE-EEe-------EEEeCCCChhh--hcC--------CC-HHHHHHHHHHHHHcCCcEE
Confidence 4678899999888855 677541 111 12222222222 221 11 4556888888999999999
Q ss_pred cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC-cEEE
Q 040341 107 EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW-GVMA 185 (251)
Q Consensus 107 EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~-~~iv 185 (251)
=+||+..+.+-..++ + .+.-+|-- .++|...++.+.. ....|+||-++.+|+.|...+++.++..|- .+++
T Consensus 107 te~~d~~~~~~l~~~---v--d~~kIgs~-~~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L 178 (276)
T 1vs1_A 107 TEVLDPRHVETVSRY---A--DMLQIGAR-NMQNFPLLREVGR--SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVL 178 (276)
T ss_dssp EECCCGGGHHHHHHH---C--SEEEECGG-GTTCHHHHHHHHH--HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred EecCCHHHHHHHHHh---C--CeEEECcc-cccCHHHHHHHHc--cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 999999998877766 3 34455554 5789998888764 467899999999999999999999999986 7888
Q ss_pred ecCC
Q 040341 186 SHRS 189 (251)
Q Consensus 186 s~rs 189 (251)
-||-
T Consensus 179 ~~Rg 182 (276)
T 1vs1_A 179 VERG 182 (276)
T ss_dssp EECC
T ss_pred EeCC
Confidence 7753
No 124
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.21 E-value=0.14 Score=47.45 Aligned_cols=133 Identities=17% Similarity=0.201 Sum_probs=93.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeec
Q 040341 28 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE 107 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IE 107 (251)
+.+.+.+++++..+- ++|..- |+++ .|+..+..|.+ +.+..+. ...+.+.+++++|..+-
T Consensus 152 ves~e~a~~~a~~~k-~aGa~~-vk~q-------~fkprts~~~f----------~gl~~eg-l~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 152 VESYEQVAAVAESIK-AKGLKL-IRGG-------AFKPRTSPYDF----------QGLGLEG-LKILKRVSDEYGLGVIS 211 (385)
T ss_dssp CCCHHHHHHHHHHHH-HTTCCE-EECB-------SSCCCSSTTSC----------CCCTHHH-HHHHHHHHHHHTCEEEE
T ss_pred cCCHHHHHHHHHHHH-HcCCCe-EEcc-------cccCCCChHhh----------cCCCHHH-HHHHHHHHHHcCCEEEE
Confidence 458888999888865 687541 2211 12222222321 1233444 57788888999999999
Q ss_pred CCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCC-cEEEe
Q 040341 108 DPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGW-GVMAS 186 (251)
Q Consensus 108 DP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~-~~ivs 186 (251)
+||+..+.+-..++ + .+.=+|-- .++|...++.+.. ....|+||-++.+|+.|...+++.+++.|- .+++-
T Consensus 212 e~~d~~~~~~l~~~---v--d~lkIgs~-~~~n~~LL~~~a~--~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 212 EIVTPADIEVALDY---V--DVIQIGAR-NMQNFELLKAAGR--VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp ECCSGGGHHHHTTT---C--SEEEECGG-GTTCHHHHHHHHT--SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred ecCCHHHHHHHHhh---C--CEEEECcc-cccCHHHHHHHHc--cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 99999987766543 3 34444444 4789888887665 466899999999999999999999999886 68888
Q ss_pred cC
Q 040341 187 HR 188 (251)
Q Consensus 187 ~r 188 (251)
||
T Consensus 284 ~r 285 (385)
T 3nvt_A 284 ER 285 (385)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 125
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=95.15 E-value=0.37 Score=42.90 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=75.1
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHH
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 167 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlt 167 (251)
++-.+.+.+++++++|-.+=+||+..+.+-..+ .+ .+.-+|-- .++|.+.++.+. +....|+||-++.+|+.
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~---~v--d~~kIgA~-~~~n~~Ll~~~a--~~~kPV~lk~G~~~t~~ 146 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD---VV--DIIQLPAF-LARQTDLVEAMA--KTGAVINVKKPQFLSPS 146 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT---TC--SEEEECGG-GTTCHHHHHHHH--HTTCEEEEECCTTSCGG
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh---cC--CEEEECcc-cccCHHHHHHHH--cCCCcEEEeCCCCCCHH
Confidence 555678888889999999999999988766654 23 44455554 478888777765 46889999999999999
Q ss_pred HHHHHHHHHHHcCC-cEEEecCC
Q 040341 168 ESIEAVKMSKRAGW-GVMASHRS 189 (251)
Q Consensus 168 e~l~~~~~a~~~g~-~~ivs~rs 189 (251)
|.+.+++.++..|- .+++-+|-
T Consensus 147 ei~~Av~~i~~~Gn~~i~L~~rg 169 (292)
T 1o60_A 147 QMGNIVEKIEECGNDKIILCDRG 169 (292)
T ss_dssp GHHHHHHHHHHTTCCCEEEEECC
T ss_pred HHHHHHHHHHHcCCCeEEEEECC
Confidence 99999999999885 78888873
No 126
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=94.74 E-value=0.63 Score=41.11 Aligned_cols=95 Identities=19% Similarity=0.153 Sum_probs=75.4
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHH
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 167 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlt 167 (251)
++-.+.+.+++++++|-.+=+||+..+.+-..++ + .+.=+|-- .++|.+.++.+. +....|+||-++.+|+.
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---~--d~~kIga~-~~~n~~ll~~~a--~~~kPV~lk~G~~~t~~ 143 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV---C--DVIQLPAF-LARQTDLVVAMA--KTGNVVNIKKPQFLSPS 143 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---C--SEEEECGG-GTTBHHHHHHHH--HTCCEEEEECCTTSCGG
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh---C--CEEEECcc-cccCHHHHHHHH--cCCCcEEEECCCCCCHH
Confidence 5556888888899999999999999998877766 2 33334443 468888777764 46889999999999999
Q ss_pred HHHHHHHHHHHcCC-cEEEecCCC
Q 040341 168 ESIEAVKMSKRAGW-GVMASHRSG 190 (251)
Q Consensus 168 e~l~~~~~a~~~g~-~~ivs~rsg 190 (251)
|.+.+++.++..|- .+++-||-+
T Consensus 144 e~~~A~~~i~~~Gn~~i~L~~rg~ 167 (280)
T 2qkf_A 144 QMKNIVEKFHEAGNGKLILCERGS 167 (280)
T ss_dssp GHHHHHHHHHHTTCCCEEEEECCE
T ss_pred HHHHHHHHHHHcCCCeEEEEECCC
Confidence 99999999999885 788888753
No 127
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.62 E-value=0.15 Score=44.86 Aligned_cols=127 Identities=17% Similarity=0.119 Sum_probs=82.5
Q ss_pred CccChhhHHHHHHHhhhcCCceeecCCC---------CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCc
Q 040341 83 QKVSGDGLKNVYRSFISDHPIVSIEDPF---------DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTC 153 (251)
Q Consensus 83 ~~~s~~elid~~~~l~~~ypI~~IEDP~---------~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~ 153 (251)
..++.++.+.++..| ++.++-.||-.+ -+++|+-.+.+.+.- .++++. .+.|.+.++++++.+..
T Consensus 21 ~~~~~e~k~~i~~~L-~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~--~~~v~~---l~~n~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 21 RFVPTADKIALINRL-SDCGYARIEATSFVSPKWVPQLADSREVMAGIRRAD--GVRYSV---LVPNMKGYEAAAAAHAD 94 (295)
T ss_dssp SCCCHHHHHHHHHHH-TTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCS--SSEEEE---ECSSHHHHHHHHHTTCS
T ss_pred CCcCHHHHHHHHHHH-HHcCcCEEEEccCcCccccccccCHHHHHHHHHhCC--CCEEEE---EeCCHHHHHHHHHCCCC
Confidence 458999999988884 888887888744 136777767665442 455542 23789999999987654
Q ss_pred ceeEee--cc-----------ccccHHHHHHHHHHHHHcCCcEE--EecC-----CCCCCchhHhhhhh---hcccCccc
Q 040341 154 NALLLK--VN-----------QIGSVTESIEAVKMSKRAGWGVM--ASHR-----SGETEDTFIADLSV---GLATGQIK 210 (251)
Q Consensus 154 n~ilIK--~n-----------qiGtlte~l~~~~~a~~~g~~~i--vs~r-----sgEt~d~~iadLAv---a~~~~~ik 210 (251)
.|.|- .+ .-..+..+.+++++|++.|+.+. |+.- .+.++..++.+++- .+++..+.
T Consensus 95 -~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 95 -EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp -EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred -EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 33332 22 22355666677899999999987 5543 13455566555554 77777776
Q ss_pred cCCCCc
Q 040341 211 TGAPCR 216 (251)
Q Consensus 211 ~G~~~r 216 (251)
..+..+
T Consensus 174 l~Dt~G 179 (295)
T 1ydn_A 174 LGDTIG 179 (295)
T ss_dssp EEETTS
T ss_pred ecCCCC
Confidence 554433
No 128
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.52 E-value=0.43 Score=43.63 Aligned_cols=143 Identities=13% Similarity=0.138 Sum_probs=92.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCccceeeeeehhhhccc-ccCCcceeecCCCCCCC-------CCCccChhhHHHHHHHhhh
Q 040341 28 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFY-DSKDKTYDLNFKEENND-------GSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~-~~~~g~Y~l~~~~~~~d-------~~~~~s~~elid~~~~l~~ 99 (251)
..+.|.|++++..|- ++|-.- |+++.=-+ ..++ ++. +.|... +.+ ....++.++ ...+.+.++
T Consensus 31 ~gs~e~a~~li~~ak-~aGada-vKfq~~k~-~tl~s~~~-~~fq~~----~~~~~~y~~~~~~~l~~e~-~~~L~~~~~ 101 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAY-NAGAEV-VKHQTHIV-EDEMSDEA-KQVIPG----NADVSIYEIMERCALNEED-EIKLKEYVE 101 (349)
T ss_dssp TTCHHHHHHHHHHHH-HHTCSE-EEEEECCH-HHHCCGGG-GGCCCT----TCSSCHHHHHHHHCCCHHH-HHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH-HhCCCE-Eeeeeccc-ccccCcch-hccccC----CCCccHHHHHHHhCCCHHH-HHHHHHHHH
Confidence 568899999998876 788752 33321111 1111 000 112111 000 001345555 466778899
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+++|.++-.||+.++.+-..++. + +-.+|-.- .++|...|+...+ ....|+||-+.. |+.|...+++..++.
T Consensus 102 ~~Gi~~~st~~d~~svd~l~~~~--v-~~~KI~S~--~~~n~~LL~~va~--~gkPviLstGma-t~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 102 SKGMIFISTLFSRAAALRLQRMD--I-PAYKIGSG--ECNNYPLIKLVAS--FGKPIILSTGMN-SIESIKKSVEIIREA 173 (349)
T ss_dssp HTTCEEEEEECSHHHHHHHHHHT--C-SCEEECGG--GTTCHHHHHHHHT--TCSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HhCCeEEEeeCCHHHHHHHHhcC--C-CEEEECcc--cccCHHHHHHHHh--cCCeEEEECCCC-CHHHHHHHHHHHHHc
Confidence 99999999999988876665441 2 22444444 4799999998765 467899999874 999999999999998
Q ss_pred CCcEEEec
Q 040341 180 GWGVMASH 187 (251)
Q Consensus 180 g~~~ivs~ 187 (251)
|-.+++-|
T Consensus 174 G~~iiLlh 181 (349)
T 2wqp_A 174 GVPYALLH 181 (349)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEe
Confidence 87777754
No 129
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=94.20 E-value=0.19 Score=46.04 Aligned_cols=132 Identities=19% Similarity=0.219 Sum_probs=92.1
Q ss_pred cChhhHHHHHHHhhhcCC--ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 85 VSGDGLKNVYRSFISDHP--IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 85 ~s~~elid~~~~l~~~yp--I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
.+.+..++...+|. +-+ |+=+==|- +++.+....+.+++ .+|||+|-- .|++.+..+++.+ +..+=|-|+.
T Consensus 43 ~D~~atv~Qi~~l~-~aG~diVRvavp~-~~~a~al~~I~~~~--~vPlvaDiH--f~~~lal~a~e~G-~dklRINPGN 115 (366)
T 3noy_A 43 HDVEATLNQIKRLY-EAGCEIVRVAVPH-KEDVEALEEIVKKS--PMPVIADIH--FAPSYAFLSMEKG-VHGIRINPGN 115 (366)
T ss_dssp TCHHHHHHHHHHHH-HTTCCEEEEECCS-HHHHHHHHHHHHHC--SSCEEEECC--SCHHHHHHHHHTT-CSEEEECHHH
T ss_pred cCHHHHHHHHHHHH-HcCCCEEEeCCCC-hHHHHHHHHHHhcC--CCCEEEeCC--CCHHHHHHHHHhC-CCeEEECCcc
Confidence 45556666666653 334 66554453 56788999999998 899999942 4899998888765 4458899999
Q ss_pred cccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhC
Q 040341 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG 234 (251)
Q Consensus 163 iGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~ 234 (251)
+|.-...-++++.|+++|.++.||-.+|--+..++.- -|.+..-..+.---+.+++-|+++
T Consensus 116 ig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~-----------yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 116 IGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEK-----------YGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp HSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHH-----------HSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHhCC
Confidence 9998888899999999999999998776554443332 233333334444445555555554
No 130
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.95 E-value=0.59 Score=43.25 Aligned_cols=141 Identities=10% Similarity=0.144 Sum_probs=91.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcc-------ccc----CCcceeecCCCCCCCCCCccChhhHHHHHHH
Q 040341 28 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF-------YDS----KDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 96 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~-------~~~----~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~ 96 (251)
-.+.|.|++++..|- ++|-.- |+++.=-+ .++ |.. .+..|++ ++ ...++.++ ...+.+
T Consensus 40 ~Gsle~A~~li~~Ak-~aGAda-vKfQ~~k~-~tl~s~~~~~fq~~~~~~~~~ye~-~~------~~~l~~e~-~~~L~~ 108 (385)
T 1vli_A 40 DGKLDQAFALIDAAA-EAGADA-VKFQMFQA-DRMYQKDPGLYKTAAGKDVSIFSL-VQ------SMEMPAEW-ILPLLD 108 (385)
T ss_dssp TTCHHHHHHHHHHHH-HHTCSE-EEECCBCG-GGGTSCCC---------CCCHHHH-GG------GBSSCGGG-HHHHHH
T ss_pred cccHHHHHHHHHHHH-HhCCCE-Eeeeeecc-CcccCcchhhhccCCCCCccHHHH-HH------hcCCCHHH-HHHHHH
Confidence 457899999999876 788651 22221111 111 110 0012222 11 11345555 466777
Q ss_pred hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 97 FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 97 l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
.+++++|.++-.||+.++.+-.. .++-.+.=+|-- .++|...|+...+ ....|+||-+.. |+.|..++++.+
T Consensus 109 ~~~~~Gi~~~stpfD~~svd~l~----~~~vd~~KIgS~-~~~N~pLL~~va~--~gKPViLStGma-Tl~Ei~~Ave~i 180 (385)
T 1vli_A 109 YCREKQVIFLSTVCDEGSADLLQ----STSPSAFKIASY-EINHLPLLKYVAR--LNRPMIFSTAGA-EISDVHEAWRTI 180 (385)
T ss_dssp HHHHTTCEEECBCCSHHHHHHHH----TTCCSCEEECGG-GTTCHHHHHHHHT--TCSCEEEECTTC-CHHHHHHHHHHH
T ss_pred HHHHcCCcEEEccCCHHHHHHHH----hcCCCEEEECcc-cccCHHHHHHHHh--cCCeEEEECCCC-CHHHHHHHHHHH
Confidence 89999999999999988765544 333233334443 4799999998765 467899999875 999999999999
Q ss_pred HHcCC-cEEEec
Q 040341 177 KRAGW-GVMASH 187 (251)
Q Consensus 177 ~~~g~-~~ivs~ 187 (251)
++.|- .+++-|
T Consensus 181 ~~~Gn~~iiLlh 192 (385)
T 1vli_A 181 RAEGNNQIAIMH 192 (385)
T ss_dssp HTTTCCCEEEEE
T ss_pred HHCCCCcEEEEe
Confidence 99886 676643
No 131
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=93.83 E-value=0.47 Score=42.21 Aligned_cols=94 Identities=14% Similarity=0.138 Sum_probs=74.5
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHH
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 167 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlt 167 (251)
++=+..+++++++++|..+-+||+.++.+-..++ + .+.-+|-- .++|...++.+. +....|+||-+|..|+.
T Consensus 74 ~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~---v--d~lkIgA~-~~~n~~LLr~~a--~~gkPVilK~G~~~t~~ 145 (288)
T 3tml_A 74 DEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV---V--DVLQTPAF-LCRQTDFIHACA--RSGKPVNIKKGQFLAPH 145 (288)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---C--SEEEECGG-GTTCHHHHHHHH--TSSSCEEEECCTTCCTT
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---C--CEEEECcc-cccCHHHHHHHH--ccCCcEEEeCCCCCCHH
Confidence 4556888898899999999999999998876655 3 34444554 478988877755 45678999999989999
Q ss_pred HHHHHHHHHHHcCC-------cEEEecCC
Q 040341 168 ESIEAVKMSKRAGW-------GVMASHRS 189 (251)
Q Consensus 168 e~l~~~~~a~~~g~-------~~ivs~rs 189 (251)
|...+++.+++.|- .+++-||-
T Consensus 146 e~~~ave~i~~~Gn~~~~~~~~i~L~erg 174 (288)
T 3tml_A 146 DMKNVIDKARDAAREAGLSEDRFMACERG 174 (288)
T ss_dssp HHHHHHHHHHHHHHTTTCCSCCEEEEECC
T ss_pred HHHHHHHHHHHcCCCccCCCCcEEEEeCC
Confidence 99999999988764 68888873
No 132
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=91.70 E-value=1.9 Score=38.17 Aligned_cols=94 Identities=20% Similarity=0.138 Sum_probs=73.3
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHH
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 167 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlt 167 (251)
++=+.++++++++++|..+-+||+.++.+-..++ + .+.-+|-- .++|.+.++.+.. ....|+||-++..|+.
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~---v--d~lqIgA~-~~~n~~LLr~va~--~gkPVilK~G~~~t~~ 148 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI---A--DVLQVPAF-LARQTDLVVAIAK--AGKPVNVKKPQFMSPT 148 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT---C--SEEEECGG-GTTCHHHHHHHHH--TSSCEEEECCTTSCGG
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---C--CEEEECcc-ccCCHHHHHHHHc--cCCcEEEeCCCCCCHH
Confidence 4556888898899999999999999987765544 3 34445554 4789888877654 5668999999988999
Q ss_pred HHHHHHHHHHHcCC-cEEEecCC
Q 040341 168 ESIEAVKMSKRAGW-GVMASHRS 189 (251)
Q Consensus 168 e~l~~~~~a~~~g~-~~ivs~rs 189 (251)
|...+++.+++.|- .+++-||-
T Consensus 149 ei~~ave~i~~~Gn~~i~L~erg 171 (285)
T 3sz8_A 149 QLKHVVSKCGEVGNDRVMLCERG 171 (285)
T ss_dssp GTHHHHHHHHHTTCCCEEEEECC
T ss_pred HHHHHHHHHHHcCCCcEEEEeCC
Confidence 99999999988875 58888873
No 133
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=91.11 E-value=3.8 Score=35.85 Aligned_cols=95 Identities=17% Similarity=0.044 Sum_probs=73.9
Q ss_pred hhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccH
Q 040341 87 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV 166 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtl 166 (251)
-++=+..+.+++++++|-.+=+||+..+.+-.++ .+ .+.-+|-- .++|.+.++.+. +....|++|-++-+|+
T Consensus 60 ~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~---~v--d~~~IgA~-~~rn~~ll~~~a--~~~~PV~lK~G~~~t~ 131 (267)
T 2nwr_A 60 LEYGVKALRKVKEEFGLKITTDIHESWQAEPVAE---VA--DIIQIPAF-LCRQTDLLLAAA--KTGRAVNVKKGQFLAP 131 (267)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHT---TC--SEEEECGG-GTTCHHHHHHHH--TTTSEEEEECCTTCCG
T ss_pred HHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHh---cC--CEEEECcc-cccCHHHHHHHH--cCCCcEEEeCCCCCCH
Confidence 3555677888889999999999999988666554 23 34444553 468888777653 5678999999999999
Q ss_pred HHHHHHHHHHHHcCC-cEEEecCC
Q 040341 167 TESIEAVKMSKRAGW-GVMASHRS 189 (251)
Q Consensus 167 te~l~~~~~a~~~g~-~~ivs~rs 189 (251)
.|.+.+++..+..|- .+++-+|-
T Consensus 132 ~e~~~Av~~i~~~GN~~i~L~~rG 155 (267)
T 2nwr_A 132 WDTKNVVEKLKFGGAKEIYLTERG 155 (267)
T ss_dssp GGGHHHHHHHHHTTCSSEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEEECC
Confidence 999999999998885 78888883
No 134
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=90.99 E-value=0.95 Score=40.65 Aligned_cols=141 Identities=15% Similarity=0.178 Sum_probs=89.4
Q ss_pred CccChhhHHHHHHHhhhcCCceeecCCC---CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhc----cCcce
Q 040341 83 QKVSGDGLKNVYRSFISDHPIVSIEDPF---DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE----KTCNA 155 (251)
Q Consensus 83 ~~~s~~elid~~~~l~~~ypI~~IEDP~---~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~----~a~n~ 155 (251)
..++.+|.+++... +++.++-.||=.| .++||+....+.+.+. .+.+++ +...+.++++++++. +.-..
T Consensus 23 ~~~~~~~Kl~ia~~-L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~--l~r~~~~~i~~a~~al~~ag~~~v 98 (325)
T 3eeg_A 23 CQLNTEEKIIVAKA-LDELGVDVIEAGFPVSSPGDFNSVVEITKAVT-RPTICA--LTRAKEADINIAGEALRFAKRSRI 98 (325)
T ss_dssp --CCTTHHHHHHHH-HHHHTCSEEEEECTTSCHHHHHHHHHHHHHCC-SSEEEE--ECCSCHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCHHHHHHHHHH-HHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCC-CCEEEE--eecCCHHHHHHHHHhhcccCCCEE
Confidence 46899999998887 4777888888754 4678888888877653 344432 224678888887765 32111
Q ss_pred -eE-----------eeccccccHHHHHHHHHHHHHcCCcEEEecC-CCCCCchhHhhh---hhhcccCccccCCCCchhH
Q 040341 156 -LL-----------LKVNQIGSVTESIEAVKMSKRAGWGVMASHR-SGETEDTFIADL---SVGLATGQIKTGAPCRSER 219 (251)
Q Consensus 156 -il-----------IK~nqiGtlte~l~~~~~a~~~g~~~ivs~r-sgEt~d~~iadL---Ava~~~~~ik~G~~~r~Er 219 (251)
+. ++.+.--.+..+.+++++|++.|..+.++.. .+.++..++.++ ++..++..|...+..+.-.
T Consensus 99 ~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~ 178 (325)
T 3eeg_A 99 HTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYML 178 (325)
T ss_dssp EEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCC
T ss_pred EEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcC
Confidence 11 2223334455567889999999999998874 345666666555 4556788887776655433
Q ss_pred HHHhhHHH
Q 040341 220 LAKYNQLL 227 (251)
Q Consensus 220 ~aKyN~ll 227 (251)
=..+-+|+
T Consensus 179 P~~v~~lv 186 (325)
T 3eeg_A 179 PWQYGERI 186 (325)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33334444
No 135
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=89.93 E-value=2.5 Score=38.53 Aligned_cols=140 Identities=10% Similarity=0.113 Sum_probs=89.9
Q ss_pred CCcHHHHHHHHHHHHhcCCc-c---ceeeeeehhhhccccc---CCcceee-c-CCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 29 QESYEGFELLKTAIAKGGYI-G---KIVIGMDVAASEFYDS---KDKTYDL-N-FKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~-~---kI~iglD~Aase~~~~---~~g~Y~l-~-~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
.+.+-|.++|..|. ++|-. + -|++..-.+ .+++.. .+..|.+ + +. .-.++.++ ...+.+.++
T Consensus 18 Gdle~Ak~lI~~A~-~aGad~~~d~avKfQt~~~-d~l~~~~~~~~~~~~~~~~~~------~~el~~e~-~~~L~~~~~ 88 (350)
T 3g8r_A 18 GNVEHGVALIRAIR-ESCQGFDFDFGFKLQYRNL-DTFIHSSFKGRDDVKYVKRFE------ETRLQPEQ-MQKLVAEMK 88 (350)
T ss_dssp TCSHHHHHHHHHHH-HHTTTCCSEEEEEEEECCH-HHHBCGGGTTCCSSSSHHHHH------HTCCCHHH-HHHHHHHHH
T ss_pred CcHHHHHHHHHHHH-HhCCcccCCeeEEccccch-hhhcChhccCccHHHHHHHHH------HhcCCHHH-HHHHHHHHH
Confidence 36799999999988 56643 1 244443221 122211 0011111 0 00 01244444 566777789
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
+.+|.++-.||+.++.+-.. .++-.+.=||-- .++|...|+...+ ....|+||-+- .|+.|..+++++.++.
T Consensus 89 ~~Gi~~~st~fD~~svd~l~----~~~v~~~KI~S~-~~~N~pLL~~va~--~gKPviLstGm-stl~Ei~~Ave~i~~~ 160 (350)
T 3g8r_A 89 ANGFKAICTPFDEESVDLIE----AHGIEIIKIASC-SFTDWPLLERIAR--SDKPVVASTAG-ARREDIDKVVSFMLHR 160 (350)
T ss_dssp HTTCEEEEEECSHHHHHHHH----HTTCCEEEECSS-STTCHHHHHHHHT--SCSCEEEECTT-CCHHHHHHHHHHHHTT
T ss_pred HcCCcEEeccCCHHHHHHHH----HcCCCEEEECcc-cccCHHHHHHHHh--hCCcEEEECCC-CCHHHHHHHHHHHHHc
Confidence 99999999999988766554 343344444443 4799999998765 46789999886 5999999999999888
Q ss_pred CCcEEE
Q 040341 180 GWGVMA 185 (251)
Q Consensus 180 g~~~iv 185 (251)
|-.+++
T Consensus 161 g~~viL 166 (350)
T 3g8r_A 161 GKDLTI 166 (350)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 877777
No 136
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=88.56 E-value=0.94 Score=38.96 Aligned_cols=110 Identities=10% Similarity=0.140 Sum_probs=73.7
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.++++.++..+.++ +-++-.||=++...+ .+..+.+.+++++ .++|-. +|.++++++.+++.|+- +++-|+-
T Consensus 43 ~~~~~a~~~a~al~-~gGi~~iEvt~~t~~a~e~I~~l~~~~~~--~~iGaG-TVlt~~~a~~Ai~AGA~--fIvsP~~- 115 (232)
T 4e38_A 43 DNAEDIIPLGKVLA-ENGLPAAEITFRSDAAVEAIRLLRQAQPE--MLIGAG-TILNGEQALAAKEAGAT--FVVSPGF- 115 (232)
T ss_dssp SSGGGHHHHHHHHH-HTTCCEEEEETTSTTHHHHHHHHHHHCTT--CEEEEE-CCCSHHHHHHHHHHTCS--EEECSSC-
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEEeCCCCCHHHHHHHHHHhCCC--CEEeEC-CcCCHHHHHHHHHcCCC--EEEeCCC-
Confidence 35667778777754 447888887776444 4556667777743 467766 57889999999988764 3344541
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
..++++.|+++|+.+|.|..+. .=+--|...++.++|+
T Consensus 116 -----~~~vi~~~~~~gi~~ipGv~Tp-----tEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 116 -----NPNTVRACQEIGIDIVPGVNNP-----STVEAALEMGLTTLKF 153 (232)
T ss_dssp -----CHHHHHHHHHHTCEEECEECSH-----HHHHHHHHTTCCEEEE
T ss_pred -----CHHHHHHHHHcCCCEEcCCCCH-----HHHHHHHHcCCCEEEE
Confidence 3467777888999999987621 1144456667777765
No 137
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.32 E-value=3.9 Score=36.73 Aligned_cols=131 Identities=11% Similarity=0.102 Sum_probs=84.9
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecC------CC--------CcccHHHHHHHHhhhCC-ceEEEcccccccCHHHHHH
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIED------PF--------DQDDWEHHAELTGKIGR-HVQIVGDDLLVTNPKRVEK 146 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IED------P~--------~e~D~~~~~~l~~~lg~-~~~ivgDdl~vtn~~~i~~ 146 (251)
+..++.++.++++..| ++-++-+||= |+ .++||+-.+.+.+...+ ++++.+.- -..+.+.+++
T Consensus 24 ~~~~~~e~k~~i~~~L-~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p-~~~~~~~i~~ 101 (345)
T 1nvm_A 24 RHQYTLDDVRAIARAL-DKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLP-GIGSVHDLKN 101 (345)
T ss_dssp TTCCCHHHHHHHHHHH-HHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECB-TTBCHHHHHH
T ss_pred CCCCCHHHHHHHHHHH-HHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecC-CcccHHHHHH
Confidence 3568999999988885 7778888887 33 36889888888776432 33333321 2336888998
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEec-CCCCCCchhHhhh---hhhcccCccccCCCCc
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASH-RSGETEDTFIADL---SVGLATGQIKTGAPCR 216 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~-rsgEt~d~~iadL---Ava~~~~~ik~G~~~r 216 (251)
+.+.+. +.+.|- ....-+.++.++++.|+++|+.+.++- .+..++..++..+ +.+.++..|-..+..+
T Consensus 102 a~~aGv-d~v~I~-~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G 173 (345)
T 1nvm_A 102 AYQAGA-RVVRVA-THCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGG 173 (345)
T ss_dssp HHHHTC-CEEEEE-EETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTC
T ss_pred HHhCCc-CEEEEE-EeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcC
Confidence 887654 444442 222223467888999999999998775 3455666665554 5556666665544433
No 138
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=88.24 E-value=4.1 Score=35.69 Aligned_cols=114 Identities=12% Similarity=0.135 Sum_probs=75.5
Q ss_pred ccChhhHHHHHHHhhhcCCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
.+++.++...|.+- --.-+++ ++++.....+....+.+.+ .+||.--| |+.++..+..+...|+ ++|+|=..
T Consensus 78 ~~dp~~~A~~y~~~--GA~~IsVltd~~~f~Gs~~~L~~ir~~v--~lPVl~Kd-fi~d~~qi~ea~~~GA-D~VlLi~a 151 (272)
T 3tsm_A 78 DFDPPALAKAYEEG--GAACLSVLTDTPSFQGAPEFLTAARQAC--SLPALRKD-FLFDPYQVYEARSWGA-DCILIIMA 151 (272)
T ss_dssp SCCHHHHHHHHHHT--TCSEEEEECCSTTTCCCHHHHHHHHHTS--SSCEEEES-CCCSTHHHHHHHHTTC-SEEEEETT
T ss_pred CCCHHHHHHHHHHC--CCCEEEEeccccccCCCHHHHHHHHHhc--CCCEEECC-ccCCHHHHHHHHHcCC-CEEEEccc
Confidence 45677766666541 1123333 6677777888888888888 56776666 7889999998877765 55555443
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
-. +-.+.-+.++.|++.|+.++|...+.|. ++-|..+++..|
T Consensus 152 ~L-~~~~l~~l~~~a~~lGl~~lvevh~~eE-----l~~A~~~ga~iI 193 (272)
T 3tsm_A 152 SV-DDDLAKELEDTAFALGMDALIEVHDEAE-----MERALKLSSRLL 193 (272)
T ss_dssp TS-CHHHHHHHHHHHHHTTCEEEEEECSHHH-----HHHHTTSCCSEE
T ss_pred cc-CHHHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHhcCCCEE
Confidence 33 4466777888999999999988754332 344455555544
No 139
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=88.12 E-value=2.9 Score=39.02 Aligned_cols=128 Identities=9% Similarity=0.067 Sum_probs=82.9
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCCC---cccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~~---e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+..+|.+|-++++.. +++.++-.||=.+. +.|++....+.+. +.+.++++ ....|.++++.+++.+.- .|.|
T Consensus 55 ~~~~s~eeKl~Ia~~-L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~-~~~~~v~~--~~r~~~~di~~A~~aG~~-~V~i 129 (423)
T 3ivs_A 55 NAFFDTEKKIQIAKA-LDNFGVDYIELTSPVASEQSRQDCEAICKL-GLKCKILT--HIRCHMDDARVAVETGVD-GVDV 129 (423)
T ss_dssp TCCCCHHHHHHHHHH-HHHHTCSEEEECCTTSCHHHHHHHHHHHTS-CCSSEEEE--EEESCHHHHHHHHHTTCS-EEEE
T ss_pred CCCcCHHHHHHHHHH-HHHcCCCEEEEeecccCHHHHHHHHHHHhc-CCCCEEEE--eeccChhhHHHHHHcCCC-EEEE
Confidence 457899999998887 58889888988664 5677777777653 44566654 235688999999887643 2222
Q ss_pred -------------eccccccHHHHHHHHHHHHHcCCcEEEecCC-CCCCchhHhhh---hhhcccCccccCCC
Q 040341 159 -------------KVNQIGSVTESIEAVKMSKRAGWGVMASHRS-GETEDTFIADL---SVGLATGQIKTGAP 214 (251)
Q Consensus 159 -------------K~nqiGtlte~l~~~~~a~~~g~~~ivs~rs-gEt~d~~iadL---Ava~~~~~ik~G~~ 214 (251)
+-+.-..+..+.+++++|+++|..+.++... ..++..++.++ +...++..|...+.
T Consensus 130 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DT 202 (423)
T 3ivs_A 130 VIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADT 202 (423)
T ss_dssp EEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEET
T ss_pred EeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCc
Confidence 1122223566777999999999999887531 22333444433 45566666655443
No 140
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=87.68 E-value=2.6 Score=31.58 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=45.2
Q ss_pred CCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCceeec
Q 040341 28 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE 107 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI~~IE 107 (251)
+.+.|+.|......|++.||+- . ...||+|+-|-..+|+++|+-..+-
T Consensus 8 fstdeetlrkfkdiikkngfkv-----------------------r---------tvrspqelkdsieelvkkynativv 55 (134)
T 2l69_A 8 FSTDEETLRKFKDIIKKNGFKV-----------------------R---------TVRSPQELKDSIEELVKKYNATIVV 55 (134)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEE-----------------------E---------EECSHHHHHHHHHHHTTCCCCEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCceE-----------------------E---------EecCHHHHHHHHHHHHHHhCCeEEE
Confidence 4566889998999888777641 0 2346778888888888888722111
Q ss_pred CCCCcccHHHHH-HHHhhhCCceEEEccc
Q 040341 108 DPFDQDDWEHHA-ELTGKIGRHVQIVGDD 135 (251)
Q Consensus 108 DP~~e~D~~~~~-~l~~~lg~~~~ivgDd 135 (251)
--.+...|..-+ .|-+.+|.++.|+--|
T Consensus 56 vvvddkewaekairfvkslgaqvliiiyd 84 (134)
T 2l69_A 56 VVVDDKEWAEKAIRFVKSLGAQVLIIIYD 84 (134)
T ss_dssp EECSSHHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred EEEccHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 112222332211 3556677777666433
No 141
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=87.38 E-value=1.8 Score=37.86 Aligned_cols=117 Identities=16% Similarity=0.216 Sum_probs=73.1
Q ss_pred ccChhhHHHHHHHhhhcCCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
.+++.++...|.+- --.-+++ ++++-...++....+.+.+ .+||+.-| |+.++.++..+...|+ ++|+|=..
T Consensus 71 ~~~p~~~A~~y~~~--GA~~isvltd~~~f~Gs~~~l~~ir~~v--~lPvl~kd-fiid~~qv~~A~~~GA-D~VlLi~a 144 (272)
T 3qja_A 71 IADPAKLAQAYQDG--GARIVSVVTEQRRFQGSLDDLDAVRASV--SIPVLRKD-FVVQPYQIHEARAHGA-DMLLLIVA 144 (272)
T ss_dssp --CHHHHHHHHHHT--TCSEEEEECCGGGHHHHHHHHHHHHHHC--SSCEEEES-CCCSHHHHHHHHHTTC-SEEEEEGG
T ss_pred CCCHHHHHHHHHHc--CCCEEEEecChhhcCCCHHHHHHHHHhC--CCCEEECc-cccCHHHHHHHHHcCC-CEEEEecc
Confidence 35666776666541 1223333 5566555677777777777 56666666 7889988999887765 55554222
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTG 212 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G 212 (251)
.-+..+.-+.++.|++.|+.+|++..+.|- +..|...++.+|-++
T Consensus 145 -~l~~~~l~~l~~~a~~lGl~~lvev~t~ee-----~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 145 -ALEQSVLVSMLDRTESLGMTALVEVHTEQE-----ADRALKAGAKVIGVN 189 (272)
T ss_dssp -GSCHHHHHHHHHHHHHTTCEEEEEESSHHH-----HHHHHHHTCSEEEEE
T ss_pred -cCCHHHHHHHHHHHHHCCCcEEEEcCCHHH-----HHHHHHCCCCEEEEC
Confidence 123456667788899999999988754321 445556666666655
No 142
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=87.29 E-value=3.9 Score=37.36 Aligned_cols=124 Identities=12% Similarity=0.107 Sum_probs=79.8
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCCC---cccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~~---e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+..++.+|.+.++..| ++.++-+||=.|. +.|++.+..+.+. +.+++++.- ...++++++++++.+.- .+.|
T Consensus 19 ~~~~~~~~k~~ia~~L-~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~-~~~~~v~~~--~r~~~~di~~a~~~g~~-~v~i 93 (382)
T 2ztj_A 19 KANFSTQDKVEIAKAL-DEFGIEYIEVTTPVASPQSRKDAEVLASL-GLKAKVVTH--IQCRLDAAKVAVETGVQ-GIDL 93 (382)
T ss_dssp TCCCCHHHHHHHHHHH-HHHTCSEEEECCTTSCHHHHHHHHHHHTS-CCSSEEEEE--EESCHHHHHHHHHTTCS-EEEE
T ss_pred CCCcCHHHHHHHHHHH-HHcCcCEEEEcCCcCCHHHHHHHHHHHhc-CCCcEEEEE--cccChhhHHHHHHcCCC-EEEE
Confidence 3578999999988875 8889999998775 4677777777654 445666542 22467888888876532 2221
Q ss_pred --ec------cccccH----HHHHHHHHHHHHcC--CcEEEecC-CCCCCchhHhhhh---hhcccCcccc
Q 040341 159 --KV------NQIGSV----TESIEAVKMSKRAG--WGVMASHR-SGETEDTFIADLS---VGLATGQIKT 211 (251)
Q Consensus 159 --K~------nqiGtl----te~l~~~~~a~~~g--~~~ivs~r-sgEt~d~~iadLA---va~~~~~ik~ 211 (251)
+. +---|. ..+.++++.|++.| +.+.++.. +..++..++.+++ ... +..|..
T Consensus 94 ~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 94 LFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp EECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred EeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEe
Confidence 11 111244 44778889999999 99988864 3345556665554 334 445543
No 143
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.02 E-value=4.4 Score=36.44 Aligned_cols=70 Identities=11% Similarity=0.165 Sum_probs=50.4
Q ss_pred cChhhHHHHHHHhhhcCCceeecCC-----------CCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDP-----------FDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP-----------~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
++.+|.+.+.+. ++++++-+|+-. ..+ .+++..+++.+.+ +++|++.. .+++++.+++.++.+.
T Consensus 236 ~~~~~~~~la~~-L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~G-gi~t~e~a~~~l~~G~ 311 (349)
T 3hgj_A 236 WSLEDTLAFARR-LKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVG-LITTPEQAETLLQAGS 311 (349)
T ss_dssp CCHHHHHHHHHH-HHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECS-SCCCHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEEC-CCCCHHHHHHHHHCCC
Confidence 566777776665 577776665522 111 3566677788888 68888887 6789999999999998
Q ss_pred cceeEe
Q 040341 153 CNALLL 158 (251)
Q Consensus 153 ~n~ilI 158 (251)
|+.|.+
T Consensus 312 aD~V~i 317 (349)
T 3hgj_A 312 ADLVLL 317 (349)
T ss_dssp CSEEEE
T ss_pred ceEEEe
Confidence 887665
No 144
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=86.65 E-value=1.6 Score=40.01 Aligned_cols=141 Identities=15% Similarity=0.171 Sum_probs=89.0
Q ss_pred CccChhhHHHHHHHhhhcCCceeecCCCC---cccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHh--ccCc-ce-
Q 040341 83 QKVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIK--EKTC-NA- 155 (251)
Q Consensus 83 ~~~s~~elid~~~~l~~~ypI~~IEDP~~---e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~--~~a~-n~- 155 (251)
..++.+|.+.+... +++.++-.||=.|. +.||+....+.+.+. .+.+++ +.-.|.++++++++ .++. ..
T Consensus 29 ~~~~~~~Kl~ia~~-L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~--l~r~~~~di~~a~~al~~ag~~~v 104 (370)
T 3rmj_A 29 AAMTKEEKIRVARQ-LEKLGVDIIEAGFAAASPGDFEAVNAIAKTIT-KSTVCS--LSRAIERDIRQAGEAVAPAPKKRI 104 (370)
T ss_dssp CCCCHHHHHHHHHH-HHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCS-SSEEEE--EEESSHHHHHHHHHHHTTSSSEEE
T ss_pred CCcCHHHHHHHHHH-HHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCC-CCeEEE--EecCCHHHHHHHHHHHhhCCCCEE
Confidence 46899999998887 58888888887543 678888888877653 344442 12248999998876 2221 12
Q ss_pred -eEeecccc-------cc----HHHHHHHHHHHHHcCCcEEEecC-CCCCCchhHhhh---hhhcccCccccCCCCchhH
Q 040341 156 -LLLKVNQI-------GS----VTESIEAVKMSKRAGWGVMASHR-SGETEDTFIADL---SVGLATGQIKTGAPCRSER 219 (251)
Q Consensus 156 -ilIK~nqi-------Gt----lte~l~~~~~a~~~g~~~ivs~r-sgEt~d~~iadL---Ava~~~~~ik~G~~~r~Er 219 (251)
+.++.+-+ -| +..+.+++++|+++|..+.+|+. .+.++..++.++ +...++..|...+..+.--
T Consensus 105 ~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~ 184 (370)
T 3rmj_A 105 HTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSI 184 (370)
T ss_dssp EEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCC
T ss_pred EEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcC
Confidence 23333211 23 44445567899999999988874 355666776555 4566777777666544333
Q ss_pred HHHhhHHH
Q 040341 220 LAKYNQLL 227 (251)
Q Consensus 220 ~aKyN~ll 227 (251)
=..+-+|+
T Consensus 185 P~~~~~lv 192 (370)
T 3rmj_A 185 PYKTEEFF 192 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333343
No 145
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.28 E-value=1.5 Score=39.07 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=72.4
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHH
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 167 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlt 167 (251)
++=+.++++++++++|..+-+||+.++.+-..++ + .+.-+|-- .++|.+.++.+. +....|+||-++..|+.
T Consensus 98 ~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~---v--d~lkIgA~-~~~n~~LLr~va--~~gkPVilK~Gms~t~~ 169 (298)
T 3fs2_A 98 EKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV---V--DVLQIPAF-LCRQTDLLIAAA--RTGRVVNVKKGQFLAPW 169 (298)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT---C--SEEEECGG-GTTCHHHHHHHH--HTTSEEEEECCTTCCGG
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh---C--CEEEECcc-ccCCHHHHHHHH--ccCCcEEEeCCCCCCHH
Confidence 4556888888899999999999988776554333 3 44455554 478988887755 35679999999988999
Q ss_pred HHHHHHHHHHHcCC-cEEEecCC
Q 040341 168 ESIEAVKMSKRAGW-GVMASHRS 189 (251)
Q Consensus 168 e~l~~~~~a~~~g~-~~ivs~rs 189 (251)
|...+++.+++.|- .+++-||-
T Consensus 170 ei~~ave~i~~~Gn~~iiL~erg 192 (298)
T 3fs2_A 170 DMKNVLAKITESGNPNVLATERG 192 (298)
T ss_dssp GHHHHHHHHHTTTCCCEEEEECC
T ss_pred HHHHHHHHHHHcCCCeEEEEECC
Confidence 99999999998875 58888873
No 146
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=86.15 E-value=3.5 Score=36.58 Aligned_cols=129 Identities=12% Similarity=0.114 Sum_probs=78.9
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCC---------CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPF---------DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~---------~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
+..++.++.+.++..| ++.++-.||=.+ -.+.++-+..+.+. ..+.+++ .+.|.+.++++++.+.
T Consensus 22 ~~~~~~e~k~~i~~~L-~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~--~~~~~~~---l~~~~~~i~~a~~~g~ 95 (307)
T 1ydo_A 22 PVWIATEDKITWINQL-SRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE--KGVTYAA---LVPNQRGLENALEGGI 95 (307)
T ss_dssp SSCCCHHHHHHHHHHH-HTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC--TTCEEEE---ECCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHH-HHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc--CCCeEEE---EeCCHHhHHHHHhCCc
Confidence 3568999999988874 888988888753 12333334333332 2344432 2468899999988764
Q ss_pred cce-eEeecccc-------cc----HHHHHHHHHHHHHcCCcEE------EecC-CCCCCchhHhhhh---hhcccCccc
Q 040341 153 CNA-LLLKVNQI-------GS----VTESIEAVKMSKRAGWGVM------ASHR-SGETEDTFIADLS---VGLATGQIK 210 (251)
Q Consensus 153 ~n~-ilIK~nqi-------Gt----lte~l~~~~~a~~~g~~~i------vs~r-sgEt~d~~iadLA---va~~~~~ik 210 (251)
-.. +.++.+.+ -| +..+.++++.|++.|..+. +|+- .+.++..++.+++ ...++..|.
T Consensus 96 ~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 96 NEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp SEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred CEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 332 22333211 23 4456788899999999985 2221 2446667777776 666777776
Q ss_pred cCCCCc
Q 040341 211 TGAPCR 216 (251)
Q Consensus 211 ~G~~~r 216 (251)
..+..+
T Consensus 176 l~DT~G 181 (307)
T 1ydo_A 176 LGDTIG 181 (307)
T ss_dssp EECSSC
T ss_pred EcCCCC
Confidence 655443
No 147
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=85.54 E-value=1.4 Score=37.64 Aligned_cols=111 Identities=11% Similarity=0.104 Sum_probs=76.5
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
..++++.++.-+.| -+-++-.||=+|.-.+ .+..+.+.+++++ .+||-. +|.+++.++++++.|+- +++-|+-
T Consensus 21 ~~~~~~a~~~a~al-~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~--~~IGAG-TVlt~~~a~~ai~AGA~--fivsP~~ 94 (217)
T 3lab_A 21 IDDLVHAIPMAKAL-VAGGVHLLEVTLRTEAGLAAISAIKKAVPE--AIVGAG-TVCTADDFQKAIDAGAQ--FIVSPGL 94 (217)
T ss_dssp CSCGGGHHHHHHHH-HHTTCCEEEEETTSTTHHHHHHHHHHHCTT--SEEEEE-CCCSHHHHHHHHHHTCS--EEEESSC
T ss_pred cCCHHHHHHHHHHH-HHcCCCEEEEeCCCccHHHHHHHHHHHCCC--CeEeec-cccCHHHHHHHHHcCCC--EEEeCCC
Confidence 35678888887775 4448888898888555 4566777888843 577887 78899999999987664 4455662
Q ss_pred cccHHHHHHHHHHHHHcCC------cEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 163 IGSVTESIEAVKMSKRAGW------GVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 163 iGtlte~l~~~~~a~~~g~------~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
.-++++.|+++|+ .+|-|..+.+- +--|...++..+|+
T Consensus 95 ------~~evi~~~~~~~v~~~~~~~~~PG~~TptE-----~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 95 ------TPELIEKAKQVKLDGQWQGVFLPGVATASE-----VMIAAQAGITQLKC 138 (217)
T ss_dssp ------CHHHHHHHHHHHHHCSCCCEEEEEECSHHH-----HHHHHHTTCCEEEE
T ss_pred ------cHHHHHHHHHcCCCccCCCeEeCCCCCHHH-----HHHHHHcCCCEEEE
Confidence 2366777888888 88887753221 33445556666654
No 148
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=84.75 E-value=4.8 Score=35.25 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=76.4
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCC---------CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPF---------DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~---------~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
+..++.+|.+.++..| ++.++-.||=.+ -.+-++-+..+.+ . ..+.+++ .+.|.+.++++.+.+.
T Consensus 21 ~~~~~~e~k~~i~~~L-~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~-~-~~~~~~~---l~~~~~~i~~a~~ag~ 94 (298)
T 2cw6_A 21 KNIVSTPVKIKLIDML-SEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQK-F-PGINYPV---LTPNLKGFEAAVAAGA 94 (298)
T ss_dssp SSCCCHHHHHHHHHHH-HHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCC-C-TTCBCCE---ECCSHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHH-HHcCcCEEEECCCcCcccccccCCHHHHHHHHhh-C-CCCEEEE---EcCCHHhHHHHHHCCC
Confidence 3568999999988874 888888888743 2332333333332 2 1233332 2368899999988764
Q ss_pred cce-eEeeccc-----------cccHHHHHHHHHHHHHcCCcEEEecC-------CCCCCchhHhhhh---hhcccCccc
Q 040341 153 CNA-LLLKVNQ-----------IGSVTESIEAVKMSKRAGWGVMASHR-------SGETEDTFIADLS---VGLATGQIK 210 (251)
Q Consensus 153 ~n~-ilIK~nq-----------iGtlte~l~~~~~a~~~g~~~ivs~r-------sgEt~d~~iadLA---va~~~~~ik 210 (251)
-.. +.++.+. -..+..+.++++.|+++|+.+.+.-. .+.++..++.+++ ...++..|.
T Consensus 95 ~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 174 (298)
T 2cw6_A 95 KEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEIS 174 (298)
T ss_dssp SEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 322 2233321 12345667788999999999853221 1345556655554 667777776
Q ss_pred cCCCCc
Q 040341 211 TGAPCR 216 (251)
Q Consensus 211 ~G~~~r 216 (251)
..+..+
T Consensus 175 l~DT~G 180 (298)
T 2cw6_A 175 LGDTIG 180 (298)
T ss_dssp EEETTS
T ss_pred ecCCCC
Confidence 554433
No 149
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=84.74 E-value=4.4 Score=35.09 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=75.7
Q ss_pred ccChhhHHHHHHHhhhcCCceee-cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSI-EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~I-EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
.+++.+|...|.+- ...|-.+ |.+|-...++......+.+ .+||.--| |++.+-.+..+... .+++++|=...
T Consensus 60 ~~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v--~lPvLrKD-fi~~~~qi~ea~~~-GAD~ilLi~a~ 133 (251)
T 1i4n_A 60 DASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLT--CRPILAKD-FYIDTVQVKLASSV-GADAILIIARI 133 (251)
T ss_dssp TCCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTC--CSCEEEEC-CCCSTHHHHHHHHT-TCSEEEEEGGG
T ss_pred CCCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhC--CCCEEEee-CCCCHHHHHHHHHc-CCCEEEEeccc
Confidence 45788999999884 5555433 7777778888899998888 78888888 78888888886555 46677766554
Q ss_pred cccHHHHHHHHHHHHHcCCcEEEecCCCC
Q 040341 163 IGSVTESIEAVKMSKRAGWGVMASHRSGE 191 (251)
Q Consensus 163 iGtlte~l~~~~~a~~~g~~~ivs~rsgE 191 (251)
. +..+.-+.++.|++.|+.++|-..+.|
T Consensus 134 l-~~~~l~~l~~~a~~lGl~~lvEv~~~e 161 (251)
T 1i4n_A 134 L-TAEQIKEIYEAAEELGMDSLVEVHSRE 161 (251)
T ss_dssp S-CHHHHHHHHHHHHTTTCEEEEEECSHH
T ss_pred C-CHHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 3 335667788899999999999986444
No 150
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=84.72 E-value=3.5 Score=33.54 Aligned_cols=111 Identities=17% Similarity=0.048 Sum_probs=65.9
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.+.+++.++... +.++++-.||=.+...+ .+..+.+.+.++....|..+ ++.|++.++.+++.+ ++.+ +-|+--
T Consensus 19 ~~~~~~~~~~~~-~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~--~v~~~~~~~~a~~~G-ad~i-v~~~~~ 93 (205)
T 1wa3_A 19 NSVEEAKEKALA-VFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAG--TVTSVEQCRKAVESG-AEFI-VSPHLD 93 (205)
T ss_dssp SSHHHHHHHHHH-HHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEE--SCCSHHHHHHHHHHT-CSEE-ECSSCC
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEec--ccCCHHHHHHHHHcC-CCEE-EcCCCC
Confidence 466776665555 56666544432222212 23355666665433434333 467999999888765 5666 555421
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
-++++.|++.|+.++.+..+.+ -+..|+..++..+|+
T Consensus 94 ------~~~~~~~~~~g~~vi~g~~t~~-----e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 94 ------EEISQFCKEKGVFYMPGVMTPT-----ELVKAMKLGHTILKL 130 (205)
T ss_dssp ------HHHHHHHHHHTCEEECEECSHH-----HHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHcCCcEECCcCCHH-----HHHHHHHcCCCEEEE
Confidence 3577788899999998765422 144566667777765
No 151
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=83.40 E-value=3.6 Score=36.18 Aligned_cols=129 Identities=14% Similarity=0.092 Sum_probs=79.3
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCCC--c------ccH-HHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPFD--Q------DDW-EHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~~--e------~D~-~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
+..++.++.+.++..| ++.++-.||-.+. + .|+ +-+..+.+. ..++++. .+.|.+.++++++.+.
T Consensus 24 ~~~~~~e~k~~i~~~L-~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~---l~~~~~~i~~a~~aG~ 97 (302)
T 2ftp_A 24 KQPIEVADKIRLVDDL-SAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR--PGVTYAA---LAPNLKGFEAALESGV 97 (302)
T ss_dssp SSCCCHHHHHHHHHHH-HHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC--TTSEEEE---ECCSHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHH-HHcCcCEEEECCCcCccccccccCHHHHHHHhhhc--CCCEEEE---EeCCHHHHHHHHhCCc
Confidence 3568999999988874 8888888887541 1 233 333333332 2455543 2368999999999875
Q ss_pred cceeE-eecccc-------c----cHHHHHHHHHHHHHcCCcEE--EecC-----CCCCCchhHhhhhh---hcccCccc
Q 040341 153 CNALL-LKVNQI-------G----SVTESIEAVKMSKRAGWGVM--ASHR-----SGETEDTFIADLSV---GLATGQIK 210 (251)
Q Consensus 153 ~n~il-IK~nqi-------G----tlte~l~~~~~a~~~g~~~i--vs~r-----sgEt~d~~iadLAv---a~~~~~ik 210 (251)
...-+ ++.+.+ - .+..+.+++++|+++|..+. +++. .+.++..++.+++- .+++..|-
T Consensus 98 ~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 177 (302)
T 2ftp_A 98 KEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVS 177 (302)
T ss_dssp CEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 54332 344321 2 33456778889999999984 2221 13466677777664 66777666
Q ss_pred cCCCCc
Q 040341 211 TGAPCR 216 (251)
Q Consensus 211 ~G~~~r 216 (251)
..+..+
T Consensus 178 l~DT~G 183 (302)
T 2ftp_A 178 LGDTIG 183 (302)
T ss_dssp EEESSS
T ss_pred EeCCCC
Confidence 554433
No 152
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.20 E-value=12 Score=33.38 Aligned_cols=71 Identities=4% Similarity=0.062 Sum_probs=51.4
Q ss_pred ccChhhHHHHHHHhhhcCCceeec--------C--CCCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIE--------D--PFDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IE--------D--P~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
.++.++.+++.+. +.++++-+|+ + |..+ .+++.-+++.+.+ +++|++.- -+++++++++.++.+.
T Consensus 225 g~~~~~~~~~a~~-l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~G-gi~s~~~a~~~l~~G~ 300 (338)
T 1z41_A 225 GLDIADHIGFAKW-MKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVG-MITDGSMAEEILQNGR 300 (338)
T ss_dssp SCCHHHHHHHHHH-HHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECS-SCCSHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHH-HHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEEC-CCCCHHHHHHHHHcCC
Confidence 3566777776665 5777766665 2 3232 3566677888888 67888777 5789999999999998
Q ss_pred cceeEe
Q 040341 153 CNALLL 158 (251)
Q Consensus 153 ~n~ilI 158 (251)
|+.|.+
T Consensus 301 aD~V~i 306 (338)
T 1z41_A 301 ADLIFI 306 (338)
T ss_dssp CSEEEE
T ss_pred ceEEee
Confidence 888765
No 153
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=81.85 E-value=9.3 Score=34.38 Aligned_cols=69 Identities=12% Similarity=0.163 Sum_probs=48.1
Q ss_pred cChhhHHHHHHHhhhcCCceeecCC----------CCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDP----------FDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTC 153 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP----------~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~ 153 (251)
.+.++.+.+.+. ++++ +-+|+=. ..+ .+|+--+.+.+.+ +++|++-- -+++++.++++++.+.|
T Consensus 227 ~~~~~~~~~a~~-l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~G-gi~t~e~Ae~~l~~G~a 301 (343)
T 3kru_A 227 INIDMMVEYINM-IKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVG-LITTQELAEEILSNERA 301 (343)
T ss_dssp CCHHHHHHHHHH-HTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEES-SCCCHHHHHHHHHTTSC
T ss_pred ccHHHHHHHHHH-hhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc--Ccccceee-eeeHHHHHHHHHhchhh
Confidence 566787776665 5666 6555431 122 3566666777888 57787776 57899999999999988
Q ss_pred ceeEe
Q 040341 154 NALLL 158 (251)
Q Consensus 154 n~ilI 158 (251)
+.|.+
T Consensus 302 D~V~i 306 (343)
T 3kru_A 302 DLVAL 306 (343)
T ss_dssp SEEEE
T ss_pred HHHHH
Confidence 87665
No 154
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=81.27 E-value=3.3 Score=37.14 Aligned_cols=126 Identities=12% Similarity=0.068 Sum_probs=82.8
Q ss_pred CccChhhHHHHHH-HhhhcCCceeecC--CC-CcccHHHHHHHHh------hhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 83 QKVSGDGLKNVYR-SFISDHPIVSIED--PF-DQDDWEHHAELTG------KIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 83 ~~~s~~elid~~~-~l~~~ypI~~IED--P~-~e~D~~~~~~l~~------~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
..++.+|.++++. . +++.++-.||= |. .++||+....+.+ .+. .+.+++- +.+.+.++.+++.+.
T Consensus 36 ~~~~~~~k~~i~~~~-L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~i~~l---~~~~~~i~~a~~~g~ 110 (337)
T 3ble_A 36 VSFSTSEKLNIAKFL-LQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTE-RIEILGF---VDGNKTVDWIKDSGA 110 (337)
T ss_dssp CCCCHHHHHHHHHHH-HHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGG-GEEEEEE---SSTTHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHH-HHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCC-CCeEEEE---ccchhhHHHHHHCCC
Confidence 4589999999888 7 58889989987 44 3788888888877 452 4556543 445558888877653
Q ss_pred cceeE--eeccc-----------cccHHHHHHHHHHHHHcCCcEEEecCC----CCCCchhHhhh---hhhcccCccccC
Q 040341 153 CNALL--LKVNQ-----------IGSVTESIEAVKMSKRAGWGVMASHRS----GETEDTFIADL---SVGLATGQIKTG 212 (251)
Q Consensus 153 ~n~il--IK~nq-----------iGtlte~l~~~~~a~~~g~~~ivs~rs----gEt~d~~iadL---Ava~~~~~ik~G 212 (251)
+.+. ++.+- --.+..+.++++.|++.|..+.++... +.++..++.++ +...++..|...
T Consensus 111 -~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 189 (337)
T 3ble_A 111 -KVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLP 189 (337)
T ss_dssp -CEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEE
T ss_pred -CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3332 22221 113456678888999999999888632 33445555554 455677777654
Q ss_pred CC
Q 040341 213 AP 214 (251)
Q Consensus 213 ~~ 214 (251)
+.
T Consensus 190 DT 191 (337)
T 3ble_A 190 DT 191 (337)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 155
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=80.15 E-value=3.7 Score=36.41 Aligned_cols=113 Identities=19% Similarity=0.278 Sum_probs=67.4
Q ss_pred ccChhhHHHHHHHhhhcCCc--eee---cCCCCcccHHHHHHHHhhhCC--ceEEEcccccccCHHHHHHHHhccCccee
Q 040341 84 KVSGDGLKNVYRSFISDHPI--VSI---EDPFDQDDWEHHAELTGKIGR--HVQIVGDDLLVTNPKRVEKAIKEKTCNAL 156 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI--~~I---EDP~~e~D~~~~~~l~~~lg~--~~~ivgDdl~vtn~~~i~~~i~~~a~n~i 156 (251)
.+|++|+++...++ .++++ +.| |+|+...+.+.+.++-+.+.. .+.|+..- -..+.+.+++..+.| ++.+
T Consensus 90 ~ls~eei~~~~~~~-~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~-g~~~~e~l~~L~~aG-~~~i 166 (350)
T 3t7v_A 90 RLTMEEIKETCKTL-KGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISP-GLMDNATLLKAREKG-ANFL 166 (350)
T ss_dssp BCCHHHHHHHHHHH-TTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEEC-SSCCHHHHHHHHHTT-EEEE
T ss_pred eCCHHHHHHHHHHH-HHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeC-CCCCHHHHHHHHHcC-CCEE
Confidence 46899999988875 44442 233 677643233333443333311 23343221 224677777665554 4444
Q ss_pred Eeec-----------cccccHHHHHHHHHHHHHcCCcE----EEecCCCCCCchhHhhhh
Q 040341 157 LLKV-----------NQIGSVTESIEAVKMSKRAGWGV----MASHRSGETEDTFIADLS 201 (251)
Q Consensus 157 lIK~-----------nqiGtlte~l~~~~~a~~~g~~~----ivs~rsgEt~d~~iadLA 201 (251)
.+-+ +.-.+..+.+++++.+++.|+.+ |+|+ |||.++++.++.
T Consensus 167 ~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~e~~~~~l~ 224 (350)
T 3t7v_A 167 ALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV--GNDIESTILSLR 224 (350)
T ss_dssp ECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS--SCCHHHHHHHHH
T ss_pred EEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec--CCCHHHHHHHHH
Confidence 4322 23368899999999999999986 5666 899877766554
No 156
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=78.14 E-value=5.4 Score=35.08 Aligned_cols=131 Identities=13% Similarity=0.136 Sum_probs=81.3
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCCC---cccHHHHHHHHhhhCCceEEEcccccc-cCHHHHHHHHhc--c-Ccc
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHHAELTGKIGRHVQIVGDDLLV-TNPKRVEKAIKE--K-TCN 154 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~~---e~D~~~~~~l~~~lg~~~~ivgDdl~v-tn~~~i~~~i~~--~-a~n 154 (251)
+..++.+|.+++... +++.++-.||=.|. ++||+....+.+... .+.+++ ++ .+.++++.+++. + ...
T Consensus 21 ~~~~~~~~K~~i~~~-L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~---l~~~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 21 GVNFDVKEKIQIALQ-LEKLGIDVIEAGFPISSPGDFECVKAIAKAIK-HCSVTG---LARCVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp --CCCHHHHHHHHHH-HHHHTCSEEEEECGGGCHHHHHHHHHHHHHCC-SSEEEE---EEESSHHHHHHHHHHHTTCSSE
T ss_pred CCCCCHHHHHHHHHH-HHHcCCCEEEEeCCCCCccHHHHHHHHHHhcC-CCEEEE---EecCCHHHHHHHHHHHhhcCCC
Confidence 357899999998887 48788888887663 568888887776653 344432 22 356778877763 1 122
Q ss_pred ee--Eeecc-------ccccHH----HHHHHHHHHHHcCCcEEEecC-CCCCCchhHhhh---hhhcccCccccCCCCch
Q 040341 155 AL--LLKVN-------QIGSVT----ESIEAVKMSKRAGWGVMASHR-SGETEDTFIADL---SVGLATGQIKTGAPCRS 217 (251)
Q Consensus 155 ~i--lIK~n-------qiGtlt----e~l~~~~~a~~~g~~~ivs~r-sgEt~d~~iadL---Ava~~~~~ik~G~~~r~ 217 (251)
.+ .++.+ ---|.. .+.+++++|++.|..+.++.. .+.++..++.++ +...++..|-..+..+.
T Consensus 96 ~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~ 175 (293)
T 3ewb_X 96 QIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGY 175 (293)
T ss_dssp EEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSC
T ss_pred EEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC
Confidence 22 22222 112344 445677889999999988764 344566665444 55667777766665443
No 157
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=77.40 E-value=3.5 Score=38.26 Aligned_cols=107 Identities=14% Similarity=0.201 Sum_probs=75.8
Q ss_pred hhHHHHHHHhhhc-CCceeecCCCCcccHHHHHHHHhhh---CCceEEEcccccccCHHHHHHHHhc--cCcceeEeecc
Q 040341 88 DGLKNVYRSFISD-HPIVSIEDPFDQDDWEHHAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIKE--KTCNALLLKVN 161 (251)
Q Consensus 88 ~elid~~~~l~~~-ypI~~IEDP~~e~D~~~~~~l~~~l---g~~~~ivgDdl~vtn~~~i~~~i~~--~a~n~ilIK~n 161 (251)
+.-++...+|.+. -.||-+-=| +++|-++..++.+++ +-.+|+|+|=- .|++.+-++++. ..+..+=|-|+
T Consensus 38 ~aTv~QI~~L~~aG~eiVRvaVp-~~~~A~al~~I~~~l~~~~~~vPLVADiH--F~~~~al~a~~~~a~~~dkiRINPG 114 (406)
T 4g9p_A 38 EATTAQVLELHRAGSEIVRLTVN-DEEAAKAVPEIKRRLLAEGVEVPLVGDFH--FNGHLLLRKYPKMAEALDKFRINPG 114 (406)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECC--SSHHHHHHHCHHHHHHCSEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEecC-CHHHHHhHHHHHHHHHhcCCCCceEeeec--ccHHHHHHHHHHHHhHHhhcccCcc
Confidence 3334445554322 237777666 668888999888873 45899999954 477776654332 25677889999
Q ss_pred cccc----HHHHHHHHHHHHHcCCcEEEecCCCCCCchhH
Q 040341 162 QIGS----VTESIEAVKMSKRAGWGVMASHRSGETEDTFI 197 (251)
Q Consensus 162 qiGt----lte~l~~~~~a~~~g~~~ivs~rsgEt~d~~i 197 (251)
.||. -...-++++.|+++|.++-||-.+|.-++..+
T Consensus 115 Nig~~~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll 154 (406)
T 4g9p_A 115 TLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALL 154 (406)
T ss_dssp SSCSTHHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHH
T ss_pred ccCccccHHHHHHHHHHHHHHccCCceeccccccccHHHH
Confidence 9995 34566889999999999999998887665444
No 158
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=76.43 E-value=9 Score=36.82 Aligned_cols=129 Identities=13% Similarity=0.080 Sum_probs=80.6
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCCC-----------CcccHHHHHHHHhhhCC-ceEEEcc--cc-ccc------CHH
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDPF-----------DQDDWEHHAELTGKIGR-HVQIVGD--DL-LVT------NPK 142 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP~-----------~e~D~~~~~~l~~~lg~-~~~ivgD--dl-~vt------n~~ 142 (251)
.++.+|++.++.. +++.++-+||=.+ .++||+-.+.+.+.+.+ +++..+- .+ -.+ ...
T Consensus 43 ~~~tedKl~Ia~~-L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACAD-IDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHH-HHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHH-HHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHH
Confidence 5788999998887 4888999999765 78999999999876432 3444331 00 000 234
Q ss_pred HHHHHHhccCcce-eEeeccccccHHHHHHHHHHHHHcCCcE--EEecCC-CCCCchhHhhh---hhhcccCccccCCCC
Q 040341 143 RVEKAIKEKTCNA-LLLKVNQIGSVTESIEAVKMSKRAGWGV--MASHRS-GETEDTFIADL---SVGLATGQIKTGAPC 215 (251)
Q Consensus 143 ~i~~~i~~~a~n~-ilIK~nqiGtlte~l~~~~~a~~~g~~~--ivs~rs-gEt~d~~iadL---Ava~~~~~ik~G~~~ 215 (251)
.++.+.+.+.... +..+.|.+ ....++++.|++.|..+ .++... ..++..++.++ ++..++..|...+..
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~ 198 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDP---RNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMA 198 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHHHHhCCCCEEEEEEehhHH---HHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 5566665543221 33455555 56678899999999988 455422 23444555555 455677777655443
Q ss_pred c
Q 040341 216 R 216 (251)
Q Consensus 216 r 216 (251)
+
T Consensus 199 G 199 (539)
T 1rqb_A 199 A 199 (539)
T ss_dssp C
T ss_pred C
Confidence 3
No 159
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=75.28 E-value=12 Score=32.04 Aligned_cols=96 Identities=17% Similarity=0.152 Sum_probs=63.5
Q ss_pred cChhhHHHHHHHhhhcCCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+++.++...|.+- --..+++ ++.+.....+....+++.+ .+||.--| |+.++.++..+...|+--.+++- .-
T Consensus 65 ~~p~~~A~~~~~~--GA~~isvlt~~~~f~G~~~~l~~i~~~v--~lPvl~kd-fI~d~~qi~~a~~~GAD~VlL~~-~~ 138 (254)
T 1vc4_A 65 VDPVEAALAYARG--GARAVSVLTEPHRFGGSLLDLKRVREAV--DLPLLRKD-FVVDPFMLEEARAFGASAALLIV-AL 138 (254)
T ss_dssp CCHHHHHHHHHHT--TCSEEEEECCCSSSCCCHHHHHHHHHHC--CSCEEEES-CCCSHHHHHHHHHTTCSEEEEEH-HH
T ss_pred CCHHHHHHHHHHc--CCCEEEEecchhhhccCHHHHHHHHHhc--CCCEEECC-cCCCHHHHHHHHHcCCCEEEECc-cc
Confidence 4566665555541 1233444 6666667889999999988 55655455 89999999988877655444432 22
Q ss_pred cccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 163 IGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 163 iGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
.. .+.-+.++.++..|+.++|-..
T Consensus 139 l~--~~l~~l~~~a~~lGl~~lvev~ 162 (254)
T 1vc4_A 139 LG--ELTGAYLEEARRLGLEALVEVH 162 (254)
T ss_dssp HG--GGHHHHHHHHHHHTCEEEEEEC
T ss_pred hH--HHHHHHHHHHHHCCCeEEEEEC
Confidence 22 4556677788889999987765
No 160
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=73.52 E-value=7.9 Score=36.38 Aligned_cols=101 Identities=13% Similarity=0.238 Sum_probs=75.5
Q ss_pred ccChhhHHHHHHHhhhcCCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
.+++.+|...|.+- -.-+++ |.+|-...++......+.+ .+||.--| |++.+-.+..+... .+++|+|=..
T Consensus 67 ~~~~~~iA~~y~~~---A~~IsvLTd~~~F~gs~~dL~~vr~~v--~lPvLrKD-FI~d~~Qi~ea~~~-GAD~ILLi~a 139 (452)
T 1pii_A 67 DFDPARIAAIYKHY---ASAISVLTDEKYFQGSFNFLPIVSQIA--PQPILCKD-FIIDPYQIYLARYY-QADACLLMLS 139 (452)
T ss_dssp SCCHHHHHHHHTTT---CSEEEEECCSTTTCCCTTHHHHHHHHC--CSCEEEES-CCCSHHHHHHHHHT-TCSEEEEETT
T ss_pred CCCHHHHHHHHHhh---CcEEEEEecccccCCCHHHHHHHHHhc--CCCeEEEe-ccCCHHHHHHHHHc-CCCEEEEEcc
Confidence 46778887777662 233333 7778778888899998888 78888888 88999888886555 5677777666
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCCCCC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGET 192 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt 192 (251)
... -.+.-+.++.|++.|+.++|-..+.|.
T Consensus 140 ~l~-~~~l~~l~~~a~~lgm~~LvEvh~~eE 169 (452)
T 1pii_A 140 VLD-DDQYRQLAAVAHSLEMGVLTEVSNEEE 169 (452)
T ss_dssp TCC-HHHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred cCC-HHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 543 356777888999999999999865443
No 161
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=72.96 E-value=27 Score=28.27 Aligned_cols=111 Identities=13% Similarity=0.144 Sum_probs=65.1
Q ss_pred cChhhHHHHHHHhhhc-CCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 85 VSGDGLKNVYRSFISD-HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 85 ~s~~elid~~~~l~~~-ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.+.+++.+..+.+.+. ...+.+.++- .+..+...++++.++..+ ++|+. ++.++++++.+.+.++ +.+. +
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~-~~~~~~i~~i~~~~~~~l-~vg~g-~~~~~~~i~~a~~~Ga-d~V~-----~ 86 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS-PQWEQSIPAIVDAYGDKA-LIGAG-TVLKPEQVDALARMGC-QLIV-----T 86 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS-TTHHHHHHHHHHHHTTTS-EEEEE-CCCSHHHHHHHHHTTC-CEEE-----C
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-hhHHHHHHHHHHhCCCCe-EEEec-cccCHHHHHHHHHcCC-CEEE-----e
Confidence 3566777777775443 3455555542 344566667777764344 55665 5678889999888764 4443 2
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
|.. ..+.++.+++.|..++++..+. .. +--|...++.+++.
T Consensus 87 ~~~--~~~~~~~~~~~g~~~~~g~~t~---~e--~~~a~~~G~d~v~v 127 (212)
T 2v82_A 87 PNI--HSEVIRRAVGYGMTVCPGCATA---TE--AFTALEAGAQALKI 127 (212)
T ss_dssp SSC--CHHHHHHHHHTTCEEECEECSH---HH--HHHHHHTTCSEEEE
T ss_pred CCC--CHHHHHHHHHcCCCEEeecCCH---HH--HHHHHHCCCCEEEE
Confidence 221 2345677788888888874321 11 23345556666654
No 162
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=69.79 E-value=25 Score=28.77 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=69.4
Q ss_pred HHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHH
Q 040341 91 KNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 170 (251)
Q Consensus 91 id~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l 170 (251)
..++++-+ .-|++.| |..--|.-.--+..++.+.++-+||-...+...+.+...... -|+.-.+-+..|+-
T Consensus 62 a~~lr~~~-~iPVV~I--~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~------~i~~~~~~~~~e~~ 132 (196)
T 2q5c_A 62 SDYIKKSV-SIPSISI--KVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGV------KIKEFLFSSEDEIT 132 (196)
T ss_dssp HHHHHTTC-SSCEEEE--CCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTC------EEEEEEECSGGGHH
T ss_pred HHHHHHhC-CCCEEEE--cCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCC------ceEEEEeCCHHHHH
Confidence 44555432 2455544 555555444444445567789999988666677777766543 24455566778888
Q ss_pred HHHHHHHHcCCcEEEecCCCCCCchhHhhhh--hhcccCccccC
Q 040341 171 EAVKMSKRAGWGVMASHRSGETEDTFIADLS--VGLATGQIKTG 212 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~rsgEt~d~~iadLA--va~~~~~ik~G 212 (251)
++++.+++.|+.++||. ....++| .|+.+-++.+|
T Consensus 133 ~~i~~l~~~G~~vvVG~-------~~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 133 TLISKVKTENIKIVVSG-------KTVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHHHTTCCEEEEC-------HHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHCCCeEEECC-------HHHHHHHHHcCCcEEEEecC
Confidence 89999999999999997 3557888 44444455444
No 163
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=69.19 E-value=28 Score=25.70 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=48.2
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ...|.++.+.--+...| ++-...+.+. ...++|+ .+. .+.+.+.+++..+.++.++.||-.
T Consensus 35 ~~~~a~~~l~~-~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~---~~~~~~~~~~~~g~~~~~l~KP~~ 109 (151)
T 3kcn_A 35 SGPEALACIKK-SDPFSVIMVDMRMPGMEGTEVIQKARLI-SPNSVYLMLTGN---QDLTTAMEAVNEGQVFRFLNKPCQ 109 (151)
T ss_dssp SHHHHHHHHHH-SCCCSEEEEESCCSSSCHHHHHHHHHHH-CSSCEEEEEECG---GGHHHHHHHHHHTCCSEEEESSCC
T ss_pred CHHHHHHHHHc-CCCCCEEEEeCCCCCCcHHHHHHHHHhc-CCCcEEEEEECC---CCHHHHHHHHHcCCeeEEEcCCCC
Confidence 45666665544 12356777776665544 3333444443 2344443 332 356677788888878899999986
Q ss_pred cccHHHHHHH
Q 040341 163 IGSVTESIEA 172 (251)
Q Consensus 163 iGtlte~l~~ 172 (251)
...+.++++.
T Consensus 110 ~~~L~~~i~~ 119 (151)
T 3kcn_A 110 MSDIKAAINA 119 (151)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6555555543
No 164
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=68.88 E-value=9.9 Score=34.30 Aligned_cols=70 Identities=7% Similarity=0.029 Sum_probs=48.2
Q ss_pred cChhhHHHHHHHhhhcCCceeecC-----------CCCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccC
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIED-----------PFDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 152 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IED-----------P~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a 152 (251)
.+.+|.+.+.+. +++.++-+|+= |..+ .+++.-+.+.+.+ +++|++.- -+++++.+++.++.+.
T Consensus 243 ~~~~~~~~la~~-L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~G-gI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIELARR-FKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTSAW-GFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHH-HHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEECS-STTSHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEEeC-CCCCHHHHHHHHHCCC
Confidence 456677776665 57777655541 1122 3566666777778 67788777 5789999999999998
Q ss_pred cceeEe
Q 040341 153 CNALLL 158 (251)
Q Consensus 153 ~n~ilI 158 (251)
|+.|.+
T Consensus 319 aD~V~i 324 (363)
T 3l5l_A 319 LDLVSV 324 (363)
T ss_dssp CSEEEC
T ss_pred ccEEEe
Confidence 887654
No 165
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=68.85 E-value=62 Score=28.65 Aligned_cols=142 Identities=12% Similarity=0.070 Sum_probs=78.7
Q ss_pred CccChhhHHHHHHHhhhcCCceeecCCCC--c----------ccHHHHHHHHhhhCCceEEE--cccccccCHHHHHHHH
Q 040341 83 QKVSGDGLKNVYRSFISDHPIVSIEDPFD--Q----------DDWEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAI 148 (251)
Q Consensus 83 ~~~s~~elid~~~~l~~~ypI~~IEDP~~--e----------~D~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i 148 (251)
..++.++++.+...| ++-++-+||=.+. . .+|+-++.+.+.-+-+.++. +-..+..+.+++..+.
T Consensus 19 ~~~~~~~k~~ia~~L-~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~ 97 (320)
T 3dxi_A 19 WDFNSKIVDAYILAM-NELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPI 97 (320)
T ss_dssp TCCCHHHHHHHHHHH-HTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGG
T ss_pred CcCCHHHHHHHHHHH-HHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhh
Confidence 578999999988885 8888888886642 1 13777777766322244443 2111112344444333
Q ss_pred hccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecC--CCCCCc-hhHhhhhh-hcccCccccCCCCchhHHHHhh
Q 040341 149 KEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHR--SGETED-TFIADLSV-GLATGQIKTGAPCRSERLAKYN 224 (251)
Q Consensus 149 ~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~r--sgEt~d-~~iadLAv-a~~~~~ik~G~~~r~Er~aKyN 224 (251)
. ...+.+.|- .-.--+.++.++++.|+++|+.+.++-. ++-+.. .++.-++- ..++..|...+..+.-.-...-
T Consensus 98 ~-~Gvd~~ri~-~~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~G~~~i~l~Dt~G~~~P~~~~ 175 (320)
T 3dxi_A 98 I-GLVDMIRIA-IDPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAIDKIADLFCMVDSFGGITPKEVK 175 (320)
T ss_dssp T-TTCSEEEEE-ECGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGGTTTCSEEEEECTTSCCCHHHHH
T ss_pred h-cCCCEEEEE-ecHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHHHHHhhCCCCEEEECcccCCCCHHHHH
Confidence 3 233333332 2223488999999999999999876543 332222 34433321 3456666665554443333333
Q ss_pred HHH
Q 040341 225 QLL 227 (251)
Q Consensus 225 ~ll 227 (251)
+|+
T Consensus 176 ~lv 178 (320)
T 3dxi_A 176 NLL 178 (320)
T ss_dssp HHH
T ss_pred HHH
Confidence 343
No 166
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=68.83 E-value=33 Score=25.37 Aligned_cols=81 Identities=16% Similarity=0.079 Sum_probs=50.0
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+.. ..++|+ ... .+.+.+.+++..+.+..++.||-.
T Consensus 46 ~~~~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~-~~~~ii~~s~~---~~~~~~~~~~~~g~~~~~l~KP~~ 119 (153)
T 3hv2_A 46 DATQALQLLAS--REVDLVISAAHLPQMDGPTLLARIHQQY-PSTTRILLTGD---PDLKLIAKAINEGEIYRYLSKPWD 119 (153)
T ss_dssp SHHHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHC-TTSEEEEECCC---CCHHHHHHHHHTTCCSEEECSSCC
T ss_pred CHHHHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHHHHhHC-CCCeEEEEECC---CCHHHHHHHHhCCCcceEEeCCCC
Confidence 45676665554 3556777766665444 44445555432 334443 322 356778888888878899999987
Q ss_pred cccHHHHHHH
Q 040341 163 IGSVTESIEA 172 (251)
Q Consensus 163 iGtlte~l~~ 172 (251)
...+.++++.
T Consensus 120 ~~~l~~~i~~ 129 (153)
T 3hv2_A 120 DQELLLALRQ 129 (153)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666655543
No 167
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=67.19 E-value=12 Score=31.28 Aligned_cols=93 Identities=10% Similarity=0.038 Sum_probs=55.4
Q ss_pred ceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC--ceeecCC-----CCcccHHHHHHHH
Q 040341 50 KIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP--IVSIEDP-----FDQDDWEHHAELT 122 (251)
Q Consensus 50 kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp--I~~IEDP-----~~e~D~~~~~~l~ 122 (251)
+|.+++|+-- .+ |+|.+... .....+..+.+++.+.+ .+.+ .+.+-|. ....+++..+++.
T Consensus 8 ~iv~~iD~~~----~~--g~~~v~~~-----~~~~~~~~~~~~~a~~~-~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~ 75 (247)
T 3tdn_A 8 AVVVAIDAKR----VD--GEFMVFTY-----SGKKNTGILLRDWVVEV-EKRGAGEILLTSIDRDGTKSGYDTEMIRFVR 75 (247)
T ss_dssp TCEEEEEEEE----ET--TEEEEEET-----TTTEEEEEEHHHHHHHH-HHTTCSEEEEEETTTTTCSSCCCHHHHHHHG
T ss_pred eEEEEEEEEe----cC--CcEEEEEc-----CCeecCCCCHHHHHHHH-HHcCCCEEEEEecCcccCCCcccHHHHHHHH
Confidence 5889999731 13 67866421 11222222444444443 3444 2333222 2345788888888
Q ss_pred hhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 123 ~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+.+ .+||+... .+.++++++++++.+ ++.+.|
T Consensus 76 ~~~--~ipvi~~G-gi~~~~~~~~~l~~G-ad~V~i 107 (247)
T 3tdn_A 76 PLT--TLPIIASG-GAGKMEHFLEAFLRG-ADKVSI 107 (247)
T ss_dssp GGC--CSCEEEES-CCCSHHHHHHHHHTT-CSEECC
T ss_pred HhC--CCCEEEeC-CCCCHHHHHHHHHcC-CCeeeh
Confidence 887 67777666 688999999999887 666554
No 168
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=67.06 E-value=26 Score=25.87 Aligned_cols=82 Identities=10% Similarity=0.037 Sum_probs=47.2
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEE--EcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.-.+...| ++-...+.+. ...++| +.+. .+...+.+++..+.++.++.||-.
T Consensus 39 ~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~---~~~~~~~~~~~~g~~~~~l~kP~~ 112 (154)
T 2rjn_A 39 SPLDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKS-YPDIERVVISGY---ADAQATIDAVNRGKISRFLLKPWE 112 (154)
T ss_dssp CHHHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHH-CTTSEEEEEECG---GGHHHHHHHHHTTCCSEEEESSCC
T ss_pred CHHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHh-CCCCcEEEEecC---CCHHHHHHHHhccchheeeeCCCC
Confidence 34565554433 3455777766665433 3334444443 223443 3332 246677788888778899999977
Q ss_pred cccHHHHHHHH
Q 040341 163 IGSVTESIEAV 173 (251)
Q Consensus 163 iGtlte~l~~~ 173 (251)
...+.++++.+
T Consensus 113 ~~~L~~~i~~~ 123 (154)
T 2rjn_A 113 DEDVFKVVEKG 123 (154)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666655443
No 169
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=66.27 E-value=34 Score=29.71 Aligned_cols=110 Identities=16% Similarity=0.167 Sum_probs=64.8
Q ss_pred ccChhhHHHHHHHhhhcCC--ceee---cCCCCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeE
Q 040341 84 KVSGDGLKNVYRSFISDHP--IVSI---EDPFDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 157 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~yp--I~~I---EDP~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~il 157 (251)
.+|.+++++....+ .+++ -+.| |+|+.. +++...-+..++. .+.|...- ...+++.+++..+.+ ++.+.
T Consensus 83 ~ls~eei~~~i~~~-~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~~~i~~s~-g~l~~e~l~~L~~ag-~~~v~ 157 (348)
T 3iix_A 83 RMTPEEIVERARLA-VQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM--GVAVTLSL-GEWPREYYEKWKEAG-ADRYL 157 (348)
T ss_dssp BCCHHHHHHHHHHH-HHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT--SCEEEEEC-CCCCHHHHHHHHHHT-CCEEE
T ss_pred eCCHHHHHHHHHHH-HHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc--CceEEEec-CCCCHHHHHHHHHhC-CCEEe
Confidence 46899998888775 3433 2233 678765 4444433333333 34444221 224677777766544 34444
Q ss_pred ee-----------ccccccHHHHHHHHHHHHHcCCcEEEecC---CCCCCchhHh
Q 040341 158 LK-----------VNQIGSVTESIEAVKMSKRAGWGVMASHR---SGETEDTFIA 198 (251)
Q Consensus 158 IK-----------~nqiGtlte~l~~~~~a~~~g~~~ivs~r---sgEt~d~~ia 198 (251)
+- ++..++..+.+++++.+++.|+.+.++-. .+||.++...
T Consensus 158 i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~ 212 (348)
T 3iix_A 158 LRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVD 212 (348)
T ss_dssp CCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHH
T ss_pred eeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHH
Confidence 32 23446999999999999999998743321 2677665553
No 170
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=65.30 E-value=55 Score=30.66 Aligned_cols=129 Identities=15% Similarity=0.094 Sum_probs=79.0
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCCC-----------CcccHHHHHHHHhhhCC-ceEEEcccc---ccc------CHH
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDPF-----------DQDDWEHHAELTGKIGR-HVQIVGDDL---LVT------NPK 142 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP~-----------~e~D~~~~~~l~~~lg~-~~~ivgDdl---~vt------n~~ 142 (251)
.++.+|++.+... +++.++-+||=.+ .++||+..+.+.+.+.+ +++....-. -.+ ...
T Consensus 26 ~~~~~dkl~Ia~~-L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQ-LDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHH-HHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHH-HHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHH
Confidence 5788999998877 5888999999864 78999999999876532 333332100 000 133
Q ss_pred HHHHHHhccCcce-eEeeccccccHHHHHHHHHHHHHcCCcEEEec---CCCCCCchhHhhh---hhhcccCccccCCCC
Q 040341 143 RVEKAIKEKTCNA-LLLKVNQIGSVTESIEAVKMSKRAGWGVMASH---RSGETEDTFIADL---SVGLATGQIKTGAPC 215 (251)
Q Consensus 143 ~i~~~i~~~a~n~-ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~---rsgEt~d~~iadL---Ava~~~~~ik~G~~~ 215 (251)
.++.+.+.+.-.. +..+.|.+ ....++++.|+++|..+.+.- .+..++..++.++ ++..++..|-..+..
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~ 181 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDV---RNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMA 181 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHHHHhCCcCEEEEEEecCHH---HHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 4566665543221 33455655 556778889999999884332 1223344555555 455677776654433
Q ss_pred c
Q 040341 216 R 216 (251)
Q Consensus 216 r 216 (251)
+
T Consensus 182 G 182 (464)
T 2nx9_A 182 G 182 (464)
T ss_dssp S
T ss_pred C
Confidence 3
No 171
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=63.99 E-value=72 Score=27.57 Aligned_cols=180 Identities=12% Similarity=0.123 Sum_probs=98.8
Q ss_pred cccCCCCCcHHHH-HHHHHHHHhcCCcc-ceee--eeehhhhccc----------ccCCcceeecCCCCCCCCCCccChh
Q 040341 23 GFAPNIQESYEGF-ELLKTAIAKGGYIG-KIVI--GMDVAASEFY----------DSKDKTYDLNFKEENNDGSQKVSGD 88 (251)
Q Consensus 23 Gfap~~~~~eeal-~~i~~Ai~~aGy~~-kI~i--glD~Aase~~----------~~~~g~Y~l~~~~~~~d~~~~~s~~ 88 (251)
.|.-++...+++. +.+++|+ +.|.++ .|.- .+-.+ ..+| .. |++.+... .-.....+
T Consensus 37 ~~~lp~~~~~~~~~~~~~~al-~~g~~p~~ii~~~~L~~g-g~~~~V~~p~l~~Vg~--g~i~v~qe-----h~s~~~~~ 107 (262)
T 1xrs_B 37 SFTLPLKNNERSAEAAKQIAL-KMGLEEPSVVMQQSLDEE-FTFFVVYGNFVQSVNY--NEIHVEAV-----NSEILSME 107 (262)
T ss_dssp EEEESSCSSHHHHHHHHHHHH-TTSSCCCEEEEEEEEETT-EEEEEEEEC------------------------CCCCHH
T ss_pred EEEecCCCChHHHHHHHHHHH-HcCCChHHHHcccccCCC-ceEEEEeeeceeecCC--CeEEchHH-----HHHHHHHH
Confidence 4666666645554 4555555 789886 5554 34334 5555 32 55554311 01233456
Q ss_pred hHHHHHHHhhhcCC-ceeecCCCCcccHHHHHHH----------Hhhh-CCceEEEcccccccCHHHHHHHHhccCccee
Q 040341 89 GLKNVYRSFISDHP-IVSIEDPFDQDDWEHHAEL----------TGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNAL 156 (251)
Q Consensus 89 elid~~~~l~~~yp-I~~IEDP~~e~D~~~~~~l----------~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~i 156 (251)
+++.++...+.+-+ |+.-==|-+..|+-..--. -+.- |-++.-.|-+ ..++.+..++.+..+++|
T Consensus 108 ~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~---vp~e~iv~aa~e~~~d~V 184 (262)
T 1xrs_B 108 ETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ---VANEDFIKKAVELEADVL 184 (262)
T ss_dssp HHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS---BCHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCC---CCHHHHHHHHHHcCCCEE
Confidence 66666655444333 4333334456675543221 1222 4344345665 357777777777788999
Q ss_pred Eeeccccc---cHHHHHHHHHHHHHcC----CcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHH
Q 040341 157 LLKVNQIG---SVTESIEAVKMSKRAG----WGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLA 221 (251)
Q Consensus 157 lIK~nqiG---tlte~l~~~~~a~~~g----~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~a 221 (251)
.+..--.. ++...-+.++..++.| +.+|||...- + .++|.-+++......+. ....++
T Consensus 185 glS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~-~-----~~~a~~iGad~~~~da~-~~~~~a 249 (262)
T 1xrs_B 185 LVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRI-N-----NEIAKELGYDAGFGPGR-FADDVA 249 (262)
T ss_dssp EEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTC-C-----HHHHHTTTCSEEECTTC-CHHHHH
T ss_pred EEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECCcC-C-----HHHHHHcCCeEEECCch-HHHHHH
Confidence 98866555 7888888999998888 6789998732 2 45666667655544433 344443
No 172
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=63.22 E-value=16 Score=28.70 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=40.9
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+-++|=.++-|.-.+++++++.|++.|..++.=....++.-...+|..+-+.+
T Consensus 96 ~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~~ 149 (183)
T 2xhz_A 96 PQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKV 149 (183)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECCC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeCC
Confidence 345666678889999999999999999998876665566655666776655544
No 173
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=62.77 E-value=4.5 Score=32.70 Aligned_cols=53 Identities=13% Similarity=0.197 Sum_probs=40.6
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+-++|=.++-|.-.+++++++.|++.|..++.=....++.-...+|..+-+.+
T Consensus 93 ~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~ 145 (201)
T 3fxa_A 93 EDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSV 145 (201)
T ss_dssp TCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcCC
Confidence 34556678889999999999999999999877666666666666777665544
No 174
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=62.30 E-value=91 Score=28.20 Aligned_cols=137 Identities=14% Similarity=0.086 Sum_probs=87.1
Q ss_pred CCCCcHHHHHHHHHHHHhcCCc--cceeeeeehhhhcccccCCcceeecCCCCC--CCCCCccChhhHHHHHHHh---hh
Q 040341 27 NIQESYEGFELLKTAIAKGGYI--GKIVIGMDVAASEFYDSKDKTYDLNFKEEN--NDGSQKVSGDGLKNVYRSF---IS 99 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~--~kI~iglD~Aase~~~~~~g~Y~l~~~~~~--~d~~~~~s~~elid~~~~l---~~ 99 (251)
.+.+.+.+++.... +++.+-+ .++.+-+-+- |++..+..| |+++. ++.+.++.-++=+..++++ +.
T Consensus 62 sie~~e~aleyA~~-L~~~~~~l~d~l~ivmR~y---feKPRTs~g---~kGl~~dP~ld~s~~i~~GL~ilr~ll~~~~ 134 (350)
T 1n8f_A 62 SIHDPVAAKEYATR-LLALREELKDELEIVMRVY---FEKPRTTVG---WKGLINDPHMDNSFQINDGLRIARKLLLDIN 134 (350)
T ss_dssp SCCCHHHHHHHHHH-HHHHHHHTTTTEEEEEECC---CCCCCSSSS---CCCTTTCTTSSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHH-HHHHHHhhccCeEEEEEec---cccCcCCcC---cCCCCCCCCccccccHHHHHHHHHHHHHHHH
Confidence 57888999887766 4455433 2455555442 333322233 44332 3345677777878888888 78
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHH
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~ 178 (251)
++++-.+-+=++..+.+- +..-+ .+--+|=- ++.|...++.+- +..-.|++|=++-|++.+++.++.-|++
T Consensus 135 e~GlPv~TEvld~~~~~~---vad~v--d~~qIGAR-~~esq~hr~~as--g~~~PVg~Kngt~g~i~~~l~Ai~aa~~ 205 (350)
T 1n8f_A 135 DSGLPAAGEFLDMITPQY---LADLM--SWGAIGAR-TTESQVHRELAS--GLSCPVGFKNGTDGTIKVAIDAINAAGA 205 (350)
T ss_dssp HTTCCEEEECCCSSTHHH---HGGGC--SEEEECTT-TTTCHHHHHHHH--TCSSCEEEECCTTCCSHHHHHHHHHHTS
T ss_pred HhCCceEEeecCcccHHH---HhhcC--cEEEECCc-cccCHHHHHHHh--cCCCeEEEecCCCCCHHHHHHHHHHHhC
Confidence 886554444444455433 33444 45566665 577776666554 4567899999999999999999776654
No 175
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=61.44 E-value=67 Score=26.38 Aligned_cols=40 Identities=13% Similarity=0.220 Sum_probs=30.0
Q ss_pred HHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee
Q 040341 116 EHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 159 (251)
Q Consensus 116 ~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK 159 (251)
+..+++.+.. .+|+.... .++++++++.+++.+ ++.+.|-
T Consensus 65 ~~i~~i~~~~--~ipv~v~g-gI~~~~~~~~~l~~G-ad~V~lg 104 (244)
T 1vzw_A 65 ALIAEVAQAM--DIKVELSG-GIRDDDTLAAALATG-CTRVNLG 104 (244)
T ss_dssp HHHHHHHHHC--SSEEEEES-SCCSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHhc--CCcEEEEC-CcCCHHHHHHHHHcC-CCEEEEC
Confidence 5567777777 56776665 688999999999887 6776653
No 176
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=58.69 E-value=39 Score=30.63 Aligned_cols=68 Identities=10% Similarity=0.020 Sum_probs=46.8
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCc-----ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQ-----DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e-----~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
.+.++.+.+.+. ++++++-+|+-+-.. -..+ .+.+.+.+ +++|++..- + +++..++.++.+.|+.|.+
T Consensus 263 ~~~~~~~~la~~-l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~--~iPvi~~G~-i-t~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 263 NPEALTKHLCKK-IEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSY--SGVKISNLR-Y-DFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp CHHHHHHHHHHH-HGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTC--CSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHHHHH-HHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHC--CCcEEEECC-C-CHHHHHHHHHcCCCeEEEe
Confidence 466677676665 688887777654310 0114 66778887 567776663 4 7999999999998988765
No 177
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=58.35 E-value=54 Score=24.33 Aligned_cols=81 Identities=11% Similarity=0.174 Sum_probs=47.4
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCC--ceEEEcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGR--HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~--~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+.-..+.++.+.--+...| ++-...+.+. .. ++.++.+. .+.+.+.++.+.+ ++.++.||-.
T Consensus 69 ~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~-~~~~~ii~ls~~---~~~~~~~~~~~~g-~~~~l~KP~~ 143 (157)
T 3hzh_A 69 DGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEF-DKNARVIMISAL---GKEQLVKDCLIKG-AKTFIVKPLD 143 (157)
T ss_dssp SHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHH-CTTCCEEEEESC---CCHHHHHHHHHTT-CSEEEESSCC
T ss_pred CHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhh-CCCCcEEEEecc---CcHHHHHHHHHcC-CCEEEeCCCC
Confidence 56677776665212566887776665544 3333444433 23 33333332 3577778888876 6778999976
Q ss_pred cccHHHHHH
Q 040341 163 IGSVTESIE 171 (251)
Q Consensus 163 iGtlte~l~ 171 (251)
...+.++++
T Consensus 144 ~~~l~~~i~ 152 (157)
T 3hzh_A 144 RAKVLQRVM 152 (157)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 178
>3nft_A Translocator protein BIPD; virulence, translocation, transport protein; 1.51A {Burkholderia pseudomallei} PDB: 2ixr_A 2j9t_A* 2izp_A
Probab=57.57 E-value=12 Score=33.14 Aligned_cols=120 Identities=21% Similarity=0.361 Sum_probs=59.8
Q ss_pred hcCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHhcCCcc---c-eeeeeehhhhccccc------CCcceeecCCCCCC
Q 040341 10 KYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIG---K-IVIGMDVAASEFYDS------KDKTYDLNFKEENN 79 (251)
Q Consensus 10 ~~g~~~~~vgdeGGfap~~~~~eeal~~i~~Ai~~aGy~~---k-I~iglD~Aase~~~~------~~g~Y~l~~~~~~~ 79 (251)
..|+.--..|++||..|.- ...+..++|.. ++ .|.. + |+ ...+||.+ .=..|--. .
T Consensus 103 ~~~~~~~~~~~~~~~~~~p-~~~~L~d~I~n-gk--dYlDvYa~IVk-----~YTdyyQdfNe~LSKlSd~IsA-----k 168 (303)
T 3nft_A 103 LLGGTLDTAGDEGGIQPDP-ILQGLVDVIGQ-GK--SDIDAYATIVE-----GLTKYFQSVADVMSKLQDYISA-----K 168 (303)
T ss_dssp HCCC---------CCCCCH-HHHHHHHHHHH-HH--HHHHHHHHHHH-----HHHHHHHHHHHHHHHGGGGEEE-----E
T ss_pred HhcCcccccCCCCCCCCCh-HHHHHHHHHhc-cH--HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhhccc-----c
Confidence 4466666789999999852 23333333333 21 1542 1 22 23334332 00123211 2
Q ss_pred CCC-CccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHh
Q 040341 80 DGS-QKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIK 149 (251)
Q Consensus 80 d~~-~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~ 149 (251)
|.| ..+..+.|..-|.+++++|+- +..| .+++.+.|.+ +||....+-+|-...-|+.-+.....
T Consensus 169 DGN~IKFD~~sfk~~l~~l~~kY~~--v~~P-sd~ea~~W~k---~Lg~~f~V~~sG~I~~Dl~~i~~m~~ 233 (303)
T 3nft_A 169 DDKNMKIDGGKIKALIQQVIDHLPT--MQLP-KGADIARWRK---ELGDAVSISDSGVVTINPDKLIKMRD 233 (303)
T ss_dssp TTTEEEECHHHHHHHHHHHHHTCCE--EECC-TTCCHHHHHH---HHCTTEEECTTCEEEECCHHHHHHHH
T ss_pred CCCeeeecHHHHHHHHHHHHHhcCC--CCCC-CHHHHHHHHH---HhCCCceeCCCceEEeCcHHHHHHHh
Confidence 344 577888999999999999994 4447 6678888875 77766555444422235555554443
No 179
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=56.87 E-value=44 Score=29.01 Aligned_cols=96 Identities=13% Similarity=0.197 Sum_probs=70.4
Q ss_pred cChhhHHHHHHHhhhcCC-ceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 85 VSGDGLKNVYRSFISDHP-IVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 85 ~s~~elid~~~~l~~~yp-I~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
.++.++..+|. .+- -+|+ |.+|-.-.++......+.+ .+||.--| |+.++-+|..+-..| +++|||=..
T Consensus 64 ~dp~~iA~~~~----~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v--~lPvLrKD-Fiid~yQI~eAr~~G-ADaILLI~a 135 (258)
T 4a29_A 64 RDPIEYAKFME----RYAVGLSITTEEKYFNGSYETLRKIASSV--SIPILMSD-FIVKESQIDDAYNLG-ADTVLLIVK 135 (258)
T ss_dssp CCHHHHHHHHT----TTCSEEEEECCSTTTCCCHHHHHHHHTTC--SSCEEEES-CCCSHHHHHHHHHHT-CSEEEEEGG
T ss_pred CCHHHHHHHHh----CCCeEEEEeCCCCCCCCCHHHHHHHHHhc--CCCEeecc-ccccHHHHHHHHHcC-CCeeehHHh
Confidence 45777766553 222 3344 7788889999999998888 78888888 788999998877665 566665443
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
-. +-.+..+..++|++.|+.++|-..+
T Consensus 136 ~L-~~~~l~~l~~~A~~lGl~~LvEVh~ 162 (258)
T 4a29_A 136 IL-TERELESLLEYARSYGMEPLILIND 162 (258)
T ss_dssp GS-CHHHHHHHHHHHHHTTCCCEEEESS
T ss_pred hc-CHHHHHHHHHHHHHHhHHHHHhcch
Confidence 33 3456778899999999999987754
No 180
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=56.72 E-value=36 Score=28.58 Aligned_cols=113 Identities=11% Similarity=0.026 Sum_probs=61.1
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEc---cc-----cccc-CHHHHHHHHhccCcc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG---DD-----LLVT-NPKRVEKAIKEKTCN 154 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg---Dd-----l~vt-n~~~i~~~i~~~a~n 154 (251)
.+++.++.++-+. ..+-+...|+= ...+...++.+.+ .+||+| +| .+++ +.+++..+.+.|+-
T Consensus 32 l~~~~~~~~~A~a-~~~~Ga~~i~~----~~~~~i~~ir~~v--~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad- 103 (232)
T 3igs_A 32 LDKPEIVAAMALA-AEQAGAVAVRI----EGIDNLRMTRSLV--SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAA- 103 (232)
T ss_dssp TCSHHHHHHHHHH-HHHTTCSEEEE----ESHHHHHHHHTTC--CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS-
T ss_pred CCCcchHHHHHHH-HHHCCCeEEEE----CCHHHHHHHHHhc--CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCC-
Confidence 3455566555444 45556444442 3456677777777 567774 11 4555 45678777777654
Q ss_pred eeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 155 ALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 155 ~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
.+++=..........-+.++.+++.|+.++++..+.|- +.-|...++.+|
T Consensus 104 ~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~ee-----a~~a~~~Gad~I 153 (232)
T 3igs_A 104 IIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDD-----GLACQRLGADII 153 (232)
T ss_dssp EEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHH-----HHHHHHTTCSEE
T ss_pred EEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHH-----HHHHHhCCCCEE
Confidence 44432221111123344556666778888877653222 444555556555
No 181
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=56.32 E-value=88 Score=27.70 Aligned_cols=70 Identities=6% Similarity=0.099 Sum_probs=45.2
Q ss_pred cChhhHHHHHHHhhhcCCceeec--CC--------CCc-ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIE--DP--------FDQ-DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTC 153 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IE--DP--------~~e-~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~ 153 (251)
.+.++.+++.+. +++.++-+|+ .+ ..+ -+++--+++.+.+ +++|++-- -++++++++++++.+.|
T Consensus 226 ~~~~~~~~la~~-L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~G-gI~s~e~a~~~L~~G~a 301 (340)
T 3gr7_A 226 LTAKDYVPYAKR-MKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVG-LITSGWQAEEILQNGRA 301 (340)
T ss_dssp CCGGGHHHHHHH-HHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEES-SCCCHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeC-CCCCHHHHHHHHHCCCe
Confidence 456677776665 4666644332 21 112 2556556777777 46666554 46899999999999988
Q ss_pred ceeEe
Q 040341 154 NALLL 158 (251)
Q Consensus 154 n~ilI 158 (251)
+.|.+
T Consensus 302 D~V~i 306 (340)
T 3gr7_A 302 DLVFL 306 (340)
T ss_dssp SEEEE
T ss_pred eEEEe
Confidence 87765
No 182
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=56.20 E-value=41 Score=28.21 Aligned_cols=113 Identities=11% Similarity=0.054 Sum_probs=55.7
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEc---cc-----cccc-CHHHHHHHHhccCcc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG---DD-----LLVT-NPKRVEKAIKEKTCN 154 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg---Dd-----l~vt-n~~~i~~~i~~~a~n 154 (251)
.+++.++.++-+. ..+-+...|+= ...+...++.+.+ .+||+| +| .+++ +.+++..+.+.|+-
T Consensus 32 l~~~~~~~~~A~a-~~~~Ga~~i~~----~~~~~i~~ir~~v--~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad- 103 (229)
T 3q58_A 32 MDKPEIVAAMAQA-AASAGAVAVRI----EGIENLRTVRPHL--SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGAD- 103 (229)
T ss_dssp TCSHHHHHHHHHH-HHHTTCSEEEE----ESHHHHHHHGGGC--CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS-
T ss_pred CCCcchHHHHHHH-HHHCCCcEEEE----CCHHHHHHHHHhc--CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCC-
Confidence 3455555554444 34445443331 2455566666666 566653 22 4555 35677777666544
Q ss_pred eeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcc
Q 040341 155 ALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 209 (251)
Q Consensus 155 ~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~i 209 (251)
.+++=..........-+.++.+++.|+.++++..+.|- +.-|...++.+|
T Consensus 104 ~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~ee-----a~~a~~~Gad~I 153 (229)
T 3q58_A 104 IIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNE-----GISCHQKGIEFI 153 (229)
T ss_dssp EEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHH-----HHHHHHTTCSEE
T ss_pred EEEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHH-----HHHHHhCCCCEE
Confidence 44432211111122334455556667777776543221 344455555555
No 183
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=55.34 E-value=58 Score=23.79 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=45.7
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEE--EcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+. ...++| +.+. .+.+.+.++++.+ +..++.||-.
T Consensus 54 ~~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~---~~~~~~~~~~~~g-~~~~l~Kp~~ 126 (150)
T 4e7p_A 54 NGQEAIQLLEK--ESVDIAILDVEMPVKTGLEVLEWIRSE-KLETKVVVVTTF---KRAGYFERAVKAG-VDAYVLKERS 126 (150)
T ss_dssp SHHHHHHHHTT--SCCSEEEECSSCSSSCHHHHHHHHHHT-TCSCEEEEEESC---CCHHHHHHHHHTT-CSEEEETTSC
T ss_pred CHHHHHHHhhc--cCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEeCC---CCHHHHHHHHHCC-CcEEEecCCC
Confidence 55666554433 3455777766665544 3334444443 233444 3332 3567778888776 5788999985
Q ss_pred cccHHHHHHHHHHHH
Q 040341 163 IGSVTESIEAVKMSK 177 (251)
Q Consensus 163 iGtlte~l~~~~~a~ 177 (251)
.. +.+++++.+.
T Consensus 127 ~~---~l~~~i~~~~ 138 (150)
T 4e7p_A 127 IA---DLMQTLHTVL 138 (150)
T ss_dssp HH---HHHHHHHHHH
T ss_pred HH---HHHHHHHHHH
Confidence 44 4444444443
No 184
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=55.26 E-value=55 Score=23.51 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=46.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccH-HHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDW-EHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~-~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+...-..+.++.+.--+...|- +-...+.+. ...++|+ .+. .+.+.+.++++.+ +..++.||-.
T Consensus 35 ~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~---~~~~~~~~~~~~g-~~~~l~kp~~ 109 (143)
T 3jte_A 35 SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKI-TPHMAVIILTGH---GDLDNAILAMKEG-AFEYLRKPVT 109 (143)
T ss_dssp SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHH-CTTCEEEEEECT---TCHHHHHHHHHTT-CSEEEESSCC
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEECC---CCHHHHHHHHHhC-cceeEeCCCC
Confidence 445655555431134557777666655443 333444443 3334443 332 3567777888776 6778999976
Q ss_pred cccHHHHHHHH
Q 040341 163 IGSVTESIEAV 173 (251)
Q Consensus 163 iGtlte~l~~~ 173 (251)
...+.++++.+
T Consensus 110 ~~~l~~~l~~~ 120 (143)
T 3jte_A 110 AQDLSIAINNA 120 (143)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666555443
No 185
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=55.09 E-value=59 Score=23.77 Aligned_cols=78 Identities=12% Similarity=0.181 Sum_probs=45.3
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccH-HHHHHHHhhhCCceEE--EcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDW-EHHAELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~-~~~~~l~~~lg~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...|- +-...+.+. ...++| +.+. .+.+.+.++++.+ ++.++.||-.
T Consensus 49 ~~~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~---~~~~~~~~~~~~g-~~~~l~Kp~~ 121 (152)
T 3eul_A 49 DGAAALELIKA--HLPDVALLDYRMPGMDGAQVAAAVRSY-ELPTRVLLISAH---DEPAIVYQALQQG-AAGFLLKDST 121 (152)
T ss_dssp SHHHHHHHHHH--HCCSEEEEETTCSSSCHHHHHHHHHHT-TCSCEEEEEESC---CCHHHHHHHHHTT-CSEEEETTCC
T ss_pred CHHHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCeEEEEEcc---CCHHHHHHHHHcC-CCEEEecCCC
Confidence 55676666554 45668777766655443 333344433 334444 3333 3567777888776 5678999976
Q ss_pred cccHHHHH
Q 040341 163 IGSVTESI 170 (251)
Q Consensus 163 iGtlte~l 170 (251)
...+.+++
T Consensus 122 ~~~l~~~i 129 (152)
T 3eul_A 122 RTEIVKAV 129 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54444443
No 186
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=55.06 E-value=51 Score=23.34 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=42.4
Q ss_pred hhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 87 GDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.++.++.+.+ ..+.++.+.-.+...| ++-...+.+.. ..++|+ .+. .+.+...++.+.+ +..++.||-..
T Consensus 35 ~~~a~~~~~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~-~~~~ii~~s~~---~~~~~~~~~~~~g-~~~~l~kp~~~ 107 (134)
T 3f6c_A 35 GGSAVQRVET--LKPDIVIIDVDIPGVNGIQVLETLRKRQ-YSGIIIIVSAK---NDHFYGKHCADAG-ANGFVSKKEGM 107 (134)
T ss_dssp STTHHHHHHH--HCCSEEEEETTCSSSCHHHHHHHHHHTT-CCSEEEEEECC------CTHHHHHHTT-CSEEEEGGGCT
T ss_pred HHHHHHHHHh--cCCCEEEEecCCCCCChHHHHHHHHhcC-CCCeEEEEeCC---CChHHHHHHHHhC-CCEEEeCCCCH
Confidence 4465565554 4566887776666555 34444454442 334443 332 2334556677665 67789999765
Q ss_pred ccHHHHHH
Q 040341 164 GSVTESIE 171 (251)
Q Consensus 164 Gtlte~l~ 171 (251)
..+.++++
T Consensus 108 ~~l~~~i~ 115 (134)
T 3f6c_A 108 NNIIAAIE 115 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54444443
No 187
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=54.50 E-value=60 Score=23.71 Aligned_cols=69 Identities=10% Similarity=0.138 Sum_probs=38.9
Q ss_pred CCceeecCCCCccc-HHHHHHHHhh-hCC--ceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHH
Q 040341 101 HPIVSIEDPFDQDD-WEHHAELTGK-IGR--HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAV 173 (251)
Q Consensus 101 ypI~~IEDP~~e~D-~~~~~~l~~~-lg~--~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~ 173 (251)
+.++.+.--+...| ++-...+.+. ... ++.++... .+.+.+.++.+.+ ++.++.||-....+.++++.+
T Consensus 60 ~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~---~~~~~~~~~~~~g-~~~~l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 60 AQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTT---DDQREIQRCYDLG-ANVYITKPVNYENFANAIRQL 132 (152)
T ss_dssp BEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESC---CCHHHHHHHHHTT-CSEEEECCSSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecC---CCHHHHHHHHHCC-CcEEEeCCCCHHHHHHHHHHH
Confidence 44666655554433 3333344431 112 34344332 3566777788776 678999998776666666555
No 188
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=54.36 E-value=38 Score=28.47 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=32.2
Q ss_pred cceeEeeccccc-cHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHh
Q 040341 153 CNALLLKVNQIG-SVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198 (251)
Q Consensus 153 ~n~ilIK~nqiG-tlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~ia 198 (251)
++.+.+.+-+.- ++.+++++++.++++|..+.|+-. ..|....+-
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvaln-p~tp~~~~~ 131 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIK-PKTDVQKLV 131 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEEC-TTSCGGGGH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeC-CCCcHHHHH
Confidence 666677776655 777777777788999999998874 455554444
No 189
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=53.43 E-value=58 Score=23.19 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=48.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccH-HHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDW-EHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~-~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...|- +-...+.+. ...++|+ .+. .+.+.+.++.+.+ ++.++.||-.
T Consensus 39 ~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~---~~~~~~~~~~~~g-~~~~l~kP~~ 111 (137)
T 3hdg_A 39 DGEEGERLFGL--HAPDVIITDIRMPKLGGLEMLDRIKAG-GAKPYVIVISAF---SEMKYFIKAIELG-VHLFLPKPIE 111 (137)
T ss_dssp SHHHHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHT-TCCCEEEECCCC---CCHHHHHHHHHHC-CSEECCSSCC
T ss_pred CHHHHHHHHhc--cCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCcEEEEecC---cChHHHHHHHhCC-cceeEcCCCC
Confidence 45676666554 45668877766665443 333344443 3344443 232 3566777777776 5678999987
Q ss_pred cccHHHHHHHHH
Q 040341 163 IGSVTESIEAVK 174 (251)
Q Consensus 163 iGtlte~l~~~~ 174 (251)
...+.++++.+.
T Consensus 112 ~~~l~~~i~~~~ 123 (137)
T 3hdg_A 112 PGRLMETLEDFR 123 (137)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 766666665544
No 190
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=52.86 E-value=24 Score=29.33 Aligned_cols=110 Identities=8% Similarity=0.080 Sum_probs=69.0
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.+.+++++..+.++ +.++-.||=.+...+ .+..+++.+++++ . ++|=.. +.+.++++.+++.++- .+. -| |
T Consensus 25 ~~~~~~~~~~~al~-~gGv~~iel~~k~~~~~~~i~~l~~~~~~-~-~vgagt-vi~~d~~~~A~~aGAd-~v~-~p-~- 96 (214)
T 1wbh_A 25 KKLEHAVPMAKALV-AGGVRVLNVTLRTECAVDAIRAIAKEVPE-A-IVGAGT-VLNPQQLAEVTEAGAQ-FAI-SP-G- 96 (214)
T ss_dssp SSGGGHHHHHHHHH-HTTCCEEEEESCSTTHHHHHHHHHHHCTT-S-EEEEES-CCSHHHHHHHHHHTCS-CEE-ES-S-
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEeCCChhHHHHHHHHHHHCcC-C-EEeeCE-EEEHHHHHHHHHcCCC-EEE-cC-C-
Confidence 46677778777754 446666665554333 4455667788753 3 334443 5677999999988754 333 23 2
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
...++++.|+..|..+++|..+ ..=+--|...++.++|.
T Consensus 97 ----~d~~v~~~~~~~g~~~i~G~~t-----~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 97 ----LTEPLLKAATEGTIPLIPGIST-----VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp ----CCHHHHHHHHHSSSCEEEEESS-----HHHHHHHHHTTCCEEEE
T ss_pred ----CCHHHHHHHHHhCCCEEEecCC-----HHHHHHHHHCCCCEEEE
Confidence 2356778888899999988653 11134456667777776
No 191
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=52.83 E-value=1.1e+02 Score=27.37 Aligned_cols=117 Identities=9% Similarity=0.122 Sum_probs=64.0
Q ss_pred HHHHHHhhh---cCCceeecCCCC--cccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEeecc---
Q 040341 91 KNVYRSFIS---DHPIVSIEDPFD--QDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKVN--- 161 (251)
Q Consensus 91 id~~~~l~~---~ypI~~IEDP~~--e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~n--- 161 (251)
.+....+++ ..+++.|.-.+. ..-|+..+++.+..+ .++|+ |+ |++++.++++++.+ +++|.+-.+
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~-~~~vi~g~---v~t~e~A~~a~~aG-aD~I~v~~g~G~ 194 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFP-QHTIMAGN---VVTGEMVEELILSG-ADIIKVGIGPGS 194 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCT-TSEEEEEE---ECSHHHHHHHHHTT-CSEEEECSSCST
T ss_pred HHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcC-CCeEEEEe---CCCHHHHHHHHHhC-CCEEEECCCCCc
Confidence 355666666 356555532221 222445555666653 34544 53 67899999998886 566655211
Q ss_pred ----------ccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCC
Q 040341 162 ----------QIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 215 (251)
Q Consensus 162 ----------qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~ 215 (251)
.+.+++-..++.+.++..+++++.+..- .|..+.. =|+++|+..+-.|.+.
T Consensus 195 ~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI-~~g~di~--kAlalGA~~V~vG~~f 255 (351)
T 2c6q_A 195 VCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGC-SCPGDVA--KAFGAGADFVMLGGML 255 (351)
T ss_dssp TBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCC-CSHHHHH--HHHHTTCSEEEESTTT
T ss_pred CcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCC-CCHHHHH--HHHHcCCCceeccHHH
Confidence 1223444456666667778988886542 2222322 3444556666666553
No 192
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=52.72 E-value=56 Score=27.27 Aligned_cols=110 Identities=9% Similarity=0.135 Sum_probs=67.5
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.+.+++++..+.++ +.++-.||=++...+ .+..+++.+++++ + ++|=+. +.+.++++.+++.++ +.+ +-| |
T Consensus 26 ~~~~~~~~~~~al~-~gGv~~iel~~k~~~~~~~i~~l~~~~~~-l-~vgaGt-vl~~d~~~~A~~aGA-d~v-~~p-~- 97 (224)
T 1vhc_A 26 DNADDILPLADTLA-KNGLSVAEITFRSEAAADAIRLLRANRPD-F-LIAAGT-VLTAEQVVLAKSSGA-DFV-VTP-G- 97 (224)
T ss_dssp SSGGGHHHHHHHHH-HTTCCEEEEETTSTTHHHHHHHHHHHCTT-C-EEEEES-CCSHHHHHHHHHHTC-SEE-ECS-S-
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEeccCchHHHHHHHHHHhCcC-c-EEeeCc-EeeHHHHHHHHHCCC-CEE-EEC-C-
Confidence 46677777777754 446666665554333 4455667888753 3 233332 446799999888764 444 223 2
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
...++++.|++.|..+++|..+ ..=+--|...++.++|.
T Consensus 98 ----~d~~v~~~ar~~g~~~i~Gv~t-----~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 98 ----LNPKIVKLCQDLNFPITPGVNN-----PMAIEIALEMGISAVKF 136 (224)
T ss_dssp ----CCHHHHHHHHHTTCCEECEECS-----HHHHHHHHHTTCCEEEE
T ss_pred ----CCHHHHHHHHHhCCCEEeccCC-----HHHHHHHHHCCCCEEEE
Confidence 1246677888899999888542 22244466677777776
No 193
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=52.66 E-value=13 Score=33.62 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=44.3
Q ss_pred CcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 152 TCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 152 a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
..+.++|=.+|-|.-.|++++++.|++.|..++.=....++.-...+|..+-+.++
T Consensus 96 ~~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~~~~g 151 (366)
T 3knz_A 96 SGKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILTVPCG 151 (366)
T ss_dssp SCSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECCCCCC
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEecCCC
Confidence 35667788999999999999999999999988766666677777777766655544
No 194
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=52.42 E-value=54 Score=26.97 Aligned_cols=43 Identities=7% Similarity=0.044 Sum_probs=32.5
Q ss_pred ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhcc--CcceeEe
Q 040341 113 DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK--TCNALLL 158 (251)
Q Consensus 113 ~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~--a~n~ilI 158 (251)
-||+..+++.+.+ ++||+.+= =+++++++.+..+.. .++++++
T Consensus 177 ~~~~~~~~i~~~~--~ipvia~G-GI~~~~d~~~~~~~~~~Gadgv~v 221 (244)
T 1vzw_A 177 PNLELLKNVCAAT--DRPVVASG-GVSSLDDLRAIAGLVPAGVEGAIV 221 (244)
T ss_dssp CCHHHHHHHHHTC--SSCEEEES-CCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCHHHHHHHHHhc--CCCEEEEC-CCCCHHHHHHHHhhccCCCceeee
Confidence 4899999999887 57777765 588999999988873 3555443
No 195
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=51.66 E-value=13 Score=33.13 Aligned_cols=54 Identities=20% Similarity=0.214 Sum_probs=42.3
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
-+.++|=.+|-|.-.|++++++.|++.|..++.=....++.-...+|..+-+.+
T Consensus 82 ~~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~~~~ 135 (352)
T 3g68_A 82 ENTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILTVNC 135 (352)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECCCCC
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEEeCC
Confidence 466788899999999999999999999998866555566666666666665544
No 196
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=51.61 E-value=44 Score=25.48 Aligned_cols=88 Identities=13% Similarity=0.040 Sum_probs=57.5
Q ss_pred hhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC---CcEEEecCCCC-CCc-hhH
Q 040341 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG---WGVMASHRSGE-TED-TFI 197 (251)
Q Consensus 123 ~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g---~~~ivs~rsgE-t~d-~~i 197 (251)
+.-|-++.=.|-+ ..++.+..++.+..++.+.|....-.++....+.++..++.| +.+|||....- .+| ...
T Consensus 28 ~~~G~~Vi~lG~~---~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~ 104 (137)
T 1ccw_A 28 TNAGFNVVNIGVL---SPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDV 104 (137)
T ss_dssp HHTTCEEEEEEEE---ECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHH
T ss_pred HHCCCEEEECCCC---CCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhh
Confidence 3345455444554 367777777777788888888766666666777888777765 56899987421 222 334
Q ss_pred hhhhhhcccCccc-cCC
Q 040341 198 ADLSVGLATGQIK-TGA 213 (251)
Q Consensus 198 adLAva~~~~~ik-~G~ 213 (251)
.+++-..|+..+. +|.
T Consensus 105 ~~~~~~~G~d~~~~~g~ 121 (137)
T 1ccw_A 105 EKRFKDMGYDRVYAPGT 121 (137)
T ss_dssp HHHHHHTTCSEECCTTC
T ss_pred HHHHHHCCCCEEECCCC
Confidence 6677777775554 554
No 197
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=51.17 E-value=95 Score=25.30 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=30.2
Q ss_pred HHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee
Q 040341 116 EHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 159 (251)
Q Consensus 116 ~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK 159 (251)
+..+++.+.+ .+|+.... .++++++++.+++.+ ++.+.+-
T Consensus 64 ~~i~~i~~~~--~ipv~v~g-gi~~~~~~~~~l~~G-ad~V~lg 103 (244)
T 2y88_A 64 ELLAEVVGKL--DVQVELSG-GIRDDESLAAALATG-CARVNVG 103 (244)
T ss_dssp HHHHHHHHHC--SSEEEEES-SCCSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHhc--CCcEEEEC-CCCCHHHHHHHHHcC-CCEEEEC
Confidence 5567777777 56776665 689999999999887 6777664
No 198
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=50.45 E-value=66 Score=22.97 Aligned_cols=83 Identities=13% Similarity=0.158 Sum_probs=48.7
Q ss_pred ChhhHHHHHHHhh---hcCCceeecCCCCccc-HHHHHHHHhh---hCCceEEE--cccccccCHHHHHHHHhccCccee
Q 040341 86 SGDGLKNVYRSFI---SDHPIVSIEDPFDQDD-WEHHAELTGK---IGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNAL 156 (251)
Q Consensus 86 s~~elid~~~~l~---~~ypI~~IEDP~~e~D-~~~~~~l~~~---lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~i 156 (251)
+.++.++.+.+.. ..+.++.+.--+...| ++-...+.+. ....++|+ ... .+...+.++...+.++.+
T Consensus 43 ~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~---~~~~~~~~~~~~g~~~~~ 119 (146)
T 3ilh_A 43 SGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSS---LDPRDQAKAEASDWVDYY 119 (146)
T ss_dssp SHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSS---CCHHHHHHHHHCSSCCEE
T ss_pred CHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCC---CChHHHHHHHhcCCccee
Confidence 5667666655422 3455777766555444 3334444441 12234433 222 367778888888878999
Q ss_pred EeeccccccHHHHHH
Q 040341 157 LLKVNQIGSVTESIE 171 (251)
Q Consensus 157 lIK~nqiGtlte~l~ 171 (251)
+.||-....+.++++
T Consensus 120 l~KP~~~~~L~~~i~ 134 (146)
T 3ilh_A 120 VSKPLTANALNNLYN 134 (146)
T ss_dssp ECSSCCHHHHHHHHH
T ss_pred eeCCCCHHHHHHHHH
Confidence 999987655555444
No 199
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=50.18 E-value=65 Score=23.22 Aligned_cols=81 Identities=11% Similarity=0.203 Sum_probs=43.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhh-hCCc--eEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGK-IGRH--VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~-lg~~--~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+. .... +.++.+. .+.+.+.++++.| ++.++.||-
T Consensus 39 ~~~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~---~~~~~~~~~~~~g-a~~~l~Kp~ 112 (144)
T 3kht_A 39 NGAKALYQVQQ--AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN---VSDDRAKQCMAAG-ASSVVDKSS 112 (144)
T ss_dssp SHHHHHHHHTT--CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT---CCHHHHHHHHHTT-CSEEEECCT
T ss_pred CHHHHHHHhhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC---CCHHHHHHHHHcC-CCEEEECCC
Confidence 44555554432 3444776665555444 2333344431 1123 3333332 3577777888775 677899997
Q ss_pred -ccccHHHHHHH
Q 040341 162 -QIGSVTESIEA 172 (251)
Q Consensus 162 -qiGtlte~l~~ 172 (251)
....+.++++.
T Consensus 113 ~~~~~l~~~i~~ 124 (144)
T 3kht_A 113 NNVTDFYGRIYA 124 (144)
T ss_dssp TSHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 76666666553
No 200
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=50.14 E-value=1.2e+02 Score=25.75 Aligned_cols=144 Identities=18% Similarity=0.158 Sum_probs=77.6
Q ss_pred CCcHHHHHHHHHHHHhcCCccceeeeeehhhh--------ccccc---CCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 29 QESYEGFELLKTAIAKGGYIGKIVIGMDVAAS--------EFYDS---KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aas--------e~~~~---~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
.+.+++.++|..|+ ++||+- +|.|.. ++... .+..+-+..|. .....+++.+...+.+-
T Consensus 28 ~~~~~~~~~l~~Al-~~G~~~-----~DTA~~Yg~E~~lG~al~~~~~~R~~~~i~TK~----~~~~~~~~~v~~~~~~S 97 (276)
T 3f7j_A 28 ENGNEATESVKAAI-KNGYRS-----IDTAAIYKNEEGVGIGIKESGVAREELFITSKV----WNEDQGYETTLAAFEKS 97 (276)
T ss_dssp CTTHHHHHHHHHHH-HTTCCE-----EECCGGGSCHHHHHHHHHHHCSCGGGCEEEEEE----CGGGCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HcCCCE-----EECcCcccCHHHHHHHHhhcCCCcccEEEEEee----CCCCCCHHHHHHHHHHH
Confidence 35689999999999 799972 233210 01110 11234343332 11223555554444433
Q ss_pred hh----cC-CceeecCCCCcccHHHHHHHHhhh-CCceEEEcccccccCHHHHHHHHhccCcceeEeecccc--ccHHHH
Q 040341 98 IS----DH-PIVSIEDPFDQDDWEHHAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI--GSVTES 169 (251)
Q Consensus 98 ~~----~y-pI~~IEDP~~e~D~~~~~~l~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi--Gtlte~ 169 (251)
++ +| .+.+|-.|.....-+.|..|.+-. ..++.-+| ++..+++.++++++......+ .||+ .-+..-
T Consensus 98 L~rLg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iG--vSn~~~~~l~~~~~~~~~~~~---~~Q~~~~~~~~~ 172 (276)
T 3f7j_A 98 LERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIG--VSNFQVHHLEELLKDAEIKPM---VNQVEFHPRLTQ 172 (276)
T ss_dssp HHHHTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEE--EESCCHHHHHHHHHHCSSCCS---EEEEECBTTBCC
T ss_pred HHHhCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEE--eccCCHHHHHHHHHhcCCCce---eeeeeeccccCC
Confidence 33 34 377888887654456666664332 12566665 345578899888764322211 1221 011111
Q ss_pred HHHHHHHHHcCCcEEEec
Q 040341 170 IEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 170 l~~~~~a~~~g~~~ivs~ 187 (251)
-+.+..|+++|+.++.-+
T Consensus 173 ~~l~~~~~~~gi~v~a~s 190 (276)
T 3f7j_A 173 KELRDYCKGQGIQLEAWS 190 (276)
T ss_dssp HHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHCCCEEEEec
Confidence 367889999999988755
No 201
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=50.06 E-value=81 Score=25.16 Aligned_cols=120 Identities=11% Similarity=0.052 Sum_probs=67.6
Q ss_pred ChhhHHHHHHHhhhcCCceeecCC--C-CcccHHHHHHHHhhhCCceEEEcccccccCHHH-HHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDP--F-DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKR-VEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP--~-~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~-i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++....+ .. .+-.||+. | -..-++.-+++.+... .++|..|=.+...++. ++.+.+.|+ +.+++- .
T Consensus 11 ~~~~~~~~~~~~-~~-~~diie~G~p~~~~~g~~~i~~ir~~~~-~~~i~~~~~~~~~~~~~~~~~~~~Ga-d~v~v~-~ 85 (211)
T 3f4w_A 11 TLPEAMVFMDKV-VD-DVDIIEVGTPFLIREGVNAIKAIKEKYP-HKEVLADAKIMDGGHFESQLLFDAGA-DYVTVL-G 85 (211)
T ss_dssp CHHHHHHHHHHH-GG-GCSEEEECHHHHHHHTTHHHHHHHHHCT-TSEEEEEEEECSCHHHHHHHHHHTTC-SEEEEE-T
T ss_pred CHHHHHHHHHHh-hc-CccEEEeCcHHHHhccHHHHHHHHHhCC-CCEEEEEEEeccchHHHHHHHHhcCC-CEEEEe-C
Confidence 456767777776 33 35556765 3 2233455566665532 4667555322223555 677776654 666663 2
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTG 212 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G 212 (251)
. ......-++++.++++|..+++.-...+|. .-.+..+...++.++.+.
T Consensus 86 ~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~-~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 86 V-TDVLTIQSCIRAAKEAGKQVVVDMICVDDL-PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp T-SCHHHHHHHHHHHHHHTCEEEEECTTCSSH-HHHHHHHHHHTCCEEEEE
T ss_pred C-CChhHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHcCCCEEEEc
Confidence 2 222333567778888999998763333332 123455666777777754
No 202
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=49.61 E-value=55 Score=23.07 Aligned_cols=81 Identities=12% Similarity=0.162 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCc-ccHHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEeecc-c
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQ-DDWEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-Q 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e-~D~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n-q 162 (251)
+.++.++.+.+ ..+.++.+.-.+.. +-++-.+.+.+... -++-++.+. .+...+.++.+.| ++.++.||- .
T Consensus 39 ~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~---~~~~~~~~~~~~g-~~~~l~KP~~~ 112 (130)
T 3eod_A 39 DGVDALELLGG--FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISAT---ENMADIAKALRLG-VEDVLLKPVKD 112 (130)
T ss_dssp CHHHHHHHHTT--CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECC---CCHHHHHHHHHHC-CSEEEESCC--
T ss_pred CHHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcC---CCHHHHHHHHHcC-CCEEEeCCCCc
Confidence 34455444322 23446666554443 23344444444321 133333333 3567777777765 677899997 6
Q ss_pred cccHHHHHHH
Q 040341 163 IGSVTESIEA 172 (251)
Q Consensus 163 iGtlte~l~~ 172 (251)
...+.++++.
T Consensus 113 ~~~l~~~i~~ 122 (130)
T 3eod_A 113 LNRLREMVFA 122 (130)
T ss_dssp -CHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666555554
No 203
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=48.56 E-value=99 Score=26.80 Aligned_cols=142 Identities=17% Similarity=0.186 Sum_probs=76.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCccceeeeeehhhhccccc-----------------CCcceeecCCCCCCCCCCccChhhH
Q 040341 28 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDS-----------------KDKTYDLNFKEENNDGSQKVSGDGL 90 (251)
Q Consensus 28 ~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~-----------------~~g~Y~l~~~~~~~d~~~~~s~~el 90 (251)
+.+.+++.+.|..|+ ++||+- +|.|. .|.+ .+..+.+..+. .....+++.+
T Consensus 61 ~~d~~e~~~~v~~Al-~~Gi~~-----~DTA~--~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~----~~~~~~~~~~ 128 (314)
T 3b3d_A 61 VEEGSELVNAVKTAI-VHGYRS-----IDTAA--IYGNEAGVGEGIREGIEEAGISREDLFITSKV----WNADLGYEET 128 (314)
T ss_dssp CCCSHHHHHHHHHHH-HHTCCE-----EECCG--GGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEE----CGGGCSHHHH
T ss_pred CCCHHHHHHHHHHHH-HcCCCE-----EECcc--ccCChHHHHHHHHHHHHHhCCCcccccccccC----cCCCCCHHHH
Confidence 345689999999999 789972 23331 1110 01112221111 1223455554
Q ss_pred HHHHHHhhh----cC-CceeecCCCCcccHHHHHHHHhhh-CCceEEEcccccccCHHHHHHHHhccCcce----eEeec
Q 040341 91 KNVYRSFIS----DH-PIVSIEDPFDQDDWEHHAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNA----LLLKV 160 (251)
Q Consensus 91 id~~~~l~~----~y-pI~~IEDP~~e~D~~~~~~l~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~----ilIK~ 160 (251)
...+.+-++ +| .+..+-.|......+.|..|.+-. ..++--+| ++..+++.++++.+...... +.+-+
T Consensus 129 ~~~~e~SL~rL~~dyiDL~~~H~~~~~~~~e~~~al~~l~~~Gkir~iG--vSn~~~~~l~~~~~~~~i~~~~nq~~~~~ 206 (314)
T 3b3d_A 129 LAAFETSLSKLGLDYLDLYLIHWPVEGKYKEAWRALETLYKEGRIKAIG--VSNFQIHHLEDLMTAAEIKPMINQVEFHP 206 (314)
T ss_dssp HHHHHHHHHHHTCSCEEEEEESSCCTTTHHHHHHHHHHHHHTTSEEEEE--EESCCHHHHHHHTTTCSSCCSEEEEECBT
T ss_pred HHHHHHHHHHhCCCcccccccccccccchhHHHHHHHHHHHCCCEeEEE--ecCCchHHHHHHHHhcCCCeEEEEecccc
Confidence 444333233 33 367777777666666676665432 12566666 34457888888765432222 22221
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
... --+++.+|+++|+.++.-.-
T Consensus 207 ~~~-----~~~ll~~c~~~gI~v~a~sP 229 (314)
T 3b3d_A 207 RLT-----QKELIRYCQNQGIQMEAWSP 229 (314)
T ss_dssp TBC-----CHHHHHHHHHHTCEEEEEST
T ss_pred ccc-----hHHHHHHHHHcCCEEEEecc
Confidence 111 12567899999999977553
No 204
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=47.99 E-value=26 Score=29.46 Aligned_cols=110 Identities=7% Similarity=0.039 Sum_probs=68.6
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
.+.+++++..+.++ +.++-.||=.+...+ .+..+++.+++.+ + ++|=.. +.+.++++.+++.++- .+. -| |
T Consensus 35 ~~~~~~~~~~~al~-~gGv~~iel~~k~~~~~~~i~~l~~~~~~-~-~igagt-vl~~d~~~~A~~aGAd-~v~-~p-~- 106 (225)
T 1mxs_A 35 AREEDILPLADALA-AGGIRTLEVTLRSQHGLKAIQVLREQRPE-L-CVGAGT-VLDRSMFAAVEAAGAQ-FVV-TP-G- 106 (225)
T ss_dssp SCGGGHHHHHHHHH-HTTCCEEEEESSSTHHHHHHHHHHHHCTT-S-EEEEEC-CCSHHHHHHHHHHTCS-SEE-CS-S-
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEEecCCccHHHHHHHHHHhCcc-c-EEeeCe-EeeHHHHHHHHHCCCC-EEE-eC-C-
Confidence 35667778777754 456666666655433 3345557777753 3 233332 4577999999988754 332 22 2
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
...++++.|+..|..+++|..+. + =+--|...++.++|.
T Consensus 107 ----~d~~v~~~~~~~g~~~i~G~~t~-~----e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 107 ----ITEDILEAGVDSEIPLLPGISTP-S----EIMMGYALGYRRFKL 145 (225)
T ss_dssp ----CCHHHHHHHHHCSSCEECEECSH-H----HHHHHHTTTCCEEEE
T ss_pred ----CCHHHHHHHHHhCCCEEEeeCCH-H----HHHHHHHCCCCEEEE
Confidence 13577788888999999886532 1 144566778888887
No 205
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=47.97 E-value=39 Score=30.31 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=73.5
Q ss_pred hHHHHHHHhhhcCCceeecCCCCcccHHHHHHH-HhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-ccccc
Q 040341 89 GLKNVYRSFISDHPIVSIEDPFDQDDWEHHAEL-TGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGS 165 (251)
Q Consensus 89 elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l-~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGt 165 (251)
+.+.....++..-.-+.+.+|....-+..+..+ .++.|-++..+ | ..+++.+++++..+ ..+|.+- | |-.|.
T Consensus 93 ~Ai~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v-~---~~d~~~l~~~i~~~-~~~v~~e~~~np~G~ 167 (400)
T 3nmy_A 93 AATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV-D---LTDPAAFKAAIRAD-TKMVWIETPTNPMLK 167 (400)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE-C---TTSHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred HHHHHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE-C---CCCHHHHHHHhccC-CCEEEEECCCCCCCe
Confidence 444444444444446777888887667777766 66676554333 2 23788999888653 3455554 2 45677
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCCCC----CCchhHhhhhhhcccCccc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRSGE----TEDTFIADLSVGLATGQIK 210 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rsgE----t~d~~iadLAva~~~~~ik 210 (251)
+...-+++++|+++|+.+++-.--+. ....+=+|+.+.+.+..+-
T Consensus 168 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~ 216 (400)
T 3nmy_A 168 LVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLN 216 (400)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTT
T ss_pred eecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccC
Confidence 77888889999999999988764331 1112236677766665554
No 206
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=47.60 E-value=32 Score=33.18 Aligned_cols=71 Identities=10% Similarity=0.150 Sum_probs=47.8
Q ss_pred ccChhhHHHHHHHhhhcCCceee-------cCCCC-------ccc-HHHHHHHHhhhCCceEEEcccccccCHHHHHHHH
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSI-------EDPFD-------QDD-WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAI 148 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~I-------EDP~~-------e~D-~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i 148 (251)
.++.++.+.+.+. ++++++-+| |.++. +.+ ++..+.+.+.+ +++|++.. -+++++.+++.+
T Consensus 224 g~~~~~~~~~a~~-l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~G-gi~~~~~a~~~l 299 (671)
T 1ps9_A 224 GGTFAETVELAQA-IEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTN-RINDPQVADDIL 299 (671)
T ss_dssp CCCHHHHHHHHHH-HHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECS-SCCSHHHHHHHH
T ss_pred CCCHHHHHHHHHH-HHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeC-CCCCHHHHHHHH
Confidence 4677887776665 577776666 34332 122 34445566666 67888877 578999999999
Q ss_pred hccCcceeEe
Q 040341 149 KEKTCNALLL 158 (251)
Q Consensus 149 ~~~a~n~ilI 158 (251)
+.+.++.|.+
T Consensus 300 ~~g~aD~V~~ 309 (671)
T 1ps9_A 300 SRGDADMVSM 309 (671)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCCCEEEe
Confidence 9887777653
No 207
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=47.52 E-value=1.2e+02 Score=28.35 Aligned_cols=117 Identities=11% Similarity=0.199 Sum_probs=67.7
Q ss_pred HHHHHHhhhc-CCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec--cc---
Q 040341 91 KNVYRSFISD-HPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV--NQ--- 162 (251)
Q Consensus 91 id~~~~l~~~-ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~--nq--- 162 (251)
.+....|++. -.++.| .+|....=++.-+++.++.++ ++|+.-+ |.+++..+.+++.| ++++.+-. +-
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~-~~vi~g~--v~t~e~a~~~~~aG-ad~i~vg~g~gsi~~ 333 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPS-LNIIAGN--VATAEATKALIEAG-ANVVKVGIGPGSICT 333 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT-SEEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCC-ceEEeee--eccHHHHHHHHHhC-CCEEEECCCCccccc
Confidence 4555555543 223333 455444434455566666643 5565543 67889988888776 45555411 00
Q ss_pred --------cccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 163 --------IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 163 --------iGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
..+++...++.+.+++.++++|.+..-...+| ... |+++|+..+-.|.+
T Consensus 334 ~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~d-i~k--ala~GA~~V~vGs~ 390 (511)
T 3usb_A 334 TRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGD-MVK--ALAAGAHVVMLGSM 390 (511)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHH-HHH--HHHTTCSEEEESTT
T ss_pred cccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHH-HHH--HHHhCchhheecHH
Confidence 23466666777788888999999875433322 111 35566777777765
No 208
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=47.51 E-value=38 Score=30.60 Aligned_cols=69 Identities=6% Similarity=-0.079 Sum_probs=43.8
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCCC------c--ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCccee
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPFD------Q--DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNAL 156 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~~------e--~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~i 156 (251)
.+.++.+.+.+. ++++++-+|+-+-. . .+|+..+.+.+.+ +++|++-.- + +++..++.++.+.|+.|
T Consensus 253 ~~~~~~~~la~~-le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~-i-~~~~a~~~l~~g~aD~V 327 (376)
T 1icp_A 253 NPTALGLYMVES-LNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGG-Y-DREDGNRALIEDRADLV 327 (376)
T ss_dssp CHHHHHHHHHHH-HGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESS-C-CHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHH-HHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCC-C-CHHHHHHHHHCCCCcEE
Confidence 345566665555 68888777754221 1 2333445677777 456665552 4 68999999999888877
Q ss_pred Ee
Q 040341 157 LL 158 (251)
Q Consensus 157 lI 158 (251)
.+
T Consensus 328 ~~ 329 (376)
T 1icp_A 328 AY 329 (376)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 209
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=46.75 E-value=44 Score=30.00 Aligned_cols=68 Identities=10% Similarity=0.128 Sum_probs=41.0
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCC------cccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFD------QDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~------e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+.++.+.+.+. ++++++-+|+-+-. ..+|+..+.+.+.+ +++|++-.- + +++.++++++.+.|+.|.+
T Consensus 249 ~~~~~~~~a~~-l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~--~iPvi~~Gg-i-t~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 249 EEADALYLIEE-LAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF--HGVIIGAGA-Y-TAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHHHH-HHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC--CSEEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHH-HHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC--CCCEEEECC-c-CHHHHHHHHHCCCccEEEE
Confidence 45555554444 57777665553321 23455556677777 456665552 3 6888888888877777654
No 210
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=46.62 E-value=8.5 Score=34.38 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=55.2
Q ss_pred HHHHHHHHHh-cCCcc-ceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHH-----------HHHHHhhhcC
Q 040341 35 FELLKTAIAK-GGYIG-KIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLK-----------NVYRSFISDH 101 (251)
Q Consensus 35 l~~i~~Ai~~-aGy~~-kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~eli-----------d~~~~l~~~y 101 (251)
+..|...+++ .++++ .|.++.|.....-|+. ..|. ++| +|+..+|+++. .+.+++++.+
T Consensus 48 ~~~L~~ll~~~k~~~P~~iavaFD~~~~~tfR~--elyp-~YK-----anR~~~PeeL~~Q~~~l~~Qi~p~ike~l~a~ 119 (305)
T 3h7i_A 48 LNSIKFNVKKAKTLGYTKIVLCIDNAKSGYWRR--DFAY-YYK-----KNRGKAREESTWDWEGYFESSHKVIDELKAYM 119 (305)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCCTTCCHHH--HHST-TTT-----HHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhhccCCCEEEEEecCCCCcchHh--hhCH-Hhc-----cCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHC
Confidence 3455555554 23455 5899999763222332 2331 133 46667777754 6889999999
Q ss_pred CceeecCCCCc-ccHHH-HHHHHhhhCCceEEEccc
Q 040341 102 PIVSIEDPFDQ-DDWEH-HAELTGKIGRHVQIVGDD 135 (251)
Q Consensus 102 pI~~IEDP~~e-~D~~~-~~~l~~~lg~~~~ivgDd 135 (251)
+|..++-|=.| ||+-+ .++..+.-|.++.||.-|
T Consensus 120 gi~~l~~~G~EADDiIgTLA~~a~~~g~~V~IvSgD 155 (305)
T 3h7i_A 120 PYIVMDIDKYEANDHIAVLVKKFSLEGHKILIISSD 155 (305)
T ss_dssp SSEEECCTTCCHHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEccCCccHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 98888776654 66543 333334445677777544
No 211
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=46.40 E-value=15 Score=32.45 Aligned_cols=50 Identities=16% Similarity=0.163 Sum_probs=38.1
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhh
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
-+.++|=.+|-|.-.+++++++.|++.|..++.=....++.-...+|..+
T Consensus 74 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l 123 (329)
T 3eua_A 74 EKSLVILCSHSGNTPETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVA 123 (329)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEE
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEE
Confidence 45677888999999999999999999999886555555555555555544
No 212
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=46.35 E-value=1e+02 Score=23.89 Aligned_cols=54 Identities=22% Similarity=0.178 Sum_probs=39.4
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+-++|=.++-|.-.+++++++.|++.|.+++.=....++.-...+|..+-+..
T Consensus 87 ~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~ 140 (187)
T 3sho_A 87 PTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAAT 140 (187)
T ss_dssp TTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECCC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEecC
Confidence 345566688889999999999999999999876555555555556666555444
No 213
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=46.17 E-value=64 Score=26.70 Aligned_cols=73 Identities=18% Similarity=0.321 Sum_probs=43.1
Q ss_pred CccChhhHHHHHHH-hhhcCCceeecC------CCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcce
Q 040341 83 QKVSGDGLKNVYRS-FISDHPIVSIED------PFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA 155 (251)
Q Consensus 83 ~~~s~~elid~~~~-l~~~ypI~~IED------P~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ 155 (251)
...+.+++.+.|.+ +.++|.++.||= |+..+ .....+.+.++..+.+|.|
T Consensus 92 ~~i~~~~i~~~~~~~l~~~~D~vlIEgaggl~~p~~~~--~~~adla~~l~~pviLV~~--------------------- 148 (228)
T 3of5_A 92 VDISIENLKQFIEDKYNQDLDILFIEGAGGLLTPYSDH--TTQLDLIKALQIPVLLVSA--------------------- 148 (228)
T ss_dssp CCCCHHHHHHHHHGGGGSSCSEEEEEEEEETTCBSSSS--CBHHHHHHHHTCCEEEEEE---------------------
T ss_pred CCCCHHHHHHHHHHHHHccCCEEEEECCCccccccccc--hhHHHHHHHcCCCEEEEEc---------------------
Confidence 34567888888888 778899999884 44321 1122333344333444433
Q ss_pred eEeeccccccHHHHHHHHHHHHHcCCcE
Q 040341 156 LLLKVNQIGSVTESIEAVKMSKRAGWGV 183 (251)
Q Consensus 156 ilIK~nqiGtlte~l~~~~~a~~~g~~~ 183 (251)
.+.|++..++..++..+..|+.+
T Consensus 149 -----~~~~~i~~~~~~~~~l~~~~~~i 171 (228)
T 3of5_A 149 -----IKVGCINHTLLTINELNRHNIKL 171 (228)
T ss_dssp -----CSTTHHHHHHHHHHHHHHTTCCE
T ss_pred -----CCcchHHHHHHHHHHHHhCCCcE
Confidence 33456666666666666666654
No 214
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=46.10 E-value=54 Score=29.44 Aligned_cols=123 Identities=11% Similarity=-0.012 Sum_probs=75.9
Q ss_pred hhhHHHHHHHhh-hcCC---ceeecCCCCcccHHHHHHHHhhhCCce-----EEE-cccccccCHHHHHHHHhcc--Ccc
Q 040341 87 GDGLKNVYRSFI-SDHP---IVSIEDPFDQDDWEHHAELTGKIGRHV-----QIV-GDDLLVTNPKRVEKAIKEK--TCN 154 (251)
Q Consensus 87 ~~elid~~~~l~-~~yp---I~~IEDP~~e~D~~~~~~l~~~lg~~~-----~iv-gDdl~vtn~~~i~~~i~~~--a~n 154 (251)
..+.+......+ +..+ -|.+++|-...+...|..+.+..|-++ .++ -|+-+.-+++.++++++.. ...
T Consensus 137 ~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 216 (465)
T 3e9k_A 137 LTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIA 216 (465)
T ss_dssp HHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeE
Confidence 445555433333 2222 388899999999999998877776442 232 2222445899999998742 333
Q ss_pred eeEeec--cccccHHHHHHHHHHHHHcCCcEEEecCCCC--CC---chhHhhhhhhcccCcc
Q 040341 155 ALLLKV--NQIGSVTESIEAVKMSKRAGWGVMASHRSGE--TE---DTFIADLSVGLATGQI 209 (251)
Q Consensus 155 ~ilIK~--nqiGtlte~l~~~~~a~~~g~~~ivs~rsgE--t~---d~~iadLAva~~~~~i 209 (251)
.+++-. |-.|.+...-++.++|+++|+.+++-.-.+- .. +..=+|+++.+...++
T Consensus 217 lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l 278 (465)
T 3e9k_A 217 VILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYL 278 (465)
T ss_dssp EEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTT
T ss_pred EEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECccccc
Confidence 444432 4578888888899999999998887632221 11 1223566666655555
No 215
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=45.97 E-value=16 Score=32.42 Aligned_cols=55 Identities=22% Similarity=0.289 Sum_probs=42.8
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
.+.++|=.+|-|.-.|++++++.|++.|..++.=....++.-...+|..+-+.++
T Consensus 90 ~~dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~g 144 (334)
T 3hba_A 90 AGGLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIPLRAG 144 (334)
T ss_dssp TTCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEECCCC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeeeecCC
Confidence 4556777899999999999999999999988766666666666667766655443
No 216
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=45.75 E-value=14 Score=32.90 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=42.9
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccC
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~ 207 (251)
.+.++|=.+|-|.-.|++++++.|+++|..++.=....++.-...+|..+-+.++
T Consensus 91 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g 145 (344)
T 3fj1_A 91 DRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAG 145 (344)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEECCCC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeeecCCC
Confidence 4567788999999999999999999999988766655666666667766655443
No 217
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=45.47 E-value=66 Score=26.97 Aligned_cols=125 Identities=13% Similarity=0.092 Sum_probs=76.3
Q ss_pred HHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHH
Q 040341 91 KNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 170 (251)
Q Consensus 91 id~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l 170 (251)
..++++-+ .-|++.| |..--|+-.--+..++.+.++-+||-...+...+.+...... -|+.-.+-+-.|+-
T Consensus 74 a~~Lr~~~-~iPVV~I--~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~------~i~~~~~~~~ee~~ 144 (225)
T 2pju_A 74 GAYLKSRL-SVPVILI--KPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNL------RLDQRSYITEEDAR 144 (225)
T ss_dssp HHHHHTTC-SSCEEEE--CCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTC------CEEEEEESSHHHHH
T ss_pred HHHHHhhC-CCCEEEe--cCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCC------ceEEEEeCCHHHHH
Confidence 45555432 3455555 555445433333334556789999888555555666655433 24455577888999
Q ss_pred HHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHh
Q 040341 171 EAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEEL 233 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l 233 (251)
++++.+++.|+.++||. ....++|=-.|...+..-+ +..=..-.++=++|.+..
T Consensus 145 ~~i~~l~~~G~~vVVG~-------~~~~~~A~~~Gl~~vlI~s--~eSI~~Ai~eA~~l~~~~ 198 (225)
T 2pju_A 145 GQINELKANGTEAVVGA-------GLITDLAEEAGMTGIFIYS--AATVRQAFSDALDMTRMS 198 (225)
T ss_dssp HHHHHHHHTTCCEEEES-------HHHHHHHHHTTSEEEESSC--HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCEEECC-------HHHHHHHHHcCCcEEEECC--HHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 3568888555554444432 222223456666666554
No 218
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=45.17 E-value=51 Score=28.08 Aligned_cols=84 Identities=10% Similarity=0.061 Sum_probs=56.1
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhc-cCcceeEeec-cccccHHHHHHHHHHHHH
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKE-KTCNALLLKV-NQIGSVTESIEAVKMSKR 178 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~-~a~n~ilIK~-nqiGtlte~l~~~~~a~~ 178 (251)
..+.+.+|-+.. |....+..|-++..+ -|+-+.-+++.++++++. +..-.++.-| |-.|.+.+.-++.++|++
T Consensus 124 d~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 199 (397)
T 3f9t_A 124 PKIIVPITAHFS----FEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKE 199 (397)
T ss_dssp CEEEEETTCCTH----HHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred eEEEECCcchhH----HHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 478888886643 555555566554443 233244589999999887 4433344444 456777777788999999
Q ss_pred cCCcEEEecCC
Q 040341 179 AGWGVMASHRS 189 (251)
Q Consensus 179 ~g~~~ivs~rs 189 (251)
+|+.+++-.-.
T Consensus 200 ~~~~li~Dea~ 210 (397)
T 3f9t_A 200 NNIYIHVDAAF 210 (397)
T ss_dssp HTCEEEEECTT
T ss_pred hCCeEEEEccc
Confidence 99988886643
No 219
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=44.72 E-value=99 Score=30.45 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=26.2
Q ss_pred CCCCcHHHHHHHHHHH---HhcCCcc---c-eeeeeehhhh
Q 040341 27 NIQESYEGFELLKTAI---AKGGYIG---K-IVIGMDVAAS 60 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai---~~aGy~~---k-I~iglD~Aas 60 (251)
++|.+|-.|+.|++|+ ++.|.++ + |.+.-|...+
T Consensus 215 n~D~PE~g~dAl~qa~~c~~~igWr~~a~rllv~~TDa~~H 255 (690)
T 3fcs_B 215 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTH 255 (690)
T ss_dssp CSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBC
T ss_pred CCCCCchHHHHHHHHhhcccccCCCCCceEEEEEECCCccc
Confidence 4678899999999998 7889884 4 6667776544
No 220
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=44.51 E-value=1.6e+02 Score=25.58 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=77.8
Q ss_pred CCcHHHHHHHHHHHHhcCCccceeeeeehhhh--------ccccc---CCcceeecCCCCCCCCCCccChhhHHHHHHHh
Q 040341 29 QESYEGFELLKTAIAKGGYIGKIVIGMDVAAS--------EFYDS---KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 97 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aas--------e~~~~---~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l 97 (251)
.+.+++.++|..|+ ++||+- +|.|.. ++... .+..+.+..|.. ....+++.+...+.+-
T Consensus 62 ~~~~~~~~~l~~Al-~~Gi~~-----~DTA~~Yg~E~~lG~al~~~~~~R~~v~I~TK~~----~~~~~~~~i~~~~e~S 131 (310)
T 3b3e_A 62 ENGNEATESVKAAI-KNGYRS-----IDTAAIYKNEEGVGIGIKESGVAREELFITSKVW----NEDQGYETTLAAFEKS 131 (310)
T ss_dssp CTTHHHHHHHHHHH-HTTCCE-----EECCGGGSCHHHHHHHHHHSSSCGGGCEEEEEEC----GGGCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HcCCCE-----EECCCccCCHHHHHHHHHhcCCCcceEEEEEeCC----CCCCCHHHHHHHHHHH
Confidence 35689999999999 789972 233210 01110 112343433320 1123555554444443
Q ss_pred hh----cC-CceeecCCCCcccHHHHHHHHhhh-CCceEEEcccccccCHHHHHHHHhccCc----ceeEeeccccccHH
Q 040341 98 IS----DH-PIVSIEDPFDQDDWEHHAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTC----NALLLKVNQIGSVT 167 (251)
Q Consensus 98 ~~----~y-pI~~IEDP~~e~D~~~~~~l~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a~----n~ilIK~nqiGtlt 167 (251)
++ +| .+++|-.|.....-+.|..|.+-. ..++--+| ++..+++.++++++.... |-+..-|-.
T Consensus 132 L~rLg~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iG--vSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~----- 204 (310)
T 3b3e_A 132 LERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIG--VSNFQVHHLEELLKDAEIKPMVNQVEFHPRL----- 204 (310)
T ss_dssp HHHHTCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEE--EESCCHHHHHHHHHHCSSCCSEEEEECBTTB-----
T ss_pred HHHhCCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEe--ecCCCHHHHHHHHHhcCCCcceeeeeccCcc-----
Confidence 33 33 378888886654445666664432 12566666 345578888888764322 222222211
Q ss_pred HHHHHHHHHHHcCCcEEEecC
Q 040341 168 ESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 168 e~l~~~~~a~~~g~~~ivs~r 188 (251)
.--+++..|+++|+.++.-.-
T Consensus 205 ~~~~l~~~~~~~gi~v~a~sp 225 (310)
T 3b3e_A 205 TQKELRDYCKGQGIQLEAWSP 225 (310)
T ss_dssp CCHHHHHHHHHHTCEEEEEST
T ss_pred CCHHHHHHHHHcCCEEEEecc
Confidence 113678899999999987553
No 221
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=44.08 E-value=1.2e+02 Score=24.98 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=65.1
Q ss_pred hhHHHHHHHhhhcCCc----eeec---CCCCcccHHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEee
Q 040341 88 DGLKNVYRSFISDHPI----VSIE---DPFDQDDWEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 159 (251)
Q Consensus 88 ~elid~~~~l~~~ypI----~~IE---DP~~e~D~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK 159 (251)
.++++.+.+++.++++ +.|| .-+. .|.+....+.+++. ..+.|..|| |-+....+....... .+ .||
T Consensus 105 ~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~-~~~~~~~~~l~~l~~~G~~ialDd-fG~g~ssl~~L~~l~-~d--~iK 179 (259)
T 3s83_A 105 PGLVADVAETLRVNRLPRGALKLEVTESDIM-RDPERAAVILKTLRDAGAGLALDD-FGTGFSSLSYLTRLP-FD--TLK 179 (259)
T ss_dssp TTHHHHHHHHHHHTTCCTTSEEEEEEHHHHH-HCHHHHHHHHHHHHHHTCEEEEEC-C---CHHHHHHHHSC-CC--EEE
T ss_pred cHHHHHHHHHHHHcCCCcceEEEEECCchhh-hCHHHHHHHHHHHHHCCCEEEEEC-CCCCchhHHHHHhCC-CC--EEE
Confidence 3556677777777652 2232 2221 23333333322221 148899999 666555555544332 23 456
Q ss_pred ccc--ccc------H-HHHHHHHHHHHHcCCcEEEecCCCCCCc--hhHhhhhhhcccCccccCCCCchhHH
Q 040341 160 VNQ--IGS------V-TESIEAVKMSKRAGWGVMASHRSGETED--TFIADLSVGLATGQIKTGAPCRSERL 220 (251)
Q Consensus 160 ~nq--iGt------l-te~l~~~~~a~~~g~~~ivs~rsgEt~d--~~iadLAva~~~~~ik~G~~~r~Er~ 220 (251)
+.+ +.. - .-.-.++++|+..|+.+++.. .||+. .++.++-+-..-|+... -|...+.+
T Consensus 180 iD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG--VEt~~~~~~l~~lG~~~~QG~~~~-~p~~~~~~ 248 (259)
T 3s83_A 180 IDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG--VENAEMAHALQSLGCDYGQGFGYA-PALSPQEA 248 (259)
T ss_dssp ECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHHHHHHHHHTCCEECBTTTB-CCBCHHHH
T ss_pred ECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe--CCCHHHHHHHHhcCCCEeecCccc-CCCCHHHH
Confidence 543 111 1 113345779999999999888 46644 55566666666677654 33334433
No 222
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=43.69 E-value=14 Score=32.96 Aligned_cols=54 Identities=15% Similarity=0.202 Sum_probs=40.7
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+.++|=.+|-|.-.|++++++.|++.|..++.=....++.-...+|..+-+.+
T Consensus 89 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~ 142 (347)
T 3fkj_A 89 KNSVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQW 142 (347)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEEECBC
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEEEecc
Confidence 467788899999999999999999999998866555555555555565544433
No 223
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=43.64 E-value=1.6e+02 Score=25.34 Aligned_cols=119 Identities=9% Similarity=0.137 Sum_probs=73.2
Q ss_pred ccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChh-hHHHHHHHhhhc
Q 040341 22 GGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGD-GLKNVYRSFISD 100 (251)
Q Consensus 22 GGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~-elid~~~~l~~~ 100 (251)
|+..+++ +.++..+.|..++....+ .+|+ -+ .+ +..+|.+ +.++.+.+.+++
T Consensus 101 ~~L~~~~-s~~ei~~~l~~al~~vP~----a~Gv--------------nN--Hm------GS~~T~~~~~M~~vm~~L~~ 153 (261)
T 2qv5_A 101 DTLLAGD-PAKVNIDRLHRSMAKITN----YTGV--------------MN--YL------GGRFLAEQSALEPVMRDIGK 153 (261)
T ss_dssp TCBCTTS-CHHHHHHHHHHHHTTCCC----CSEE--------------EE--EE------CTTGGGCHHHHHHHHHHHHH
T ss_pred CcCcCCC-CHHHHHHHHHHHHHHCCC----cEEE--------------ec--cc------ccchhcCHHHHHHHHHHHHH
Confidence 4455554 568888888888865443 1111 11 22 2345543 456666666799
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCC---ceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGR---HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~---~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++.++-+--...-. . .++.++.|= +..|..|+ ..++..|++.+ -+++++|+
T Consensus 154 ~gL~FlDS~Ts~~S~-a-~~~A~~~gvp~~~rdvFLD~--~~~~~~I~~qL---------------------~~a~~~Ar 208 (261)
T 2qv5_A 154 RGLLFLDDGSSAQSL-S-GGIAKAISAPQGFADVLLDG--EVTEASILRKL---------------------DDLERIAR 208 (261)
T ss_dssp TTCEEEECSCCTTCC-H-HHHHHHHTCCEEECSEETTS--SCSHHHHHHHH---------------------HHHHHHHH
T ss_pred CCCEEEcCCCCcccH-H-HHHHHHcCCCeEEeeeecCC--CCCHHHHHHHH---------------------HHHHHHHH
Confidence 999999776654432 2 244455532 22366776 46677666543 36888999
Q ss_pred HcCCcEEEecCCCCC
Q 040341 178 RAGWGVMASHRSGET 192 (251)
Q Consensus 178 ~~g~~~ivs~rsgEt 192 (251)
++|.-++|||-..+|
T Consensus 209 ~~G~AIaIGhp~p~T 223 (261)
T 2qv5_A 209 RNGQAIGVASAFDES 223 (261)
T ss_dssp HHSEEEEEEECCHHH
T ss_pred hcCcEEEEeCCCHHH
Confidence 999999999975544
No 224
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=43.33 E-value=1.4e+02 Score=25.47 Aligned_cols=120 Identities=17% Similarity=0.206 Sum_probs=63.4
Q ss_pred hhhHHHHHHHhhhcCCc----eee---cCCCCcccHHHHHHHH---hhhCCceEEEccccccc---CHHHHHHHHhccCc
Q 040341 87 GDGLKNVYRSFISDHPI----VSI---EDPFDQDDWEHHAELT---GKIGRHVQIVGDDLLVT---NPKRVEKAIKEKTC 153 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI----~~I---EDP~~e~D~~~~~~l~---~~lg~~~~ivgDdl~vt---n~~~i~~~i~~~a~ 153 (251)
..++++.+.+++++|++ +.| |.-+.. |.+...... +.. .+.|..|| |-| |...+.+.
T Consensus 128 ~~~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~-~~~~~~~~l~~Lr~~--G~~ialDD-FGtG~ssl~~L~~l------ 197 (294)
T 2r6o_A 128 GEHLTRAVDRALARSGLRPDCLELEITENVMLV-MTDEVRTCLDALRAR--GVRLALDD-FGTGYSSLSYLSQL------ 197 (294)
T ss_dssp GGHHHHHHHHHHHHHCCCGGGEEEEEEGGGGGG-CCHHHHHHHHHHHHH--TCEEEEEE-ETSSCBCHHHHHHS------
T ss_pred CcHHHHHHHHHHHHcCCCcCEEEEEEeCCchhh-ChHHHHHHHHHHHHC--CCEEEEEC-CCCCchhHHHHHhC------
Confidence 34566777777777654 233 443332 223333322 334 47899999 554 55555542
Q ss_pred ceeEeeccc-----ccc----HHHHHHHHHHHHHcCCcEEEecCCCCCCc--hhHhhhhhhcccCccccCCCCchhH
Q 040341 154 NALLLKVNQ-----IGS----VTESIEAVKMSKRAGWGVMASHRSGETED--TFIADLSVGLATGQIKTGAPCRSER 219 (251)
Q Consensus 154 n~ilIK~nq-----iGt----lte~l~~~~~a~~~g~~~ivs~rsgEt~d--~~iadLAva~~~~~ik~G~~~r~Er 219 (251)
..=.||+.+ +.+ -.-.-.++.+|+..|+.++.-. .||+. .++.++-+-..-|+... -|...+.
T Consensus 198 ~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG--VEt~~q~~~l~~lG~d~~QGy~~~-~P~~~~~ 271 (294)
T 2r6o_A 198 PFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG--IETAQQYAFLRDRGCEFGQGNLMS-TPQAADA 271 (294)
T ss_dssp CCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHHHHHHHHTTCCEECSTTTC-CCEEHHH
T ss_pred CCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec--CCcHHHHHHHHHcCCCEEEcCccC-CCCCHHH
Confidence 223455532 211 1112346789999999998887 46644 44444444444455543 3433333
No 225
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=43.20 E-value=1.2e+02 Score=26.16 Aligned_cols=102 Identities=14% Similarity=0.112 Sum_probs=65.6
Q ss_pred hhhHHHHHHHhh-----hcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEeec
Q 040341 87 GDGLKNVYRSFI-----SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 87 ~~elid~~~~l~-----~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
..+.+......+ ..=.-|.+.+|-...-...|..+.+..|-++..+ -|+-+.-+++.+++++..+ ..+|++-.
T Consensus 99 ~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~ 177 (420)
T 1t3i_A 99 ATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEK-TKLVTVVH 177 (420)
T ss_dssp HHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTT-EEEEEEES
T ss_pred hHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCC-ceEEEEeC
Confidence 456556555544 2223677888888777666777777766554333 2332445789999988653 34555543
Q ss_pred --cccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 161 --NQIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 161 --nqiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
|-.|.+...-++.++|+++|+.+++-.-.
T Consensus 178 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 208 (420)
T 1t3i_A 178 ISNTLGCVNPAEEIAQLAHQAGAKVLVDACQ 208 (420)
T ss_dssp BCTTTCBBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred CcccccCcCCHHHHHHHHHHcCCEEEEEhhh
Confidence 22577666677889999999988886543
No 226
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=43.14 E-value=1.3e+02 Score=24.40 Aligned_cols=41 Identities=5% Similarity=-0.159 Sum_probs=21.5
Q ss_pred cChhhHHHHHHHhhhcCCceeecCC-------CCcccHHHHHHHHhhhCCce
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDP-------FDQDDWEHHAELTGKIGRHV 129 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP-------~~e~D~~~~~~l~~~lg~~~ 129 (251)
.+.++.++..+ +.++-.||=. +.++++..++++.++.|=++
T Consensus 30 ~~~~~~l~~~~----~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i 77 (257)
T 3lmz_A 30 FDLDTTLKTLE----RLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTG 77 (257)
T ss_dssp SCHHHHHHHHH----HTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHH----HhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 35666555544 4454444422 22445566777777765443
No 227
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=42.77 E-value=65 Score=28.29 Aligned_cols=93 Identities=12% Similarity=0.115 Sum_probs=55.9
Q ss_pred CCceEEEcccccccCHHHHHH-HHhc--------cCcceeEeecccc---ccHHHHHHHHHHHHHcCCcEEEecCCCCCC
Q 040341 126 GRHVQIVGDDLLVTNPKRVEK-AIKE--------KTCNALLLKVNQI---GSVTESIEAVKMSKRAGWGVMASHRSGETE 193 (251)
Q Consensus 126 g~~~~ivgDdl~vtn~~~i~~-~i~~--------~a~n~ilIK~nqi---Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~ 193 (251)
|.++.|++--=..-..+.+++ |+.- +-..+++||-|.+ |+++++++.++.. ....++.|...+-|
T Consensus 133 g~~~~i~dTRKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~Av~~ar~~-~~~~~IeVEv~tl~-- 209 (287)
T 3tqv_A 133 QYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTKAKKL-DSNKVVEVEVTNLD-- 209 (287)
T ss_dssp TSSCEEECCSCCCTTCHHHHHHHHHHTTCBCCCSSSSSSEEECTTTC----CHHHHHHHHHHH-CTTSCEEEEESSHH--
T ss_pred CCCeEEEeecccCcchHHHHHHHHHhcCchheeccCccEEEEeHHHHHHhCCHHHHHHHHHhh-CCCCcEEEEeCCHH--
Confidence 446766655433223444443 4443 3446899998875 8999998887653 34567788665332
Q ss_pred chhHhhhhhhcccCccccCCCCchhHHHHhhH
Q 040341 194 DTFIADLSVGLATGQIKTGAPCRSERLAKYNQ 225 (251)
Q Consensus 194 d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~ 225 (251)
=+.-|+..++..|...-++. +-+.+.-+
T Consensus 210 ---ea~eAl~aGaD~I~LDn~~~-~~l~~av~ 237 (287)
T 3tqv_A 210 ---ELNQAIAAKADIVMLDNFSG-EDIDIAVS 237 (287)
T ss_dssp ---HHHHHHHTTCSEEEEESCCH-HHHHHHHH
T ss_pred ---HHHHHHHcCCCEEEEcCCCH-HHHHHHHH
Confidence 14557777888888877643 43443333
No 228
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=42.21 E-value=37 Score=31.84 Aligned_cols=98 Identities=20% Similarity=0.088 Sum_probs=54.1
Q ss_pred ccccccCHHHHHHHHhc--------cC----cceeEeeccccccHHHHH--------HHHHHHHHc-CCc-EEEecCC--
Q 040341 134 DDLLVTNPKRVEKAIKE--------KT----CNALLLKVNQIGSVTESI--------EAVKMSKRA-GWG-VMASHRS-- 189 (251)
Q Consensus 134 Ddl~vtn~~~i~~~i~~--------~a----~n~ilIK~nqiGtlte~l--------~~~~~a~~~-g~~-~ivs~rs-- 189 (251)
+++-+|+|+..++-++. +. .+++-| +-|+||-...- .+-++.+.- +++ .++=..|
T Consensus 190 ~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~l-vVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghStD 268 (450)
T 3txv_A 190 DTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGA-VVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHSTD 268 (450)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEE-ECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCCT
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEE-EecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCCC
Confidence 34468999998877653 12 334344 44555543300 111222333 566 6664445
Q ss_pred CCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHHHHHHhC
Q 040341 190 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG 234 (251)
Q Consensus 190 gEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llrie~~l~ 234 (251)
|-+.+.. -=+|..+-.-+|.|.=....=...+--|-.||++|-
T Consensus 269 y~~~e~l--~~~V~~GiaklNVgp~Lt~a~reAl~aL~~ie~~l~ 311 (450)
T 3txv_A 269 YQTPDAL--RELVADGFAILKVGPGLTFALREALYGLDQIAAFLF 311 (450)
T ss_dssp TCCHHHH--HHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHH--HHHHHcCCcEEEEChHHHHHHHHHHHHHHHHHHHHc
Confidence 4443332 224555666788876555555667788999999994
No 229
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=42.12 E-value=19 Score=29.72 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=33.5
Q ss_pred HHHHHhccCcceeEeeccccccHHHHHHHHHHHHH--cCCcEEEec
Q 040341 144 VEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR--AGWGVMASH 187 (251)
Q Consensus 144 i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~--~g~~~ivs~ 187 (251)
.++.+-...++++++=|+-+||+.|.+++..++|- ++.++++=.
T Consensus 100 ~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 100 ERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 34444455689999999999999999999987763 566666544
No 230
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=41.60 E-value=37 Score=29.72 Aligned_cols=86 Identities=20% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCceEEEcccccccCHHHHH-HHHhccC--------cceeEeecccc---ccHHHHHHHHHHHHHcCCcEEEecCCCCCC
Q 040341 126 GRHVQIVGDDLLVTNPKRVE-KAIKEKT--------CNALLLKVNQI---GSVTESIEAVKMSKRAGWGVMASHRSGETE 193 (251)
Q Consensus 126 g~~~~ivgDdl~vtn~~~i~-~~i~~~a--------~n~ilIK~nqi---Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~ 193 (251)
+.++.|++.--..-..+.++ +|+.-+. .++++||-|.+ |++.++++.++........+.|+.++ .
T Consensus 130 ~~~~~i~~TRKt~Pglr~~~kyAv~~GGg~nHR~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev~t---~ 206 (286)
T 1x1o_A 130 GTKAQILDTRKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVRS---L 206 (286)
T ss_dssp TSSCEEECCSCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEESS---H
T ss_pred CCCcEEEEcCCCChhhHHHHHHHHHhCCCcccccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEeCC---H
Confidence 34676766653333344444 3555443 35899999986 78877776665443333567776643 2
Q ss_pred chhHhhhhhhcccCccccCCCCc
Q 040341 194 DTFIADLSVGLATGQIKTGAPCR 216 (251)
Q Consensus 194 d~~iadLAva~~~~~ik~G~~~r 216 (251)
+. +.-|+..++.+|-.+.+..
T Consensus 207 ee--a~eA~~aGaD~I~ld~~~~ 227 (286)
T 1x1o_A 207 EE--LEEALEAGADLILLDNFPL 227 (286)
T ss_dssp HH--HHHHHHHTCSEEEEESCCH
T ss_pred HH--HHHHHHcCCCEEEECCCCH
Confidence 22 4556777899999998754
No 231
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=41.49 E-value=19 Score=29.90 Aligned_cols=44 Identities=18% Similarity=0.115 Sum_probs=33.5
Q ss_pred HHHHHhccCcceeEeeccccccHHHHHHHHHHHHH--cCCcEEEec
Q 040341 144 VEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKR--AGWGVMASH 187 (251)
Q Consensus 144 i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~--~g~~~ivs~ 187 (251)
.++.+-...++++++=|+-+||+.|.+++..+.|- ++.++++=.
T Consensus 109 ~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 109 ERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 44555555789999999999999999999998763 455665544
No 232
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=40.99 E-value=1.4e+02 Score=23.99 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=60.1
Q ss_pred cHHHHHHHHHHHHhcCCcc-----c-eeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhh-----
Q 040341 31 SYEGFELLKTAIAKGGYIG-----K-IVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS----- 99 (251)
Q Consensus 31 ~eeal~~i~~Ai~~aGy~~-----k-I~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~----- 99 (251)
.+++.+++.+++ +.|+.+ + +.++++.... .|.. |++.+...- -..-.-++.++.+...+.
T Consensus 16 ~~~~~~~~~~al-~~g~~~~~i~~~~l~p~m~~vG~-~w~~--g~~~~~~~~-----~~~~~~~~~l~~l~~~~~~~~~~ 86 (210)
T 1y80_A 16 EAQVVELTRSLL-SGGAEPLEVINKGLIAGMDRVGV-LFKN--NEMFVPEVL-----MSANAMNAGVEVVKQSQQAFDMP 86 (210)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred HHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHH-HHcC--CceeHHHHH-----HHHHHHHHHHHHHHHHhccccCC
Confidence 356677778877 566653 2 5556665433 3333 555443110 001112222333322222
Q ss_pred cCC-ceeecCCCCcccHHHH--HHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 100 DHP-IVSIEDPFDQDDWEHH--AELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 100 ~yp-I~~IEDP~~e~D~~~~--~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
.-| ++..=-|-+.+|+-.+ +.+-+.-|-++...|-+ ..++.+..++.....+.|.|......++....+.++..
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~---vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l 163 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD---IEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDAL 163 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS---BCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC---CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHH
Confidence 122 4444444445565433 34445556677666765 36778888887778999999887777888888999988
Q ss_pred HHcC----CcEEEecCC
Q 040341 177 KRAG----WGVMASHRS 189 (251)
Q Consensus 177 ~~~g----~~~ivs~rs 189 (251)
++.| +++|||...
T Consensus 164 ~~~~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 164 IAAGLRDRVKVIVGGAP 180 (210)
T ss_dssp HHTTCGGGCEEEEESTT
T ss_pred HhcCCCCCCeEEEECCC
Confidence 8876 788999863
No 233
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=40.81 E-value=94 Score=21.96 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=43.2
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccH-HHHHHHHhhhCCceEE--EcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDW-EHHAELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~-~~~~~l~~~lg~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++....+.+ -..+.++.+.--+...|- +-...+.+.-...++| +... .+.+.+.++.+.+ ++.++.||-.
T Consensus 39 ~~~~a~~~~~~-~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~---~~~~~~~~~~~~g-~~~~l~KP~~ 113 (136)
T 3hdv_A 39 GAEEARLYLHY-QKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGD---TDVEEAVDVMHLG-VVDFLLKPVD 113 (136)
T ss_dssp SHHHHHHHHHH-CTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESS---CCHHHHHHHHHTT-CSEEEESSCC
T ss_pred CHHHHHHHHHh-CCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCC---CChHHHHHHHhCC-cceEEeCCCC
Confidence 34454444443 122457777666655443 3333444331223444 3332 3567777888776 7789999976
Q ss_pred cccHHHHHH
Q 040341 163 IGSVTESIE 171 (251)
Q Consensus 163 iGtlte~l~ 171 (251)
...+.++++
T Consensus 114 ~~~l~~~i~ 122 (136)
T 3hdv_A 114 LGKLLELVN 122 (136)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544443
No 234
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=40.67 E-value=20 Score=32.39 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=26.3
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSGE 191 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsgE 191 (251)
++.||..|..++++.|+++|++||+ .|++++
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~ 105 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN 105 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECCSEEEET
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEccCcCCCc
Confidence 5789999999999999999999954 565443
No 235
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=40.64 E-value=1.5e+02 Score=25.13 Aligned_cols=101 Identities=12% Similarity=0.118 Sum_probs=50.9
Q ss_pred ccChhhHHHHHHHhh-----hcCCceeecCCCC-cccHHHHHHHHhhh---CCceEEEcccc-------cccCHHHHHHH
Q 040341 84 KVSGDGLKNVYRSFI-----SDHPIVSIEDPFD-QDDWEHHAELTGKI---GRHVQIVGDDL-------LVTNPKRVEKA 147 (251)
Q Consensus 84 ~~s~~elid~~~~l~-----~~ypI~~IEDP~~-e~D~~~~~~l~~~l---g~~~~ivgDdl-------~vtn~~~i~~~ 147 (251)
.++.+++-+++..|. .++..+.+ =.+. .+..+...++.+++ +.++++|.|=. +.-+++-++..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~~d~v~~-G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l 134 (289)
T 3pzs_A 56 VMPASHLTDIVQGIADIDRLKDCDAVLS-GYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFF 134 (289)
T ss_dssp ECCHHHHHHHHHHHHHTTCGGGCCEEEE-CCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCccCCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHH
Confidence 456667666666542 35554322 2232 23344444544443 44578888821 11223322222
Q ss_pred HhccCcceeEeeccc----------cccHHHHHHHHHHHHHcCCcEEE
Q 040341 148 IKEKTCNALLLKVNQ----------IGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 148 i~~~a~n~ilIK~nq----------iGtlte~l~~~~~a~~~g~~~iv 185 (251)
.+.-...+-+|+||+ +.+..+..++++...+.|...+|
T Consensus 135 ~~~ll~~~diitpN~~E~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vv 182 (289)
T 3pzs_A 135 CNEALPASDMIAPNLLELEQLSGERVENVEQAVQVARSLCARGPKVVL 182 (289)
T ss_dssp HHTHHHHCSEECCCHHHHHHHHTSCCCSHHHHHHHHHHHHTTSCSEEE
T ss_pred HHHhhccCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 111123455889986 23456677777777777765443
No 236
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=40.49 E-value=97 Score=27.64 Aligned_cols=72 Identities=14% Similarity=0.209 Sum_probs=44.4
Q ss_pred hhhC-CceEEEcccccccC----HHHHHHHHhccCcceeEee-ccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCc
Q 040341 123 GKIG-RHVQIVGDDLLVTN----PKRVEKAIKEKTCNALLLK-VNQIGSVTESIEAVKMSKRAGWGVMASHRSGETED 194 (251)
Q Consensus 123 ~~lg-~~~~ivgDdl~vtn----~~~i~~~i~~~a~n~ilIK-~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d 194 (251)
+++| .++.||.|...... .+++...++......+.+. ...--++....++++.+++++..++|+-.-|-+.|
T Consensus 29 ~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D 106 (387)
T 3bfj_A 29 QLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHD 106 (387)
T ss_dssp HHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHHH
T ss_pred HHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcchhh
Confidence 3344 57777777743332 5666666654333443332 22335888888899999999999998876444433
No 237
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=39.24 E-value=1.5e+02 Score=25.95 Aligned_cols=152 Identities=14% Similarity=0.021 Sum_probs=81.8
Q ss_pred cCCCCCcHHHHHHHHHHHHh--cCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCC--ccChhhHHHHHHHhhhc
Q 040341 25 APNIQESYEGFELLKTAIAK--GGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQ--KVSGDGLKNVYRSFISD 100 (251)
Q Consensus 25 ap~~~~~eeal~~i~~Ai~~--aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~--~~s~~elid~~~~l~~~ 100 (251)
.+++..+++.++.+.++++. .+|... ...+--+..+++.. .|.+.... ..- .-+..+.+....+.+-+
T Consensus 70 ~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~l~~~l~~---~~g~~~~~----~~v~~~~g~~ea~~~a~~~~~~ 141 (421)
T 3l8a_A 70 DMDFLPVPEIKEAIINYGREHIFGYNYF-NDDLYQAVIDWERK---EHDYAVVK----EDILFIDGVVPAISIALQAFSE 141 (421)
T ss_dssp CCCSCCCHHHHHHHHHHHHHCCSSCBCC-CHHHHHHHHHHHHH---HHCCCCCG----GGEEEESCHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHhcCCcCCCCC-CHHHHHHHHHHHHH---HhCCCCCH----HHEEEcCCHHHHHHHHHHHhcC
Confidence 34556678899999998865 234321 11111122222211 11100000 000 11345566665554444
Q ss_pred C-CceeecCCCCcccHHHHHHHHhhhCCceEEE----cccccccCHHHHHHHHhccCcceeEee-c-cccccH---HHHH
Q 040341 101 H-PIVSIEDPFDQDDWEHHAELTGKIGRHVQIV----GDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSV---TESI 170 (251)
Q Consensus 101 y-pI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv----gDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtl---te~l 170 (251)
. .-+.+.+|-. .+|....+..|.++..+ .+.-+.-+++.+++++......+++|= | |-.|.+ .+.-
T Consensus 142 ~gd~Vi~~~~~y----~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~ 217 (421)
T 3l8a_A 142 KGDAVLINSPVY----YPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLI 217 (421)
T ss_dssp TEEEEEEEESCC----HHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHH
T ss_pred CCCEEEECCCCc----HHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHH
Confidence 3 2566777765 34555555555333222 232234589999999874445556554 3 335655 7888
Q ss_pred HHHHHHHHcCCcEEEecC
Q 040341 171 EAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~r 188 (251)
++.++|+++|+.+++-.-
T Consensus 218 ~l~~l~~~~~~~li~De~ 235 (421)
T 3l8a_A 218 KIAELCKKHGVILVSDEI 235 (421)
T ss_dssp HHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHcCCEEEEEcc
Confidence 889999999998887553
No 238
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=38.92 E-value=53 Score=29.85 Aligned_cols=112 Identities=18% Similarity=0.139 Sum_probs=72.3
Q ss_pred HHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccccHHHHHH
Q 040341 94 YRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSVTESIE 171 (251)
Q Consensus 94 ~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtlte~l~ 171 (251)
+..++..-.-|.+.+|....-+..|....+..|-++..+- ..+++.+++++..+ ..+|.+- | |-.|.+.+.-+
T Consensus 114 l~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~----~~d~~~l~~ai~~~-t~~v~~e~p~NptG~~~dl~~ 188 (430)
T 3ri6_A 114 ILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD----VMDSLAVEHACDET-TKLLFLETISNPQLQVADLEA 188 (430)
T ss_dssp HHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC----TTCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC----CCCHHHHHHhhCCC-CeEEEEECCCCCCCeecCHHH
Confidence 3344444346778888887666667656667765554442 23789999888653 3445443 3 55788888888
Q ss_pred HHHHHHHcCCcEEEecCCCC--C--CchhHhhhhhhcccCccc
Q 040341 172 AVKMSKRAGWGVMASHRSGE--T--EDTFIADLSVGLATGQIK 210 (251)
Q Consensus 172 ~~~~a~~~g~~~ivs~rsgE--t--~d~~iadLAva~~~~~ik 210 (251)
++++|+++|+.+++-.-.+. . ....=+|+.+.+.+.++-
T Consensus 189 i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~ 231 (430)
T 3ri6_A 189 LSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFIS 231 (430)
T ss_dssp HHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEE
T ss_pred HHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCccccc
Confidence 99999999999998754322 1 112225777777666554
No 239
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=38.69 E-value=91 Score=26.66 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=66.7
Q ss_pred hhhHHHHHHHhh-----hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEc-ccccccCHHHHHHHHhccCcceeEeec
Q 040341 87 GDGLKNVYRSFI-----SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG-DDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 87 ~~elid~~~~l~-----~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg-Ddl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
..+.+......+ +.=.-+.+.+|-+..-+..|..+.+..|-++..+- |+-..-+++.+++++..+ ..+|++-.
T Consensus 94 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~ 172 (406)
T 1kmj_A 94 TTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEK-TRLLAITH 172 (406)
T ss_dssp HHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTT-EEEEEEES
T ss_pred hhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccC-CeEEEEeC
Confidence 446556555544 22236778889888778888888777765554442 222334688888887653 44555543
Q ss_pred --cccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 161 --NQIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 161 --nqiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
|-.|.+...-+++++|+++|+.+++-.-.
T Consensus 173 ~~nptG~~~~l~~i~~l~~~~~~~li~D~~~ 203 (406)
T 1kmj_A 173 VSNVLGTENPLAEMITLAHQHGAKVLVDGAQ 203 (406)
T ss_dssp BCTTTCCBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCccccCcCCHHHHHHHHHHcCCEEEEEchh
Confidence 34566666677888999999988886543
No 240
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=38.67 E-value=1.1e+02 Score=21.91 Aligned_cols=80 Identities=8% Similarity=0.062 Sum_probs=42.2
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCc--eEEEcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRH--VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~--~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+. ... +.++.+. .+.+.++++.+ +..++.||-.
T Consensus 43 ~~~~al~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~-----~~~~~~~~~~g-~~~~l~KP~~ 113 (143)
T 2qv0_A 43 DGLDVLKFLQH--NKVDAIFLDINIPSLDGVLLAQNISQF-AHKPFIVFITAW-----KEHAVEAFELE-AFDYILKPYQ 113 (143)
T ss_dssp CHHHHHHHHHH--CCCSEEEECSSCSSSCHHHHHHHHTTS-TTCCEEEEEESC-----CTTHHHHHHTT-CSEEEESSCC
T ss_pred CHHHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcc-CCCceEEEEeCC-----HHHHHHHHhCC-cceEEeCCCC
Confidence 45565555443 3455777665554433 2333333332 222 3333332 22455666655 5778999987
Q ss_pred cccHHHHHHHHH
Q 040341 163 IGSVTESIEAVK 174 (251)
Q Consensus 163 iGtlte~l~~~~ 174 (251)
...+.++++.+-
T Consensus 114 ~~~l~~~i~~~~ 125 (143)
T 2qv0_A 114 ESRIINMLQKLT 125 (143)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 767766665543
No 241
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=38.40 E-value=50 Score=29.72 Aligned_cols=43 Identities=2% Similarity=-0.001 Sum_probs=35.1
Q ss_pred HHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 142 KRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 142 ~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
+.+.++++.| ...++=|| + ++.|+-+++++|+++|..+||++.
T Consensus 85 ~~a~~al~aG-khVl~EKP--l-~~~ea~~l~~~A~~~g~~~~v~~~ 127 (372)
T 4gmf_A 85 QLARHFLARG-VHVIQEHP--L-HPDDISSLQTLAQEQGCCYWINTF 127 (372)
T ss_dssp HHHHHHHHTT-CEEEEESC--C-CHHHHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHcC-CcEEEecC--C-CHHHHHHHHHHHHHcCCEEEEcCc
Confidence 4455666554 57777899 5 899999999999999999999984
No 242
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=38.20 E-value=1e+02 Score=21.74 Aligned_cols=83 Identities=6% Similarity=0.021 Sum_probs=45.4
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhh-hCCceEEE--cccccccCHHHHHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGK-IGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~-lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+. ....++|+ .+. .+...+.++.+.+ +..++.||-
T Consensus 42 ~~~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~---~~~~~~~~~~~~g-~~~~l~kP~ 115 (143)
T 3cnb_A 42 NPFDAGDLLHT--VKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGA---LTDDNVSRIVALG-AETCFGKPL 115 (143)
T ss_dssp SHHHHHHHHHH--TCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESS---CCHHHHHHHHHTT-CSEEEESSC
T ss_pred CHHHHHHHHHh--cCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCC---CCHHHHHHHHhcC-CcEEEeCCC
Confidence 45566665554 3566777766555444 3334444441 12234443 333 3566677777765 567889997
Q ss_pred ccccHHHHHHHHHHHH
Q 040341 162 QIGSVTESIEAVKMSK 177 (251)
Q Consensus 162 qiGtlte~l~~~~~a~ 177 (251)
... +..++++.+.
T Consensus 116 ~~~---~l~~~i~~~~ 128 (143)
T 3cnb_A 116 NFT---LLEKTIKQLV 128 (143)
T ss_dssp CHH---HHHHHHHHHH
T ss_pred CHH---HHHHHHHHHH
Confidence 544 4444444443
No 243
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=38.00 E-value=1.1e+02 Score=21.84 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=43.0
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEE--EcccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+..+.++.+.. ..+.++.+.--+...| ++-...+.+.. ..+++ +... .+...+..++..+.++.++.||-.
T Consensus 32 ~~~~a~~~~~~--~~~dlvl~D~~lp~~~g~~~~~~l~~~~-~~~~ii~~s~~---~~~~~~~~~~~~~ga~~~l~KP~~ 105 (139)
T 2jk1_A 32 GAEAAIAILEE--EWVQVIICDQRMPGRTGVDFLTEVRERW-PETVRIIITGY---TDSASMMAAINDAGIHQFLTKPWH 105 (139)
T ss_dssp SHHHHHHHHHH--SCEEEEEEESCCSSSCHHHHHHHHHHHC-TTSEEEEEESC---TTCHHHHHHHHHTTCCEEEESSCC
T ss_pred CHHHHHHHHhc--CCCCEEEEeCCCCCCcHHHHHHHHHHhC-CCCcEEEEeCC---CChHHHHHHHHhhchhhhccCCCC
Confidence 45566555443 3344666554444333 33334444432 23333 3222 234556667777778899999987
Q ss_pred cccHHHHHHH
Q 040341 163 IGSVTESIEA 172 (251)
Q Consensus 163 iGtlte~l~~ 172 (251)
...+.++++.
T Consensus 106 ~~~L~~~i~~ 115 (139)
T 2jk1_A 106 PEQLLSSARN 115 (139)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6555555544
No 244
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=37.96 E-value=1e+02 Score=25.94 Aligned_cols=71 Identities=13% Similarity=0.247 Sum_probs=44.2
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCC------CCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeE
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDP------FDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 157 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP------~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~il 157 (251)
..+.+++.+.|.++.++|.++.||=| +.+ + .....+.+.++..+.+|.
T Consensus 115 ~i~~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~-~-~~~adlA~~l~~pVILV~------------------------ 168 (242)
T 3qxc_A 115 PIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITL-E-ENMLDFALKLKAKMLLIS------------------------ 168 (242)
T ss_dssp CCCHHHHHHHHHHGGGTCSEEEEECCSCTTCBSSS-S-CBHHHHHHHHTCEEEEEE------------------------
T ss_pred cCCHHHHHHHHHHHHhcCCEEEEECCCCccccccc-c-chHHHHHHHcCCCEEEEE------------------------
Confidence 34677888999998888999999864 321 1 122233344433343333
Q ss_pred eeccccccHHHHHHHHHHHHHcCCc
Q 040341 158 LKVNQIGSVTESIEAVKMSKRAGWG 182 (251)
Q Consensus 158 IK~nqiGtlte~l~~~~~a~~~g~~ 182 (251)
-.+.|++..++..++..++.|+.
T Consensus 169 --~~~lg~i~~~~lt~~~l~~~g~~ 191 (242)
T 3qxc_A 169 --HDNLGLINDCLLNDFLLKSHQLD 191 (242)
T ss_dssp --CCSTTHHHHHHHHHHHHHTSSSC
T ss_pred --cCCCcHHHHHHHHHHHHHhCCCC
Confidence 34456777888777777766664
No 245
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=37.94 E-value=90 Score=28.57 Aligned_cols=49 Identities=14% Similarity=0.218 Sum_probs=35.6
Q ss_pred ccccccHHHHHHHHHHHHHcCCc-E----EEecCCCCCCchhHhhh--hhhcccCcc
Q 040341 160 VNQIGSVTESIEAVKMSKRAGWG-V----MASHRSGETEDTFIADL--SVGLATGQI 209 (251)
Q Consensus 160 ~nqiGtlte~l~~~~~a~~~g~~-~----ivs~rsgEt~d~~iadL--Ava~~~~~i 209 (251)
+|+..+..+++++++.++++|+. + |+|- .|||.+++..++ +..++...+
T Consensus 182 i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~Gl-Pget~e~~~~tl~~~~~l~~~~i 237 (457)
T 1olt_A 182 VNREQDEEFIFALLNHAREIGFTSTNIDLIYGL-PKQTPESFAFTLKRVAELNPDRL 237 (457)
T ss_dssp HTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESC-TTCCHHHHHHHHHHHHHHCCSEE
T ss_pred hCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCC-CCCCHHHHHHHHHHHHhcCcCEE
Confidence 46778999999999999999997 4 4444 589988776654 444444433
No 246
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=37.73 E-value=1.7e+02 Score=25.27 Aligned_cols=96 Identities=10% Similarity=0.124 Sum_probs=60.4
Q ss_pred hHHHHHHHh-hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-ccccc
Q 040341 89 GLKNVYRSF-ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGS 165 (251)
Q Consensus 89 elid~~~~l-~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGt 165 (251)
+.+...... +..=.-+.+.+|-+..-+..|..+.+..|.++..+- ..+++.++++++.+ ..++.+- | |-.|.
T Consensus 78 ~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 152 (386)
T 1cs1_A 78 SAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD----QGDEQALRAALAEK-PKLVLVESPSNPLLR 152 (386)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC----TTCHHHHHHHHHTC-CSEEEEECSCTTTCC
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC----CCCHHHHHHhhccC-CcEEEEeCCCCCCCc
Confidence 444444443 233235667777776555666666666665554442 23788999888753 4455554 3 34577
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCC
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rs 189 (251)
+.+.-++.++|+++|+.+++-.-.
T Consensus 153 ~~~l~~i~~l~~~~~~~li~De~~ 176 (386)
T 1cs1_A 153 VVDIAKICHLAREVGAVSVVDNTF 176 (386)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTT
T ss_pred ccCHHHHHHHHHHcCCEEEEECCC
Confidence 777788889999999988886543
No 247
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=37.64 E-value=67 Score=29.46 Aligned_cols=113 Identities=7% Similarity=0.162 Sum_probs=59.7
Q ss_pred HHHHhhh-cCCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee--cc-----c
Q 040341 93 VYRSFIS-DHPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK--VN-----Q 162 (251)
Q Consensus 93 ~~~~l~~-~ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK--~n-----q 162 (251)
....+++ .-+++.| -.+..+.-++..+++.+.+ .++|+.- .|++++.++.+++.+ +++|.+= ++ +
T Consensus 148 ~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~--~i~Vi~g--~V~t~e~A~~a~~aG-AD~I~vG~g~Gs~~~tr 222 (400)
T 3ffs_A 148 RAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVG--NVVTEEATKELIENG-ADGIKVGIGPGSICTTR 222 (400)
T ss_dssp HHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC--CCEEEEE--EECSHHHHHHHHHTT-CSEEEECC---------
T ss_pred HHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC--CCeEEEe--ecCCHHHHHHHHHcC-CCEEEEeCCCCcCcccc
Confidence 3444443 3346655 2222222244555666666 4666632 367899988888765 5555551 10 1
Q ss_pred ------cccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCC
Q 040341 163 ------IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 213 (251)
Q Consensus 163 ------iGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~ 213 (251)
..+++...++++.+++.++++|.+..-... .+.. -|+++|+..+..|.
T Consensus 223 ~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~-~di~--kalalGAd~V~vGt 276 (400)
T 3ffs_A 223 IVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYS-GDIG--KALAVGASSVMIGS 276 (400)
T ss_dssp CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSH-HHHH--HHHTTTCSEEEECG
T ss_pred cccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCH-HHHH--HHHHcCCCEEEECh
Confidence 234455555666666678888886643222 2222 23445666666664
No 248
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=37.31 E-value=30 Score=29.63 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=46.2
Q ss_pred HHHHHHHhccCcceeEeeccc-cc----cHHHHHHHHHHHHHcCCcEEEecCCCC-------CCchh--HhhhhhhcccC
Q 040341 142 KRVEKAIKEKTCNALLLKVNQ-IG----SVTESIEAVKMSKRAGWGVMASHRSGE-------TEDTF--IADLSVGLATG 207 (251)
Q Consensus 142 ~~i~~~i~~~a~n~ilIK~nq-iG----tlte~l~~~~~a~~~g~~~ivs~rsgE-------t~d~~--iadLAva~~~~ 207 (251)
..++++++.|+ +.+-+..|- -+ .+.++.++.+.|+++|.++++-..... |.+.. .+.+|...++.
T Consensus 96 ~~ve~Ai~~Ga-~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 96 CSVEEAVSLGA-SAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp SCHHHHHHTTC-SEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCC-CEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 34566776654 444333310 11 345566777788899999877653310 22222 25789999999
Q ss_pred ccccCCCCchhH
Q 040341 208 QIKTGAPCRSER 219 (251)
Q Consensus 208 ~ik~G~~~r~Er 219 (251)
|+|++-|..-|.
T Consensus 175 ~vkt~~~~~~e~ 186 (263)
T 1w8s_A 175 AMKIKYTGDPKT 186 (263)
T ss_dssp EEEEECCSSHHH
T ss_pred EEEEcCCCCHHH
Confidence 999997643344
No 249
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=37.03 E-value=67 Score=26.43 Aligned_cols=41 Identities=7% Similarity=0.093 Sum_probs=28.0
Q ss_pred cHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 114 DWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 114 D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+++..+++.+.+ .+||+... .++++++++.+++.+ ++.+.|
T Consensus 63 ~~~~i~~i~~~~--~iPvi~~G-gi~~~~~~~~~~~~G-ad~V~l 103 (252)
T 1ka9_F 63 LLDVVARVAERV--FIPLTVGG-GVRSLEDARKLLLSG-ADKVSV 103 (252)
T ss_dssp HHHHHHHHHTTC--CSCEEEES-SCCSHHHHHHHHHHT-CSEEEE
T ss_pred cHHHHHHHHHhC--CCCEEEEC-CcCCHHHHHHHHHcC-CCEEEE
Confidence 344456666666 57777766 678889999888877 555543
No 250
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=36.81 E-value=56 Score=28.93 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=58.4
Q ss_pred HHHHHHHhhh-----CCceEEEcccccccCHHHHHH-HHh--------ccCcceeEeecccc---ccHHHHHHHHHHHHH
Q 040341 116 EHHAELTGKI-----GRHVQIVGDDLLVTNPKRVEK-AIK--------EKTCNALLLKVNQI---GSVTESIEAVKMSKR 178 (251)
Q Consensus 116 ~~~~~l~~~l-----g~~~~ivgDdl~vtn~~~i~~-~i~--------~~a~n~ilIK~nqi---Gtlte~l~~~~~a~~ 178 (251)
.+++..++++ +.++.|++--=..-..+.+++ |+. .+-.++++||-|.+ |+++++++.++...
T Consensus 127 SGIAT~T~~~v~~~~~~~~~i~dTRKT~PGlR~lekyAV~~GGg~nHR~gL~D~vLIKdNHi~~~G~i~~Av~~ar~~~- 205 (300)
T 3l0g_A 127 SGIASITRQFVDEVSGTKVKIRSTRKTTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNL- 205 (300)
T ss_dssp HHHHHHHHHHHHHTTTSSCEEECCSCCCTTCHHHHHHHHHHTTCBCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHhCCCCEEEeecCccChhhhHHHHHHHHhcCCcccccCCcceEEEcHhHHHHhCCHHHHHHHHHHhC-
Confidence 4555555543 446777665433334445553 544 34557899999974 99999988876532
Q ss_pred cCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCC
Q 040341 179 AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 215 (251)
Q Consensus 179 ~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~ 215 (251)
-..++.|..++-|- +.-|+..++..|..--++
T Consensus 206 p~~kIeVEv~tl~e-----~~eAl~aGaDiImLDn~s 237 (300)
T 3l0g_A 206 KNEYIAIECDNISQ-----VEESLSNNVDMILLDNMS 237 (300)
T ss_dssp SSCCEEEEESSHHH-----HHHHHHTTCSEEEEESCC
T ss_pred CCCCEEEEECCHHH-----HHHHHHcCCCEEEECCCC
Confidence 34677776654322 455667778888776664
No 251
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=36.36 E-value=73 Score=28.08 Aligned_cols=113 Identities=11% Similarity=0.110 Sum_probs=64.6
Q ss_pred CccChhhHHHHHHHhhhcCCc--eee----cCCCCcccHHHHHHHHhhhCC-ceEEEcccccccCHHHHHHHHhccCcce
Q 040341 83 QKVSGDGLKNVYRSFISDHPI--VSI----EDPFDQDDWEHHAELTGKIGR-HVQIVGDDLLVTNPKRVEKAIKEKTCNA 155 (251)
Q Consensus 83 ~~~s~~elid~~~~l~~~ypI--~~I----EDP~~e~D~~~~~~l~~~lg~-~~~ivgDdl~vtn~~~i~~~i~~~a~n~ 155 (251)
..++++|+++....+ .++++ ++| .+|.. -+.+.+.++.+.+.. .+.|+-. .-..+++.++...+.| ++.
T Consensus 97 ~~~s~eei~~~~~~~-~~~g~~~i~~~gg~~~p~~-~~~~~l~~ll~~ik~~g~~i~~t-~G~l~~e~l~~L~~aG-vd~ 172 (369)
T 1r30_A 97 RLMEVEQVLESARKA-KAAGSTRFCMGAAWKNPHE-RDMPYLEQMVQGVKAMGLEACMT-LGTLSESQAQRLANAG-LDY 172 (369)
T ss_dssp CCCCHHHHHHHHHHH-HHTTCSEEEEEECCSSCCT-TTHHHHHHHHHHHHHTTSEEEEE-CSSCCHHHHHHHHHHC-CCE
T ss_pred ccCCHHHHHHHHHHH-HHcCCcEEEEEeCCCCCCc-CCHHHHHHHHHHHHHcCCeEEEe-cCCCCHHHHHHHHHCC-CCE
Confidence 347899988877764 44442 233 23544 344445554443310 1233311 1123677777655543 455
Q ss_pred eEee----------ccccccHHHHHHHHHHHHHcCCcE----EEecCCCCCCchhHhhhh
Q 040341 156 LLLK----------VNQIGSVTESIEAVKMSKRAGWGV----MASHRSGETEDTFIADLS 201 (251)
Q Consensus 156 ilIK----------~nqiGtlte~l~~~~~a~~~g~~~----ivs~rsgEt~d~~iadLA 201 (251)
+.|- ..+.++..+.+++++.+++.|+.+ |+|. +||.+++...+.
T Consensus 173 v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl--~et~ed~~~~l~ 230 (369)
T 1r30_A 173 YNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL--GETVKDRAGLLL 230 (369)
T ss_dssp EECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS--SCCHHHHHHHHH
T ss_pred EeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeC--CCCHHHHHHHHH
Confidence 5432 234578999999999999998876 5555 788666554443
No 252
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=36.19 E-value=1.2e+02 Score=21.65 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=40.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccHHHH---HHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeec
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHH---AELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~---~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
+.++.++.+.+ ..+.++.+.- +.. ..++ ..+.+. ...++|+ .+. .+.+.+.++.+.++ +.++.||
T Consensus 36 ~~~~a~~~l~~--~~~dlvi~d~-~~~--~~g~~~~~~l~~~-~~~~pii~ls~~---~~~~~~~~~~~~g~-~~~l~kP 105 (142)
T 2qxy_A 36 NEQEAFTFLRR--EKIDLVFVDV-FEG--EESLNLIRRIREE-FPDTKVAVLSAY---VDKDLIINSVKAGA-VDYILKP 105 (142)
T ss_dssp SHHHHHHHHTT--SCCSEEEEEC-TTT--HHHHHHHHHHHHH-CTTCEEEEEESC---CCHHHHHHHHHHTC-SCEEESS
T ss_pred CHHHHHHHHhc--cCCCEEEEeC-CCC--CcHHHHHHHHHHH-CCCCCEEEEECC---CCHHHHHHHHHCCc-ceeEeCC
Confidence 34555554433 3455777665 543 3343 333333 2234443 332 34666777777664 5688999
Q ss_pred cccccHHHHHHH
Q 040341 161 NQIGSVTESIEA 172 (251)
Q Consensus 161 nqiGtlte~l~~ 172 (251)
-....+.++++.
T Consensus 106 ~~~~~l~~~i~~ 117 (142)
T 2qxy_A 106 FRLDYLLERVKK 117 (142)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 765555555443
No 253
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=36.13 E-value=1.2e+02 Score=27.19 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=68.1
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccccHHHHHHHHHHHHHc
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtlte~l~~~~~a~~~ 179 (251)
.-+.+.+|....-+..+..+.++.|-++..+ | ..+++.+++++..+ ..+|.+- | |-.|.+.+.-+++++|+++
T Consensus 121 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~---~~d~~~l~~ai~~~-t~~v~le~p~NptG~~~~l~~i~~la~~~ 195 (414)
T 3ndn_A 121 DRLVAARSLFGSCFVVCSEILPRWGVQTVFV-D---GDDLSQWERALSVP-TQAVFFETPSNPMQSLVDIAAVTELAHAA 195 (414)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-C---TTCHHHHHHHTSSC-CSEEEEESSCTTTCCCCCHHHHHHHHHHT
T ss_pred CEEEEcCCccchHHHHHHHHHHHcCcEEEEe-C---CCCHHHHHHhcCCC-CeEEEEECCCCCCCccccHHHHHHHHHHc
Confidence 3677888888766666666666676555443 2 23789999988754 4455553 3 5678888888899999999
Q ss_pred CCcEEEecCCCC----CCchhHhhhhhhcccCcccc
Q 040341 180 GWGVMASHRSGE----TEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 180 g~~~ivs~rsgE----t~d~~iadLAva~~~~~ik~ 211 (251)
|+.+++-.--+. .....-+|+.+.+.+..+-.
T Consensus 196 g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~ 231 (414)
T 3ndn_A 196 GAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDG 231 (414)
T ss_dssp TCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTC
T ss_pred CCEEEEECCCcccccCCchhcCCCeEeccCCccccC
Confidence 998888653321 11122356777666665543
No 254
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=35.94 E-value=1.1e+02 Score=27.00 Aligned_cols=147 Identities=12% Similarity=0.042 Sum_probs=83.8
Q ss_pred cCCCCCcHHHHHHHHHHHHhcCCcc--ceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 25 APNIQESYEGFELLKTAIAKGGYIG--KIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 25 ap~~~~~eeal~~i~~Ai~~aGy~~--kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
.|++..+++.++.+.++++..-|.. .....+--+..+++.. ..-+ + .-+..+.+......+..=.
T Consensus 25 ~p~~~~p~~~~~a~~~~~~~~~y~~~~~~~~~l~~~la~~~~~---~~v~-~---------~~ggt~al~~~l~~l~~gd 91 (424)
T 2po3_A 25 RPNRIDRARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGV---RHAV-A---------TCNATAGLQLLAHAAGLTG 91 (424)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHHTS---SEEE-E---------ESCHHHHHHHHHHHHTCCS
T ss_pred CCCCCChHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhCC---CeEE-E---------eCCHHHHHHHHHHHcCCCC
Confidence 5778888899999999886533432 1111111133334432 1211 1 1134565565555443213
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEc-cc-ccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVG-DD-LLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg-Dd-l~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
-|.+.+|-...-. ...+..|-++..+- |+ -+.-+++.+++++..+ ..+|++ .|-.|.+.+.-+++++|+++|
T Consensus 92 ~Vlv~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~-~~~tG~~~~l~~i~~la~~~~ 165 (424)
T 2po3_A 92 EVIMPSMTFAATP----HALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPR-TSAVVG-VHLWGRPCAADQLRKVADEHG 165 (424)
T ss_dssp EEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTT-EEEEEE-ECGGGCCCCHHHHHHHHHHTT
T ss_pred EEEECCCccHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcC-CcEEEE-ECCCCCcCCHHHHHHHHHHcC
Confidence 6778888765433 33344554443332 21 2345788988887643 445555 345677777788899999999
Q ss_pred CcEEEecCCC
Q 040341 181 WGVMASHRSG 190 (251)
Q Consensus 181 ~~~ivs~rsg 190 (251)
+.+++-.-.+
T Consensus 166 ~~li~Dea~~ 175 (424)
T 2po3_A 166 LRLYFDAAHA 175 (424)
T ss_dssp CEEEEECTTC
T ss_pred CEEEEECccc
Confidence 9888765433
No 255
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=35.87 E-value=2.1e+02 Score=25.50 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=44.4
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCC------CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPF------DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~------~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
.+.++.+.+.+. ++++++-+|+-.- ....|+..+.+.+.+ +++|++--- + +++.+++.++.+.|+.|.+
T Consensus 247 ~~~~~~~~~a~~-l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Gg-i-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 247 DPILTYTAAAAL-LNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY--QGVLIYAGR-Y-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp SHHHHHHHHHHH-HHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC--CSEEEEESS-C-CHHHHHHHHHTTSCSEEEC
T ss_pred CCHHHHHHHHHH-HHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC--CCcEEEeCC-C-CHHHHHHHHHCCCcceehh
Confidence 456676665555 5777765554221 112355556777777 566665552 4 7999999999998887665
No 256
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=35.68 E-value=73 Score=28.43 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=44.9
Q ss_pred hhhC-CceEEEcccccccC--HHHHHHHHhccCcceeEee-ccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCc
Q 040341 123 GKIG-RHVQIVGDDLLVTN--PKRVEKAIKEKTCNALLLK-VNQIGSVTESIEAVKMSKRAGWGVMASHRSGETED 194 (251)
Q Consensus 123 ~~lg-~~~~ivgDdl~vtn--~~~i~~~i~~~a~n~ilIK-~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d 194 (251)
+++| .++.||.|.....+ .+++...++........+. ...--++....++++.+++++..++|+-.-|-+.|
T Consensus 27 ~~~g~~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D 102 (386)
T 1rrm_A 27 KRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQD 102 (386)
T ss_dssp HHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHH
T ss_pred HHcCCCEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHHHH
Confidence 3344 57788887733233 4566665544333333332 22335888999999999999999999876444444
No 257
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=35.07 E-value=96 Score=27.98 Aligned_cols=90 Identities=14% Similarity=0.184 Sum_probs=51.6
Q ss_pred HHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee--ccc-----------cccHHHHHHHHHHHHHcCCcEE
Q 040341 118 HAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK--VNQ-----------IGSVTESIEAVKMSKRAGWGVM 184 (251)
Q Consensus 118 ~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK--~nq-----------iGtlte~l~~~~~a~~~g~~~i 184 (251)
.+++.+..+ .++|+.- .|++++.++++++.+ +++|.+= |+- ..+++...++.+.++..++++|
T Consensus 140 I~~ik~~~p-~v~Vi~G--~v~t~e~A~~a~~aG-AD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVI 215 (366)
T 4fo4_A 140 IRETRAAYP-HLEIIGG--NVATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 215 (366)
T ss_dssp HHHHHHHCT-TCEEEEE--EECSHHHHHHHHHHT-CSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHhcC-CCceEee--eeCCHHHHHHHHHcC-CCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEE
Confidence 345555553 3555432 478899998888765 4555551 211 2234445555566667789988
Q ss_pred EecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 185 ASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 185 vs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
.+..-.... + +--|+++++..+..|..
T Consensus 216 A~GGI~~~~-d--i~kala~GAd~V~vGs~ 242 (366)
T 4fo4_A 216 ADGGIRFSG-D--ISKAIAAGASCVMVGSM 242 (366)
T ss_dssp EESCCCSHH-H--HHHHHHTTCSEEEESTT
T ss_pred EeCCCCCHH-H--HHHHHHcCCCEEEEChH
Confidence 876533322 1 22355566777777754
No 258
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=34.90 E-value=62 Score=27.47 Aligned_cols=51 Identities=6% Similarity=0.062 Sum_probs=33.7
Q ss_pred ccChhhHHHHHHHhhhcCCceeecCC------CCcccHHHHHHHHhhhCCceEEEccc
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIEDP------FDQDDWEHHAELTGKIGRHVQIVGDD 135 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IEDP------~~e~D~~~~~~l~~~lg~~~~ivgDd 135 (251)
..+.+++.+.|.++.++|.++.||=| +.+++ .....+.+.++..+.+|.|-
T Consensus 110 ~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~-~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 110 LPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPG-VTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp CCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTT-EEHHHHHHHTTCEEEEEECS
T ss_pred CCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCccc-chHHHHHHHcCCCEEEEEcC
Confidence 45678888999988789999999975 22221 22344555666566666664
No 259
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=34.76 E-value=1.3e+02 Score=21.81 Aligned_cols=81 Identities=16% Similarity=0.177 Sum_probs=46.2
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+... -.+.++.+. .+.+.+.++++.+ ++.++.||-..
T Consensus 39 ~~~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~---~~~~~~~~~~~~g-~~~~l~kp~~~ 112 (153)
T 3cz5_A 39 DAGEAYRLYRE--TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMH---QGSAFALKAFEAG-ASGYVTKSSDP 112 (153)
T ss_dssp SHHHHHHHHHT--TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC---CSHHHHHHHHHTT-CSEEEETTSCT
T ss_pred CHHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECC---CCHHHHHHHHHCC-CcEEEecCCCH
Confidence 45566555443 3455777765554433 444445544321 134444443 3567777777765 56788999877
Q ss_pred ccHHHHHHH
Q 040341 164 GSVTESIEA 172 (251)
Q Consensus 164 Gtlte~l~~ 172 (251)
..+.++++.
T Consensus 113 ~~L~~~i~~ 121 (153)
T 3cz5_A 113 AELVQAIEA 121 (153)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766666554
No 260
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=34.59 E-value=2.1e+02 Score=24.20 Aligned_cols=152 Identities=11% Similarity=0.057 Sum_probs=83.9
Q ss_pred cCCCCCcHHHHHHHHHHHHh--cCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCc--cChhhHHHHHHHhh-h
Q 040341 25 APNIQESYEGFELLKTAIAK--GGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQK--VSGDGLKNVYRSFI-S 99 (251)
Q Consensus 25 ap~~~~~eeal~~i~~Ai~~--aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~--~s~~elid~~~~l~-~ 99 (251)
.|++..+++.++.+.+++.. .+|.+. ...+--+..+++.. .|.+... + ..-. -+..+.+......+ +
T Consensus 36 ~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~---~~g~~~~-~---~~i~~~~g~~~a~~~~~~~l~~ 107 (391)
T 3dzz_A 36 EMDFKIAPEIMASMEEKLKVAAFGYESV-PAEYYKAVADWEEI---EHRARPK-E---DWCVFASGVVPAISAMVRQFTS 107 (391)
T ss_dssp CCSSCCCHHHHHHHHHHHTTCCCCCBCC-CHHHHHHHHHHHHH---HHSCCCC-G---GGEEEESCHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHhcCcCCCCCC-CHHHHHHHHHHHHH---HhCCCCC-H---HHEEECCCHHHHHHHHHHHhCC
Confidence 45666778999999998864 234321 11111122222211 1110000 0 0011 12456555444433 3
Q ss_pred cCCceeecCCCCcccHHHHHHHHhhhCCceEEEc----ccccccCHHHHHHHHhccCcceeEe-ec-cccccH---HHHH
Q 040341 100 DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG----DDLLVTNPKRVEKAIKEKTCNALLL-KV-NQIGSV---TESI 170 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg----Ddl~vtn~~~i~~~i~~~a~n~ilI-K~-nqiGtl---te~l 170 (251)
.-.-+.+++|-. .+|....+..|.++..+- +.-+.-+++.+++++......+++| -| |-.|++ .+.-
T Consensus 108 ~gd~vl~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~ 183 (391)
T 3dzz_A 108 PGDQILVQEPVY----NMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVK 183 (391)
T ss_dssp TTCEEEECSSCC----HHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHH
T ss_pred CCCeEEECCCCc----HHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHH
Confidence 334677888866 456666666665443321 2223358999999997544555544 34 445666 7888
Q ss_pred HHHHHHHHcCCcEEEecC
Q 040341 171 EAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~r 188 (251)
+++++|+++|+.+++-.-
T Consensus 184 ~i~~~~~~~~~~li~De~ 201 (391)
T 3dzz_A 184 RIAELCAKHQVLLISDEI 201 (391)
T ss_dssp HHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHCCCEEEEecc
Confidence 889999999998888653
No 261
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=34.34 E-value=2.3e+02 Score=24.52 Aligned_cols=94 Identities=6% Similarity=-0.123 Sum_probs=58.2
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcce-eEe-eccc-cc
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA-LLL-KVNQ-IG 164 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~-ilI-K~nq-iG 164 (251)
.+.+......+ .-.-|.+.+|-...-+..|. ..+..|-++..+ .+++.++++ . ....+ +.+ -||- .|
T Consensus 86 t~a~~~~~~~~-~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v------~d~~~l~~~-~-~~~~~~v~~~~p~nptG 155 (374)
T 2aeu_A 86 SSAILATILAL-KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES------DKVGEILNK-I-DKDTLVIITGSTMDLKV 155 (374)
T ss_dssp HHHHHHHHHHH-CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE------SCHHHHHTT-C-CTTEEEEEECBCTTSCB
T ss_pred HHHHHHHHHhC-CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe------CCHHHHHhc-C-CCccEEEEEccCCCCCC
Confidence 34444444444 32366788885444333343 445556555555 367888776 3 33455 555 3543 45
Q ss_pred -cHHHHHHHHHHHHHcCCcEEEecCCCC
Q 040341 165 -SVTESIEAVKMSKRAGWGVMASHRSGE 191 (251)
Q Consensus 165 -tlte~l~~~~~a~~~g~~~ivs~rsgE 191 (251)
++.+.-++.++|+++|..+++-...++
T Consensus 156 ~~~~~l~~i~~l~~~~~~~li~De~~~~ 183 (374)
T 2aeu_A 156 IELENFKKVINTAKNKEAIVFVDDASGA 183 (374)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECTTHH
T ss_pred CCcccHHHHHHHHHHcCCEEEEECCccc
Confidence 799999999999999999988775443
No 262
>1a76_A Flap endonuclease-1 protein; 5'-3' EXO/endo nuclease, DNA replication, RTH, RAD27, DNA repair; 2.00A {Methanocaldococcus jannaschii} SCOP: a.60.7.1 c.120.1.2 PDB: 1a77_A
Probab=34.27 E-value=34 Score=30.19 Aligned_cols=109 Identities=15% Similarity=0.126 Sum_probs=67.4
Q ss_pred hHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHH
Q 040341 89 GLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTE 168 (251)
Q Consensus 89 elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte 168 (251)
++++..+++++.++|-+|+-|- |-| +.-+.|.++ |..+.|+..|. + ....+ +..++.+...-|.-.+
T Consensus 130 ~~~~~~~~lL~~~gi~~i~apg-EAD-~~ia~La~~-g~~~~I~S~D~------D---ll~~~-~~~v~~~~~~~~~~~~ 196 (326)
T 1a76_A 130 KMVENCKYLLSLMGIPYVEAPS-EGE-AQASYMAKK-GDVWAVVSQDY------D---ALLYG-APRVVRNLTTTKEMPE 196 (326)
T ss_dssp HHHHHHHHHHHHHTCCEEECSS-CHH-HHHHHHHHT-TSSSEEECSSS------G---GGGGT-CSEEEESSSSCSSCCE
T ss_pred HHHHHHHHHHHHcCCCeEECCc-cHH-HHHHHHHHC-CCEEEEecCCc------c---cceec-CCEEEEeecCCCCceE
Confidence 3688999999999999999998 444 455666655 54566776541 1 11222 3445555543332111
Q ss_pred HHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHH
Q 040341 169 SIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLA 221 (251)
Q Consensus 169 ~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~a 221 (251)
.++.-++..+.|+ .-.-+.|+++=+|+.++.-|-|.=|+.+|
T Consensus 197 ~~~~~~v~~~~gl-----------~~~q~id~~~L~GsD~~p~GvpGiG~ktA 238 (326)
T 1a76_A 197 LIELNEVLEDLRI-----------SLDDLIDIAIFMGTDYNPGGVKGIGFKRA 238 (326)
T ss_dssp EEEHHHHHHHHTC-----------CHHHHHHHHHHHCCTTSTTTTTTCCHHHH
T ss_pred EEEHHHHHHHcCC-----------CHHHHHHHHHHcCCCCCCCCCCCcCHHHH
Confidence 2233334445554 24678899999999998867776677655
No 263
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=34.26 E-value=1.4e+02 Score=21.89 Aligned_cols=81 Identities=11% Similarity=0.130 Sum_probs=43.6
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhh-CC--ceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKI-GR--HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~l-g~--~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+.- .. .+.++... .+.+.+.++.+.+ ++.++.||-
T Consensus 39 ~~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~---~~~~~~~~~~~~g-~~~~l~KP~ 112 (154)
T 3gt7_A 39 NGREAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL---SDPRDVVRSLECG-ADDFITKPC 112 (154)
T ss_dssp SHHHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC---CSHHHHHHHHHHC-CSEEEESSC
T ss_pred CHHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC---CChHHHHHHHHCC-CCEEEeCCC
Confidence 34565554433 3455777766555444 33333443321 01 33333332 3567777787776 567899997
Q ss_pred ccccHHHHHHH
Q 040341 162 QIGSVTESIEA 172 (251)
Q Consensus 162 qiGtlte~l~~ 172 (251)
....+.++++.
T Consensus 113 ~~~~l~~~i~~ 123 (154)
T 3gt7_A 113 KDVVLASHVKR 123 (154)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 65555555443
No 264
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=34.10 E-value=1.7e+02 Score=25.15 Aligned_cols=100 Identities=19% Similarity=0.185 Sum_probs=62.1
Q ss_pred hhhHHHHHHHhh-hcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cc--cccccCHHHHHHHHhccCcceeEe-ecc
Q 040341 87 GDGLKNVYRSFI-SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GD--DLLVTNPKRVEKAIKEKTCNALLL-KVN 161 (251)
Q Consensus 87 ~~elid~~~~l~-~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gD--dl~vtn~~~i~~~i~~~a~n~ilI-K~n 161 (251)
..+.+......+ +.=.-|.+++|-. ..|....+..|.++..+ .| +-+.-+++.+++++..+ ...+++ -||
T Consensus 100 ~~~al~~~~~~l~~~gd~Vlv~~p~y----~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~ 174 (385)
T 1b5p_A 100 GSQALFNLFQAILDPGDEVIVLSPYW----VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR-TKALVVNSPN 174 (385)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCC----THHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT-EEEEEEESSC
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCc----hhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC-CEEEEEeCCC
Confidence 456666555533 3223678888965 35666666666554333 22 12345789998887654 344444 554
Q ss_pred c-cccH---HHHHHHHHHHHHcCCcEEEecCCCC
Q 040341 162 Q-IGSV---TESIEAVKMSKRAGWGVMASHRSGE 191 (251)
Q Consensus 162 q-iGtl---te~l~~~~~a~~~g~~~ivs~rsgE 191 (251)
. .|++ .+..+++++|+++|..+++-.-.++
T Consensus 175 NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 208 (385)
T 1b5p_A 175 NPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208 (385)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 4 5664 6778889999999998887654433
No 265
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=33.97 E-value=1.8e+02 Score=24.93 Aligned_cols=98 Identities=17% Similarity=0.084 Sum_probs=59.8
Q ss_pred hhhHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-c------ccccccCHHHHHHHHhccCcceeEe
Q 040341 87 GDGLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-G------DDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 87 ~~elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-g------Ddl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
..+.+..... +++.-.-+.+++|-+. +|....+..|.++..+ - ++-+.-+++.+++++..+..-.++.
T Consensus 111 ~~~a~~~~~~~l~~~gd~vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~ 186 (407)
T 3nra_A 111 TQGALFLAVAATVARGDKVAIVQPDYF----ANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFS 186 (407)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCCT----HHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEE
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCccc----chHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEc
Confidence 3455554443 3333346778888664 4666666666554333 2 2335568999999987744333444
Q ss_pred eccc-ccc---HHHHHHHHHHHHHcCCcEEEecC
Q 040341 159 KVNQ-IGS---VTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 159 K~nq-iGt---lte~l~~~~~a~~~g~~~ivs~r 188 (251)
-|+. .|+ ..+.-+++++|+++|+.+++-.-
T Consensus 187 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea 220 (407)
T 3nra_A 187 NPNNPAGVVYSAEEIGQIAALAARYGATVIADQL 220 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 5543 343 34577888999999998888543
No 266
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=33.90 E-value=37 Score=26.79 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=35.7
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhh
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
+-++|=.++-|.-.+++++++.|++.|.+++.=....++.-...+|..+
T Consensus 117 ~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l 165 (198)
T 2xbl_A 117 GDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLL 165 (198)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEE
Confidence 3456667888888999999999999999886555445555555566554
No 267
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=33.51 E-value=1.8e+02 Score=26.08 Aligned_cols=69 Identities=4% Similarity=-0.038 Sum_probs=43.4
Q ss_pred cChhhHHHHHHHhhhcCCceeecCCC-------CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeE
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDPF-------DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 157 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP~-------~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~il 157 (251)
.+.++.+.+.+. ++++++-+|+-.- .-.+|+.-+.+.+.+ +++|++--- ++ ++.++++++.+.|+.|.
T Consensus 252 ~~~~~~~~la~~-le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~--~iPvi~~Gg-i~-~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 252 EPEAMAFYLAGE-LDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRF--KGGLIYCGN-YD-AGRAQARLDDNTADAVA 326 (377)
T ss_dssp CHHHHHHHHHHH-HHHTTCSEEEEECCC------CCCTTHHHHHHHHC--CSEEEEESS-CC-HHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHH-HHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHC--CCCEEEECC-CC-HHHHHHHHHCCCceEEe
Confidence 456676665555 5777765554211 111455556677777 456665542 44 99999999998888776
Q ss_pred e
Q 040341 158 L 158 (251)
Q Consensus 158 I 158 (251)
+
T Consensus 327 i 327 (377)
T 2r14_A 327 F 327 (377)
T ss_dssp E
T ss_pred e
Confidence 5
No 268
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=33.41 E-value=79 Score=25.81 Aligned_cols=40 Identities=13% Similarity=0.094 Sum_probs=22.3
Q ss_pred ccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 150 EKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 150 ~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
...++++++-+..........+.++.+++.|+++++-.+.
T Consensus 69 ~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 108 (298)
T 3tb6_A 69 SQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINAS 108 (298)
T ss_dssp HTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSC
T ss_pred HCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecC
Confidence 3456777775543321122334556667778887665544
No 269
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=32.88 E-value=23 Score=25.27 Aligned_cols=39 Identities=18% Similarity=0.193 Sum_probs=27.7
Q ss_pred CCCCcccccCCC--CCcHHHHHHHHHHHHhcCCc-cceeeee
Q 040341 17 NVGDEGGFAPNI--QESYEGFELLKTAIAKGGYI-GKIVIGM 55 (251)
Q Consensus 17 ~vgdeGGfap~~--~~~eeal~~i~~Ai~~aGy~-~kI~igl 55 (251)
-.|..-+|..++ .+.+||+++.+...+.+||+ .+|.+..
T Consensus 40 veg~~~s~EVPV~A~sLdEAlE~AE~eYeeaGF~V~RVRPev 81 (84)
T 2lmc_A 40 VESSEHSFEVPIYAETLDEALELAEWQYVPAGFEVTRVRPCV 81 (84)
T ss_dssp EECSSCEEEEEECCSSHHHHHHHHHHTTGGGTCEEEEEEEEC
T ss_pred EecccceEEEeeecccHHHHHHHHHHHhhhccceEEEecccc
Confidence 334444554432 78999999999889999998 4677653
No 270
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=32.81 E-value=2.3e+02 Score=24.04 Aligned_cols=119 Identities=14% Similarity=0.164 Sum_probs=73.2
Q ss_pred ccccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccC-hhhHHHHHHHhhhc
Q 040341 22 GGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVS-GDGLKNVYRSFISD 100 (251)
Q Consensus 22 GGfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s-~~elid~~~~l~~~ 100 (251)
|+..+++ +.++....|..++....+ .+|+ =+ .+ +..+| ..+.++...+.+++
T Consensus 74 ~~L~~~~-s~~ei~~~l~~al~~vP~----a~Gv--------------nN--Hm------GS~~T~~~~~m~~vm~~l~~ 126 (245)
T 2nly_A 74 SGITSNL-SVGEVKSRVRKAFDDIPY----AVGL--------------NN--HM------GSKIVENEKIMRAILEVVKE 126 (245)
T ss_dssp CCBCTTC-CHHHHHHHHHHHHHHSTT----CCEE--------------EE--EE------CTTGGGCHHHHHHHHHHHHH
T ss_pred ccCcCCC-CHHHHHHHHHHHHHHCCC----cEEE--------------ec--cc------ccchhcCHHHHHHHHHHHHH
Confidence 3455555 468888888998875544 1222 11 22 23444 34456777777899
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCC---ceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHH
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGR---HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK 177 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~---~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~ 177 (251)
+++.++-+--...- . -.++.++.|= +-.|..|+ ...++..|++.+ -+++++|+
T Consensus 127 ~gL~fvDS~Ts~~S-~-a~~~A~~~gvp~~~rdvFLD~-~~~~~~~I~~ql---------------------~~a~~~A~ 182 (245)
T 2nly_A 127 KNAFIIDSGTSPHS-L-IPQLAEELEVPYATRSIFLDN-THSSRKEVIKNM---------------------RKLAKKAK 182 (245)
T ss_dssp TTCEEEECCCCSSC-S-HHHHHHHTTCCEEECCEESCC-TTCCHHHHHHHH---------------------HHHHHHHH
T ss_pred CCCEEEcCCCCccc-H-HHHHHHHcCCCeEEeeEECCC-CCCCHHHHHHHH---------------------HHHHHHHh
Confidence 99888876654332 2 2244455532 22356776 246666666543 36788999
Q ss_pred HcCCcEEEecCCCC
Q 040341 178 RAGWGVMASHRSGE 191 (251)
Q Consensus 178 ~~g~~~ivs~rsgE 191 (251)
++|.-++|||--.+
T Consensus 183 ~~G~aIaIGhp~p~ 196 (245)
T 2nly_A 183 QGSEPIGIGHVGVR 196 (245)
T ss_dssp TTSCCEEEEECSTT
T ss_pred hcCcEEEEECCCCC
Confidence 99999999997555
No 271
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=32.79 E-value=2e+02 Score=24.91 Aligned_cols=88 Identities=14% Similarity=0.141 Sum_probs=57.5
Q ss_pred HHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccc--cccHHHHH
Q 040341 93 VYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ--IGSVTESI 170 (251)
Q Consensus 93 ~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nq--iGtlte~l 170 (251)
.+..++..-..|.+++|.+..-+.++. ..|.++ +.-+ ..+++.+++.+......++++-+.+ .|.+...-
T Consensus 135 ~l~~~~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~--~~~~--~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~ 206 (409)
T 3kki_A 135 LLQTICQPNTNVYIDFFAHMSLWEGAR----YANAQA--HPFM--HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLA 206 (409)
T ss_dssp HHHHHCCTTCEEEEETTSCHHHHHHHH----HTTCEE--EEEC--TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHH
T ss_pred HHHHhcCCCCEEEECCCcCHHHHHHHH----HcCCeE--EEec--CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHH
Confidence 444555555588899998755444432 333333 2222 1468999999886545677776533 57666677
Q ss_pred HHHHHHHHcCCcEEEecC
Q 040341 171 EAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~r 188 (251)
+++++|+++|+.+++-.-
T Consensus 207 ~l~~la~~~~~~li~De~ 224 (409)
T 3kki_A 207 ELVNISKEFGCALLVDES 224 (409)
T ss_dssp HHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHcCCEEEEECC
Confidence 888999999998887653
No 272
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=32.57 E-value=21 Score=32.20 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=40.2
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcC-CcEEEecCCCCCCchhHhhhhhhccc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAG-WGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g-~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+.++|=.+|-|.-.|++++++.|++.| ..++.=....++.-...+|..+-+.+
T Consensus 101 ~~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~~~~ 155 (372)
T 3tbf_A 101 DGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKA 155 (372)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEECCC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeeeecC
Confidence 4567788899999999999999999999 76655444556655666666555544
No 273
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=32.40 E-value=87 Score=21.38 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=36.4
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEeecccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 163 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi 163 (251)
+.++.++.+.+ ..+.++.+.-.+...| ++-...+.+.-. -++.++.... +.. ..+... .++.++.||-..
T Consensus 33 ~~~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~---~~~--~~~~~~-g~~~~l~Kp~~~ 104 (116)
T 3a10_A 33 NGEEALKKFFS--GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYS---HYR--SDMSSW-AADEYVVKSFNF 104 (116)
T ss_dssp SHHHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCG---GGG--GCGGGG-GSSEEEECCSST
T ss_pred CHHHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCc---chH--HHHHhc-cccceEECCCCH
Confidence 34555554443 3445666655454333 333344443321 1333333221 111 233333 457789999876
Q ss_pred ccHHHHHH
Q 040341 164 GSVTESIE 171 (251)
Q Consensus 164 Gtlte~l~ 171 (251)
..+.++++
T Consensus 105 ~~l~~~i~ 112 (116)
T 3a10_A 105 DELKEKVK 112 (116)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655554
No 274
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=32.11 E-value=2.3e+02 Score=23.87 Aligned_cols=149 Identities=15% Similarity=0.092 Sum_probs=80.1
Q ss_pred CCCCCcHHHHHHHHHHHHh--cCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCC--ccChhhHHHHHHHhhhc-
Q 040341 26 PNIQESYEGFELLKTAIAK--GGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQ--KVSGDGLKNVYRSFISD- 100 (251)
Q Consensus 26 p~~~~~eeal~~i~~Ai~~--aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~--~~s~~elid~~~~l~~~- 100 (251)
+++..+++.++.+.++++. .+|.+ -...+--+..+++.. .|.+.... ..- .-+..+.+......+-+
T Consensus 33 ~~~~~~~~v~~a~~~~~~~~~~~y~~-~~~~lr~~la~~~~~---~~~~~~~~----~~i~~t~g~~~a~~~~~~~~~~~ 104 (377)
T 3fdb_A 33 SDFSTCPAVLQAITDAVQREAFGYQP-DGSLLSQATAEFYAD---RYGYQARP----EWIFPIPDVVRGLYIAIDHFTPA 104 (377)
T ss_dssp CCSCCCHHHHHHHHHHHHTTCCSSCC-SSCCHHHHHHHHHHH---HHCCCCCG----GGEEEESCHHHHHHHHHHHHSCT
T ss_pred CCCCCCHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHHHHH---HhCCCCCH----HHEEEeCChHHHHHHHHHHhcCC
Confidence 5556678899999998864 23432 111111233334331 11110000 000 11345655555444433
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEeeccc-ccc---HHHHHHHHHH
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-IGS---VTESIEAVKM 175 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq-iGt---lte~l~~~~~ 175 (251)
-.-+.+++|-.. +|....+..|.++..+ .|+ . -+++.+++++..+..=.++.-|+. .|+ ..+.-+++++
T Consensus 105 gd~vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~-~-~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 178 (377)
T 3fdb_A 105 QSKVIVPTPAYP----PFFHLLSATQREGIFIDATG-G-INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDL 178 (377)
T ss_dssp TCCEEEEESCCT----HHHHHHHHHTCCEEEEECTT-S-CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHH
T ss_pred CCEEEEcCCCcH----hHHHHHHHcCCEEEEccCCC-C-CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 236677888664 3555555555444333 232 2 578999999887643333444532 343 3477888899
Q ss_pred HHHcCCcEEEecC
Q 040341 176 SKRAGWGVMASHR 188 (251)
Q Consensus 176 a~~~g~~~ivs~r 188 (251)
|+++|+.+++-.-
T Consensus 179 ~~~~~~~li~De~ 191 (377)
T 3fdb_A 179 AHRYDARVLVDEI 191 (377)
T ss_dssp HHHTTCEEEEECT
T ss_pred HHHcCCEEEEEcc
Confidence 9999998887653
No 275
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=32.11 E-value=33 Score=32.02 Aligned_cols=57 Identities=19% Similarity=0.082 Sum_probs=43.8
Q ss_pred ccccccCHHHHHHHHhcc---CcceeEeeccccc--cHHHHHHHHHHHHHcCCcEEEecCCC
Q 040341 134 DDLLVTNPKRVEKAIKEK---TCNALLLKVNQIG--SVTESIEAVKMSKRAGWGVMASHRSG 190 (251)
Q Consensus 134 Ddl~vtn~~~i~~~i~~~---a~n~ilIK~nqiG--tlte~l~~~~~a~~~g~~~ivs~rsg 190 (251)
|+..-.+++.++++|++. ..-.|+.-|+-.| .+...-+++++|+++|+.++|-.--|
T Consensus 177 ~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G 238 (450)
T 3bc8_A 177 GDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYG 238 (450)
T ss_dssp TTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTT
T ss_pred CccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCc
Confidence 333567899999999763 2334666677777 67889999999999999999986544
No 276
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=31.98 E-value=91 Score=21.74 Aligned_cols=79 Identities=15% Similarity=0.069 Sum_probs=40.2
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhh-CCceEEE--cccccccCHHHHHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKI-GRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~l-g~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++.+.+ ..+.++.+.-.+...| ++-...+.+.- ...++|+ .+.. +... .++...+ ++.++.||-
T Consensus 35 ~~~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~---~~~~-~~~~~~g-~~~~l~KP~ 107 (127)
T 3i42_A 35 SGTDALHAMST--RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA---KNDL-GKEACEL-FDFYLEKPI 107 (127)
T ss_dssp SHHHHHHHHHH--SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC----CTTC-CHHHHHH-CSEEEESSC
T ss_pred CHHHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc---chhH-HHHHHHh-hHHheeCCC
Confidence 45566665544 3455777765555444 33344444431 2234443 3321 1222 3445555 778999998
Q ss_pred ccccHHHHHH
Q 040341 162 QIGSVTESIE 171 (251)
Q Consensus 162 qiGtlte~l~ 171 (251)
....+.+++.
T Consensus 108 ~~~~L~~~i~ 117 (127)
T 3i42_A 108 DIASLEPILQ 117 (127)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6555544443
No 277
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.64 E-value=1.4e+02 Score=21.15 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=39.3
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhh-hCCceEEEcccccccC---HHHHH-HHHhccCcceeEee
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGK-IGRHVQIVGDDLLVTN---PKRVE-KAIKEKTCNALLLK 159 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~-lg~~~~ivgDdl~vtn---~~~i~-~~i~~~a~n~ilIK 159 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+. ....++|+ .+|+ ...+. .+.+ ..++.++.|
T Consensus 38 ~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii----~~s~~~~~~~~~~~~~~-~g~~~~l~k 110 (140)
T 3grc_A 38 SAAQALEQVAR--RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIV----VVSANAREGELEFNSQP-LAVSTWLEK 110 (140)
T ss_dssp SHHHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEE----EECTTHHHHHHHHCCTT-TCCCEEECS
T ss_pred CHHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEE----EEecCCChHHHHHHhhh-cCCCEEEeC
Confidence 44566665543 4555777766665444 3334444441 22345554 2232 22333 3333 356788999
Q ss_pred ccccccHHHHH
Q 040341 160 VNQIGSVTESI 170 (251)
Q Consensus 160 ~nqiGtlte~l 170 (251)
|-....+.+++
T Consensus 111 P~~~~~l~~~i 121 (140)
T 3grc_A 111 PIDENLLILSL 121 (140)
T ss_dssp SCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 97554444443
No 278
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=31.28 E-value=1e+02 Score=27.08 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=66.6
Q ss_pred CceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccccHHHHHHHHHHHHHc
Q 040341 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 102 pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtlte~l~~~~~a~~~ 179 (251)
.-+.+.+|.+..-+..+..+.+..|-++..+ | +.+++.+++++..+ ...|.+- | |-.|.+...-++.++|+++
T Consensus 106 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~---~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~ 180 (392)
T 3qhx_A 106 DHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV-A---LADLDAVRAAIRPT-TRLIWVETPTNPLLSIADIAGIAQLGADS 180 (392)
T ss_dssp CEEEEETTCCHHHHHHHHHTGGGGTCEEEEE-C---TTCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CEEEEeCCCcchHHHHHHHHHHhcCcEEEEe-C---CCCHHHHHHhhCCC-CeEEEEECCCCCCcEEecHHHHHHHHHHc
Confidence 3566677777655556655556666554433 2 23789999888653 3344443 3 5578888888899999999
Q ss_pred CCcEEEecCCCCC----CchhHhhhhhhcccCcccc
Q 040341 180 GWGVMASHRSGET----EDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 180 g~~~ivs~rsgEt----~d~~iadLAva~~~~~ik~ 211 (251)
|+.+++-.-.+.. ....-+|+.+.+...++-.
T Consensus 181 g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 216 (392)
T 3qhx_A 181 SAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGG 216 (392)
T ss_dssp TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTC
T ss_pred CCEEEEECCCcccccCChHHhCCcEEEEcCccccCC
Confidence 9998887643221 1123367777666665544
No 279
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=31.24 E-value=1e+02 Score=20.16 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=24.6
Q ss_pred cCcceeEeeccccccHHHHHHHHHHHHHcCCc
Q 040341 151 KTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182 (251)
Q Consensus 151 ~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~ 182 (251)
..-..++|+.-+--.....++++..|+++|+.
T Consensus 43 ~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~ 74 (74)
T 2jwk_A 43 DNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK 74 (74)
T ss_dssp CTTCCEEEEECTTSCHHHHHHHHHHHHHTTCC
T ss_pred CCCceEEEEcCCCCCHHHHHHHHHHHHHcCCC
Confidence 33456888888777888888888889988863
No 280
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=31.22 E-value=35 Score=30.59 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=37.6
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
.+.++|=.+|-|.-.+++++++.|++.|..++.=....++.-...+|..+-+.
T Consensus 107 ~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~ 159 (375)
T 2zj3_A 107 RDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHIN 159 (375)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEECC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeeeec
Confidence 45577778999999999999999999998775544445554455555544443
No 281
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=31.17 E-value=85 Score=26.27 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=44.8
Q ss_pred HHHHHHHHhccCccee--Eeecccc---ccHHHHHHHHHHHHHcCCcEEEecC-------CCCCCc--hhHhhhhhhccc
Q 040341 141 PKRVEKAIKEKTCNAL--LLKVNQI---GSVTESIEAVKMSKRAGWGVMASHR-------SGETED--TFIADLSVGLAT 206 (251)
Q Consensus 141 ~~~i~~~i~~~a~n~i--lIK~nqi---Gtlte~l~~~~~a~~~g~~~ivs~r-------sgEt~d--~~iadLAva~~~ 206 (251)
.+.++++++.|+ +.| .+-.+-. .-+.++.++++.|++.|.++++-.. .+-+.+ ..++..|...++
T Consensus 102 ~~~v~~a~~~Ga-~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Ga 180 (273)
T 2qjg_A 102 VTTVEEAIRMGA-DAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGA 180 (273)
T ss_dssp CSCHHHHHHTTC-SEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC-CEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCC
Confidence 566777887764 555 2222211 1123456677888888999887430 111211 223466778888
Q ss_pred CccccCCCCchhH
Q 040341 207 GQIKTGAPCRSER 219 (251)
Q Consensus 207 ~~ik~G~~~r~Er 219 (251)
.+++++.+..-++
T Consensus 181 d~i~~~~~~~~~~ 193 (273)
T 2qjg_A 181 DIVKTSYTGDIDS 193 (273)
T ss_dssp SEEEECCCSSHHH
T ss_pred CEEEECCCCCHHH
Confidence 9999985444343
No 282
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=31.16 E-value=1.3e+02 Score=26.18 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=63.6
Q ss_pred hhhHHHHHHHhh--hcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhcc--CcceeEeecc
Q 040341 87 GDGLKNVYRSFI--SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEK--TCNALLLKVN 161 (251)
Q Consensus 87 ~~elid~~~~l~--~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~--a~n~ilIK~n 161 (251)
..+.+......+ ..-.-+.+.+|-...-...|.. .|.++..+ .|+-+.-+++.+++++... ...+|++= |
T Consensus 56 gt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~-~ 130 (394)
T 1o69_A 56 ATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY----LKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILT-H 130 (394)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH----TTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEE-C
T ss_pred HHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHH----cCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEE-C
Confidence 456555554443 2223677888888777666653 34344333 2332455899999988753 35556654 4
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
-.|++.+.-++.++|+++|+.+++-.-.
T Consensus 131 ~~G~~~~l~~i~~l~~~~~~~li~Dea~ 158 (394)
T 1o69_A 131 LYGNAAKMDEIVEICKENDIVLIEDAAE 158 (394)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCChhhHHHHHHHHHHcCCEEEEECcC
Confidence 6788888889999999999988876543
No 283
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=31.15 E-value=1.3e+02 Score=27.47 Aligned_cols=97 Identities=12% Similarity=0.046 Sum_probs=62.2
Q ss_pred hhhHHHHHHHhhhcC---------CceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCccee
Q 040341 87 GDGLKNVYRSFISDH---------PIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNAL 156 (251)
Q Consensus 87 ~~elid~~~~l~~~y---------pI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~i 156 (251)
..+.+......+.++ +.+.+.+|-+. +|.+..+..|-++..| -|+-+..+++.+++++..+ ..+|
T Consensus 169 gt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~----~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~-~~~v 243 (514)
T 3mad_A 169 GTESLLLAMKTYRDWARATKGITAPEAVVPVSAHA----AFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPN-TVVV 243 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCT----HHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTT-EEEE
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccch----HHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccC-CEEE
Confidence 455555554444332 56777777664 3666666666555444 2433455899999998764 3344
Q ss_pred Eeec-c-ccccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 157 LLKV-N-QIGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 157 lIK~-n-qiGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
++-. + -.|.+...-++.++|+++|+.+++-.-
T Consensus 244 ~~~~~~nptG~~~~l~~i~~la~~~~i~livDea 277 (514)
T 3mad_A 244 AGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDAC 277 (514)
T ss_dssp EEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred EEeCCCCCCccccCHHHHHHHHHHhCCeEEEecc
Confidence 4443 2 367777777888999999999988764
No 284
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=31.10 E-value=54 Score=29.50 Aligned_cols=28 Identities=18% Similarity=0.367 Sum_probs=17.5
Q ss_pred CCcHHHHHHHHHHHHhcCCccceeeeeehh
Q 040341 29 QESYEGFELLKTAIAKGGYIGKIVIGMDVA 58 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~kI~iglD~A 58 (251)
.+.+...+++..| +++||+. |.+.+|+.
T Consensus 143 ~d~~~~~~~~~ra-~~aG~~a-i~it~d~p 170 (368)
T 2nli_A 143 KDDQQNRDILDEA-KSDGATA-IILTADST 170 (368)
T ss_dssp SSHHHHHHHHHHH-HHTTCSC-EEEESBCC
T ss_pred CCHHHHHHHHHHH-HHCCCCE-EEEcCCCC
Confidence 3556667777776 6889852 45555653
No 285
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=31.04 E-value=35 Score=30.44 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=35.7
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGL 204 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~ 204 (251)
.+.++|=.+|-|.-.+++++++.|++.|..++.=....++.-...+|..+-+
T Consensus 97 ~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~ 148 (367)
T 2poc_A 97 RDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHI 148 (367)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEEC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEc
Confidence 3456777899999999999999999999877544444444444444444433
No 286
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.02 E-value=39 Score=30.18 Aligned_cols=54 Identities=22% Similarity=0.284 Sum_probs=39.7
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHc-CCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRA-GWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~-g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
.+.++|=.+|-|.-.+++++++.|++. |..++.=....++.-...+|..+-+.+
T Consensus 97 ~~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~~~~ 151 (373)
T 2aml_A 97 HLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGS 151 (373)
T ss_dssp TCCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEECSC
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCcceecCC
Confidence 345677789999999999999999999 987765555556655666665554433
No 287
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=30.83 E-value=32 Score=28.82 Aligned_cols=44 Identities=18% Similarity=0.132 Sum_probs=33.3
Q ss_pred HHHHHhccCcceeEeeccccccHHHHHHHHHHHH--HcCCcEEEec
Q 040341 144 VEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSK--RAGWGVMASH 187 (251)
Q Consensus 144 i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~--~~g~~~ivs~ 187 (251)
.++.+-...++++++=|+-+||+.|.++++.++| .++.++++=.
T Consensus 97 ~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~ 142 (216)
T 1ydh_A 97 ERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLN 142 (216)
T ss_dssp HHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEEC
T ss_pred HHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEec
Confidence 4455555578999999999999999999988765 4566665443
No 288
>3lfj_A Manxb, phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component...; manxb PTS; 1.56A {Thermoanaerobacter tengcongensis}
Probab=30.82 E-value=21 Score=29.48 Aligned_cols=45 Identities=11% Similarity=-0.011 Sum_probs=36.6
Q ss_pred CCCccChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhC
Q 040341 81 GSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIG 126 (251)
Q Consensus 81 ~~~~~s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg 126 (251)
.+.+.+.+| ++.+++|.++|++-..-|....+--..|.++.++++
T Consensus 139 ~~V~v~~ed-~~~lk~L~~~~Gv~v~~q~vP~d~~~~~~~~lkk~~ 183 (187)
T 3lfj_A 139 QSVSLSEDE-VKTLLELKTKYNVDVYLQMIPDSEKIHLTTVVEKYF 183 (187)
T ss_dssp SSBEECHHH-HHHHHHHHHHHCCEEEECSSTTSCCEEHHHHHHHHS
T ss_pred ccEeeCHHH-HHHHHHHHhccCCEEEEEECCCCChhcHHHHHHhhh
Confidence 356788999 688999888889888888888887778888877774
No 289
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=30.70 E-value=25 Score=26.32 Aligned_cols=40 Identities=23% Similarity=0.428 Sum_probs=27.3
Q ss_pred CcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCc-----eeecCCCCcc-cH
Q 040341 67 DKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPI-----VSIEDPFDQD-DW 115 (251)
Q Consensus 67 ~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI-----~~IEDP~~e~-D~ 115 (251)
.|.|.+. ....-|..|||++|.. ..-|| +.+-.|+... +|
T Consensus 70 ~g~y~~~-------~~~F~sl~eLV~~y~~--~~~~i~~~~~~~L~~Pv~r~~~W 115 (116)
T 2kk6_A 70 DNMYRFE-------GTGFSNIPQLIDHHYT--TKQVITKKSGVVLLNPIPKDKKW 115 (116)
T ss_dssp TTEEESS-------SCEESCHHHHHHHHHH--TTCCSCTTTTCCCCSCCCCCCCC
T ss_pred CCEEEEC-------CCEeCCHHHHHHHHhh--CCCCccCCCCCeECcccCCCCCC
Confidence 3667654 2345688999999986 44443 4578888876 65
No 290
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=30.35 E-value=47 Score=29.19 Aligned_cols=70 Identities=19% Similarity=0.228 Sum_probs=45.5
Q ss_pred HHHHHhccCcceeEeeccc-----cccHHHHHHHHHHHHHcCCcEEEecCCC---CCCch---hHhhhhhhcccCccccC
Q 040341 144 VEKAIKEKTCNALLLKVNQ-----IGSVTESIEAVKMSKRAGWGVMASHRSG---ETEDT---FIADLSVGLATGQIKTG 212 (251)
Q Consensus 144 i~~~i~~~a~n~ilIK~nq-----iGtlte~l~~~~~a~~~g~~~ivs~rsg---Et~d~---~iadLAva~~~~~ik~G 212 (251)
++.+++.++ +++-+-.|- --.+.++-++++.|++.|+.+|+-...| .+... ..+.+|+.+++.++|+.
T Consensus 131 ve~Av~~GA-daV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 131 MDDAVRLNS-CAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHHHTTC-SEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHCCC-CEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 455666653 444444331 1256667788889999999998833222 12222 36789999999999998
Q ss_pred CC
Q 040341 213 AP 214 (251)
Q Consensus 213 ~~ 214 (251)
-+
T Consensus 210 ~t 211 (295)
T 3glc_A 210 YV 211 (295)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 291
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=30.29 E-value=70 Score=27.97 Aligned_cols=116 Identities=13% Similarity=0.109 Sum_probs=69.1
Q ss_pred hHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-ccccc
Q 040341 89 GLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGS 165 (251)
Q Consensus 89 elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGt 165 (251)
+.+..... ++..=.-+.+.+|-+..-+..|..+.+..|-++..+ + +.+++.+++++..+ ...+++- | |-.|.
T Consensus 90 ~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~---~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 90 SAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV-D---AAKPEEIRAAMRPE-TKVVYIETPANPTLS 164 (398)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE-C---TTSHHHHHHHCCTT-EEEEEEESSBTTTTB
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEe-C---CCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 44444333 333323677788887666666765556665444333 2 23789999888653 3445443 3 44688
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCCCCC----CchhHhhhhhhcccCcc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRSGET----EDTFIADLSVGLATGQI 209 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rsgEt----~d~~iadLAva~~~~~i 209 (251)
+.+.-+++++|+++|+.+++-.-.+.- ...+-+|+.+.+....+
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~ 212 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYI 212 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTT
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccc
Confidence 888888999999999988876543321 11122455555555544
No 292
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=30.25 E-value=1.6e+02 Score=22.67 Aligned_cols=82 Identities=11% Similarity=0.190 Sum_probs=48.5
Q ss_pred ccChhhHHHHHHHhhhcC-C--ce--eecCCCCc---ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcce
Q 040341 84 KVSGDGLKNVYRSFISDH-P--IV--SIEDPFDQ---DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA 155 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~y-p--I~--~IEDP~~e---~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ 155 (251)
..|.+.+.+.+.+++.+. + ++ +.+....- ++..+|.+|.+.+ +.+..+.
T Consensus 22 ~~sl~~Q~~~~~~~a~~~~g~~~~~~~~D~g~Sg~~~~~Rp~l~~ll~~~-----------------------~~g~id~ 78 (169)
T 3g13_A 22 LNSYKSQVQYYTDMIKKNKEWVLADIYADEAITGTQVTKREDFQRMINDC-----------------------MNGEIDM 78 (169)
T ss_dssp GGSHHHHHHHHHHHHHTCTTEEEEEEEEEEC------CCSHHHHHHHHHH-----------------------HTTCCSE
T ss_pred ccCHHHHHHHHHHHHHHCCCCeEEEEEeeCCccCCCcCCCHHHHHHHHHH-----------------------HcCCCcE
Confidence 457777788888888653 3 32 33333221 2334455444443 3333444
Q ss_pred eEee-ccccc-cHHHHHHHHHHHHHcCCcEEEecC
Q 040341 156 LLLK-VNQIG-SVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 156 ilIK-~nqiG-tlte~l~~~~~a~~~g~~~ivs~r 188 (251)
|+++ +.+++ ...++++.++.++++|+.+++-..
T Consensus 79 vvv~~ldRl~R~~~~~~~~~~~l~~~gv~l~~~~~ 113 (169)
T 3g13_A 79 VFTKSISRFARNTLDTLKYVRMLKERNIAVYFEDE 113 (169)
T ss_dssp EEESCHHHHCSSHHHHHHHHHHHHTTTCEEEETTT
T ss_pred EEEEeccccccChHHHHHHHHHHHHcCCEEEEecC
Confidence 5443 44444 678899999999999998877553
No 293
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=30.02 E-value=30 Score=27.07 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=34.7
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhh
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSV 202 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAv 202 (251)
+-++|=.++-|.-.+++++++.|++.|.+++.=....++.-.-.+|..+
T Consensus 111 ~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l 159 (188)
T 1tk9_A 111 KDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNL 159 (188)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEE
Confidence 4455667888888999999999999999885544434444445555544
No 294
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=29.90 E-value=77 Score=29.05 Aligned_cols=81 Identities=16% Similarity=0.147 Sum_probs=52.1
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccccHHHHHHHHHHHHHcC
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtlte~l~~~~~a~~~g 180 (251)
-+.+.+|....-...|..+.+..|.++..+ + ..+++.+++++..+ ...++|- | |-.|.+.+.-+++++|+++|
T Consensus 173 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~---~~d~~~l~~~i~~~-tk~v~l~~p~NptG~v~~l~~i~~la~~~g 247 (464)
T 1ibj_A 173 EIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-N---TTKLDEVAAAIGPQ-TKLVWLESPTNPRQQISDIRKISEMAHAQG 247 (464)
T ss_dssp EEEEESSCCHHHHHHHHHTSGGGTCEEEEE-C---TTSHHHHHHHCCSS-EEEEEECSSCTTTCCCCCHHHHHHHHHTTT
T ss_pred EEEEECCCchhHHHHHHHHHHHcCCEEEEe-C---CCCHHHHHHHhccC-ceEEEEeCCCCCCCEeecHHHHHHHHHHcC
Confidence 455677766443344444455565554333 2 23788998888643 4455553 3 44788888888999999999
Q ss_pred CcEEEecC
Q 040341 181 WGVMASHR 188 (251)
Q Consensus 181 ~~~ivs~r 188 (251)
+.+++-.-
T Consensus 248 i~livDea 255 (464)
T 1ibj_A 248 ALVLVDNS 255 (464)
T ss_dssp CEEEEECT
T ss_pred CEEEEECC
Confidence 98887553
No 295
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=29.89 E-value=67 Score=29.21 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=18.0
Q ss_pred CCcHHHHHHHHHHHHhcCCccceeeeeehhh
Q 040341 29 QESYEGFELLKTAIAKGGYIGKIVIGMDVAA 59 (251)
Q Consensus 29 ~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aa 59 (251)
.+.+...+++..| +++||+. +.+.+|+..
T Consensus 157 ~d~~~~~~~~~ra-~~~G~~a-l~itvd~p~ 185 (392)
T 2nzl_A 157 KDREVTKKLVRQA-EKMGYKA-IFVTVDTPY 185 (392)
T ss_dssp SSHHHHHHHHHHH-HHTTCCC-EEEECSCSS
T ss_pred CCHHHHHHHHHHH-HHCCCCE-EEEeCCCCC
Confidence 3455666777775 6888852 455566643
No 296
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=29.89 E-value=1.5e+02 Score=27.06 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=50.9
Q ss_pred cChhhHHHHHHHhhhcCCceeecCC---CCcccHHHHHHHHhhhCCceEEEcccccccCHHHHH----HHHhccCcc--e
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDP---FDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVE----KAIKEKTCN--A 155 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP---~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~----~~i~~~a~n--~ 155 (251)
.+.++++..+.......++--+..+ |.++||.........+.. .++.-||..-.++..+. +........ .
T Consensus 235 ms~~ql~~R~~~~~~~i~~~~l~~g~~~l~~~~~~~l~~a~~~l~~-~~l~i~d~~~~s~~~i~~~ir~l~~~~~~~~~l 313 (444)
T 3bgw_A 235 MGKKENIKRLIVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISN-SNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVI 313 (444)
T ss_dssp SCTTHHHHHHHHHHSCCCHHHHHHTGGGTCCSCHHHHHHHHHHHHT-SCEEEECCSSCBHHHHHHHHHHHHHHSCSSCEE
T ss_pred CCHHHHHHHHHHHHcCCCHHHHhcccCCCCHHHHHHHHHHHHHHhc-CCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 4455655554443334444333444 677787655554444422 23433443334555554 333334456 6
Q ss_pred eEeec-----------cccccHHHHHH-HHHHHHHcCCcEEE-ec
Q 040341 156 LLLKV-----------NQIGSVTESIE-AVKMSKRAGWGVMA-SH 187 (251)
Q Consensus 156 ilIK~-----------nqiGtlte~l~-~~~~a~~~g~~~iv-s~ 187 (251)
|+|-. |+.--+++..+ ...+|++.|+.+++ +|
T Consensus 314 IVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsq 358 (444)
T 3bgw_A 314 VMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQ 358 (444)
T ss_dssp EEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 66532 11112333333 34589999999976 55
No 297
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=29.84 E-value=1.1e+02 Score=26.43 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=65.1
Q ss_pred hhhHHHHHHHhh----hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEc-c-cccccCHHHHHHHHhccCcceeEee-
Q 040341 87 GDGLKNVYRSFI----SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG-D-DLLVTNPKRVEKAIKEKTCNALLLK- 159 (251)
Q Consensus 87 ~~elid~~~~l~----~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg-D-dl~vtn~~~i~~~i~~~a~n~ilIK- 159 (251)
..+.+......+ ..=.-+.+.+|-+..-...|..+.++.|-++..+- | +-..-+++.+++.+..+ ..+|++-
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKS-TRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTT-EEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCC-ceEEEEeC
Confidence 346556554422 33235677788777777888887766665554442 2 11334788888887643 3455554
Q ss_pred c-cccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 160 V-NQIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 160 ~-nqiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
| |-.|.+...-++.++|+++|+.+++-.-.
T Consensus 174 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 204 (406)
T 3cai_A 174 ASGTLGGVTDLRAMTKLVHDVGALVVVDHSA 204 (406)
T ss_dssp BCTTTCBBCCCHHHHHHHHHTTCEEEEECTT
T ss_pred CcCCccccCCHHHHHHHHHHcCCEEEEEccc
Confidence 2 44577777778889999999988876543
No 298
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=29.43 E-value=2.5e+02 Score=23.50 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCC
Q 040341 168 ESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 213 (251)
Q Consensus 168 e~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~ 213 (251)
.+.++.++|+++|..++|..+ .|+|..+++.-+-.|.
T Consensus 84 ~a~~l~~l~~~~~~~liInd~---------~~lA~~~gAdGVHLg~ 120 (243)
T 3o63_A 84 ACEILADAAHRYGALFAVNDR---------ADIARAAGADVLHLGQ 120 (243)
T ss_dssp HHHHHHHHHHHTTCEEEEESC---------HHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHhhCCEEEEeCH---------HHHHHHhCCCEEEecC
Confidence 345677789999999999877 7888888887666664
No 299
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=29.25 E-value=45 Score=27.88 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=32.3
Q ss_pred HHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc---CCcEEEe
Q 040341 144 VEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA---GWGVMAS 186 (251)
Q Consensus 144 i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~---g~~~ivs 186 (251)
.++.+-.+.++++++=|+-+||+.|..++....|-. +.++++=
T Consensus 123 ~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll 168 (217)
T 1wek_A 123 VRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLL 168 (217)
T ss_dssp HHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred HHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEe
Confidence 344455557899999999999999999999987642 3555443
No 300
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=29.24 E-value=34 Score=28.20 Aligned_cols=100 Identities=10% Similarity=0.054 Sum_probs=59.0
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEccccccc-----CHHHHHHHHhccCcceeEeec
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVT-----NPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vt-----n~~~i~~~i~~~a~n~ilIK~ 160 (251)
+++++-+.+.+ .. |.|+++. |- |........+. .+.|++-.-... +.+.++.|.+.+.+==++..+
T Consensus 63 ~~~~l~~~~~~-~r-~di~~v~-~~---~~~~n~~a~~~---~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~ 133 (212)
T 1v77_A 63 KPSLVRDTVQK-FK-SYLIYVE-SN---DLRVIRYSIEK---GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRP 133 (212)
T ss_dssp CHHHHHHHHHH-CS-SSEEEEE-CS---CHHHHHHHHHT---TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHH
T ss_pred CHHHHHHHHHh-cC-cEEEEEE-eC---CHHHHHHHHhC---CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcH
Confidence 34454444433 12 6787764 43 44445444333 467776542221 345555566555433333322
Q ss_pred -------cccccHHHHHHHHHHHHHcCCcEEEecCCCCCCc
Q 040341 161 -------NQIGSVTESIEAVKMSKRAGWGVMASHRSGETED 194 (251)
Q Consensus 161 -------nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d 194 (251)
.|.|++....+++++|+++|.+++||+..-...|
T Consensus 134 ~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~ 174 (212)
T 1v77_A 134 LLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWD 174 (212)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGG
T ss_pred HhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhh
Confidence 3566788889999999999999999997655433
No 301
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=29.19 E-value=1.1e+02 Score=26.19 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=55.3
Q ss_pred CCceEEEcccccccCHHHHH-HHHhcc--------CcceeEeecccc---ccHHHHHHHHHHHHHcCCcEEEecCCCCCC
Q 040341 126 GRHVQIVGDDLLVTNPKRVE-KAIKEK--------TCNALLLKVNQI---GSVTESIEAVKMSKRAGWGVMASHRSGETE 193 (251)
Q Consensus 126 g~~~~ivgDdl~vtn~~~i~-~~i~~~--------a~n~ilIK~nqi---Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~ 193 (251)
+.++.+++---.....+.++ ++...+ ....++||.|++ |++.++++.++........+.|+..+-|.
T Consensus 116 ~~~~~~~~tRkt~p~~r~~~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee- 194 (273)
T 2b7n_A 116 SHKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKNLPFTAKIEIECESFEE- 194 (273)
T ss_dssp CSSSEEECCSCCCTTCHHHHHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSSHHHHHHHHGGGSCTTCCEEEEESSHHH-
T ss_pred CCCeEEEEcCCCChhhHHHHHHHHHhCCCcceEcCccceEEeeCCHHHHhCCHHHHHHHHHHhCCCCceEEEEcCCHHH-
Confidence 44566666553333333333 344433 345789999886 67777766655432222467886654422
Q ss_pred chhHhhhhhhcccCccccCCCCchhHHHHhhHHH
Q 040341 194 DTFIADLSVGLATGQIKTGAPCRSERLAKYNQLL 227 (251)
Q Consensus 194 d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~ll 227 (251)
+.-|+..++.+|+++.. ..+-+.+.-+.+
T Consensus 195 ----~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l 223 (273)
T 2b7n_A 195 ----AKNAMNAGADIVMCDNL-SVLETKEIAAYR 223 (273)
T ss_dssp ----HHHHHHHTCSEEEEETC-CHHHHHHHHHHH
T ss_pred ----HHHHHHcCCCEEEECCC-CHHHHHHHHHHh
Confidence 34456678999999875 355555544443
No 302
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=29.07 E-value=1.8e+02 Score=26.45 Aligned_cols=74 Identities=19% Similarity=0.164 Sum_probs=52.3
Q ss_pred ccCHHHHHHHHhc-cCcceeEeec------cccccHHHHHHHHHHHHH--cCCcEEEecCCCCCC---c--hhHhhhhhh
Q 040341 138 VTNPKRVEKAIKE-KTCNALLLKV------NQIGSVTESIEAVKMSKR--AGWGVMASHRSGETE---D--TFIADLSVG 203 (251)
Q Consensus 138 vtn~~~i~~~i~~-~a~n~ilIK~------nqiGtlte~l~~~~~a~~--~g~~~ivs~rsgEt~---d--~~iadLAva 203 (251)
..+++.+++++.. .....|.+-. |-.|++.+.-+++++|++ +|..++|-.--++-- . ..-+|+.++
T Consensus 161 ~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~ 240 (427)
T 3i16_A 161 KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAG 240 (427)
T ss_dssp SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEE
T ss_pred CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEe
Confidence 3578888888874 3445555544 567999999999999999 999998876444321 1 233688888
Q ss_pred cccCcccc
Q 040341 204 LATGQIKT 211 (251)
Q Consensus 204 ~~~~~ik~ 211 (251)
+....+-.
T Consensus 241 S~sK~lgg 248 (427)
T 3i16_A 241 SLIKNIGG 248 (427)
T ss_dssp ETTSGGGT
T ss_pred cCcccCCC
Confidence 87776643
No 303
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=29.02 E-value=43 Score=26.17 Aligned_cols=53 Identities=19% Similarity=0.071 Sum_probs=38.3
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+-++|=.++-|.-.+++++++.|++.|.+++.=....++.-...+|..+-+.+
T Consensus 80 ~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~ 132 (186)
T 1m3s_A 80 GDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPG 132 (186)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEECSC
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEeCC
Confidence 33555677778889999999999999998866555555555566676654444
No 304
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=28.97 E-value=42 Score=30.20 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=27.8
Q ss_pred ccccccHHHHHHHHHHHHHcCCcEEE----ecCCCCC
Q 040341 160 VNQIGSVTESIEAVKMSKRAGWGVMA----SHRSGET 192 (251)
Q Consensus 160 ~nqiGtlte~l~~~~~a~~~g~~~iv----s~rsgEt 192 (251)
+.+.||..+..+.++.|+++|++||+ .|.+.+.
T Consensus 62 ~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 98 (405)
T 1ht6_A 62 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADY 98 (405)
T ss_dssp GCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCSE
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcCcccCCC
Confidence 46789999999999999999999966 6666554
No 305
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=28.82 E-value=1.3e+02 Score=23.52 Aligned_cols=58 Identities=10% Similarity=0.172 Sum_probs=35.7
Q ss_pred CcccHHHHHHHHhhhC------CceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE
Q 040341 111 DQDDWEHHAELTGKIG------RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV 183 (251)
Q Consensus 111 ~e~D~~~~~~l~~~lg------~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ 183 (251)
.+...+....+.+++| ..|.++||.. + ++..+-. +...+.+.|+. +..+.|+++||++
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~--~---D~~~~~~--ag~~~~~~~~~--------~l~~~a~~~~w~~ 220 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSV--N---DVPLLEA--VTRPIAANPSP--------GLREIAQARGWQV 220 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCG--G---GHHHHHH--SSEEEEESCCH--------HHHHHHHHHTCEE
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCH--h---hHHHHHh--CCCeEEECcCH--------HHHHHHHHCCCcE
Confidence 3444555666666665 4688999953 3 4433322 34556665553 4567888999976
No 306
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.74 E-value=1.3e+02 Score=21.92 Aligned_cols=68 Identities=12% Similarity=0.028 Sum_probs=34.4
Q ss_pred CCceeecCCCCccc-HHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHH
Q 040341 101 HPIVSIEDPFDQDD-WEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEA 172 (251)
Q Consensus 101 ypI~~IEDP~~e~D-~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~ 172 (251)
+.++.+.-.+...+ ++-...+.+... -.+.++.+. .+...+..++..+ +..++.||-....+..+++.
T Consensus 48 ~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~---~~~~~~~~~~~~g-~~~~l~kP~~~~~L~~~i~~ 117 (155)
T 1qkk_A 48 AGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGH---GDIPMAVQAIQDG-AYDFIAKPFAADRLVQSARR 117 (155)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECG---GGHHHHHHHHHTT-CCEEEESSCCHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECC---CChHHHHHHHhcC-CCeEEeCCCCHHHHHHHHHH
Confidence 44666554444333 333334433321 133334332 2455666777665 56788998765555555443
No 307
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=28.61 E-value=71 Score=28.46 Aligned_cols=118 Identities=9% Similarity=0.078 Sum_probs=70.8
Q ss_pred hHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec--ccccc
Q 040341 89 GLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV--NQIGS 165 (251)
Q Consensus 89 elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~--nqiGt 165 (251)
+.+..... ++..=.-+.+.+|-+..-+..|..+.+..|-++..++| +.+++.+++++.. ...+|.+-. |-.|.
T Consensus 84 ~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~d~~~l~~~i~~-~~~~v~~~~~~n~~G~ 159 (421)
T 2ctz_A 84 AAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR---EERPEEFLALTDE-KTRAWWVESIGNPALN 159 (421)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT---TCCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC---CCCHHHHHHhhcc-CCeEEEEECCCCCCCc
Confidence 43443333 33332355667777777777787666677655544422 2378999988865 344555542 33677
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCC---CCCCc--hhHhhhhhhcccCccc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRS---GETED--TFIADLSVGLATGQIK 210 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rs---gEt~d--~~iadLAva~~~~~ik 210 (251)
+...-++.++|+++|+.+++-.-. |-..+ ..-+|+.+.+....+-
T Consensus 160 ~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~ 209 (421)
T 2ctz_A 160 IPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVG 209 (421)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTT
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCccccc
Confidence 777778899999999998875533 21111 2235666655555444
No 308
>1b43_A Protein (FEN-1); nuclease, DNA repair, DNA replication, transferase; 2.00A {Pyrococcus furiosus} SCOP: a.60.7.1 c.120.1.2 PDB: 1mc8_A
Probab=28.52 E-value=56 Score=28.92 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=66.0
Q ss_pred hhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccccc--
Q 040341 88 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS-- 165 (251)
Q Consensus 88 ~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGt-- 165 (251)
.++++..+++++.++|-+|+-|. |-| +.-+.|.++ |..+.|+..|. +-+. .+ +..++.+...-|.
T Consensus 129 ~~~~~~~~~lL~~~gip~i~ap~-EAD-a~iA~La~~-g~~~~i~S~D~-----D~l~----~g-~~~v~~~~~~~~~~~ 195 (340)
T 1b43_A 129 EMLIEDAKKLLELMGIPIVQAPS-EGE-AQAAYMAAK-GSVYASASQDY-----DSLL----FG-APRLVRNLTITGKRK 195 (340)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSS-CHH-HHHHHHHHH-TSSSEEECSSS-----HHHH----TT-CSEEEESTTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEcCh-hHH-HHHHHHHHc-CCEEEEEccCC-----Ccce----ec-CcEEEEEeccCCCcc
Confidence 35678899999999999999994 444 455566654 33455666652 2222 22 4445555543221
Q ss_pred ----------HHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHH
Q 040341 166 ----------VTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLA 221 (251)
Q Consensus 166 ----------lte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~a 221 (251)
-.+.+..-++..+.|+ ...-+.|+++=+|+.++.-|-|.=|..+|
T Consensus 196 ~p~~~~~v~~~~~~~~~~~v~~~~gl-----------~~~q~id~~~L~G~Dy~p~gv~GiG~ktA 250 (340)
T 1b43_A 196 LPGKNVYVEIKPELIILEEVLKELKL-----------TREKLIELAILVGTDYNPGGIKGIGLKKA 250 (340)
T ss_dssp CTTSSCEEEECCEEEEHHHHHHHHTC-----------CHHHHHHHHHHHCCTTSTTCSTTCCHHHH
T ss_pred CcccccccccceeEEEHHHHHHHhCC-----------CHHHHHHHHHhcCCCCCCCCCCCccHHHH
Confidence 0011223333444554 24668899999999999867776676654
No 309
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=28.51 E-value=3.3e+02 Score=25.22 Aligned_cols=117 Identities=8% Similarity=0.098 Sum_probs=66.6
Q ss_pred HHHHHHhhhc-CCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee--cc----
Q 040341 91 KNVYRSFISD-HPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK--VN---- 161 (251)
Q Consensus 91 id~~~~l~~~-ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK--~n---- 161 (251)
.+....|++. ..++.| -.|..+.-++..+++.+.++ .++|+.- .+.+++.++.+++.+ +++|.+= +.
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p-~~~Vi~g--~v~t~e~a~~l~~aG-aD~I~vg~g~Gs~~~ 306 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFP-DVQVIGG--NIATAEAAKALAEAG-ADAVKVGIGPGSICT 306 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCT-TSEEEEE--EECSHHHHHHHHHTT-CSEEEECSSCSTTCH
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCC-CceEEEe--eeCcHHHHHHHHHcC-CCEEEECCCCCcCCC
Confidence 4556665554 234443 34554445566677777764 3455543 367899998888775 5565541 10
Q ss_pred -c------cccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 162 -Q------IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 162 -q------iGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
+ ..+++...++++.+++.++++|.+..-... .+... |+++|+..+-.|..
T Consensus 307 t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~-~di~k--al~~GAd~V~vGs~ 363 (490)
T 4avf_A 307 TRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFS-GDLAK--AMVAGAYCVMMGSM 363 (490)
T ss_dssp HHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSH-HHHHH--HHHHTCSEEEECTT
T ss_pred ccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCH-HHHHH--HHHcCCCeeeecHH
Confidence 1 234555666777777779999887753322 22222 34455666666644
No 310
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=28.47 E-value=2e+02 Score=23.76 Aligned_cols=81 Identities=17% Similarity=0.158 Sum_probs=47.2
Q ss_pred ecCCCCcccHHHHHHHHhhhCCceEEEccccccc-CHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEE
Q 040341 106 IEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVT-NPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVM 184 (251)
Q Consensus 106 IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vt-n~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~i 184 (251)
+.+||...=+.+..+..++.|-.+.++.-+.... ..+.++..+. ..++++++-+.....+. +.++.+++.|++++
T Consensus 12 ~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~-~~vdgiIi~~~~~~~~~---~~~~~~~~~~iPvV 87 (313)
T 3m9w_A 12 LRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMIN-RGVDVLVIIPYNGQVLS---NVVKEAKQEGIKVL 87 (313)
T ss_dssp CSSSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHH-TTCSEEEEECSSTTSCH---HHHHHHHTTTCEEE
T ss_pred CCChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-cCCCEEEEeCCChhhhH---HHHHHHHHCCCeEE
Confidence 4677777767777777777765665553321111 1123333443 46788888776544333 35566788899887
Q ss_pred EecCCC
Q 040341 185 ASHRSG 190 (251)
Q Consensus 185 vs~rsg 190 (251)
+-.+..
T Consensus 88 ~~~~~~ 93 (313)
T 3m9w_A 88 AYDRMI 93 (313)
T ss_dssp EESSCC
T ss_pred EECCcC
Confidence 766543
No 311
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=28.44 E-value=1e+02 Score=25.53 Aligned_cols=54 Identities=15% Similarity=0.120 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCcEEEecC---CCC---CCchhHhhhhhhcccCccccCCCCchhHHHH
Q 040341 169 SIEAVKMSKRAGWGVMASHR---SGE---TEDTFIADLSVGLATGQIKTGAPCRSERLAK 222 (251)
Q Consensus 169 ~l~~~~~a~~~g~~~ivs~r---sgE---t~d~~iadLAva~~~~~ik~G~~~r~Er~aK 222 (251)
+.+.++.+.+.|...++-+. .|. ..-..+..++=.+...-+-.|++...|.+.+
T Consensus 158 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~ 217 (266)
T 2w6r_A 158 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 217 (266)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHH
Confidence 34555666666766655432 121 1123455555445556666677766665544
No 312
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=28.22 E-value=1.6e+02 Score=20.71 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=41.5
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCC-----c-ccHHHHHHHHhhhC-CceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFD-----Q-DDWEHHAELTGKIG-RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~-----e-~D~~~~~~l~~~lg-~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+.++.++.+.+ ..+.++.+.-.+. . +-++-...+.+... -++.++.+. .+.+.+.++++.+ +..++.
T Consensus 35 ~~~~a~~~l~~--~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~---~~~~~~~~~~~~g-~~~~l~ 108 (140)
T 2qr3_A 35 SPVSLSTVLRE--ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAY---ADIDLAVRGIKEG-ASDFVV 108 (140)
T ss_dssp CHHHHHHHHHH--SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEG---GGHHHHHHHHHTT-CCEEEE
T ss_pred CHHHHHHHHHc--CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECC---CCHHHHHHHHHcC-chheee
Confidence 44565565543 3445776665553 2 33444445554421 134344333 2466677777765 467889
Q ss_pred eccccccHHHHH
Q 040341 159 KVNQIGSVTESI 170 (251)
Q Consensus 159 K~nqiGtlte~l 170 (251)
||-....+.+++
T Consensus 109 kp~~~~~l~~~l 120 (140)
T 2qr3_A 109 KPWDNQKLLETL 120 (140)
T ss_dssp ESCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 997654444444
No 313
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=28.21 E-value=52 Score=29.89 Aligned_cols=78 Identities=17% Similarity=0.232 Sum_probs=50.7
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEee-ccccccH-HHHHHHHHHHHHc
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLK-VNQIGSV-TESIEAVKMSKRA 179 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK-~nqiGtl-te~l~~~~~a~~~ 179 (251)
-|.+.+|.+..-. ...+..|-++..| -|+-...+++.+++++..+ ..+|++- ||-.|.+ .+.-+++++|+++
T Consensus 158 ~Vlv~~~~h~~~~----~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~-t~~v~~~~pn~~G~~~~~l~~i~~l~~~~ 232 (474)
T 1wyu_B 158 VVLVPDSAHGSNP----ATASMAGYQVREIPSGPEGEVDLEALKRELGPH-VAALMLTNPNTLGLFERRILEISRLCKEA 232 (474)
T ss_dssp EEEEETTSCTHHH----HHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTT-EEEEEECSSCTTSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCcChhhH----HHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCC-ceEEEEECCCCCcccCCCHHHHHHHHHHc
Confidence 5667778774332 2234455444443 2332556899999988654 3344443 6667777 5788899999999
Q ss_pred CCcEEE
Q 040341 180 GWGVMA 185 (251)
Q Consensus 180 g~~~iv 185 (251)
|+.+++
T Consensus 233 g~~li~ 238 (474)
T 1wyu_B 233 GVQLYY 238 (474)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 998886
No 314
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=28.04 E-value=1.1e+02 Score=27.45 Aligned_cols=71 Identities=24% Similarity=0.306 Sum_probs=44.0
Q ss_pred hhC-CceEEEcccccccC--HHHHHHHHhccCcceeEe-eccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCc
Q 040341 124 KIG-RHVQIVGDDLLVTN--PKRVEKAIKEKTCNALLL-KVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETED 194 (251)
Q Consensus 124 ~lg-~~~~ivgDdl~vtn--~~~i~~~i~~~a~n~ilI-K~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d 194 (251)
++| .++.||.|.....+ .+++...++........+ ....--++....++++.+++++..++|+-.-|-+.|
T Consensus 28 ~~g~~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv~D 102 (383)
T 3ox4_A 28 GSGFKNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHD 102 (383)
T ss_dssp TSCCCEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHH
T ss_pred HcCCCEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHHHH
Confidence 344 46777777632223 456666665433333332 223335888888999999999999998886444433
No 315
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=27.91 E-value=1.5e+02 Score=26.70 Aligned_cols=73 Identities=15% Similarity=0.061 Sum_probs=52.6
Q ss_pred cccCHHHHHHHHhccCcceeEeec------cccccHHHHHHHHHHHHH--cCCcEEEecCCCCCC-----chhHhhhhhh
Q 040341 137 LVTNPKRVEKAIKEKTCNALLLKV------NQIGSVTESIEAVKMSKR--AGWGVMASHRSGETE-----DTFIADLSVG 203 (251)
Q Consensus 137 ~vtn~~~i~~~i~~~a~n~ilIK~------nqiGtlte~l~~~~~a~~--~g~~~ivs~rsgEt~-----d~~iadLAva 203 (251)
...+++.+++++..+ ...|.+-. |-.|++.+.-+++++|++ +|..++|-.--++-- ...-+|+.++
T Consensus 145 g~~d~e~l~~ai~~~-tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~ 223 (409)
T 3jzl_A 145 GDVDFPRIAKKMTPK-TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAG 223 (409)
T ss_dssp SCCCHHHHHHHCCTT-EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEE
T ss_pred CCcCHHHHHHhccCC-CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEE
Confidence 446888998888653 45566654 778999999999999999 999998876544321 1233688888
Q ss_pred cccCccc
Q 040341 204 LATGQIK 210 (251)
Q Consensus 204 ~~~~~ik 210 (251)
+....+-
T Consensus 224 S~sK~lg 230 (409)
T 3jzl_A 224 SLIKNPG 230 (409)
T ss_dssp ETTSGGG
T ss_pred CccccCC
Confidence 8777654
No 316
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=27.77 E-value=1.2e+02 Score=21.56 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=23.7
Q ss_pred cCHHHHHHHHhccCcceeEeeccccccHHHHHHH
Q 040341 139 TNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEA 172 (251)
Q Consensus 139 tn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~ 172 (251)
.+.+.+.++++.+ ++.++.||-....+.++++.
T Consensus 91 ~~~~~~~~~~~~g-~~~~l~KP~~~~~l~~~i~~ 123 (140)
T 3lua_A 91 DNPGYRHAALKFK-VSDYILKPYPTKRLENSVRS 123 (140)
T ss_dssp CCHHHHHHHHHSC-CSEEEESSCCTTHHHHHHHH
T ss_pred CCHHHHHHHHHcC-CCEEEECCCCHHHHHHHHHH
Confidence 3567778888776 67889999776666555543
No 317
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=27.51 E-value=33 Score=27.50 Aligned_cols=35 Identities=11% Similarity=-0.007 Sum_probs=28.3
Q ss_pred HHHHhccCcceeEeeccccccHHHHHHHHHHHHHc
Q 040341 145 EKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 145 ~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
++.+-.+.++++++=|+-+||+.|..++..+.|-.
T Consensus 90 Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g 124 (171)
T 1weh_A 90 RIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLR 124 (171)
T ss_dssp HHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhC
Confidence 44444556889999999999999999999987743
No 318
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=27.34 E-value=2.3e+02 Score=24.68 Aligned_cols=93 Identities=12% Similarity=0.143 Sum_probs=48.8
Q ss_pred ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccc----cHHH--------HHHHHH-HHHHc
Q 040341 113 DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG----SVTE--------SIEAVK-MSKRA 179 (251)
Q Consensus 113 ~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiG----tlte--------~l~~~~-~a~~~ 179 (251)
..|+..+++.+.++. .+|+.. .+++++.++++++.| +++|.+- |.-| +... +++++. .++..
T Consensus 135 ~~~~~i~~lr~~~~~-~~vi~G--~v~s~e~A~~a~~aG-ad~Ivvs-~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~ 209 (336)
T 1ypf_A 135 AVINMIQHIKKHLPE-SFVIAG--NVGTPEAVRELENAG-ADATKVG-IGPGKVCITKIKTGFGTGGWQLAALRWCAKAA 209 (336)
T ss_dssp HHHHHHHHHHHHCTT-SEEEEE--EECSHHHHHHHHHHT-CSEEEEC-SSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCC-CEEEEC--CcCCHHHHHHHHHcC-CCEEEEe-cCCCceeecccccCcCCchhHHHHHHHHHHHc
Confidence 445566666676632 344432 478899999998876 5666661 2111 1111 233333 33445
Q ss_pred CCcEEEecCCCCCCchhHhhhhhhcccCccccCC
Q 040341 180 GWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 213 (251)
Q Consensus 180 g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~ 213 (251)
+++++.+.. -.+..+.+.=|+ +|+..+-.|.
T Consensus 210 ~ipVIa~GG-I~~g~Dv~kala--lGAdaV~iGr 240 (336)
T 1ypf_A 210 SKPIIADGG-IRTNGDVAKSIR--FGATMVMIGS 240 (336)
T ss_dssp SSCEEEESC-CCSTHHHHHHHH--TTCSEEEESG
T ss_pred CCcEEEeCC-CCCHHHHHHHHH--cCCCEEEeCh
Confidence 888888664 223333333333 3444444443
No 319
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=27.34 E-value=39 Score=26.78 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=34.6
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhH---hhhhhh
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFI---ADLSVG 203 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~i---adLAva 203 (251)
+-++|=.++-|.-.+++++++.|++.|..++.=.....+.-... +|..+-
T Consensus 114 ~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~ 166 (199)
T 1x92_A 114 GDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIR 166 (199)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEE
Confidence 44566678889999999999999999998865444333333344 454443
No 320
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=27.32 E-value=40 Score=29.84 Aligned_cols=36 Identities=19% Similarity=0.365 Sum_probs=28.5
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
.+.++|=.+|-|.-.+++++++.|++.|..++.=..
T Consensus 102 ~~dlvI~iS~SG~t~e~~~a~~~ak~~Ga~vi~IT~ 137 (355)
T 2a3n_A 102 KDSVVITLSKSGDTKESVAIAEWCKAQGIRVVAITK 137 (355)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 455677789999999999999999999977744333
No 321
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=27.29 E-value=88 Score=27.75 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=70.6
Q ss_pred hHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccccH
Q 040341 89 GLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSV 166 (251)
Q Consensus 89 elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtl 166 (251)
+.+.....+++.=.-+.+.+|....-+..|..+.+..|-++..+ | +.+++.+++++..+ ...|.|- | |-.|.+
T Consensus 93 ~ai~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-~---~~d~~~l~~~i~~~-t~~v~~~~p~nptG~~ 167 (403)
T 3cog_A 93 AATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV-D---CSKIKLLEAAITPE-TKLVWIETPTNPTQKV 167 (403)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE-C---TTSHHHHHHHCCTT-EEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE-C---CCCHHHHHHhcCcC-CeEEEEECCCCCCCee
Confidence 44444443433323567777877655666776666776555443 2 23788888888643 3444443 3 567888
Q ss_pred HHHHHHHHHHHHcC-CcEEEecCCCCC----CchhHhhhhhhcccCccc
Q 040341 167 TESIEAVKMSKRAG-WGVMASHRSGET----EDTFIADLSVGLATGQIK 210 (251)
Q Consensus 167 te~l~~~~~a~~~g-~~~ivs~rsgEt----~d~~iadLAva~~~~~ik 210 (251)
...-+++++|+++| +.+++-.--... .-..-+|+.+.+...++-
T Consensus 168 ~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~ 216 (403)
T 3cog_A 168 IDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMN 216 (403)
T ss_dssp CCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTT
T ss_pred eCHHHHHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhcc
Confidence 88888899999999 888775533221 111235676666665544
No 322
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=27.21 E-value=1.6e+02 Score=20.42 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=20.5
Q ss_pred CHHHHHHHHhccCcceeEeeccccccHHHHHH
Q 040341 140 NPKRVEKAIKEKTCNALLLKVNQIGSVTESIE 171 (251)
Q Consensus 140 n~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~ 171 (251)
+.+.+.++++.|+ +.++.||-....+.++++
T Consensus 86 ~~~~~~~~~~~ga-~~~l~Kp~~~~~l~~~i~ 116 (126)
T 1dbw_A 86 DVPMAVEAMKAGA-VDFIEKPFEDTVIIEAIE 116 (126)
T ss_dssp CHHHHHHHHHTTC-SEEEESSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhCH-HHheeCCCCHHHHHHHHH
Confidence 5667777877754 678999976544444443
No 323
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=27.20 E-value=1.9e+02 Score=26.33 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=68.4
Q ss_pred hHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-ccccc
Q 040341 89 GLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGS 165 (251)
Q Consensus 89 elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGt 165 (251)
+.+..... ++..=.-+.+.+|.+..-+..|....++.|-++..+ | +.+++.+++++..+....|.+- | |-.|.
T Consensus 140 ~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~---~~d~~~l~~ai~~~tv~lV~le~p~NptG~ 215 (445)
T 1qgn_A 140 CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-D---PADVGALELALNQKKVNLFFTESPTNPFLR 215 (445)
T ss_dssp HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-C---SSCHHHHHHHHHHSCEEEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-C---CCCHHHHHHHhccCCCCEEEEeCCCCCCCc
Confidence 43443333 444323455556766544444443445666555444 2 2378999998876432455554 3 56788
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCCCC--CC--chhHhhhhhhcccCccc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRSGE--TE--DTFIADLSVGLATGQIK 210 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rsgE--t~--d~~iadLAva~~~~~ik 210 (251)
+...-+++++|+++|+.++|-.--.. .. ...-+|+.+.+...++-
T Consensus 216 v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~g 264 (445)
T 1qgn_A 216 CVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLG 264 (445)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTT
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCccccc
Confidence 88888899999999998887654322 11 12235677666555543
No 324
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=27.09 E-value=2.9e+02 Score=23.40 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=74.4
Q ss_pred CcHHHHHHHHHHHHhcCCccceeeeeehhhhccccc-------------CCcceeecCCCCCCCCCCccChhhHHHH---
Q 040341 30 ESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDS-------------KDKTYDLNFKEENNDGSQKVSGDGLKNV--- 93 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~-------------~~g~Y~l~~~~~~~d~~~~~s~~elid~--- 93 (251)
+.+++.+.|..|+ ++||+- +|.|. .|.+ ....+.+..+. .....+++.....
T Consensus 36 d~~e~~~~v~~Al-~~Gin~-----~DTA~--~YgsE~~vG~~l~~~~~~r~~~~i~tk~----~~~~~~~~~~~~~~e~ 103 (290)
T 4gie_A 36 DGAETANAVRWAI-EAGYRH-----IDTAY--IYSNERGVGQGIRESGVPREEVWVTTKV----WNSDQGYEKTLAAFER 103 (290)
T ss_dssp TTHHHHHHHHHHH-HHTCCE-----EECCG--GGTCHHHHHHHHHHHCCCGGGSEEEEEE----CGGGCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCE-----Eeccc--ccCCHHHHHHHHHhcCCcchhccccccc----cccCCChHHHHHHHHH
Confidence 4589999999999 789872 23321 1111 01122222111 1122334443333
Q ss_pred -HHHhhhcC-CceeecCCCCcccHHHHHHHHhhh-CCceEEEcccccccCHHHHHHHHhccCcce----eEeeccccccH
Q 040341 94 -YRSFISDH-PIVSIEDPFDQDDWEHHAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNA----LLLKVNQIGSV 166 (251)
Q Consensus 94 -~~~l~~~y-pI~~IEDP~~e~D~~~~~~l~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~----ilIK~nqiGtl 166 (251)
+++|=-+| .+.+|=.|-.....+.|..|.+-. ..++--+| ++..++..+.++........ +.+-+...
T Consensus 104 SL~rL~~dyiDly~lH~p~~~~~~e~~~al~~l~~~Gkir~iG--vSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--- 178 (290)
T 4gie_A 104 SRELLGLEYIDLYLIHWPGKKKFVDTWKALEKLYEEKKVRAIG--VSNFEPHHLTELFKSCKIRPMVNQVELHPLFQ--- 178 (290)
T ss_dssp HHHHHTCSCEEEEEECCCCSSSHHHHHHHHHHHHHTTSEEEEE--EESCCHHHHHHHHTTCSSCCSEEEEECBTTBC---
T ss_pred HHHHhCCCceeeEEecCCCCCcchHHHHHHHHHHHCCCcceee--ecCCCHHHHHHHHHhccCCCceeeEeccccch---
Confidence 33332234 377777665555556666664332 12566666 34557888888766543322 22222111
Q ss_pred HHHHHHHHHHHHcCCcEEEecCC
Q 040341 167 TESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 167 te~l~~~~~a~~~g~~~ivs~rs 189 (251)
--+.+..|+++|+.++.-...
T Consensus 179 --~~~l~~~~~~~gi~~~a~spl 199 (290)
T 4gie_A 179 --QRTLREFCKQHNIAITAWSPL 199 (290)
T ss_dssp --CHHHHHHHHHTTCEEEEESTT
T ss_pred --hHHHHHHHHHcCceEeeeccc
Confidence 235678899999999875543
No 325
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=26.96 E-value=58 Score=23.35 Aligned_cols=82 Identities=10% Similarity=0.093 Sum_probs=41.1
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhC-CceEE--EcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIG-RHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg-~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++.+.+ ..+.++.+.-.+...| ++-...+.+.-. ..++| +.+. .+.+.+.++.+.| +..++.||-
T Consensus 34 ~~~~a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~---~~~~~~~~~~~~g-~~~~l~KP~ 107 (140)
T 3n53_A 34 NEKEALEQIDH--HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS---EHKEAIVNGLHSG-ADDYLTKPF 107 (140)
T ss_dssp SHHHHHHHHHH--HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC-------CTTTTTTCC-CSEEEESSC
T ss_pred CHHHHHHHHhc--CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC---CCHHHHHHHHhcC-CCeeeeCCC
Confidence 56676666654 3566887776665433 222334443320 23333 3332 1234444555555 678899998
Q ss_pred ccccHHHHHHHH
Q 040341 162 QIGSVTESIEAV 173 (251)
Q Consensus 162 qiGtlte~l~~~ 173 (251)
....+.++++.+
T Consensus 108 ~~~~l~~~i~~~ 119 (140)
T 3n53_A 108 NRNDLLSRIEIH 119 (140)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 766666665543
No 326
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=26.96 E-value=1.5e+02 Score=20.16 Aligned_cols=79 Identities=11% Similarity=0.165 Sum_probs=40.7
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCC-c-ccHHHHHHHHhhh-CC--ceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFD-Q-DDWEHHAELTGKI-GR--HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~-e-~D~~~~~~l~~~l-g~--~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
+.++.++.+.+ ..+.++.+.--+. . +-++-...+.+.. .. ++-++ +. .+.+...++.+.+ ++.++.||
T Consensus 37 ~~~~a~~~~~~--~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~---~~~~~~~~~~~~g-~~~~l~kp 109 (127)
T 2gkg_A 37 DGKGSVEQIRR--DRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GN---PDGFAQHRKLKAH-ADEYVAKP 109 (127)
T ss_dssp CHHHHHHHHHH--HCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-EC---GGGHHHHHHSTTC-CSEEEESS
T ss_pred CHHHHHHHHHh--cCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ec---CCchhHHHHHHhC-cchheeCC
Confidence 44566665544 3455776655443 3 2344444554431 12 33333 22 2345556666554 57789999
Q ss_pred cccccHHHHHH
Q 040341 161 NQIGSVTESIE 171 (251)
Q Consensus 161 nqiGtlte~l~ 171 (251)
-....+.++++
T Consensus 110 ~~~~~l~~~i~ 120 (127)
T 2gkg_A 110 VDADQLVERAG 120 (127)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 76555544443
No 327
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=26.91 E-value=38 Score=31.78 Aligned_cols=71 Identities=20% Similarity=0.157 Sum_probs=43.8
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE----EEecCCCCCCchhHhhhhhhcccCccccCCCCchhHH
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV----MASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERL 220 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~----ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~ 220 (251)
+..+.+.|++++||+....+|....+.++..++|++- +|.....++.+..+.|-.| ..-..+|+..-+.++
T Consensus 170 ~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v---d~I~fTGS~~~g~~i 244 (508)
T 3r64_A 170 APALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVP---KLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSC---SEEEEESCHHHHHHH
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCc---cEEEEECCHHHHHHH
Confidence 4556689999999999877665477888899998762 4443323443333332222 124567766555444
No 328
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=26.90 E-value=1.1e+02 Score=26.36 Aligned_cols=99 Identities=10% Similarity=0.148 Sum_probs=59.7
Q ss_pred ChhhHHHHHHHhhhcC------CceeecCCCCcccHHHHHHHHhhhCCceEEEc-c-cccccCHHHHHHHHhccCcceeE
Q 040341 86 SGDGLKNVYRSFISDH------PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG-D-DLLVTNPKRVEKAIKEKTCNALL 157 (251)
Q Consensus 86 s~~elid~~~~l~~~y------pI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg-D-dl~vtn~~~i~~~i~~~a~n~il 157 (251)
+..+.+......+-+. ..+.+++|-. .+|....+..|.++.-+- | +-+.-+++.+++++..+ ..+++
T Consensus 99 g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~----~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~-~~~v~ 173 (396)
T 3jtx_A 99 GSREALFSFVQTVLNPVSDGIKPAIVSPNPFY----QIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKR-TKLVF 173 (396)
T ss_dssp SHHHHHHHHHHHHCCC---CCCCEEEEEESCC----HHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHT-EEEEE
T ss_pred CcHHHHHHHHHHHhCCCCccCCCEEEEcCCCc----HhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccC-cEEEE
Confidence 3556666665555444 3788888965 456666666665443331 2 21234667777777653 44444
Q ss_pred e-eccc-ccc---HHHHHHHHHHHHHcCCcEEEecCC
Q 040341 158 L-KVNQ-IGS---VTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 158 I-K~nq-iGt---lte~l~~~~~a~~~g~~~ivs~rs 189 (251)
| -||. .|+ ..+..+++++|+++|+.+++-.--
T Consensus 174 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 210 (396)
T 3jtx_A 174 VCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECY 210 (396)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTT
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 4 4533 343 457777899999999988876543
No 329
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=26.77 E-value=1.4e+02 Score=26.46 Aligned_cols=71 Identities=14% Similarity=0.225 Sum_probs=45.7
Q ss_pred HhhhCCceEEEccccccc-C--HHHHHHHHhccCcceeEee-ccccccHHHHHHHHHHHHHcCCcEEEecCCCCC
Q 040341 122 TGKIGRHVQIVGDDLLVT-N--PKRVEKAIKEKTCNALLLK-VNQIGSVTESIEAVKMSKRAGWGVMASHRSGET 192 (251)
Q Consensus 122 ~~~lg~~~~ivgDdl~vt-n--~~~i~~~i~~~a~n~ilIK-~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt 192 (251)
.+++|.++.||.|.-... + .+++...++........+. ...--++....++++.+++++..++|+-.-|-+
T Consensus 36 l~~~g~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 110 (371)
T 1o2d_A 36 IDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSP 110 (371)
T ss_dssp GGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHH
T ss_pred HHHcCCEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 344466788888873323 2 4677766654333443332 223348889999999999999999998764444
No 330
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=26.77 E-value=45 Score=26.77 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=39.5
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+-++|=.++-|.-.+++++++.|++.|.+++.=....++.-...+|..+-+.+
T Consensus 90 ~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~~~ 142 (200)
T 1vim_A 90 QDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKG 142 (200)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCS
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEECC
Confidence 44566678889999999999999999999876665555655566666654443
No 331
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=26.72 E-value=1.1e+02 Score=24.95 Aligned_cols=108 Identities=15% Similarity=0.219 Sum_probs=62.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeecccccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS 165 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGt 165 (251)
+++++++..+.+ -+.++-.||=.+...+....-+..++ . .+ ++|=.. +.+.++++.+++.++- .+. -| |.
T Consensus 23 ~~~~~~~~~~~l-~~gGv~~iel~~k~~~~~~~i~~~~~-~-~~-~~gag~-vl~~d~~~~A~~~GAd-~v~-~~-~~-- 92 (207)
T 2yw3_A 23 GGEDLLGLARVL-EEEGVGALEITLRTEKGLEALKALRK-S-GL-LLGAGT-VRSPKEAEAALEAGAA-FLV-SP-GL-- 92 (207)
T ss_dssp SCCCHHHHHHHH-HHTTCCEEEEECSSTHHHHHHHHHTT-S-SC-EEEEES-CCSHHHHHHHHHHTCS-EEE-ES-SC--
T ss_pred CHHHHHHHHHHH-HHcCCCEEEEeCCChHHHHHHHHHhC-C-CC-EEEeCe-EeeHHHHHHHHHcCCC-EEE-cC-CC--
Confidence 556777777775 44577777766554443333233333 2 33 234443 4567999999887654 332 23 21
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCcccc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 211 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~ 211 (251)
..++++.++..|..+++|..+ ..=+.-|...++.++|.
T Consensus 93 ---d~~v~~~~~~~g~~~i~G~~t-----~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 93 ---LEEVAALAQARGVPYLPGVLT-----PTEVERALALGLSALKF 130 (207)
T ss_dssp ---CHHHHHHHHHHTCCEEEEECS-----HHHHHHHHHTTCCEEEE
T ss_pred ---CHHHHHHHHHhCCCEEecCCC-----HHHHHHHHHCCCCEEEE
Confidence 246677788889888888542 11134455667777776
No 332
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=26.65 E-value=1.7e+02 Score=20.63 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=38.1
Q ss_pred cCCceeecCCCCccc-HHHHHHHHhhh---CCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHH
Q 040341 100 DHPIVSIEDPFDQDD-WEHHAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAV 173 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D-~~~~~~l~~~l---g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~ 173 (251)
.+.++.+.--+...| ++-...+.+.. .-++.++.+. .+.+.+.++.+.+ ++.++.||-....+.++++.+
T Consensus 62 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~---~~~~~~~~~~~~g-~~~~l~kP~~~~~l~~~i~~~ 135 (149)
T 1k66_A 62 RPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTS---SNPKDIEICYSYS-ISSYIVKPLEIDRLTETVQTF 135 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESC---CCHHHHHHHHHTT-CSEEEECCSSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCC---CCHHHHHHHHHCC-CCEEEeCCCCHHHHHHHHHHH
Confidence 344666665554433 33333443321 1134344332 3567777777665 677899998766666655543
No 333
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=26.58 E-value=3e+02 Score=23.47 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=50.7
Q ss_pred cChhhHHHHHHHhhhcCCceeecCC---CCcccHHHHHHHHhhhCCceEEEcccccccCHHHHH----HHHhccCcc--e
Q 040341 85 VSGDGLKNVYRSFISDHPIVSIEDP---FDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVE----KAIKEKTCN--A 155 (251)
Q Consensus 85 ~s~~elid~~~~l~~~ypI~~IEDP---~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~----~~i~~~a~n--~ 155 (251)
.+.+++...+.......++--+..+ |.++||.........+.. .++.-+|..-.++..+. +......+. .
T Consensus 106 ~s~~~l~~R~~~~~~~i~~~~l~~~~~~l~~~~~~~l~~a~~~l~~-~~i~i~d~~~~~~~~i~~~i~~l~~~~~~~~~l 184 (315)
T 3bh0_A 106 MGKKENIKRLIVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISN-SNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVI 184 (315)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHSCHHHHCSSCHHHHHHHHHHHHT-SCEEEECCSCCBHHHHHHHHHHHHHTSSSCCEE
T ss_pred CCHHHHHHHHHHHHcCCCHHHHhcCCCCCCHHHHHHHHHHHHHHhC-CCEEEECCCCCCHHHHHHHHHHHHHhcCCCCeE
Confidence 4556665555544444554333333 566777655554444432 12333332334566554 333343455 5
Q ss_pred eEeeccc-----------cccHHHHHH-HHHHHHHcCCcEEE-ec
Q 040341 156 LLLKVNQ-----------IGSVTESIE-AVKMSKRAGWGVMA-SH 187 (251)
Q Consensus 156 ilIK~nq-----------iGtlte~l~-~~~~a~~~g~~~iv-s~ 187 (251)
|+|-.=| ..-+++.+. ..++|++.|+.+++ +|
T Consensus 185 VVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~lsq 229 (315)
T 3bh0_A 185 VMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQ 229 (315)
T ss_dssp EEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEee
Confidence 5553211 112333333 34579999999876 45
No 334
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=26.43 E-value=1.7e+02 Score=25.15 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=49.8
Q ss_pred HHHhhhcCCceeecCCCCcccHHHHHHHHhhhCC--ceEEEc-c-cccccCHHHHHHHHhccCcceeEeeccccccHHHH
Q 040341 94 YRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGR--HVQIVG-D-DLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTES 169 (251)
Q Consensus 94 ~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~--~~~ivg-D-dl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~ 169 (251)
+..++..-.-+.+++|-+..-+..+..+. ..|. +...+. | +-+.-+++.+++++......++.+-....|+..+.
T Consensus 111 l~~~~~~gd~Vi~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l 189 (425)
T 3ecd_A 111 MLALAKPGDTVLGMSLDAGGHLTHGAKPA-LSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDF 189 (425)
T ss_dssp HHHHCCTTCEEEEECC-------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCCSCCCH
T ss_pred HHHccCCCCEEEEcccccccceecchhhh-hcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCCCcCCH
Confidence 34343433467788886543222222211 1111 211221 2 22345899999998754566777763334887778
Q ss_pred HHHHHHHHHcCCcEEEec
Q 040341 170 IEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 170 l~~~~~a~~~g~~~ivs~ 187 (251)
-++.++|+++|+.+++-.
T Consensus 190 ~~i~~l~~~~~~~li~De 207 (425)
T 3ecd_A 190 ARFRAIADSVGAKLMVDM 207 (425)
T ss_dssp HHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEC
Confidence 889999999999888764
No 335
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=26.25 E-value=41 Score=30.56 Aligned_cols=48 Identities=19% Similarity=0.213 Sum_probs=37.9
Q ss_pred CcceeEeeccccccHHHHHHHHHHHHHc--CCcEEEecCCCCCCchhHhh
Q 040341 152 TCNALLLKVNQIGSVTESIEAVKMSKRA--GWGVMASHRSGETEDTFIAD 199 (251)
Q Consensus 152 a~n~ilIK~nqiGtlte~l~~~~~a~~~--g~~~ivs~rsgEt~d~~iad 199 (251)
..+.++|=.+|-|.-.|++++++.|++. |..++.=....++.-...+|
T Consensus 107 ~~~dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD 156 (393)
T 3odp_A 107 DEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAK 156 (393)
T ss_dssp TSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGG
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhc
Confidence 3567888899999999999999999999 88776555556665566666
No 336
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=26.17 E-value=76 Score=28.68 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=18.3
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCCCCCC
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRSGETE 193 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~ 193 (251)
-+.....++++.+++++..++|+-.-|-+.
T Consensus 90 p~~~~v~~~~~~~~~~~~d~IIavGGGs~~ 119 (387)
T 3uhj_A 90 CCTSEIERVRKVAIEHGSDILVGVGGGKTA 119 (387)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEESSHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCCcHHH
Confidence 355666666666666677777666544443
No 337
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=26.11 E-value=3e+02 Score=24.28 Aligned_cols=83 Identities=11% Similarity=0.018 Sum_probs=49.1
Q ss_pred ChhhHHHHHHHhhhcCCceee-----cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeec
Q 040341 86 SGDGLKNVYRSFISDHPIVSI-----EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 160 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~I-----EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~ 160 (251)
|.+|.+....+| .+.++.++ |....++|.+.+.+-..++ |+..-..+....+-||+
T Consensus 60 t~~ea~~~~~~l-~~~G~~~~ld~lgE~~~~~~~a~~~~~~yl~~------------------i~~i~~~~~~~~vSvKl 120 (327)
T 2ekg_A 60 TLEEALKAAEAL-EREGVHAILDLLGEMVRTEEEARAFQRGLLEL------------------VWALAGKPWPKYISLXL 120 (327)
T ss_dssp SHHHHHHHHHHH-HHTTCEEEEEEECSCCCSHHHHHHHHHHHHHH------------------HHHHTTCSSCEEEEECG
T ss_pred CHHHHHHHHHHH-HhCCCEEEEeccccccCCHHHHHHHHHHHHHH------------------HHHHHhcCCCCeEEEEc
Confidence 677888888885 55565444 4454444444433211111 11111123456778898
Q ss_pred cccc-------cHHHHHHHHHHHHHcCCcEEEec
Q 040341 161 NQIG-------SVTESIEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 161 nqiG-------tlte~l~~~~~a~~~g~~~ivs~ 187 (251)
+++| -+....++++.|+++|..++|-.
T Consensus 121 Salg~~~~~~~~~~rl~~i~~~A~~~gv~v~IDa 154 (327)
T 2ekg_A 121 TQLGLDLSEDLALALLREVLREAEPRGVFVRLDM 154 (327)
T ss_dssp GGGTTTTCHHHHHHHHHHHHHHHGGGTEEEEECC
T ss_pred ccCccccCHHHHHHHHHHHHHHHHHcCCEEEEcC
Confidence 8887 45556677788888888888855
No 338
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.07 E-value=1.8e+02 Score=20.69 Aligned_cols=80 Identities=8% Similarity=0.062 Sum_probs=44.7
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.. ..+.++.+.--+...| ++-...+.+. ...++|+ ... .+.+.+.++++.| +..++.||-.
T Consensus 36 ~~~~a~~~l~~--~~~dlvllD~~l~~~~g~~l~~~l~~~-~~~~~ii~ls~~---~~~~~~~~~~~~g-a~~~l~KP~~ 108 (137)
T 3cfy_A 36 TGRDAIQFIER--SKPQLIILDLKLPDMSGEDVLDWINQN-DIPTSVIIATAH---GSVDLAVNLIQKG-AEDFLEKPIN 108 (137)
T ss_dssp SHHHHHHHHHH--HCCSEEEECSBCSSSBHHHHHHHHHHT-TCCCEEEEEESS---CCHHHHHHHHHTT-CSEEEESSCC
T ss_pred CHHHHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhc-CCCCCEEEEEec---CcHHHHHHHHHCC-ccEEEeCCCC
Confidence 45566665544 3556776655454433 3334445443 2334443 222 3566777777775 5678999976
Q ss_pred cccHHHHHHH
Q 040341 163 IGSVTESIEA 172 (251)
Q Consensus 163 iGtlte~l~~ 172 (251)
...+.++++.
T Consensus 109 ~~~L~~~i~~ 118 (137)
T 3cfy_A 109 ADRLKTSVAL 118 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666555544
No 339
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=25.99 E-value=1.7e+02 Score=25.01 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=27.2
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEE
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~iv 185 (251)
.+.++|=.+|-|.-.|++++++.|++.|..++.
T Consensus 79 ~~dlvI~iS~SG~T~e~~~a~~~ak~~g~~~ia 111 (302)
T 1tzb_A 79 RDGLLIAVSYSGNTIETLYTVEYAKRRRIPAVA 111 (302)
T ss_dssp SSSEEEEECSSSCCHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEE
Confidence 455677789999999999999999999977643
No 340
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=25.87 E-value=1.3e+02 Score=25.51 Aligned_cols=101 Identities=8% Similarity=-0.017 Sum_probs=63.7
Q ss_pred ChhhHHHHHHHhh--hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEc-c--cccccCHHHHHHHHhccCcceeEee-
Q 040341 86 SGDGLKNVYRSFI--SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG-D--DLLVTNPKRVEKAIKEKTCNALLLK- 159 (251)
Q Consensus 86 s~~elid~~~~l~--~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg-D--dl~vtn~~~i~~~i~~~a~n~ilIK- 159 (251)
+..+.+......+ +.-.-+.+.+|-...-...|..+.+..|.++..+- | +-+..+++.+++.+..+ ..++++-
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~ 162 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPK-TRLVILSH 162 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTT-EEEEEEES
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCC-ceEEEEec
Confidence 3556666555544 22236777888777666678777777765654443 2 22445688888877643 4455553
Q ss_pred c-cccccHHHHHHHHHHHH----HcCCcEEEec
Q 040341 160 V-NQIGSVTESIEAVKMSK----RAGWGVMASH 187 (251)
Q Consensus 160 ~-nqiGtlte~l~~~~~a~----~~g~~~ivs~ 187 (251)
| |-.|.+...-++.++|+ ++|+.+++-.
T Consensus 163 ~~nptG~~~~~~~i~~l~~~~~~~~~~~li~De 195 (390)
T 1elu_A 163 LLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDG 195 (390)
T ss_dssp BCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEEC
T ss_pred cccCCceecCHHHHHHHHhhhhhhcCcEEEEEc
Confidence 2 23566666667888999 8998887754
No 341
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=25.83 E-value=2.6e+02 Score=22.39 Aligned_cols=81 Identities=10% Similarity=0.100 Sum_probs=45.6
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-.+.+.+. +..++|+ ... .+.+.+.++++.| ++.++.||-.
T Consensus 55 ~~~~al~~~~~--~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~~~ii~lt~~---~~~~~~~~~~~~G-a~~yl~Kp~~ 127 (250)
T 3r0j_A 55 NGAQALDRARE--TRPDAVILDVXMPGMDGFGVLRRLRAD-GIDAPALFLTAR---DSLQDKIAGLTLG-GDDYVTKPFS 127 (250)
T ss_dssp SHHHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHT-TCCCCEEEEECS---TTHHHHHHHHTST-TCEEEESSCC
T ss_pred CHHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEECC---CCHHHHHHHHHcC-CcEEEeCCCC
Confidence 45666665544 3555776655554434 3334444443 2234443 222 3567777888776 5778999986
Q ss_pred cccHHHHHHHH
Q 040341 163 IGSVTESIEAV 173 (251)
Q Consensus 163 iGtlte~l~~~ 173 (251)
...+..+++.+
T Consensus 128 ~~~L~~~i~~~ 138 (250)
T 3r0j_A 128 LEEVVARLRVI 138 (250)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555443
No 342
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=25.83 E-value=1.7e+02 Score=24.76 Aligned_cols=102 Identities=17% Similarity=0.158 Sum_probs=62.6
Q ss_pred ChhhHHHHHHHh-hhcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhc-cCcceeEeec--
Q 040341 86 SGDGLKNVYRSF-ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKE-KTCNALLLKV-- 160 (251)
Q Consensus 86 s~~elid~~~~l-~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~-~a~n~ilIK~-- 160 (251)
+..+.+...... ++.=.-+.+.+|-.... .|....+..|-++..+ -|+-...+++.++++++. ....++++-.
T Consensus 79 g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 156 (386)
T 2dr1_A 79 SGTGIMEASIRNGVSKGGKVLVTIIGAFGK--RYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNE 156 (386)
T ss_dssp CHHHHHHHHHHHHSCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred ChHHHHHHHHHHhhcCCCeEEEEcCCchhH--HHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeec
Confidence 345555544443 33333667777754221 1666666666554333 233234579999998863 3455666653
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
|-.|.+.+.-+++++|+++|+.+++-.-.
T Consensus 157 nptG~~~~l~~i~~l~~~~~~~li~D~a~ 185 (386)
T 2dr1_A 157 TSTGVLNPLPELAKVAKEHDKLVFVDAVS 185 (386)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCcchhCCHHHHHHHHHHcCCeEEEEccc
Confidence 34677777788889999999988876543
No 343
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=25.82 E-value=2.8e+02 Score=23.52 Aligned_cols=97 Identities=19% Similarity=0.164 Sum_probs=59.0
Q ss_pred hhhHHHHHHHhh-hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEc-cc--ccccCHHHHHHHHhccCcceeEe-ecc
Q 040341 87 GDGLKNVYRSFI-SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG-DD--LLVTNPKRVEKAIKEKTCNALLL-KVN 161 (251)
Q Consensus 87 ~~elid~~~~l~-~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivg-Dd--l~vtn~~~i~~~i~~~a~n~ilI-K~n 161 (251)
..+.+......+ +.=.-+.+.+|-.. +|....+..|.++..+- |+ -+.-+++.+++++..+ ..++++ -|+
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~ 173 (388)
T 1j32_A 99 GKQSIFNLMLAMIEPGDEVIIPAPFWV----SYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK-TKLLVFNTPS 173 (388)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCT----HHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT-EEEEEEESSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCh----hHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC-ceEEEEeCCC
Confidence 456666555543 32236778888653 45555556665544332 21 1334789999888653 344443 343
Q ss_pred -ccccH---HHHHHHHHHHHHcCCcEEEecC
Q 040341 162 -QIGSV---TESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 162 -qiGtl---te~l~~~~~a~~~g~~~ivs~r 188 (251)
-.|.+ .+.-+++++|+++|..+++-.-
T Consensus 174 nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 204 (388)
T 1j32_A 174 NPTGMVYTPDEVRAIAQVAVEAGLWVLSDEI 204 (388)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 35665 5777888999999998888653
No 344
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=25.80 E-value=94 Score=28.94 Aligned_cols=76 Identities=14% Similarity=0.214 Sum_probs=53.2
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCC--ceEEEcccccccCHHHHHHHHhccC-cceeEeeccccccHHHHHHHHHHHHHc
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGR--HVQIVGDDLLVTNPKRVEKAIKEKT-CNALLLKVNQIGSVTESIEAVKMSKRA 179 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~--~~~ivgDdl~vtn~~~i~~~i~~~a-~n~ilIK~nqiGtlte~l~~~~~a~~~ 179 (251)
++.|-- .+.|-+...++-+.+-+ .+|||-| .||+-++.+++.++ -+.++.-.+.- ..-++..+|+++
T Consensus 130 ~I~l~~--~~~dpe~~~~~Vk~V~e~~dvPlsID----~dp~vleaale~~~d~~pLIns~t~e----n~~~~~~la~~y 199 (445)
T 2h9a_A 130 LVALKG--SSQDAATFAKAVATAREVTDLPFILI----GTPEQLAAALETEGANNPLLYAATAD----NYEQMVELAKKY 199 (445)
T ss_dssp EEEEEC--TTCCHHHHHHHHHHHHHHCCSCEEEE----SCHHHHHHHHHHHGGGCCEEEEECTT----THHHHHHHHHHH
T ss_pred EEEEeC--CCCCHHHHHHHHHHHHHhcCCCEEEE----CCHHHHHHHHHhcCCCCCEEEECCHH----HHHHHHHHHHHh
Confidence 555543 56677777776555532 6789988 69999999998876 56666555532 234567788999
Q ss_pred CCcEEEecC
Q 040341 180 GWGVMASHR 188 (251)
Q Consensus 180 g~~~ivs~r 188 (251)
++.+++...
T Consensus 200 ~~~vV~~~~ 208 (445)
T 2h9a_A 200 NVPLTVSAK 208 (445)
T ss_dssp TCCEEEECS
T ss_pred CCeEEEEcC
Confidence 999988664
No 345
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.78 E-value=64 Score=26.54 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=30.3
Q ss_pred HHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEec
Q 040341 145 EKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 145 ~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~ 187 (251)
++.+-...++++++=|.-.||+.|+.++.. ++.++++=.
T Consensus 111 Rk~~m~~~sda~IvlpGG~GTL~E~~eal~----~~kPV~lln 149 (195)
T 1rcu_A 111 RSFVLLRNADVVVSIGGEIGTAIEILGAYA----LGKPVILLR 149 (195)
T ss_dssp HHHHHHTTCSEEEEESCCHHHHHHHHHHHH----TTCCEEEET
T ss_pred HHHHHHHhCCEEEEecCCCcHHHHHHHHHh----cCCCEEEEC
Confidence 344445578899999999999999999976 577776653
No 346
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=25.77 E-value=2.2e+02 Score=25.89 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=60.2
Q ss_pred hhhHHHHHHHhhh--cCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccc--cccCHHHHHHHHhcc-----Ccce-
Q 040341 87 GDGLKNVYRSFIS--DHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDL--LVTNPKRVEKAIKEK-----TCNA- 155 (251)
Q Consensus 87 ~~elid~~~~l~~--~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl--~vtn~~~i~~~i~~~-----a~n~- 155 (251)
..+.+......+- .=.-|.+++|-. ..|....+..|.++.-+ .|+- +-.+++.++++++.. ...+
T Consensus 166 ~~~al~~~~~~l~~~~gd~Vlv~~p~y----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~i 241 (500)
T 3tcm_A 166 ASPGVHLMMQLLIRNEKDGILVPIPQY----PLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRAL 241 (500)
T ss_dssp SHHHHHHHHHHHCCSTTEEEEEEESCC----THHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCCc----HhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEE
Confidence 3455555555443 223788999966 46666666666543322 3331 356899999988752 2233
Q ss_pred eEeeccc-cc---cHHHHHHHHHHHHHcCCcEEEecC
Q 040341 156 LLLKVNQ-IG---SVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 156 ilIK~nq-iG---tlte~l~~~~~a~~~g~~~ivs~r 188 (251)
+++-||- .| +..+..+++++|+++|+.+++-.-
T Consensus 242 vl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Dea 278 (500)
T 3tcm_A 242 VVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEV 278 (500)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred EEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 3444532 34 347788889999999998887643
No 347
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Probab=25.71 E-value=83 Score=23.85 Aligned_cols=53 Identities=21% Similarity=0.137 Sum_probs=38.9
Q ss_pred cccccCHHHHHHHHhccCcceeEeecccc--c---cHHHHHHHHHHHHHcCCcEEEec
Q 040341 135 DLLVTNPKRVEKAIKEKTCNALLLKVNQI--G---SVTESIEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 135 dl~vtn~~~i~~~i~~~a~n~ilIK~nqi--G---tlte~l~~~~~a~~~g~~~ivs~ 187 (251)
+..+-.++.+.+|++.++...++|-=+-+ . .-...+++++.+++.|-.+.|=+
T Consensus 37 g~~~yG~~eV~~Ale~GAVetLLI~d~l~r~~d~~~~~~~~el~e~~~~~G~~V~ivs 94 (124)
T 1x52_A 37 DRAFYGLKQVEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFS 94 (124)
T ss_dssp GGEEESHHHHHHHHHTTCEEEEEEEHHHHTCSSHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcEEECHHHHHHHHHcCCccEEEechhhhcCCChHHHHHHHHHHHHHHHcCCEEEEEC
Confidence 45667888999999999999988865422 1 23446677889999999985533
No 348
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=25.60 E-value=1.1e+02 Score=27.45 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=46.7
Q ss_pred HHHHHhhhCCceEEEc----ccccccCHHHHHHHH-hc---cCcceeE-eec-cccccHHHHHHHHHHHHHcCCcEEEec
Q 040341 118 HAELTGKIGRHVQIVG----DDLLVTNPKRVEKAI-KE---KTCNALL-LKV-NQIGSVTESIEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 118 ~~~l~~~lg~~~~ivg----Ddl~vtn~~~i~~~i-~~---~a~n~il-IK~-nqiGtlte~l~~~~~a~~~g~~~ivs~ 187 (251)
+.+..+..|-++..+- |+-+..+++.+++++ +. ...-.++ .-| |-.|++.+.-++.++|+++|+.++|-.
T Consensus 189 ~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~ 268 (456)
T 2z67_A 189 PIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIING 268 (456)
T ss_dssp HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEEC
Confidence 4444455555543331 333567899999998 42 2222232 234 568999999999999999999999984
Q ss_pred C
Q 040341 188 R 188 (251)
Q Consensus 188 r 188 (251)
-
T Consensus 269 A 269 (456)
T 2z67_A 269 A 269 (456)
T ss_dssp T
T ss_pred c
Confidence 3
No 349
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=25.60 E-value=48 Score=30.40 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=22.6
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv 185 (251)
.+.||..+..+.++.|+++|++||+
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~Vil 99 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYG 99 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3589999999999999999999955
No 350
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=25.55 E-value=38 Score=30.14 Aligned_cols=53 Identities=21% Similarity=0.333 Sum_probs=35.8
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcC-CcEEEecCCCCCCchhHhhhhhhcc
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAG-WGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g-~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
.+.++|=.+|-|.-.+++++++.|++.| ..++.=....++.-...+|..+-+.
T Consensus 99 ~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~~~ 152 (368)
T 1moq_A 99 RNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTN 152 (368)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEEcC
Confidence 4556777899999999999999999999 7664433334444444455444333
No 351
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=25.53 E-value=2.1e+02 Score=21.38 Aligned_cols=68 Identities=16% Similarity=0.117 Sum_probs=44.4
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 23 GFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 23 Gfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
.|-|++. .++..+.|.-+| +.||. |++..+-...++ +.|=..++.|-. ...++++.+.-+.+-.+.||
T Consensus 17 SyLP~lt-~eqI~kQV~Yll-~qGw~----p~iEf~d~~~~~---~~yW~mwklPmf---~~~d~~~Vl~El~~C~k~~p 84 (110)
T 1svd_M 17 SYLPPMN-AERIRAQIKYAI-AQGWS----PGIEHVEVKNSM---NQYWYMWKLPFF---GEQNVDNVLAEIEACRSAYP 84 (110)
T ss_dssp TTSCCCC-HHHHHHHHHHHH-HTTCE----EEEEEECGGGTT---CSCCEEESCCCT---TCCCHHHHHHHHHHHHHHST
T ss_pred ccCCCCC-HHHHHHHHHHHH-HCCCe----eEEEeccCCccC---CcEEeecccCCc---CCCCHHHHHHHHHHHHHHCC
Confidence 4678885 588999999999 78994 555555444554 567333333322 24567777777777556788
No 352
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=25.42 E-value=48 Score=30.42 Aligned_cols=25 Identities=24% Similarity=0.264 Sum_probs=22.7
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv 185 (251)
.+.||..+..+.++.|+++|++||+
T Consensus 77 p~~Gt~~df~~Lv~~aH~~Gi~Vil 101 (485)
T 1wpc_A 77 TKYGTRSQLQAAVTSLKNNGIQVYG 101 (485)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4689999999999999999999965
No 353
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=25.38 E-value=85 Score=27.11 Aligned_cols=98 Identities=9% Similarity=-0.022 Sum_probs=54.9
Q ss_pred hHHHHH-HHhhhcCCceeecCCCCcccHHHHHHHH---hhhCCceEEEcccccccCHHHHHHHHhccCcceeEe-ecccc
Q 040341 89 GLKNVY-RSFISDHPIVSIEDPFDQDDWEHHAELT---GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL-KVNQI 163 (251)
Q Consensus 89 elid~~-~~l~~~ypI~~IEDP~~e~D~~~~~~l~---~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI-K~nqi 163 (251)
+.+... ..+++.-..+.+.+|.+..-...+..+. ..+ ..+++--|+-...+++.+++++......++++ -||.
T Consensus 103 ~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~- 180 (420)
T 3gbx_A 103 QANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLY-NIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAY- 180 (420)
T ss_dssp HHHHHHHHHHCCTTCEEEEEEEC------------CHHHHS-EEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTC-
T ss_pred HHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccce-eEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCcc-
Confidence 444443 4444444477777776543222222211 111 12333233334568999999988755677777 4554
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
|++.+.-++.++|+++|+.+++-.-
T Consensus 181 ~~~~~l~~l~~l~~~~~~~li~De~ 205 (420)
T 3gbx_A 181 SGVVDWAKMREIADSIGAYLFVDMA 205 (420)
T ss_dssp CSCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCccCHHHHHHHHHHcCCEEEEECC
Confidence 7777777889999999998887653
No 354
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=25.23 E-value=1.5e+02 Score=26.57 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=40.2
Q ss_pred hhhC-CceEEEccccccc-C--HHHHHHHHhccCcceeEee-ccccccHHHHHHHHHHHHHcCCcEEEecCCCCC
Q 040341 123 GKIG-RHVQIVGDDLLVT-N--PKRVEKAIKEKTCNALLLK-VNQIGSVTESIEAVKMSKRAGWGVMASHRSGET 192 (251)
Q Consensus 123 ~~lg-~~~~ivgDdl~vt-n--~~~i~~~i~~~a~n~ilIK-~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt 192 (251)
+++| .++.||.|+-++. + .+++...++........+. .-.--++....++++.+++++..++|+-.-|-+
T Consensus 39 ~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 113 (407)
T 1vlj_A 39 KNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV 113 (407)
T ss_dssp HHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred HHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH
Confidence 3344 5677776632222 2 4555555543223333322 112247888888888889999999887764444
No 355
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=25.20 E-value=49 Score=30.09 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=26.7
Q ss_pred cccccHHHHHHHHHHHHHcCCcEE----EecCCCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVM----ASHRSGET 192 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~i----vs~rsgEt 192 (251)
.+.||..+..+.++.|+++|++|| +-|.+.+.
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~~ 94 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGS 94 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEECSEECSSC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeeccccCCC
Confidence 368999999999999999999995 46666554
No 356
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=25.09 E-value=3.2e+02 Score=23.34 Aligned_cols=144 Identities=17% Similarity=0.172 Sum_probs=77.1
Q ss_pred cHHHHHHHHHHHHhcCCccceeeeeehhh---hc-----cccc---CCcceeecCCCCCCCCCCccChhhHHHHHHHhhh
Q 040341 31 SYEGFELLKTAIAKGGYIGKIVIGMDVAA---SE-----FYDS---KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 99 (251)
Q Consensus 31 ~eeal~~i~~Ai~~aGy~~kI~iglD~Aa---se-----~~~~---~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~ 99 (251)
.+++.+.|..|+ ++||+- +|.|. +| +... .+..+-+..|. ....++++.+...+.+-++
T Consensus 46 ~~~~~~~v~~Al-~~Gi~~-----~DTA~~Yg~E~~lG~al~~~~~~R~~v~I~TK~----~~~~~~~~~i~~~~e~SL~ 115 (298)
T 3up8_A 46 GAEVLRILPQAL-KLGFRH-----VDTAQIYGNEAEVGEAIQKSGIPRADVFLTTKV----WVDNYRHDAFIASVDESLR 115 (298)
T ss_dssp HHHHHHHHHHHH-HHTCCE-----EECCTTTTCHHHHHHHHHHHTCCGGGCEEEEEE----CGGGCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCE-----EECCCcccCHHHHHHHHHHcCCChHHEEEEecc----CCCCCCHHHHHHHHHHHHH
Confidence 589999999999 789872 23321 00 1110 11234444332 1123456665554444343
Q ss_pred c----C-CceeecCCCCcccH-HHHHHHHhhh-CCceEEEcccccccCHHHHHHHHhccCcceeEeecccc--ccHHHHH
Q 040341 100 D----H-PIVSIEDPFDQDDW-EHHAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI--GSVTESI 170 (251)
Q Consensus 100 ~----y-pI~~IEDP~~e~D~-~~~~~l~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqi--Gtlte~l 170 (251)
+ | .+.+|-.|-...++ +.|..|.+-. ..++--+| ++..+++.++++++...... -.||+ .-+..--
T Consensus 116 rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iG--vSn~~~~~l~~~~~~~~~~~---~~~Q~~~~~~~~~~ 190 (298)
T 3up8_A 116 KLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIG--ISNFNTTQMEEAARLSDAPI---ATNQVEYHPYLDQT 190 (298)
T ss_dssp HHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEE--EESCCHHHHHHHHHHCSSCE---EEEEEECBTTBCCH
T ss_pred HhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEE--EcCCCHHHHHHHHHhCCCCc---eEEEEecccccccH
Confidence 3 3 37788888765444 3455554332 12566665 34557889988876532111 11221 1111123
Q ss_pred HHHHHHHHcCCcEEEecCC
Q 040341 171 EAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 171 ~~~~~a~~~g~~~ivs~rs 189 (251)
+.+..|+++|+.++.-.-.
T Consensus 191 ~l~~~~~~~gi~v~a~spL 209 (298)
T 3up8_A 191 KVLQTARRLGMSLTSYYAM 209 (298)
T ss_dssp HHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHCCCEEEEECCC
Confidence 6888999999999876543
No 357
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=25.04 E-value=2e+02 Score=26.30 Aligned_cols=70 Identities=7% Similarity=0.099 Sum_probs=40.9
Q ss_pred cChhhHHHHHHHhhhc-CCceeec--C----------CCCc--ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHh
Q 040341 85 VSGDGLKNVYRSFISD-HPIVSIE--D----------PFDQ--DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIK 149 (251)
Q Consensus 85 ~s~~elid~~~~l~~~-ypI~~IE--D----------P~~e--~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~ 149 (251)
++.+|.+++.+.| .+ .++-+|. . |... .++.--+.+.+.++.+++|++-- -+++++.++++++
T Consensus 261 ~~~ed~~~la~~L-~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~G-gI~t~e~Ae~~L~ 338 (419)
T 3l5a_A 261 YTIDEFNQLIDWV-MDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASG-GINSPESALDALQ 338 (419)
T ss_dssp ECHHHHHHHHHHH-HHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECS-SCCSHHHHHHHGG
T ss_pred CCHHHHHHHHHHH-HhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEEC-CCCCHHHHHHHHH
Confidence 4566777766664 55 5543332 1 1111 13334455666675456666554 4689999999998
Q ss_pred ccCcceeEe
Q 040341 150 EKTCNALLL 158 (251)
Q Consensus 150 ~~a~n~ilI 158 (251)
. ++.|.+
T Consensus 339 ~--aDlVai 345 (419)
T 3l5a_A 339 H--ADMVGM 345 (419)
T ss_dssp G--CSEEEE
T ss_pred h--CCcHHH
Confidence 7 776554
No 358
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=25.03 E-value=52 Score=29.96 Aligned_cols=31 Identities=29% Similarity=0.508 Sum_probs=26.4
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSGE 191 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsgE 191 (251)
.+.||..+..+.++.|+++|++||+ .|.+.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 115 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGG 115 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECcccccCC
Confidence 4689999999999999999999965 566654
No 359
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.99 E-value=50 Score=30.31 Aligned_cols=25 Identities=16% Similarity=0.171 Sum_probs=22.6
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv 185 (251)
.+.||..+..+.++.|+++|++||+
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~Vil 97 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYG 97 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4679999999999999999999955
No 360
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=24.98 E-value=1.5e+02 Score=26.56 Aligned_cols=70 Identities=23% Similarity=0.212 Sum_probs=50.2
Q ss_pred HHHHHhccCcceeEeec-cccccHH-HHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 144 VEKAIKEKTCNALLLKV-NQIGSVT-ESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 144 i~~~i~~~a~n~ilIK~-nqiGtlt-e~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
++.+++.+ +++++|=. +.-|-+. +.++.+..|-++|+.++-+...--++++-++.+|-.-+...+-++-|
T Consensus 82 ~~~al~~~-~d~lvig~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~~ 153 (350)
T 2g0t_A 82 VEKAKEMG-AEVLIIGVSNPGGYLEEQIATLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRIP 153 (350)
T ss_dssp HHHHHHTT-CCEEEECCCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSSC
T ss_pred HHHHHhcC-CCEEEEEecCCCCCCCHHHHHHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCcC
Confidence 46666555 88899855 4334444 78888999999999999999887888888888887666555555544
No 361
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=24.85 E-value=2.1e+02 Score=21.43 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=44.1
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 23 GFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 23 Gfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
.|-|++. .++..+.|.-+| ..||. |++..+-...++ +.|=..++.|-. ...++++.+.-+.+-...||
T Consensus 15 SyLP~lt-~eqI~kQI~Yll-~qGw~----p~lEf~d~~~~~---~~yW~mwklPmf---~~~d~~~Vl~Ele~C~k~~p 82 (109)
T 1rbl_M 15 SYLPPLS-DRQIAAQIEYMI-EQGFH----PLIEFNEHSNPE---EFYWTMWKLPLF---ACAAPQQVLDEVRECRSEYG 82 (109)
T ss_dssp TTSSCCC-HHHHHHHHHHHH-HHTCE----EEEEEESCCCTT---CCCCEECSSCCT---TCCCHHHHHHHHHHHHHHCT
T ss_pred ccCCCCC-HHHHHHHHHHHH-HCCCE----EEEEeccCcccc---ccEEeecccCCc---CCCCHHHHHHHHHHHHHHCC
Confidence 4678885 588899999999 68984 555555444444 567333443322 24567777777777556788
No 362
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=24.77 E-value=81 Score=27.61 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=55.9
Q ss_pred eEEEcccccccCHHHHH-HHHhccC--------cceeEeecccc---ccHHHHHHHHHHHHHcCCcEEEecCCCCCCchh
Q 040341 129 VQIVGDDLLVTNPKRVE-KAIKEKT--------CNALLLKVNQI---GSVTESIEAVKMSKRAGWGVMASHRSGETEDTF 196 (251)
Q Consensus 129 ~~ivgDdl~vtn~~~i~-~~i~~~a--------~n~ilIK~nqi---Gtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~ 196 (251)
+.+++---..-..+.++ ++...+. ...++||.|++ |++.++++.++..-.....++|+..+-|.
T Consensus 134 ~~~~~tRkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vlik~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee---- 209 (299)
T 2jbm_A 134 GHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFALKVEVECSSLQE---- 209 (299)
T ss_dssp SEEECCSCCCTTCHHHHHHHHHHTTCBCCCCSTTSSEEECHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEESSHHH----
T ss_pred eEEeecCCCChhhHHHHHHHHHHCCCCceecCccceEEecccHHHHcCCHHHHHHHHHHhCCcCCeEEEecCCHHH----
Confidence 76766653222223333 3444333 34788999886 67788887777655445678887764422
Q ss_pred HhhhhhhcccCccccCCCCchhHHHHhhHHH
Q 040341 197 IADLSVGLATGQIKTGAPCRSERLAKYNQLL 227 (251)
Q Consensus 197 iadLAva~~~~~ik~G~~~r~Er~aKyN~ll 227 (251)
+.-|+..++.+|+++... .+-+.+.-+.+
T Consensus 210 -~~~A~~aGaD~I~ld~~~-~~~l~~~v~~l 238 (299)
T 2jbm_A 210 -AVQAAEAGADLVLLDNFK-PEELHPTATVL 238 (299)
T ss_dssp -HHHHHHTTCSEEEEESCC-HHHHHHHHHHH
T ss_pred -HHHHHHcCCCEEEECCCC-HHHHHHHHHHh
Confidence 334556789999998753 45555444433
No 363
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=24.45 E-value=46 Score=29.32 Aligned_cols=51 Identities=18% Similarity=0.177 Sum_probs=36.5
Q ss_pred eeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcc
Q 040341 155 ALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205 (251)
Q Consensus 155 ~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~ 205 (251)
.++|=.+|-|.-.+++++++.|++.|..++.=....++.-...+|..+-+.
T Consensus 102 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~~~ 152 (342)
T 1j5x_A 102 GLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFP 152 (342)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEECC
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEEcC
Confidence 677778999999999999999999997775444444554455555544433
No 364
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.39 E-value=2.5e+02 Score=23.53 Aligned_cols=84 Identities=17% Similarity=0.079 Sum_probs=59.0
Q ss_pred ceeecCCCCcccHHHH--HHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC
Q 040341 103 IVSIEDPFDQDDWEHH--AELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~--~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g 180 (251)
|+..=-|-+.+|+-.+ +.+-+.-|-++...|-++ .++.+..++.....+.|.|......++....+.++..++.|
T Consensus 126 vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v---p~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~ 202 (258)
T 2i2x_B 126 VVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV---PAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENG 202 (258)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC---CSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTT
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC---CHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcC
Confidence 4444444445565443 344455577776777663 56777777777789999998877788888888888888876
Q ss_pred --CcEEEecCC
Q 040341 181 --WGVMASHRS 189 (251)
Q Consensus 181 --~~~ivs~rs 189 (251)
+++|||...
T Consensus 203 ~~~~v~vGG~~ 213 (258)
T 2i2x_B 203 IKIPFACGGGA 213 (258)
T ss_dssp CCCCEEEESTT
T ss_pred CCCcEEEECcc
Confidence 788999863
No 365
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=24.35 E-value=39 Score=31.67 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=44.1
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE----EEecCCCCCCchhHhhhhhhcccCccccCCCCchhHH
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV----MASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERL 220 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~----ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~ 220 (251)
+..+-+.|++++||+....+| ++.++++.+++|++- +|.....|+.+..+.|=.| ..-.++|+..-+.++
T Consensus 164 a~ALaaGNtVVlKPse~tp~t-a~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v---~~I~FTGS~~~G~~i 237 (490)
T 2wme_A 164 APALAAGNAMIFKPSEVTPLT-ALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLI---EKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHTTCEEEEECCTTSCHH-HHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTC---CEEEEESCHHHHHHH
T ss_pred HHHHHcCCeEEEECCcCCHHH-HHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCC---CEEEEECChHHHHHH
Confidence 445669999999999987776 667889999998863 3433222333222222222 335578877666555
No 366
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=24.32 E-value=1.3e+02 Score=26.29 Aligned_cols=147 Identities=14% Similarity=0.018 Sum_probs=79.9
Q ss_pred cCCCCCcHHHHHHHHHHHHhcCCcc--ceeeeeehhh-hcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHh-hhc
Q 040341 25 APNIQESYEGFELLKTAIAKGGYIG--KIVIGMDVAA-SEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF-ISD 100 (251)
Q Consensus 25 ap~~~~~eeal~~i~~Ai~~aGy~~--kI~iglD~Aa-se~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l-~~~ 100 (251)
.|++...++.++.+.++++..-|.+ ...-.+--+. .+++.. ..+.+-+. + . .+.+.-.+..+ +..
T Consensus 9 ~p~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~l~~~~~a~~~g~--~~~~v~~~------s-g--t~al~~al~~l~~~~ 77 (377)
T 3ju7_A 9 RASTVPVIEYLDELKEIDASHIYTNYGPINQRFEQTIMSGFFQN--RGAVTTVA------N-A--TLGLMAAIQLKKRKK 77 (377)
T ss_dssp CCCCCCGGGGHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHTSTT--CSEEEEES------C-H--HHHHHHHHHHHSCTT
T ss_pred CCCCCCcHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHhCC--CCeEEEeC------C-H--HHHHHHHHHHcCCCC
Confidence 5888888999999999985433331 1111112233 445541 23444321 1 1 12333334443 333
Q ss_pred CCceeecCCCCcccHHHHHHHHhhhCCceEEE-cc-cccccCHHHHHHHHhccC--cceeEeeccccccHHHHHHHHHHH
Q 040341 101 HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GD-DLLVTNPKRVEKAIKEKT--CNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 101 ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gD-dl~vtn~~~i~~~i~~~a--~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
=.-|.+-+|-... +.......|-++..+ .| +-+.-+++.+++++.... ..+|++ .|-.|++.+.-++.++|
T Consensus 78 Gd~Vi~~~~~~~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~-~~~~G~~~~~~~i~~la 152 (377)
T 3ju7_A 78 GKYALMPSFTFPA----TPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVP-YATFGSWMNLEEYEELE 152 (377)
T ss_dssp CCEEEEESSSCTH----HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECC-BCGGGBCCCCHHHHHHH
T ss_pred cCEEEECCCCcHH----HHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEE-ECCCCCccCHHHHHHHH
Confidence 2355666665533 333444556544333 22 224568999999883222 444442 34568777777888899
Q ss_pred HHcCCcEEEecC
Q 040341 177 KRAGWGVMASHR 188 (251)
Q Consensus 177 ~~~g~~~ivs~r 188 (251)
+ +|+.+++-.-
T Consensus 153 ~-~~~~vi~D~a 163 (377)
T 3ju7_A 153 K-KGVPVVVDAA 163 (377)
T ss_dssp H-TTCCBEEECT
T ss_pred h-cCCEEEEECC
Confidence 9 9998887653
No 367
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=24.12 E-value=3.3e+02 Score=23.16 Aligned_cols=95 Identities=8% Similarity=-0.004 Sum_probs=59.1
Q ss_pred hhhHHHHHHHhh-hcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhcc---CcceeEeec--
Q 040341 87 GDGLKNVYRSFI-SDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK---TCNALLLKV-- 160 (251)
Q Consensus 87 ~~elid~~~~l~-~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~---a~n~ilIK~-- 160 (251)
..+.+......+ +.-..+.+++|.+.. +....+..|.++..+ + +.+++.+++.++.. ...++++=+
T Consensus 112 gt~a~~~~~~~~~~~gd~V~~~~p~~~~----~~~~~~~~g~~~~~v-~---~~d~~~l~~~l~~~~~~~~~~v~~~~~~ 183 (398)
T 3a2b_A 112 GFQSNLGPLSCLMGRNDYILLDERDHAS----IIDGSRLSFSKVIKY-G---HNNMEDLRAKLSRLPEDSAKLICTDGIF 183 (398)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEETTCCHH----HHHHHHHSSSEEEEE-C---TTCHHHHHHHHHTSCSSSCEEEEEESBC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCHH----HHHHHHHcCCceEEe-C---CCCHHHHHHHHHhhccCCceEEEEeCCC
Confidence 345555444433 333488999997743 333444555444332 2 24688999888763 344555543
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
|-.|.+...-+++++|+++|..+++-.-.
T Consensus 184 nptG~~~~~~~l~~~~~~~~~~li~De~~ 212 (398)
T 3a2b_A 184 SMEGDIVNLPELTSIANEFDAAVMVDDAH 212 (398)
T ss_dssp TTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred CCCCCccCHHHHHHHHHHcCcEEEEECCC
Confidence 33577777888899999999988876544
No 368
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=23.96 E-value=2e+02 Score=20.45 Aligned_cols=82 Identities=10% Similarity=0.032 Sum_probs=47.1
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhh-hCC--ceEEEcccccccCHHHHHHHHhccCcceeEeecc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGK-IGR--HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~-lg~--~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~n 161 (251)
+.++.++.+.+ ..+.++.+.-.+...| ++-...+.+. ... .+-++.+. .+...+.++++.+ +..++.||-
T Consensus 40 ~~~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~---~~~~~~~~~~~~g-~~~~l~kp~ 113 (147)
T 2zay_A 40 NAIEAVPVAVK--THPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGR---ATAKEEAQLLDMG-FIDFIAKPV 113 (147)
T ss_dssp SHHHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESS---CCHHHHHHHHHHT-CSEEEESSC
T ss_pred CHHHHHHHHHc--CCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCC---CCHHHHHHHHhCC-CCEEEeCCC
Confidence 55676666554 3566887776665444 3333444431 112 34344443 3566677777665 557889998
Q ss_pred ccccHHHHHHHH
Q 040341 162 QIGSVTESIEAV 173 (251)
Q Consensus 162 qiGtlte~l~~~ 173 (251)
....+.++++.+
T Consensus 114 ~~~~L~~~i~~~ 125 (147)
T 2zay_A 114 NAIRLSARIKRV 125 (147)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 766666665543
No 369
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=23.94 E-value=1.3e+02 Score=26.52 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=61.4
Q ss_pred hHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-ccccc
Q 040341 89 GLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGS 165 (251)
Q Consensus 89 elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGt 165 (251)
+.+..... +++.=.-+.+.+|....=...|..+.+..|-++..+ + ..+++.+++++..+ ...+.+- | |-.|.
T Consensus 88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~---~~d~~~l~~~i~~~-t~~v~l~~p~NptG~ 162 (404)
T 1e5e_A 88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-N---TAIPGEVKKHMKPN-TKIVYFETPANPTLK 162 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-C---TTSTTHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-C---CCCHHHHHHhcCCC-CcEEEEECCCCCCCc
Confidence 44444433 344334677788888665666665566666554333 2 12678888887643 4455553 3 56788
Q ss_pred HHHHHHHHHHHHH-cCCcEEEecCC
Q 040341 166 VTESIEAVKMSKR-AGWGVMASHRS 189 (251)
Q Consensus 166 lte~l~~~~~a~~-~g~~~ivs~rs 189 (251)
+.+.-+++++|++ +|+.+++-.--
T Consensus 163 v~~l~~i~~la~~~~~~~li~De~~ 187 (404)
T 1e5e_A 163 IIDMERVCKDAHSQEGVLVIADNTF 187 (404)
T ss_dssp CCCHHHHHHHHHTSTTCEEEEECTT
T ss_pred ccCHHHHHHHHHhhcCCEEEEECCC
Confidence 8888889999999 99988776543
No 370
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=23.82 E-value=4e+02 Score=23.94 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=77.7
Q ss_pred CCCCcHHHHHHHHHHHHhcCCc--cceeeeeehhhhcccccCCcceeecCCCC--CCCCCCccChhhHHHHHHHhh---h
Q 040341 27 NIQESYEGFELLKTAIAKGGYI--GKIVIGMDVAASEFYDSKDKTYDLNFKEE--NNDGSQKVSGDGLKNVYRSFI---S 99 (251)
Q Consensus 27 ~~~~~eeal~~i~~Ai~~aGy~--~kI~iglD~Aase~~~~~~g~Y~l~~~~~--~~d~~~~~s~~elid~~~~l~---~ 99 (251)
.+.+.+++++.... +++.|-+ .++.+-+..- |++..+ .|. |++- +++...++.-.+=+.+.++|+ .
T Consensus 59 Sied~eq~leyA~~-Lk~~~~~~~d~l~~vmR~y---~~KPRT-s~g--~kGL~nDP~ld~s~~i~~GL~~~R~ll~~~~ 131 (346)
T 3tqk_A 59 SIHDPAAAIEYATK-LKEQVKKFHKDILIIMRVY---FEKPRT-TIG--WKGFINDPDLDNSYNINKGLRLARNLLSDLT 131 (346)
T ss_dssp SCSCHHHHHHHHHH-HHHHHHHHTTTEEEEEECC---CCCCCS-SCS--CCCTTTCTTSSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH-HHHHHhhhcccceEEeeec---ccCCCC-CcC--ccccccCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 58888889987766 5555532 3444444442 333322 243 3321 223345666666556555443 5
Q ss_pred cCCce---eecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHH
Q 040341 100 DHPIV---SIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMS 176 (251)
Q Consensus 100 ~ypI~---~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a 176 (251)
++++- =+-||... + .+..-+ ..--+|=- ++.|... ++. .-+..-.|++|=.--|++.++++++.-|
T Consensus 132 e~GLpiatE~ld~~~~---q---yv~dlv--s~~aIGAR-t~enq~h-re~-asg~s~PVg~Kngt~gti~~ai~Ai~aa 200 (346)
T 3tqk_A 132 NMGLPCATEFLDVITP---Q---YFAELI--TWGAIGAR-TVESQVH-REL-ASGLSASIGFKNATNGDVQVAVDAVKSA 200 (346)
T ss_dssp HTTCCEEEECCSSSGG---G---GTGGGC--SEEEECGG-GTTCHHH-HHH-HTTCSSEEEEECCTTCCSHHHHHHHHHH
T ss_pred hcCCCEEEEecCcCCH---H---HHHHHh--heeeeCcc-cccCHHH-HHH-hcCCCCceEEeCCCCCchHHHhhHHHHH
Confidence 55432 34455432 2 223333 44466665 5667533 332 2467888999999999999999999987
Q ss_pred HHc
Q 040341 177 KRA 179 (251)
Q Consensus 177 ~~~ 179 (251)
++-
T Consensus 201 ~~p 203 (346)
T 3tqk_A 201 TYP 203 (346)
T ss_dssp TSC
T ss_pred hCC
Confidence 643
No 371
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=23.77 E-value=62 Score=25.07 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=37.0
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhccc
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLAT 206 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~ 206 (251)
+-++|=.++-|.-.+++++++.|++.|.+++.=....++ -...+|..+-+.+
T Consensus 83 ~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~~~ 134 (180)
T 1jeo_A 83 DDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIPLEV 134 (180)
T ss_dssp TCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEECCC
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEeCC
Confidence 345566778888899999999999999988655544445 5556665554443
No 372
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=23.76 E-value=54 Score=29.96 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=25.5
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSG 190 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsg 190 (251)
.+.||..+..+.++.|+++|++||+ .|.+.
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVVANHMGY 125 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCE
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECcccCCC
Confidence 4679999999999999999999965 56654
No 373
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=23.64 E-value=2.2e+02 Score=28.98 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=46.5
Q ss_pred ceeecCCCCcccHHHHHHHHhhh-------C--CceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHH
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKI-------G--RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEA 172 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~l-------g--~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~ 172 (251)
.++..|||++-|..+-.+|-+.. + -++-|||.- -.+|+.+...+..| -+.+-+.|.+|..+-.++.-
T Consensus 818 ~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~--~gdP~~~~~L~~~G-id~~S~sP~~Vp~~r~a~a~ 893 (913)
T 2x0s_A 818 GIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEH--GGDPATIGFCHKVG-LDYVSCSPFRVPVAIVAAAH 893 (913)
T ss_dssp TSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGG--GGCHHHHHHHHHHT-CSEEEECGGGHHHHHHHHHH
T ss_pred cccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCc--ccCHHHHHHHHHcC-CCEEEEChHHHHHHHHHHHH
Confidence 34678999999887777665432 2 157899986 46899888777664 45666778887666555543
No 374
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=23.58 E-value=77 Score=27.98 Aligned_cols=116 Identities=16% Similarity=0.142 Sum_probs=67.8
Q ss_pred hhHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccc
Q 040341 88 DGLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIG 164 (251)
Q Consensus 88 ~elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiG 164 (251)
.+.+..... ++..=.-+.+.+|-+..-+..|..+.+..|-++..+-- +++.+++++..+ ...|++- | |-.|
T Consensus 81 t~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~l~~~i~~~-~~~v~~~~~~n~~G 154 (412)
T 2cb1_A 81 QAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-----EPEAVREALSAK-TRAVFVETVANPAL 154 (412)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-----SHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-----CHHHHHHHhccC-CeEEEEeCCCCCCc
Confidence 344444333 23332356677787755566676655566555544422 288888888653 4455553 2 5578
Q ss_pred cHHHHHHHHHHHHHcCCcEEEecCCCCC---Cc--hhHhhhhhhcccCcc
Q 040341 165 SVTESIEAVKMSKRAGWGVMASHRSGET---ED--TFIADLSVGLATGQI 209 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~ivs~rsgEt---~d--~~iadLAva~~~~~i 209 (251)
.+.+.-+++++|+++|+.+++-.-.+.- .. ..-+|+.+.+....+
T Consensus 155 ~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~ 204 (412)
T 2cb1_A 155 LVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWA 204 (412)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTT
T ss_pred ccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccc
Confidence 8888888999999999988775422111 11 123566665555444
No 375
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=23.48 E-value=46 Score=26.24 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=29.7
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCC
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGET 192 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt 192 (251)
+-++|=.++-|.-.+++++++.|++.|..++.=.....+
T Consensus 110 ~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s 148 (196)
T 2yva_A 110 GDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGG 148 (196)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCc
Confidence 345566788899999999999999999988654443333
No 376
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=23.46 E-value=56 Score=30.38 Aligned_cols=25 Identities=24% Similarity=0.436 Sum_probs=22.6
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv 185 (251)
.+.||..+..+.++.|+++|++||+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~Vil 100 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYA 100 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3579999999999999999999965
No 377
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=23.37 E-value=3.3e+02 Score=22.88 Aligned_cols=96 Identities=11% Similarity=0.178 Sum_probs=59.2
Q ss_pred hhhHHHHHHHhhhc-CCceeecCCCCcccHHHHHHHHhhhCCceEEE-----cccccccCHHHHHHHHhccCcceeEe-e
Q 040341 87 GDGLKNVYRSFISD-HPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-----GDDLLVTNPKRVEKAIKEKTCNALLL-K 159 (251)
Q Consensus 87 ~~elid~~~~l~~~-ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-----gDdl~vtn~~~i~~~i~~~a~n~ilI-K 159 (251)
..+.+......+-+ -.-+.+++|-.. +|....+..|.++..+ .+..+.-+++.++++++. ..++++ -
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~ 172 (391)
T 4dq6_A 99 VIPAISLLINELTKANDKIMIQEPVYS----PFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCN 172 (391)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSCCT----HHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEES
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCH----HHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEEC
Confidence 45656555444433 236677888664 3555555665444322 122233478999998876 555544 3
Q ss_pred ccc-cccH---HHHHHHHHHHHHcCCcEEEecC
Q 040341 160 VNQ-IGSV---TESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 160 ~nq-iGtl---te~l~~~~~a~~~g~~~ivs~r 188 (251)
|+. .|.+ .+.-+++++|+++|+.+++-.-
T Consensus 173 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 205 (391)
T 4dq6_A 173 PHNPVGRVWTKDELKKLGDICLKHNVKIISDEI 205 (391)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEeecc
Confidence 433 5666 7888889999999998887653
No 378
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=23.36 E-value=61 Score=26.18 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=36.6
Q ss_pred cceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHh---hhhh
Q 040341 153 CNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA---DLSV 202 (251)
Q Consensus 153 ~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~ia---dLAv 202 (251)
.+-++|=.++-|.-.+++++++.|++.|.+++.=.....+.-..++ |+.+
T Consensus 114 ~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l 166 (201)
T 3trj_A 114 EDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIEL 166 (201)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEE
Confidence 3445666888899999999999999999998765554555444455 5544
No 379
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=23.29 E-value=1.3e+02 Score=24.52 Aligned_cols=43 Identities=5% Similarity=0.112 Sum_probs=32.3
Q ss_pred ccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhcc--CcceeEe
Q 040341 113 DDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK--TCNALLL 158 (251)
Q Consensus 113 ~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~--a~n~ilI 158 (251)
-||+..+++.+.+ ++||+.+= =+++++++.+..+.. .++++++
T Consensus 180 ~~~~~~~~l~~~~--~ipvia~G-GI~~~~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 180 PNLDLLAGVADRT--DAPVIASG-GVSSLDDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp CCHHHHHHHHTTC--SSCEEEES-CCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCHHHHHHHHHhC--CCCEEEEC-CCCCHHHHHHHHhhccCCCCEEEE
Confidence 4899999998877 67777665 578999999988772 3555554
No 380
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=23.23 E-value=57 Score=29.52 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=26.3
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSGET 192 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsgEt 192 (251)
.+.||..+..+.++.|+++|++||+ .|.+.+.
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~ 99 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLH 99 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTTC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCch
Confidence 3579999999999999999999965 5665543
No 381
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=23.22 E-value=3.5e+02 Score=23.08 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=61.1
Q ss_pred cCCCCCcHHHHHHHHHHHHhcCCccceee-eeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCCc
Q 040341 25 APNIQESYEGFELLKTAIAKGGYIGKIVI-GMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPI 103 (251)
Q Consensus 25 ap~~~~~eeal~~i~~Ai~~aGy~~kI~i-glD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~ypI 103 (251)
.-.++-+.+|++.+.+-++..|.+.+|.+ ..|+ .+|... ++|+.=+++ -..++.++++...++++.=++
T Consensus 151 V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~--~~~~~~--~~~D~Vi~~------~p~~~~~~l~~a~~~lk~gG~ 220 (278)
T 3k6r_A 151 VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN--RDFPGE--NIADRILMG------YVVRTHEFIPKALSIAKDGAI 220 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT--TTCCCC--SCEEEEEEC------CCSSGGGGHHHHHHHEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH--HHhccc--cCCCEEEEC------CCCcHHHHHHHHHHHcCCCCE
Confidence 34567789999999999999999876554 3453 455444 677643333 224566777777777665444
Q ss_pred eee-----cCCCCcccHHHHHHHHhhhCCceEEE
Q 040341 104 VSI-----EDPFDQDDWEHHAELTGKIGRHVQIV 132 (251)
Q Consensus 104 ~~I-----EDP~~e~D~~~~~~l~~~lg~~~~iv 132 (251)
+-+ |+-+.++-.+.+.++.+..|-++.++
T Consensus 221 ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 221 IHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp EEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeeecccccchhHHHHHHHHHHHcCCcEEEE
Confidence 321 33344455667777777766555443
No 382
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=23.18 E-value=1.1e+02 Score=26.68 Aligned_cols=117 Identities=14% Similarity=0.143 Sum_probs=70.7
Q ss_pred hHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-ccccc
Q 040341 89 GLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGS 165 (251)
Q Consensus 89 elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGt 165 (251)
+.+..... ++..=.-+.+.+|-+..-+..|..+.+..|-++..+ | ..+++.++++++.+ ...+.+- | |-.|.
T Consensus 85 ~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~---~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 159 (389)
T 3acz_A 85 GAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI-D---TSDVEKVKAAWKPN-TKMVYLESPANPTCK 159 (389)
T ss_dssp HHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE-C---TTCHHHHHHTCCTT-EEEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C---CCCHHHHHHhcCCC-CeEEEEECCCCCCCe
Confidence 54444443 222223566677777666677777667776555443 2 24788888888653 3455553 3 44677
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCCCCC----CchhHhhhhhhcccCccc
Q 040341 166 VTESIEAVKMSKRAGWGVMASHRSGET----EDTFIADLSVGLATGQIK 210 (251)
Q Consensus 166 lte~l~~~~~a~~~g~~~ivs~rsgEt----~d~~iadLAva~~~~~ik 210 (251)
+...-++.++|+++|+.+++-.-.... .-..-+|+.+.+....+-
T Consensus 160 ~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~ 208 (389)
T 3acz_A 160 VSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYIN 208 (389)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTT
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhcc
Confidence 888888899999999988886543221 112235666666555443
No 383
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=23.07 E-value=1e+02 Score=26.99 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=63.5
Q ss_pred ceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee-c-cccccHHHHHHHHHHHHHcC
Q 040341 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-V-NQIGSVTESIEAVKMSKRAG 180 (251)
Q Consensus 103 I~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~-nqiGtlte~l~~~~~a~~~g 180 (251)
-+.+.+|-+..-+..|..+.+..|-++..+ | +.+++.+++++..+ ...+.+- | |-.|.+.+.-++.++|+++|
T Consensus 106 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~---~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 180 (398)
T 1gc0_A 106 EVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-D---MADLQALEAAMTPA-TRVIYFESPANPNMHMADIAGVAKIARKHG 180 (398)
T ss_dssp EEEEESSCCSHHHHHHHHTGGGGTCEEEEE-C---TTCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHGGGT
T ss_pred EEEEeCCCchhHHHHHHHHHHHcCCEEEEE-C---CCCHHHHHHhcCCC-CeEEEEECCCCCCcccccHHHHHHHHHHcC
Confidence 566777877666677766656665444333 2 23789999888653 3445543 3 34678888888899999999
Q ss_pred CcEEEecCCCCC----CchhHhhhhhhcccCccc
Q 040341 181 WGVMASHRSGET----EDTFIADLSVGLATGQIK 210 (251)
Q Consensus 181 ~~~ivs~rsgEt----~d~~iadLAva~~~~~ik 210 (251)
+.+++-.-.... ....-+|+.+.+....+-
T Consensus 181 ~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~ 214 (398)
T 1gc0_A 181 ATVVVDNTYCTPYLQRPLELGADLVVHSATKYLS 214 (398)
T ss_dssp CEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTT
T ss_pred CEEEEECCCcccccCCchhhCceEEEECCccccC
Confidence 988876543210 111224555555555444
No 384
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=22.83 E-value=2.7e+02 Score=21.56 Aligned_cols=111 Identities=15% Similarity=0.097 Sum_probs=67.2
Q ss_pred CcccHH--HHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcC---CcEEE
Q 040341 111 DQDDWE--HHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG---WGVMA 185 (251)
Q Consensus 111 ~e~D~~--~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g---~~~iv 185 (251)
+..|+- -.+.+-+.-|-.+...|-+ ..++.+..++.....+.|.|......++....++++..++.| +.+||
T Consensus 29 d~HdiG~~~va~~l~~~G~eVi~lG~~---~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 29 DGHDRGAKVVARALRDAGFEVVYTGLR---QTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEECCCSB---CCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CccHHHHHHHHHHHHHCCCEEEECCCC---CCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 444542 2333344445555444433 367888888888888999998777788888999999888876 67899
Q ss_pred ecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHhhHHHH
Q 040341 186 SHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLR 228 (251)
Q Consensus 186 s~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKyN~llr 228 (251)
|..-. +++ .+.+-..++..+...+-.-.+-+....++++
T Consensus 106 GG~~~-~~~---~~~l~~~G~d~v~~~~~~~~~~~~~~~~~~~ 144 (161)
T 2yxb_A 106 GGTIP-IPD---LEPLRSLGIREIFLPGTSLGEIIEKVRKLAE 144 (161)
T ss_dssp EECCC-HHH---HHHHHHTTCCEEECTTCCHHHHHHHHHHHHH
T ss_pred eCCCc-hhc---HHHHHHCCCcEEECCCCCHHHHHHHHHHHHH
Confidence 98632 211 1223345665444322222345555555554
No 385
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=22.83 E-value=59 Score=30.39 Aligned_cols=33 Identities=21% Similarity=0.159 Sum_probs=28.0
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCCCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSGETE 193 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsgEt~ 193 (251)
.+.||..+..+.++.|+++|++||+ .|.+.+..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~~ 123 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYP 123 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeecCcCCCCC
Confidence 5789999999999999999999955 57766654
No 386
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=22.82 E-value=57 Score=28.19 Aligned_cols=52 Identities=8% Similarity=0.060 Sum_probs=38.5
Q ss_pred cccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 137 LVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 137 ~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
+.-+++.+++++......++++-++..|...+.-++.++|+++|+.+++-.-
T Consensus 148 ~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea 199 (405)
T 2vi8_A 148 HVIDYDDVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMA 199 (405)
T ss_dssp CSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECT
T ss_pred CCcCHHHHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEcc
Confidence 4568999999887533567777666667655677888899999998877543
No 387
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=22.82 E-value=88 Score=27.51 Aligned_cols=74 Identities=18% Similarity=0.073 Sum_probs=38.4
Q ss_pred CHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc-CC--cEEEecCCCCCCch--------hHhhhhhhcccCc
Q 040341 140 NPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA-GW--GVMASHRSGETEDT--------FIADLSVGLATGQ 208 (251)
Q Consensus 140 n~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~-g~--~~ivs~rsgEt~d~--------~iadLAva~~~~~ 208 (251)
|++.+..|.+-|+-..=|-----+|++|.....++.+++. .+ .+||-.|.|.-.-+ .-.+++..+++.-
T Consensus 48 s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdG 127 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADG 127 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Confidence 4556666655554333222222457777666666666542 23 33556665542222 2345556666666
Q ss_pred cccCC
Q 040341 209 IKTGA 213 (251)
Q Consensus 209 ik~G~ 213 (251)
+-+|.
T Consensus 128 vVfG~ 132 (287)
T 3iwp_A 128 LVFGA 132 (287)
T ss_dssp EEECC
T ss_pred EEEee
Confidence 66665
No 388
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=22.67 E-value=2.3e+02 Score=25.69 Aligned_cols=41 Identities=5% Similarity=-0.042 Sum_probs=28.4
Q ss_pred cHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 114 DWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 114 D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
+|+.-+.+.+.+ +++|++--- + +++.++++++.+.|+.|.+
T Consensus 307 ~~~~~~~vk~~~--~iPvi~~G~-i-~~~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 307 EARLMRTLRNAY--QGTFICSGG-Y-TRELGIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHHHHHHC--SSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred hHHHHHHHHHHC--CCCEEEeCC-C-CHHHHHHHHHCCCCceeee
Confidence 344445667777 455554442 4 7999999999998988765
No 389
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=22.66 E-value=2.9e+02 Score=22.84 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=57.0
Q ss_pred ChhhHHHHHHHhhhcC-CceeecCCCCcccHHHHHH--HHhhhCCceEEEc-ccccccCHHHHHHHHhccC------cce
Q 040341 86 SGDGLKNVYRSFISDH-PIVSIEDPFDQDDWEHHAE--LTGKIGRHVQIVG-DDLLVTNPKRVEKAIKEKT------CNA 155 (251)
Q Consensus 86 s~~elid~~~~l~~~y-pI~~IEDP~~e~D~~~~~~--l~~~lg~~~~ivg-Ddl~vtn~~~i~~~i~~~a------~n~ 155 (251)
+..+.+......+-+- .-+.+.+|-+. ++.. ..+..|.++..+- |+ ..-+++.+++.++... ..+
T Consensus 74 g~t~a~~~~~~~~~~~gd~vl~~~~~~~----~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~l~~~~~~~~~~~~~ 148 (359)
T 1svv_A 74 GGTQTNLIACSLALRPWEAVIATQLGHI----STHETGAIEATGHKVVTAPCPD-GKLRVADIESALHENRSEHMVIPKL 148 (359)
T ss_dssp CHHHHHHHHHHHHCCTTEEEEEETTSHH----HHSSTTHHHHTTCCEEEECCTT-SCCCHHHHHHHHHHSCSTTSCEEEE
T ss_pred CchHHHHHHHHHHhCCCCEEEEcccchH----HHHHHHHHhcCCCeeEEEeCCC-CeecHHHHHHHHHHHHhccCCCceE
Confidence 3556666555544332 26777777543 3322 1234454443332 33 4457899999887641 445
Q ss_pred eEee-ccccccH---HHHHHHHHHHHHcCCcEEEecC
Q 040341 156 LLLK-VNQIGSV---TESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 156 ilIK-~nqiGtl---te~l~~~~~a~~~g~~~ivs~r 188 (251)
+++- ||-.|.+ .+.-+++++|+++|+.+++-.-
T Consensus 149 v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~ 185 (359)
T 1svv_A 149 VYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGA 185 (359)
T ss_dssp EEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred EEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 5443 4434554 3466788899999998887654
No 390
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=22.66 E-value=3.7e+02 Score=23.17 Aligned_cols=48 Identities=8% Similarity=0.090 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCCCchhHHHHh
Q 040341 165 SVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKY 223 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~aKy 223 (251)
++.|...+++. ..++||. |+-.+|||.+++...+-.=++....++.=|
T Consensus 251 sl~e~~ali~~-----a~~~i~~------DsG~~HlAaa~g~P~v~lfg~t~p~~~~P~ 298 (349)
T 3tov_A 251 QLGPLAAAMNR-----CNLLITN------DSGPMHVGISQGVPIVALYGPSNPFFYGPY 298 (349)
T ss_dssp CHHHHHHHHHT-----CSEEEEE------SSHHHHHHHTTTCCEEEECSSCCHHHHSCT
T ss_pred CHHHHHHHHHh-----CCEEEEC------CCCHHHHHHhcCCCEEEEECCCCccccCCC
Confidence 56666655553 3477876 466789999999988776556555555333
No 391
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=22.62 E-value=4.2e+02 Score=23.81 Aligned_cols=75 Identities=16% Similarity=0.141 Sum_probs=52.2
Q ss_pred cccCHHHHHHHHhc-cCcceeEeec------cccccHHHHHHHHHHHHH--cCCcEEEecCCCCC-----CchhHhhhhh
Q 040341 137 LVTNPKRVEKAIKE-KTCNALLLKV------NQIGSVTESIEAVKMSKR--AGWGVMASHRSGET-----EDTFIADLSV 202 (251)
Q Consensus 137 ~vtn~~~i~~~i~~-~a~n~ilIK~------nqiGtlte~l~~~~~a~~--~g~~~ivs~rsgEt-----~d~~iadLAv 202 (251)
...+++.+++++.. .....|.+-. |-.|++.+.-+++++|++ +|..++|-.--++- ....-+|+.+
T Consensus 160 ~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~ 239 (427)
T 3hvy_A 160 GKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIA 239 (427)
T ss_dssp TBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEE
T ss_pred CCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEE
Confidence 44678888888873 3455566554 557899999999999999 89999887543332 1122368888
Q ss_pred hcccCcccc
Q 040341 203 GLATGQIKT 211 (251)
Q Consensus 203 a~~~~~ik~ 211 (251)
++....+-.
T Consensus 240 ~S~sK~lgg 248 (427)
T 3hvy_A 240 GSLIKNIGG 248 (427)
T ss_dssp EETTSGGGT
T ss_pred ECCcccccc
Confidence 887776543
No 392
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=22.61 E-value=2.2e+02 Score=25.48 Aligned_cols=67 Identities=9% Similarity=0.044 Sum_probs=38.5
Q ss_pred hhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 87 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
.++.+.+.+. +++.++-+|+=.-....-+.-+.+.+.+ +++|++--- + +++.+++.++.+.|+.|.+
T Consensus 249 ~~~~~~la~~-l~~~Gvd~i~v~~~~~~~~~~~~ik~~~--~iPvi~~Gg-i-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 249 AATFGHVARE-LGRRRIAFLFARESFGGDAIGQQLKAAF--GGPFIVNEN-F-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHH-HHHTTCSEEEEECCCSTTCCHHHHHHHH--CSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHH-HHHcCCCEEEECCCCCCHHHHHHHHHHc--CCCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 4455555554 5777766654211110001234566666 344544432 4 8999999999988887665
No 393
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=22.36 E-value=1.8e+02 Score=24.46 Aligned_cols=100 Identities=8% Similarity=0.076 Sum_probs=58.8
Q ss_pred hhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEeec--ccc
Q 040341 87 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKV--NQI 163 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~--nqi 163 (251)
..+.+..+..++..=.-+.+.+|-... ..|..+.+..|-++..+ -|+-..-+++.+++++.......+++-. |-.
T Consensus 63 ~t~al~~~~~~~~~gd~vi~~~~~~~~--~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 140 (384)
T 3zrp_A 63 GTSAMESVTSLLKPNDKILVVSNGVFG--DRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETST 140 (384)
T ss_dssp HHHHHHHGGGGCCTTCEEEEECSSHHH--HHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTT
T ss_pred cHHHHHHHHhhcCCCCEEEEecCCcch--HHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 345444334433332334444442111 24767766666554443 2332334789999998874455665553 446
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
|++...-++.++|+++|+.+++-.-
T Consensus 141 G~~~~l~~i~~l~~~~~~~li~D~a 165 (384)
T 3zrp_A 141 GVREPVKDVINKIRKYVELIVVDGV 165 (384)
T ss_dssp TEECCHHHHHHHHGGGEEEEEEECT
T ss_pred ceECcHHHHHHHHHhcCCEEEEECc
Confidence 7777777888999999998888653
No 394
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=22.18 E-value=50 Score=26.68 Aligned_cols=50 Identities=18% Similarity=0.285 Sum_probs=34.1
Q ss_pred ceeEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhh
Q 040341 154 NALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVG 203 (251)
Q Consensus 154 n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva 203 (251)
+-++|=.++-|.-.+++++++.|++.|..++.=....++.-...+|..+-
T Consensus 132 ~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 132 GDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 34555677778889999999999999998854443344444444555444
No 395
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=22.04 E-value=1.5e+02 Score=25.47 Aligned_cols=98 Identities=12% Similarity=0.028 Sum_probs=58.7
Q ss_pred hHHHHH-HHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEeec--cccc
Q 040341 89 GLKNVY-RSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKV--NQIG 164 (251)
Q Consensus 89 elid~~-~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~--nqiG 164 (251)
+.+... ..++..=.-+.+.+|-.... .|..+.+..|-++..| .|+-..-+++.+++++.......+++-. |-.|
T Consensus 73 ~al~~~~~~l~~~gd~Vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 150 (416)
T 3isl_A 73 AGIEAVLASVIEPEDDVLIPIYGRFGY--LLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTG 150 (416)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHhcCCCCEEEEecCCcccH--HHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCc
Confidence 434433 33333333555555532111 2776777776554443 2332344899999998754445655542 4467
Q ss_pred cHHHHHHHHHHHHHcCCcEEEecC
Q 040341 165 SVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~ivs~r 188 (251)
.+...-++.++|+++|+.+++-.-
T Consensus 151 ~~~~l~~i~~l~~~~~~~li~D~a 174 (416)
T 3isl_A 151 RIHPLKAIGEACRTEDALFIVDAV 174 (416)
T ss_dssp EECCCHHHHHHHHHTTCEEEEECT
T ss_pred eecCHHHHHHHHHHcCCEEEEECC
Confidence 777777888999999998888643
No 396
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=22.04 E-value=2.2e+02 Score=25.40 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=38.6
Q ss_pred hhhHHHHHHHhhhcCCceeecC--CCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEe
Q 040341 87 GDGLKNVYRSFISDHPIVSIED--PFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 158 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IED--P~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilI 158 (251)
.++.+.+.+. +++.++-+|+= +-...+ .-+.+.+.+ +++|++--- + +++.+++.++.+.|+.|.+
T Consensus 241 ~~~~~~la~~-l~~~Gvd~i~v~~~~~~~~--~~~~ik~~~--~iPvi~~Gg-i-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 241 AETFTYVARE-LGKRGIAFICSREREADDS--IGPLIKEAF--GGPYIVNER-F-DKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHHH-HHHTTCSEEEEECCCCTTC--CHHHHHHHH--CSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHH-HHHhCCCEEEECCCCCCHH--HHHHHHHHC--CCCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 4455555554 57778666642 211112 234566667 344544432 4 8999999999998887765
No 397
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=21.92 E-value=2.4e+02 Score=24.06 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHhc--CCcc-ceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhh--hcCCceee
Q 040341 32 YEGFELLKTAIAKG--GYIG-KIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI--SDHPIVSI 106 (251)
Q Consensus 32 eeal~~i~~Ai~~a--Gy~~-kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~--~~ypI~~I 106 (251)
++.++.+.++++.. +|.. .....+--+..+++.. .+.+-+. |..+.+......+ ..=.-|.+
T Consensus 17 ~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~---~~~i~~~----------sGt~al~~~l~~l~~~~gd~Vi~ 83 (388)
T 1b9h_A 17 DAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGA---AHALAVT----------NGTHALELALQVMGVGPGTEVIV 83 (388)
T ss_dssp HHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTC---SEEEEES----------CHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCC---CeEEEeC----------CHHHHHHHHHHHcCCCCcCEEEE
Confidence 78888899988652 2221 1111111122334432 2433221 2235455444433 22235677
Q ss_pred cCCCCcccHHHHHHHHhhhCCceEEEc-cc-ccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEE
Q 040341 107 EDPFDQDDWEHHAELTGKIGRHVQIVG-DD-LLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVM 184 (251)
Q Consensus 107 EDP~~e~D~~~~~~l~~~lg~~~~ivg-Dd-l~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~i 184 (251)
.+|-+..-.. ..+..|-++..+- |+ -+.-+++.+++++..+ .. +++=.|..|++...-++.++|+++|+.++
T Consensus 84 ~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~-~~-~v~~~n~tG~~~~l~~i~~la~~~~~~li 157 (388)
T 1b9h_A 84 PAFTFISSSQ----AAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPR-TK-VIMPVHMAGLMADMDALAKISADTGVPLL 157 (388)
T ss_dssp ESSSCTHHHH----HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT-EE-EECCBCGGGCCCCHHHHHHHHHHHTCCBC
T ss_pred CCCccHHHHH----HHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC-ce-EEEEeCCccCcCCHHHHHHHHHHcCCEEE
Confidence 8886654333 3345554444432 22 1345899999888642 33 33323557888788888999999999888
Q ss_pred EecCCC
Q 040341 185 ASHRSG 190 (251)
Q Consensus 185 vs~rsg 190 (251)
+-.-.+
T Consensus 158 ~D~a~~ 163 (388)
T 1b9h_A 158 QDAAHA 163 (388)
T ss_dssp EECTTC
T ss_pred Eecchh
Confidence 765443
No 398
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=21.89 E-value=3.6e+02 Score=22.75 Aligned_cols=143 Identities=16% Similarity=0.097 Sum_probs=76.0
Q ss_pred CcHHHHHHHHHHHHhcCCccceeeeeehhhh--------ccccc---CCcceeecCCCCCCCCCCccChhhHHHHHHHhh
Q 040341 30 ESYEGFELLKTAIAKGGYIGKIVIGMDVAAS--------EFYDS---KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 98 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~kI~iglD~Aas--------e~~~~---~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~ 98 (251)
+.+++.+.|..|+ ++||+- +|.|.. ++... .+..+.+..|.. ....+++.+...+.+-+
T Consensus 48 ~~~~~~~~v~~Al-~~Gi~~-----~DTA~~Yg~E~~lG~al~~~~~~R~~~~i~TK~~----~~~~~~~~i~~~~e~SL 117 (283)
T 3o0k_A 48 SNDEAVSAVSEAL-KAGYRH-----IDTATIYGNEEGVGKAINGSGIARADIFLTTKLW----NSDQGYESTLKAFDTSL 117 (283)
T ss_dssp CHHHHHHHHHHHH-HHTCCE-----EECCGGGSCHHHHHHHHHTSSSCGGGCEEEEEEC----GGGCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCE-----EECcccccCHHHHHHHHHHcCCCcccEEEEEccC----CCCCCHHHHHHHHHHHH
Confidence 4589999999999 689872 333310 11110 112344443321 11234555444444333
Q ss_pred h----cC-CceeecCCCCcc--cHHHHHHHHhhh-CCceEEEcccccccCHHHHHHHHhccC----cceeEeeccccccH
Q 040341 99 S----DH-PIVSIEDPFDQD--DWEHHAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKT----CNALLLKVNQIGSV 166 (251)
Q Consensus 99 ~----~y-pI~~IEDP~~e~--D~~~~~~l~~~l-g~~~~ivgDdl~vtn~~~i~~~i~~~a----~n~ilIK~nqiGtl 166 (251)
+ +| .+.+|-.|.... ..+.|..|.+-. ..++.-+| ++.-+++.++++++... +|-+-+-| .-.
T Consensus 118 ~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iG--vSn~~~~~l~~~~~~~~~~p~~~Q~~~~~--~~~- 192 (283)
T 3o0k_A 118 KKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIG--VSNFRTADLERLIKESGVTPVLNQIELHP--QFQ- 192 (283)
T ss_dssp HHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEE--EESCCHHHHHHHHHHHSCCCSEEEEECBT--TBC-
T ss_pred HHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEE--eccCcHHHHHHHHHhCCCCeEEEEeecCc--ccC-
Confidence 3 34 377888886541 235566554333 12566666 34457888888765422 12111221 111
Q ss_pred HHHHHHHHHHHHcCCcEEEecCC
Q 040341 167 TESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 167 te~l~~~~~a~~~g~~~ivs~rs 189 (251)
--+.+..|+++|+.++.-+--
T Consensus 193 --~~~l~~~~~~~gi~v~a~spL 213 (283)
T 3o0k_A 193 --QDELRLFHGKHDIATEAWSPL 213 (283)
T ss_dssp --CHHHHHHHHHTTCEEEEESTT
T ss_pred --cHHHHHHHHHCCcEEEEecCC
Confidence 136888999999999876643
No 399
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=21.87 E-value=2.2e+02 Score=27.84 Aligned_cols=118 Identities=14% Similarity=0.151 Sum_probs=67.1
Q ss_pred CCccChhhHHHHHHHhhhcCCceeecCCCC---cccHHHHHHHHhhh--CCceEEEccccccc-CHHHHHHHHhc--cCc
Q 040341 82 SQKVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHHAELTGKI--GRHVQIVGDDLLVT-NPKRVEKAIKE--KTC 153 (251)
Q Consensus 82 ~~~~s~~elid~~~~l~~~ypI~~IEDP~~---e~D~~~~~~l~~~l--g~~~~ivgDdl~vt-n~~~i~~~i~~--~a~ 153 (251)
+..+|.+|-+++... +++.++-.||=.|. +.|++....+.+.. .+.+.|++ ++. ...+++++++. ++.
T Consensus 87 g~~~s~eeKl~Ia~~-L~~lGVd~IEaGfP~asp~D~e~v~~i~~~~l~~~~~~i~a---L~r~~~~did~a~eal~~a~ 162 (644)
T 3hq1_A 87 IDPMSPARKRRMFDL-LVRMGYKEIEVGFPSASQTDFDFVREIIEQGAIPDDVTIQV---LTQCRPELIERTFQACSGAP 162 (644)
T ss_dssp SSCCCHHHHHHHHHH-HHHHTCSEEEEECTTTCHHHHHHHHHHHHTTCSCTTCEEEE---EEESCHHHHHHHHHHHTTCS
T ss_pred CCCCCHHHHHHHHHH-HHHcCCCEEEEeCCCCChhHHHHHHHHHhcCCCCCCeEEEE---EecCCHhhHHHHHHHHhcCC
Confidence 347899999998877 58889999998874 67888887776652 12333432 233 45567777652 222
Q ss_pred c-eeEe--ec-------cccccHHHHHH----HHHHHHHcC-------CcEEEec-CCCCCCchhHhhhhhh
Q 040341 154 N-ALLL--KV-------NQIGSVTESIE----AVKMSKRAG-------WGVMASH-RSGETEDTFIADLSVG 203 (251)
Q Consensus 154 n-~ilI--K~-------nqiGtlte~l~----~~~~a~~~g-------~~~ivs~-rsgEt~d~~iadLAva 203 (251)
. .|.| +. +-=-|..|.++ ++++|++++ |.+..|. ....|+-.|+..++=+
T Consensus 163 ~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~a 234 (644)
T 3hq1_A 163 RAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDA 234 (644)
T ss_dssp EEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHH
T ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHH
Confidence 2 1222 11 11135555555 344444443 4455554 2234677777666543
No 400
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=21.83 E-value=4.1e+02 Score=25.07 Aligned_cols=76 Identities=12% Similarity=0.260 Sum_probs=47.8
Q ss_pred ceEEEccccccc----CHHHHHHHHhccCcceeEeecccc--cc-HHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhh
Q 040341 128 HVQIVGDDLLVT----NPKRVEKAIKEKTCNALLLKVNQI--GS-VTESIEAVKMSKRAGWGVMASHRSGETEDTFIADL 200 (251)
Q Consensus 128 ~~~ivgDdl~vt----n~~~i~~~i~~~a~n~ilIK~nqi--Gt-lte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadL 200 (251)
+..+|-|...+. -.+.++++++.+ ...|-|+.-.. .. +..+.++.++|+++|..+||-.+ .|+
T Consensus 11 ~lYlITd~~~~~~~~~l~~~ve~al~~G-v~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~---------~dl 80 (540)
T 3nl6_A 11 SLYLVTDSGMIPEGKTLYGQVEAGLQNG-VTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDR---------IDV 80 (540)
T ss_dssp SEEEEC-CTTCCTTCCHHHHHHHHHHTT-CSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSC---------SHH
T ss_pred CEEEEECchhccCcchHHHHHHHHHHCC-CCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCc---------HHH
Confidence 455565553221 135666666655 55666643221 11 34455667789999999999877 789
Q ss_pred hhhcccCccccCC
Q 040341 201 SVGLATGQIKTGA 213 (251)
Q Consensus 201 Ava~~~~~ik~G~ 213 (251)
|..+++.-+-.|.
T Consensus 81 A~~~gAdGVHLgq 93 (540)
T 3nl6_A 81 AMAIGADGIHVGQ 93 (540)
T ss_dssp HHHTTCSEEEECT
T ss_pred HHHcCCCEEEECh
Confidence 9988887666665
No 401
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=21.83 E-value=75 Score=26.14 Aligned_cols=52 Identities=17% Similarity=0.159 Sum_probs=35.6
Q ss_pred eEeeccccccHHHHHHHHHHHHHcCCcEEEecCCCCC-----------CchhHhhhhhhcccC
Q 040341 156 LLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGET-----------EDTFIADLSVGLATG 207 (251)
Q Consensus 156 ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~rsgEt-----------~d~~iadLAva~~~~ 207 (251)
++|=.++-|.-.+++++++.|++.|..++.=.....+ .-.-++|+.+-..++
T Consensus 111 v~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~~~~~ 173 (243)
T 3cvj_A 111 VIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAP 173 (243)
T ss_dssp EEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEECCCC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEECCCC
Confidence 4555788888899999999999999988543322222 345567776654443
No 402
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.74 E-value=2.7e+02 Score=21.45 Aligned_cols=81 Identities=12% Similarity=0.181 Sum_probs=42.9
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.--+...| ++-...+.+. ...++|+ ... .+++.+.++++.| ++.++.||-.
T Consensus 34 ~~~~a~~~~~~--~~~dlvllD~~l~~~~g~~~~~~lr~~-~~~~~ii~ls~~---~~~~~~~~~~~~g-a~~~l~Kp~~ 106 (225)
T 1kgs_A 34 DGEEGMYMALN--EPFDVVILDIMLPVHDGWEILKSMRES-GVNTPVLMLTAL---SDVEYRVKGLNMG-ADDYLPKPFD 106 (225)
T ss_dssp SHHHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHT-TCCCCEEEEESS---CHHHHHHHTCCCC-CSEEEESSCC
T ss_pred CHHHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEeCC---CCHHHHHHHHhCC-ccEEEeCCCC
Confidence 34555554443 3445666655554333 3444444443 2234443 222 2355666676655 5678999977
Q ss_pred cccHHHHHHHH
Q 040341 163 IGSVTESIEAV 173 (251)
Q Consensus 163 iGtlte~l~~~ 173 (251)
...+.++++.+
T Consensus 107 ~~~l~~~i~~~ 117 (225)
T 1kgs_A 107 LRELIARVRAL 117 (225)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666655544
No 403
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=21.71 E-value=94 Score=25.57 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=42.7
Q ss_pred cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEe
Q 040341 107 EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMAS 186 (251)
Q Consensus 107 EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs 186 (251)
.+||...=+.+..+..++.|-.+.++...-.-...+.++..+..+ .+++++-|...... -..++.+++.|+++++-
T Consensus 13 ~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~-vdgiii~~~~~~~~---~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 13 EEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASG-AKGFVICTPDPKLG---SAIVAKARGYDMKVIAV 88 (306)
T ss_dssp TSHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTT-CCEEEEECSCGGGH---HHHHHHHHHTTCEEEEE
T ss_pred CchHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCchhh---HHHHHHHHHCCCcEEEe
Confidence 344444444555555555554554432210001123455555554 89999987654333 33456788899999766
Q ss_pred cC
Q 040341 187 HR 188 (251)
Q Consensus 187 ~r 188 (251)
.+
T Consensus 89 ~~ 90 (306)
T 8abp_A 89 DD 90 (306)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 404
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=21.61 E-value=3.5e+02 Score=22.49 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=23.8
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEE
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV 132 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv 132 (251)
+++.....+.+|+.+..+..|.-|+..........+.++. ++|+|
T Consensus 56 ~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~--~iP~v 100 (358)
T 3hut_A 56 DADQARTIARAFVDDPRVVGVLGDFSSTVSMAAGSIYGKE--GMPQL 100 (358)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEECSSHHHHHHHHHHHHHH--TCCEE
T ss_pred CHHHHHHHHHHHhccCCcEEEEcCCCcHHHHHHHHHHHHC--CCcEE
Confidence 4455556666666455555555565544444444444444 34444
No 405
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=21.54 E-value=63 Score=29.67 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=22.1
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEE
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~iv 185 (251)
+.||..+..+.++.|+++|++||+
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~Vil 98 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVM 98 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEE
Confidence 579999999999999999999965
No 406
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=21.50 E-value=43 Score=31.62 Aligned_cols=69 Identities=17% Similarity=0.182 Sum_probs=41.9
Q ss_pred HhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE----EEecCCCCCCchhHhhhhhhcccCccccCCCCchhHH
Q 040341 148 IKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV----MASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERL 220 (251)
Q Consensus 148 i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~----ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~ 220 (251)
-.+-+.|++++||+....+| ++.++++++++|++- +|.....++.+..+.|-.| ..-..+|+..-+.++
T Consensus 193 pALaaGNtVVlKPs~~tp~t-~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~v---d~V~FTGS~~vG~~i 265 (520)
T 3ed6_A 193 PALATGCSLVMKPSEITPLT-TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV---DLVSFTGGIETGKHI 265 (520)
T ss_dssp HHHHHTCEEEEECCTTCCHH-HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTC---SEEEEESCHHHHHHH
T ss_pred HHHHcCCEEEEEcCCcchHH-HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCc---CEEEEECCHHHHHHH
Confidence 34568999999999987776 567889999998863 4443222333333332222 134567766544444
No 407
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=21.49 E-value=64 Score=26.64 Aligned_cols=34 Identities=15% Similarity=0.112 Sum_probs=13.9
Q ss_pred eeEeeccccccHHHHHHHHHHHHH-cCCcEEEecC
Q 040341 155 ALLLKVNQIGSVTESIEAVKMSKR-AGWGVMASHR 188 (251)
Q Consensus 155 ~ilIK~nqiGtlte~l~~~~~a~~-~g~~~ivs~r 188 (251)
.+.|-+.-+.+++.--.++++... .+-.-+||.+
T Consensus 56 ~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk 90 (192)
T 3kts_A 56 KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTR 90 (192)
T ss_dssp EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESC
T ss_pred eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCc
Confidence 444444444444433333333222 2444455544
No 408
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=21.41 E-value=91 Score=26.97 Aligned_cols=97 Identities=10% Similarity=0.005 Sum_probs=51.4
Q ss_pred hHHHHHHH-hhhcCCceeecCCCCcccHHHHHHHHhhhCCc---eEEEcccccccCHHHHHHHHhccCcceeEee-cccc
Q 040341 89 GLKNVYRS-FISDHPIVSIEDPFDQDDWEHHAELTGKIGRH---VQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-VNQI 163 (251)
Q Consensus 89 elid~~~~-l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~---~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK-~nqi 163 (251)
+.+..... +++.-.-+.+++|-+..-+..|..+. ..|.. +++--|+-..-+++.+++++......+|++- +| .
T Consensus 98 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~-~ 175 (417)
T 3n0l_A 98 QANQGVYAALINPGDKILGMDLSHGGHLTHGAKVS-SSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASA-Y 175 (417)
T ss_dssp HHHHHHHHHHSCTTCEEEEECC-----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSS-C
T ss_pred HHHHHHHHHhcCCCCEEEecccccccccchhhhhh-hhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCcc-c
Confidence 44444433 33333467788885532222222221 11111 2221233345689999999875445566654 44 5
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEec
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~ 187 (251)
|++...-++.++|+++|+.+++-.
T Consensus 176 G~~~~l~~i~~l~~~~~~~li~De 199 (417)
T 3n0l_A 176 ARVIDFAKFREIADEIGAYLFADI 199 (417)
T ss_dssp CSCCCHHHHHHHHHHHTCEEEEEC
T ss_pred CccCCHHHHHHHHHHcCCEEEEEC
Confidence 888777788899999999888765
No 409
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=21.40 E-value=1.6e+02 Score=21.92 Aligned_cols=31 Identities=10% Similarity=0.254 Sum_probs=21.4
Q ss_pred cCCcce-eecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 65 SKDKTY-DLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 65 ~~~g~Y-~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
..+|+| .+... =...|.+|+.++|.+| .+.|
T Consensus 72 Ss~GkY~Svtv~------v~v~S~eQv~aiY~~L-~~~~ 103 (109)
T 1rwu_A 72 SSKGNYHSVSIT------INATHIEQVETLYEEL-GKID 103 (109)
T ss_dssp SSCSSEEEEEEE------ECCSSHHHHHHHHHHH-SCSS
T ss_pred CCCCeEEEEEEE------EEECCHHHHHHHHHHH-hcCC
Confidence 456999 44321 1356889999999995 7777
No 410
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=21.36 E-value=64 Score=29.39 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=25.8
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSGE 191 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsgE 191 (251)
.+.||..+..+.++.|+++|+.||+ .|.+.+
T Consensus 91 p~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~ 125 (475)
T 2z1k_A 91 PILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRG 125 (475)
T ss_dssp GGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 3579999999999999999999955 566544
No 411
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=21.31 E-value=60 Score=29.75 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=25.4
Q ss_pred cccccHHHHHHHHHHHHHcCCcEEE----ecCCC
Q 040341 161 NQIGSVTESIEAVKMSKRAGWGVMA----SHRSG 190 (251)
Q Consensus 161 nqiGtlte~l~~~~~a~~~g~~~iv----s~rsg 190 (251)
.+.||..+..+.++.|+++|++||+ .|.+.
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 4689999999999999999999965 46554
No 412
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=21.28 E-value=89 Score=28.64 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=61.5
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHH-----Hh-----ccCcce
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKA-----IK-----EKTCNA 155 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~-----i~-----~~a~n~ 155 (251)
+.+|+++..+.+.-.|..+=+||==.++=++--.+++.++ ++++.-||. ...--+.-| .+ ....+.
T Consensus 120 ~~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r~r~~~--~Ipvf~DDi--qGTasV~lAal~~A~~i~g~~l~~~kV 195 (388)
T 1vl6_A 120 EEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEEM--NIPVFHDDQ--QGTAVVVSAAFLNALKLTEKKIEEVKV 195 (388)
T ss_dssp CHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHHC--SSCEEEHHH--HHHHHHHHHHHHHHHHHHTCCTTTCEE
T ss_pred CHHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHHhhhhc--Ccceecccc--ccHHHHHHHHHHHHHHHhCCCCCCcEE
Confidence 5889989888877777777888843556677777888776 688888883 222222211 11 112222
Q ss_pred eEeeccccccHHHHHHHHHHHHHcCC-cEEEecCC
Q 040341 156 LLLKVNQIGSVTESIEAVKMSKRAGW-GVMASHRS 189 (251)
Q Consensus 156 ilIK~nqiGtlte~l~~~~~a~~~g~-~~ivs~rs 189 (251)
++ +|.=+-...+++++...|. .+||-.|+
T Consensus 196 Vv-----~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 196 VV-----NGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp EE-----ECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred EE-----ECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 22 3555556678888888898 68887776
No 413
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=21.27 E-value=2.2e+02 Score=19.95 Aligned_cols=79 Identities=20% Similarity=0.259 Sum_probs=43.8
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCccc-HHHHHHHHhhhCCceEEE--cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHHAELTGKIGRHVQIV--GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D-~~~~~~l~~~lg~~~~iv--gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+..+.++.+.+ ..+.++.+.--+...| ++-...+.+.. ..++|+ ... .+.+.+.++.+.+ ++.++.||-.
T Consensus 37 ~~~~al~~~~~--~~~dlvilD~~lp~~~g~~~~~~l~~~~-~~~~ii~ls~~---~~~~~~~~~~~~g-a~~~l~Kp~~ 109 (133)
T 3b2n_A 37 NGLDAMKLIEE--YNPNVVILDIEMPGMTGLEVLAEIRKKH-LNIKVIIVTTF---KRPGYFEKAVVND-VDAYVLKERS 109 (133)
T ss_dssp CHHHHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHTT-CSCEEEEEESC---CCHHHHHHHHHTT-CSEEEETTSC
T ss_pred CHHHHHHHHhh--cCCCEEEEecCCCCCCHHHHHHHHHHHC-CCCcEEEEecC---CCHHHHHHHHHcC-CcEEEECCCC
Confidence 45566665544 3555776655444333 34444555432 234443 222 3566777787765 5778999976
Q ss_pred cccHHHHHH
Q 040341 163 IGSVTESIE 171 (251)
Q Consensus 163 iGtlte~l~ 171 (251)
...+.++++
T Consensus 110 ~~~L~~~i~ 118 (133)
T 3b2n_A 110 IEELVETIN 118 (133)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544444
No 414
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=21.17 E-value=57 Score=30.92 Aligned_cols=70 Identities=20% Similarity=0.142 Sum_probs=42.5
Q ss_pred HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcE----EEecCCCCCCchhHhhhhhhcccCccccCCCCchhHH
Q 040341 147 AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGV----MASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERL 220 (251)
Q Consensus 147 ~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~----ivs~rsgEt~d~~iadLAva~~~~~ik~G~~~r~Er~ 220 (251)
+..+-+.|++++||+....+| +..+++++.++|++- +|.....++.+..+.|-.|. .-..+|+..-+.++
T Consensus 194 a~ALaaGN~VVlKps~~tp~t-a~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~---~I~FTGS~~~G~~i 267 (538)
T 3qan_A 194 VAPIVTGNTVVLKPASTTPVV-AAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTS---LITFTGSKDVGVRL 267 (538)
T ss_dssp HHHHHTTCEEEEECCTTSHHH-HHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEE---EEEEESCHHHHHHH
T ss_pred HHHHHcCCEEEEECCCccHHH-HHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcC---EEEEECCHHHHHHH
Confidence 344568999999999975554 677888999988762 44433234444444332221 24466766555444
No 415
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=21.14 E-value=91 Score=27.89 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=15.4
Q ss_pred CcHHHHHHHHHHHHhcCCccceeeeeeh
Q 040341 30 ESYEGFELLKTAIAKGGYIGKIVIGMDV 57 (251)
Q Consensus 30 ~~eeal~~i~~Ai~~aGy~~kI~iglD~ 57 (251)
+.+...+++..+ +++||+- |.+.+|+
T Consensus 134 d~~~~~~~~~~a-~~~G~~a-i~it~d~ 159 (370)
T 1gox_A 134 DRNVVAQLVRRA-ERAGFKA-IALTVDT 159 (370)
T ss_dssp SHHHHHHHHHHH-HHTTCCE-EEEECSC
T ss_pred CchHHHHHHHHH-HHCCCCE-EEEeCCC
Confidence 445566666664 6889862 4444554
No 416
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=21.07 E-value=1.4e+02 Score=26.93 Aligned_cols=83 Identities=7% Similarity=0.033 Sum_probs=56.5
Q ss_pred eeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcc-----eeEee-c-cccccHHHHHHHHHH
Q 040341 104 VSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCN-----ALLLK-V-NQIGSVTESIEAVKM 175 (251)
Q Consensus 104 ~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n-----~ilIK-~-nqiGtlte~l~~~~~ 175 (251)
+++-+|-+ ..|.+..+.+|-++..| -|+-+..+++.+++++...... .+++- + |-.|++.+.-+++++
T Consensus 185 v~~s~~~h----~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~l 260 (486)
T 1js3_A 185 AYASDQAH----SSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPI 260 (486)
T ss_dssp EEEETTCC----HHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred EEECCCCc----HHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHH
Confidence 44555544 56777777776554444 2444567899999999764421 33333 3 567889899999999
Q ss_pred HHHcCCcEEEecCCC
Q 040341 176 SKRAGWGVMASHRSG 190 (251)
Q Consensus 176 a~~~g~~~ivs~rsg 190 (251)
|+++|+.++|-.-.+
T Consensus 261 a~~~~~~lhvD~a~g 275 (486)
T 1js3_A 261 CHEEDIWLHVDAAYA 275 (486)
T ss_dssp HHHTTCEEEEECTTG
T ss_pred HHHcCCEEEEehhhH
Confidence 999999888865443
No 417
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=20.90 E-value=2.5e+02 Score=23.12 Aligned_cols=100 Identities=14% Similarity=0.041 Sum_probs=55.8
Q ss_pred hhhHHHHHHHhhhcCCceeecCCCCcccHHHHHHHHhhhCCceEEE-cccccccCHHHHHHHHhccCcceeEeec--ccc
Q 040341 87 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKV--NQI 163 (251)
Q Consensus 87 ~~elid~~~~l~~~ypI~~IEDP~~e~D~~~~~~l~~~lg~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~--nqi 163 (251)
..+.+......+-+ .-+.+.+|-+.. . .|..+.+..|-++..+ -|+-...+++.+++.++......+++-. |-.
T Consensus 61 ~t~a~~~~~~~~~~-d~vl~~~~~~~~-~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 137 (353)
T 2yrr_A 61 GSLGMEAGLANLDR-GPVLVLVNGAFS-Q-RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETST 137 (353)
T ss_dssp HHHHHHHHHHTCSC-CCEEEEECSHHH-H-HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred cHHHHHHHHHHhcC-CcEEEEcCCCch-H-HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCc
Confidence 44555544433322 433343432211 1 3555555666554333 2332345789999888763344555542 235
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 164 GSVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 164 Gtlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
|.+...-++.++|+++|+.+++-.-.
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~ 163 (353)
T 2yrr_A 138 GVLNPAEAIGALAKEAGALFFLDAVT 163 (353)
T ss_dssp TEECCHHHHHHHHHHHTCEEEEECTT
T ss_pred ceecCHHHHHHHHHHcCCeEEEEcCc
Confidence 66666668889999999988876543
No 418
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=20.88 E-value=2.1e+02 Score=23.37 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=31.0
Q ss_pred HHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEecC
Q 040341 115 WEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHR 188 (251)
Q Consensus 115 ~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs~r 188 (251)
+.+..+..++.|-.+.++..+- ......+.+.+..+.+++++|-+..... +.++.+++.|+++++=.+
T Consensus 29 ~~gi~~~a~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~~~~~-----~~~~~l~~~~iPvV~~~~ 96 (294)
T 3qk7_A 29 ISWIGIELGKRGLDLLLIPDEP-GEKYQSLIHLVETRRVDALIVAHTQPED-----FRLQYLQKQNFPFLALGR 96 (294)
T ss_dssp HHHHHHHHHHTTCEEEEEEECT-TCCCHHHHHHHHHTCCSEEEECSCCSSC-----HHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCCCCCh-----HHHHHHHhCCCCEEEECC
Confidence 3333333344444444442221 2222333334444456666665544322 344556666777655444
No 419
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=20.78 E-value=3e+02 Score=24.22 Aligned_cols=117 Identities=12% Similarity=0.210 Sum_probs=59.4
Q ss_pred ccChhhHHHHHHHhhhcCCceeecC-CCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHH----hcc-CcceeE
Q 040341 84 KVSGDGLKNVYRSFISDHPIVSIED-PFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAI----KEK-TCNALL 157 (251)
Q Consensus 84 ~~s~~elid~~~~l~~~ypI~~IED-P~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i----~~~-a~n~il 157 (251)
..+.++++..+.......++--|.. -+.++||.........+. ..++.-||..-.++..|..-+ ... ....|+
T Consensus 83 Ems~~ql~~Rlls~~~~v~~~~l~~g~Ls~~e~~~l~~a~~~l~-~~~l~I~d~~~~si~~i~~~ir~l~~~~gg~~lIV 161 (338)
T 4a1f_A 83 EMSAEQLALRALSDLTSINMHDLESGRLDDDQWENLAKCFDHLS-QKKLFFYDKSYVRIEQIRLQLRKLKSQHKELGIAF 161 (338)
T ss_dssp SSCHHHHHHHHHHHHHCCCHHHHHHTCCCHHHHHHHHHHHHHHH-HSCEEEECCTTCCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCCHHHHHHHHHHHhhCCCHHHHhcCCCCHHHHHHHHHHHHHHh-cCCeEEeCCCCCcHHHHHHHHHHHHHhcCCCCEEE
Confidence 4577787766655444555443333 355555554443333332 122333442333666655433 232 456666
Q ss_pred ee-----------ccccccHHHHHHHH-HHHHHcCCcEEE-ecCC--CCC-C--chhHhhhh
Q 040341 158 LK-----------VNQIGSVTESIEAV-KMSKRAGWGVMA-SHRS--GET-E--DTFIADLS 201 (251)
Q Consensus 158 IK-----------~nqiGtlte~l~~~-~~a~~~g~~~iv-s~rs--gEt-~--d~~iadLA 201 (251)
|- .|+..-+++..+.+ .+|++.++.|++ ||-+ .|. . .+.++||-
T Consensus 162 IDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~lsQl~R~~e~r~dkrP~lsDLr 223 (338)
T 4a1f_A 162 IDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIK 223 (338)
T ss_dssp EEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEEEECCGGGGGSSSCSCCGGGSE
T ss_pred EechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEEEecCccccccccCCCChHhcc
Confidence 53 23334455555544 479999999954 5533 222 1 25666764
No 420
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=20.76 E-value=1.8e+02 Score=25.42 Aligned_cols=57 Identities=9% Similarity=0.028 Sum_probs=37.7
Q ss_pred ceEEEcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHcCCc----EEEecC
Q 040341 128 HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG----VMASHR 188 (251)
Q Consensus 128 ~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~----~ivs~r 188 (251)
.+.|+..+.+-++...+-+-+....+++|++= +...++..+++.+++.|+. +||+..
T Consensus 182 g~~v~~~~~~~~d~~~~l~~i~~~~~~vii~~----~~~~~~~~~~~~a~~~g~~~~~~~~i~~~ 242 (433)
T 4f11_A 182 DIEISDTESFSNDPCTSVKKLKGNDVRIILGQ----FDQNMAAKVFCCAYEENMYGSKYQWIIPG 242 (433)
T ss_dssp SCEEEEEEEESSCCHHHHHHHHHTTCCEEEEE----CCHHHHHHHHHHHHHTTCCSTTCEEEEES
T ss_pred CceEEEEeccCcCHHHHHHHHhhCCCeEEEEe----CcHHHHHHHHHHHHHcCCCCCCeEEEEcC
Confidence 45677665443444444344555567777773 5677889999999999985 577664
No 421
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.75 E-value=2.3e+02 Score=20.07 Aligned_cols=65 Identities=12% Similarity=0.122 Sum_probs=35.5
Q ss_pred cCCceeecCCCCcccHHHHH---HHHhhhCCceEE--EcccccccCHHHHHHHHhccCcceeEeeccccccHHHHHH
Q 040341 100 DHPIVSIEDPFDQDDWEHHA---ELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIE 171 (251)
Q Consensus 100 ~ypI~~IEDP~~e~D~~~~~---~l~~~lg~~~~i--vgDdl~vtn~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~ 171 (251)
.+.++.+.--+.. ..++. .+.+. ...++| +.+. .+.+.+.++++.+ +..++.||-....+.++++
T Consensus 67 ~~dlvi~D~~l~~--~~g~~~~~~l~~~-~~~~~ii~lt~~---~~~~~~~~~~~~g-a~~~l~Kp~~~~~L~~~i~ 136 (146)
T 4dad_A 67 AFDILMIDGAALD--TAELAAIEKLSRL-HPGLTCLLVTTD---ASSQTLLDAMRAG-VRDVLRWPLEPRALDDALK 136 (146)
T ss_dssp TCSEEEEECTTCC--HHHHHHHHHHHHH-CTTCEEEEEESC---CCHHHHHHHHTTT-EEEEEESSCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--ccHHHHHHHHHHh-CCCCcEEEEeCC---CCHHHHHHHHHhC-CceeEcCCCCHHHHHHHHH
Confidence 3446666655543 34443 33332 223443 3332 3567777887665 5678999976555555444
No 422
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=20.71 E-value=1.6e+02 Score=26.09 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=19.5
Q ss_pred cHHHHHHHHHHHHHcCCcEEE
Q 040341 165 SVTESIEAVKMSKRAGWGVMA 185 (251)
Q Consensus 165 tlte~l~~~~~a~~~g~~~iv 185 (251)
+..+++++++.|+++|+.||+
T Consensus 95 ~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 95 SDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 688899999999999999988
No 423
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=20.67 E-value=1.5e+02 Score=26.07 Aligned_cols=21 Identities=10% Similarity=0.172 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHcCCcEEEec
Q 040341 167 TESIEAVKMSKRAGWGVMASH 187 (251)
Q Consensus 167 te~l~~~~~a~~~g~~~ivs~ 187 (251)
....++++.+++++..++|+-
T Consensus 73 ~~v~~~~~~~~~~~~d~IIav 93 (370)
T 1jq5_A 73 NEVERIANIARKAEAAIVIGV 93 (370)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEe
Confidence 333344444444444444443
No 424
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=20.63 E-value=1.4e+02 Score=27.20 Aligned_cols=67 Identities=15% Similarity=0.180 Sum_probs=36.7
Q ss_pred CHHHHHHHHhccCcceeEeeccccccHHHHHHHHHHHHHc-CCcEEEecCCCCCCchhHhhhhhhcccCccccC
Q 040341 140 NPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRA-GWGVMASHRSGETEDTFIADLSVGLATGQIKTG 212 (251)
Q Consensus 140 n~~~i~~~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~-g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G 212 (251)
+.++++..++.+ ++.|.|-... |.-....+.++..++. +..++++.- ...-.|..+...++..|+.|
T Consensus 145 ~~e~~~~lveaG-vdvIvldta~-G~~~~~~e~I~~ik~~~~i~Vi~g~V----~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 145 EIERAKLLVEAG-VDVIVLDSAH-GHSLNIIRTLKEIKSKMNIDVIVGNV----VTEEATKELIENGADGIKVG 212 (400)
T ss_dssp -CHHHHHHHHHT-CSEEEECCSC-CSBHHHHHHHHHHHTTCCCEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcC-CCEEEEeCCC-CCcccHHHHHHHHHhcCCCeEEEeec----CCHHHHHHHHHcCCCEEEEe
Confidence 356667666665 4555543222 3223445666666554 777776421 11223556667778888775
No 425
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=20.50 E-value=3.4e+02 Score=21.82 Aligned_cols=75 Identities=15% Similarity=0.066 Sum_probs=38.9
Q ss_pred CcccHHHHHHHHhhhCCceEEEcccccccCHHHHHH----HHhccCcceeEeeccccccHHHHHHHHHHHHHcCCcEEEe
Q 040341 111 DQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEK----AIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMAS 186 (251)
Q Consensus 111 ~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~----~i~~~a~n~ilIK~nqiGtlte~l~~~~~a~~~g~~~ivs 186 (251)
.+++...++++.+..|=++..+.=. +-.+.+.+++ |...+ +..+.+-|+. ...-+++++|+++|+.+.+=
T Consensus 61 ~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lG-a~~v~~~~~~----~~~~~l~~~a~~~gv~l~~E 134 (262)
T 3p6l_A 61 DAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAMD-LEFITCEPAL----SDWDLVEKLSKQYNIKISVH 134 (262)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHTT-CSEEEECCCG----GGHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHcC-CCEEEecCCH----HHHHHHHHHHHHhCCEEEEE
Confidence 3456777888777775444333211 1112233333 33333 4455555542 12235667788888887766
Q ss_pred cCCCC
Q 040341 187 HRSGE 191 (251)
Q Consensus 187 ~rsgE 191 (251)
...++
T Consensus 135 n~~~~ 139 (262)
T 3p6l_A 135 NHPQP 139 (262)
T ss_dssp CCSSS
T ss_pred eCCCc
Confidence 65443
No 426
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=20.38 E-value=4.6e+02 Score=24.28 Aligned_cols=117 Identities=12% Similarity=0.174 Sum_probs=65.4
Q ss_pred HHHHHHhhhc-CCceee--cCCCCcccHHHHHHHHhhhCCceEEEcccccccCHHHHHHHHhccCcceeEee--ccc---
Q 040341 91 KNVYRSFISD-HPIVSI--EDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK--VNQ--- 162 (251)
Q Consensus 91 id~~~~l~~~-ypI~~I--EDP~~e~D~~~~~~l~~~lg~~~~ivgDdl~vtn~~~i~~~i~~~a~n~ilIK--~nq--- 162 (251)
.+....+++. ..++.| -.|..+.-++..+++.+..+ .++|+.- .+.+++.++.+++.| ++++.+- |.-
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p-~~~Vi~g--~v~t~e~a~~l~~aG-aD~I~Vg~g~Gs~~~ 308 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP-HLEIIGG--NVATAEGARALIEAG-VSAVKVGIGPGSICT 308 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT-TCCEEEE--EECSHHHHHHHHHHT-CSEEEECSSCCTTBC
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCC-CceEEEc--ccCcHHHHHHHHHhC-CCEEEECCCCCcCcc
Confidence 4556665554 234433 34433333455556666664 3556543 367888888887765 4555541 111
Q ss_pred --------cccHHHHHHHHHHHHHcCCcEEEecCCCCCCchhHhhhhhhcccCccccCCC
Q 040341 163 --------IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 214 (251)
Q Consensus 163 --------iGtlte~l~~~~~a~~~g~~~ivs~rsgEt~d~~iadLAva~~~~~ik~G~~ 214 (251)
...++...++++.+++.+++++.+..-...+ +.. -|+++|+..+-.|..
T Consensus 309 tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~-di~--kala~GAd~V~iGs~ 365 (496)
T 4fxs_A 309 TRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSG-DIS--KAIAAGASCVMVGSM 365 (496)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHH-HHH--HHHHTTCSEEEESTT
T ss_pred cccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHH-HHH--HHHHcCCCeEEecHH
Confidence 2345666777777778899998876533322 111 134556777777754
No 427
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=20.38 E-value=2.3e+02 Score=25.10 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=49.1
Q ss_pred cccccc-CHHHHHHHHhccCccee--Eeec-----cccccHHHHHHHHHHHHHcCCcEEE----ecCCC-C----CCc--
Q 040341 134 DDLLVT-NPKRVEKAIKEKTCNAL--LLKV-----NQIGSVTESIEAVKMSKRAGWGVMA----SHRSG-E----TED-- 194 (251)
Q Consensus 134 Ddl~vt-n~~~i~~~i~~~a~n~i--lIK~-----nqiGtlte~l~~~~~a~~~g~~~iv----s~rsg-E----t~d-- 194 (251)
|+.++. +++++.+ + .++++ ++.+ +..-++.++-++++.|++.|+.+|+ +.|.| . +.-
T Consensus 126 d~~~~~~sVe~Avr---l-GADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~ 201 (307)
T 3fok_A 126 DDRYTGYNVSSMVD---R-GVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDA 201 (307)
T ss_dssp SCCCCSCCHHHHHH---H-TCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHH
T ss_pred cccccccCHHHHHH---C-CCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHH
Confidence 444454 6665544 4 34452 2333 4556788888999999999999976 34422 2 111
Q ss_pred -hhHhhhhhhcccC----ccccCCC
Q 040341 195 -TFIADLSVGLATG----QIKTGAP 214 (251)
Q Consensus 195 -~~iadLAva~~~~----~ik~G~~ 214 (251)
...+-+|..+|+. .+|+--+
T Consensus 202 Va~aaRiAaELGADs~~tivK~~y~ 226 (307)
T 3fok_A 202 VIQSVAIAAGLGNDSSYTWMKLPVV 226 (307)
T ss_dssp HHHHHHHHHTCSSCCSSEEEEEECC
T ss_pred HHHHHHHHHHhCCCcCCCEEEeCCc
Confidence 4456678888999 9998555
No 428
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=20.37 E-value=2.1e+02 Score=23.11 Aligned_cols=16 Identities=13% Similarity=0.042 Sum_probs=7.5
Q ss_pred HHHHHHHcCCcEEEec
Q 040341 172 AVKMSKRAGWGVMASH 187 (251)
Q Consensus 172 ~~~~a~~~g~~~ivs~ 187 (251)
.++.+++.|+++++=.
T Consensus 77 ~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 77 TVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHTTSSCEEEES
T ss_pred HHHHHHHCCCCEEEEe
Confidence 3344455555554433
No 429
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=20.30 E-value=4.8e+02 Score=23.58 Aligned_cols=99 Identities=11% Similarity=0.037 Sum_probs=61.5
Q ss_pred hhhHHHHHHHhhhcCC-----ceeecCCCCcccHHHHHHHHhhhCCceE-EEccc--ccccCHHHHHHHHhcc----Ccc
Q 040341 87 GDGLKNVYRSFISDHP-----IVSIEDPFDQDDWEHHAELTGKIGRHVQ-IVGDD--LLVTNPKRVEKAIKEK----TCN 154 (251)
Q Consensus 87 ~~elid~~~~l~~~yp-----I~~IEDP~~e~D~~~~~~l~~~lg~~~~-ivgDd--l~vtn~~~i~~~i~~~----a~n 154 (251)
..+.+......+-+-+ -|.+++|-.. .|....+..|.++. +-.|+ -+-.+++.++++++.. ...
T Consensus 162 ~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~----~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k 237 (498)
T 3ihj_A 162 ASDGISTILKILVSGGGKSRTGVMIPIPQYP----LYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPK 237 (498)
T ss_dssp HHHHHHHHHHHHCCCCGGGSEEEEEEESCCT----HHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEeCCCch----hHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCe
Confidence 5566666666554422 7889999664 56666666654432 22342 1245889999988763 233
Q ss_pred eeE-eeccc-cc---cHHHHHHHHHHHHHcCCcEEEecCC
Q 040341 155 ALL-LKVNQ-IG---SVTESIEAVKMSKRAGWGVMASHRS 189 (251)
Q Consensus 155 ~il-IK~nq-iG---tlte~l~~~~~a~~~g~~~ivs~rs 189 (251)
+++ +-||. .| +..+..+++++|+++|+.+++-.--
T Consensus 238 ~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y 277 (498)
T 3ihj_A 238 VLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVY 277 (498)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred EEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCc
Confidence 333 34532 34 4477888999999999988776543
No 430
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=20.26 E-value=70 Score=29.35 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=25.9
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEE----ecCCCCC
Q 040341 162 QIGSVTESIEAVKMSKRAGWGVMA----SHRSGET 192 (251)
Q Consensus 162 qiGtlte~l~~~~~a~~~g~~~iv----s~rsgEt 192 (251)
+.||..+..+.++.|+++|++||+ .|.+.+.
T Consensus 77 ~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~~ 111 (488)
T 1wza_A 77 DYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSERH 111 (488)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCTTS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeccccccCcc
Confidence 479999999999999999999964 5665543
No 431
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=20.08 E-value=2.5e+02 Score=21.28 Aligned_cols=68 Identities=15% Similarity=0.145 Sum_probs=42.8
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcCCccceeeeeehhhhcccccCCcceeecCCCCCCCCCCccChhhHHHHHHHhhhcCC
Q 040341 23 GFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 102 (251)
Q Consensus 23 Gfap~~~~~eeal~~i~~Ai~~aGy~~kI~iglD~Aase~~~~~~g~Y~l~~~~~~~d~~~~~s~~elid~~~~l~~~yp 102 (251)
.|-|++. .|+..+.|.-+| ..|| .|++..+-...++ +.|=-.++.|-. ...++++.+.-+.+-.+.||
T Consensus 14 SyLP~Lt-~eqI~kQV~yll-~qGw----~~~lE~~d~~~~~---~~yW~mWklPmf---~~~d~~~Vl~Ele~C~k~~p 81 (118)
T 3zxw_B 14 SYLPPLS-DAQIARQIQYAI-DQGY----HPCVEFNETSNAE---IRYWTMWKLPLF---NCTNAQDVLNEVQQCRSEYP 81 (118)
T ss_dssp CCSCCCC-HHHHHHHHHHHH-HHTC----EEEEEEESCCCTT---CCCCEEESSCCT---TCCCHHHHHHHHHHHHHHCT
T ss_pred ccCCCCC-HHHHHHHHHHHH-hCCC----eeEEEeccCCCcc---cCEEeecccCCc---CCCCHHHHHHHHHHHHHHCC
Confidence 5789985 588899999988 7898 4666665554554 466222333322 24466676666666556676
No 432
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=20.01 E-value=2.2e+02 Score=19.61 Aligned_cols=80 Identities=13% Similarity=0.126 Sum_probs=41.1
Q ss_pred ChhhHHHHHHHhhhcCCceeecCCCCcccH-HHHHHHHhhhC-CceEEE-cccccccCHHHHHHHHhccCcceeEeeccc
Q 040341 86 SGDGLKNVYRSFISDHPIVSIEDPFDQDDW-EHHAELTGKIG-RHVQIV-GDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162 (251)
Q Consensus 86 s~~elid~~~~l~~~ypI~~IEDP~~e~D~-~~~~~l~~~lg-~~~~iv-gDdl~vtn~~~i~~~i~~~a~n~ilIK~nq 162 (251)
+.++.++.+.+ ..+.++.+.-.+...|- +-...+.+.-. ..++|+ ... .+...+.++.+.+ ++.++.||-.
T Consensus 38 ~~~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~---~~~~~~~~~~~~g-~~~~l~kP~~ 111 (132)
T 3lte_A 38 NGFDAGIKLST--FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG---LDKAKLQQAVTEG-ADDYLEKPFD 111 (132)
T ss_dssp SHHHHHHHHHH--TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC---SCSHHHHHHHHHT-CCEEECSSCC
T ss_pred CHHHHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC---CChHHHHHHHHhC-hHHHhhCCCC
Confidence 44565555443 34557777666655443 33334443321 123333 222 1233566777665 6788999976
Q ss_pred cccHHHHHH
Q 040341 163 IGSVTESIE 171 (251)
Q Consensus 163 iGtlte~l~ 171 (251)
...+.++++
T Consensus 112 ~~~l~~~i~ 120 (132)
T 3lte_A 112 NDALLDRIH 120 (132)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 544444443
Done!