BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040342
(131 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 42 IRCFHENELKIATKNYDRQKVITTGLGYELFKGFLHDYPVSIMKFVNSD--YAAEFCFNN 99
++ F EL++A+ N+ + ++ G +++KG L D + +K + + E F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 100 IV-FASQMNHKNVIRLIGCCLETENPVLVFEYV 131
V S H+N++RL G C+ +LV+ Y+
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 117
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 42 IRCFHENELKIATKNYDRQKVITTGLGYELFKGFLHDYPVSIMKFVNSD--YAAEFCFNN 99
++ F EL++A+ N+ + ++ G +++KG L D + +K + + E F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 100 IV-FASQMNHKNVIRLIGCCLETENPVLVFEYV 131
V S H+N++RL G C+ +LV+ Y+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 109
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 42 IRCFHENELKIATKNYDRQKVITTGLGYELFKGFLHD------YPVSIMKFVNSDYAA-- 93
+R E ELK R KV+ +G ++KG PV+I K +N
Sbjct: 32 LRILKETELK-------RVKVLGSGAFGTVYKGIWVPEGETVKIPVAI-KILNETTGPKA 83
Query: 94 --EFCFNNIVFASQMNHKNVIRLIGCCL 119
EF ++ AS M+H +++RL+G CL
Sbjct: 84 NVEFMDEALIMAS-MDHPHLVRLLGVCL 110
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 42 IRCFHENELKIATKNYDRQKVITTGLGYELFKGFLHD------YPVSIMKFVNSDYAA-- 93
+R E ELK R KV+ +G ++KG PV+I K +N
Sbjct: 9 LRILKETELK-------RVKVLGSGAFGTVYKGIWVPEGETVKIPVAI-KILNETTGPKA 60
Query: 94 --EFCFNNIVFASQMNHKNVIRLIGCCL 119
EF ++ AS M+H +++RL+G CL
Sbjct: 61 NVEFMDEALIMAS-MDHPHLVRLLGVCL 87
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 81 VSIMKFVNSD---YAAEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
V+I KF+ SD + I Q+ H+N++ L+ C + + LVFE+V
Sbjct: 53 VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
>pdb|2CQZ|A Chain A, Crystal Structure Of Ph0347 Protein From Pyrococcus
Horikoshii Ot3
pdb|2CQZ|B Chain B, Crystal Structure Of Ph0347 Protein From Pyrococcus
Horikoshii Ot3
pdb|2CQZ|C Chain C, Crystal Structure Of Ph0347 Protein From Pyrococcus
Horikoshii Ot3
pdb|2CQZ|D Chain D, Crystal Structure Of Ph0347 Protein From Pyrococcus
Horikoshii Ot3
pdb|2CQZ|E Chain E, Crystal Structure Of Ph0347 Protein From Pyrococcus
Horikoshii Ot3
pdb|2CQZ|F Chain F, Crystal Structure Of Ph0347 Protein From Pyrococcus
Horikoshii Ot3
Length = 177
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 55 KNYDRQKVITTGLGYELFKGFLHDYPVSIMKFVNSDYAAEFCFNNI 100
K D +K + + ++L + + D P+S +FV+ D A F +
Sbjct: 56 KRIDVEKALKMAIVHDLAEAIITDIPLSAQEFVDKDKAEALVFKKV 101
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 49 ELKIATKNYDRQKVITTGLGYELFKGFLHDYPVSIMK--FVNSDYAAEFCFNNIVFASQM 106
+L+ AT N+D + +I G+ +++KG L D +K S E I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 107 NHKNVIRLIGCCLETENPVLVFEYV 131
H +++ LIG C E +L+++Y+
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYM 117
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 49 ELKIATKNYDRQKVITTGLGYELFKGFLHDYPVSIMK--FVNSDYAAEFCFNNIVFASQM 106
+L+ AT N+D + +I G+ +++KG L D +K S E I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 107 NHKNVIRLIGCCLETENPVLVFEYV 131
H +++ LIG C E +L+++Y+
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYM 117
>pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 30.4 bits (67), Expect = 0.28, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 65 TGLGYELFKGFLHDYPVSIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRL 114
+ L +L + + YP I F +S+ AEF F VF + + H+ V L
Sbjct: 939 SSLAVDLMRNYCQRYPDVIDFFGDSNDRAEFVFEQDVFPNAVGHRRVEEL 988
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Query: 104 SQMNHKNVIRLIGCCLETENPV-LVFEYV 131
S++NH N+++L G CL NPV LV EY
Sbjct: 57 SRVNHPNIVKLYGACL---NPVCLVMEYA 82
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 59 RQKVITTGLGYELFKGFLH------DYPVSIMKFVNSDYAAEFCFNNIVFAS---QMNHK 109
RQKVI G E++KG L + PV+I K + + Y + + + A Q +H
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAI-KTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 110 NVIRLIGCCLETENPVLVFEYV 131
N+IRL G + + +++ EY+
Sbjct: 107 NIIRLEGVISKYKPMMIITEYM 128
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Query: 104 SQMNHKNVIRLIGCCLETENPV-LVFEYV 131
S++NH N+++L G CL NPV LV EY
Sbjct: 56 SRVNHPNIVKLYGACL---NPVCLVMEYA 81
>pdb|1K25|A Chain A, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
pdb|1K25|B Chain B, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
pdb|1K25|C Chain C, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
pdb|1K25|D Chain D, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
Length = 685
Score = 29.3 bits (64), Expect = 0.68, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 31 LIKSCDNKRNPI-RCFHENELKIA---TKNYDRQKVITTGLGYELFKGFLHDYPVSI 83
L S DN P F+ +ELKIA T+++D + +TTG +GF H V +
Sbjct: 279 LASSIDNNTFPSGEYFNSSELKIADATTRDWDVNEGLTTGGMMTFLQGFAHSSNVGM 335
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 83 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 132
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 84 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 64 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 65 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 62 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 111
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 63 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 57 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 106
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 60 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 109
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 65 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 64 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 124 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 65 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 70 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 66 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 66 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 65 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 82 SIMKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETE-NPVLVFEYV 131
S+ + + ++F I+ +H NV+ L+G CL +E +P++V Y+
Sbjct: 63 SLNRITDIGEVSQFLTEGIIM-KDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N++RLIG C + + +V E V
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELV 194
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N++RLIG C + + +V E V
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELV 194
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 104 SQMNHKNVIRLIGCCLETENPVLVFEYV 131
+ + H++++R G C E ++VFEY+
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYM 125
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 104 SQMNHKNVIRLIGCCLETENPVLVFEYV 131
+ + H++++R G C E ++VFEY+
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYM 102
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 104 SQMNHKNVIRLIGCCLETENPVLVFEYV 131
+ + H++++R G C E ++VFEY+
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYM 96
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
Q+NH +VI+L G C + +L+ EY
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYA 108
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
Q+NH +VI+L G C + +L+ EY
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYA 108
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
Q+NH +VI+L G C + +L+ EY
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYA 108
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 20/28 (71%)
Query: 104 SQMNHKNVIRLIGCCLETENPVLVFEYV 131
+ + H+++++ G C+E + ++VFEY+
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYM 97
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|3C0B|A Chain A, Crystal Structure Of The Conserved Archaeal Protein
Q6m145. Northeast Structural Genomics Consortium Target
Mrr63
pdb|3C0B|B Chain B, Crystal Structure Of The Conserved Archaeal Protein
Q6m145. Northeast Structural Genomics Consortium Target
Mrr63
pdb|3C0B|C Chain C, Crystal Structure Of The Conserved Archaeal Protein
Q6m145. Northeast Structural Genomics Consortium Target
Mrr63
pdb|3C0B|D Chain D, Crystal Structure Of The Conserved Archaeal Protein
Q6m145. Northeast Structural Genomics Consortium Target
Mrr63
pdb|3CET|A Chain A, Crystal Structure Of The Pantheonate Kinase-Like Protein
Q6m145 At The Resolution 1.8 A. Northeast Structural
Genomics Consortium Target Mrr63
pdb|3CET|B Chain B, Crystal Structure Of The Pantheonate Kinase-Like Protein
Q6m145 At The Resolution 1.8 A. Northeast Structural
Genomics Consortium Target Mrr63
Length = 334
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 47 ENELKIATKNYDRQKVITTGLGYELFKGFLHDYPV 81
EN +A K Y +KV+ TGLG + K L D+ V
Sbjct: 265 ENVENVAEK-YGSKKVVITGLGENILKDALADFEV 298
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 28 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 126
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 40 NPIRCFHENELKIATKNYDRQKVITTGLGYELFKGFLH-------DYPVSIMKFVNSDYA 92
+P + HE ++ N KV+ G E+ G L + +K ++
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 93 AEFCFNNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
Q +H N+IRL G +++ ++V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
>pdb|1XX7|A Chain A, Conserved Hypothetical Protein From Pyrococcus Furiosus
Pfu- 403030-001
pdb|1XX7|B Chain B, Conserved Hypothetical Protein From Pyrococcus Furiosus
Pfu- 403030-001
pdb|1XX7|C Chain C, Conserved Hypothetical Protein From Pyrococcus Furiosus
Pfu- 403030-001
pdb|1XX7|D Chain D, Conserved Hypothetical Protein From Pyrococcus Furiosus
Pfu- 403030-001
pdb|1XX7|E Chain E, Conserved Hypothetical Protein From Pyrococcus Furiosus
Pfu- 403030-001
pdb|1XX7|F Chain F, Conserved Hypothetical Protein From Pyrococcus Furiosus
Pfu- 403030-001
Length = 184
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 42 IRCFHENELKIATKNYDRQKVITTGLGYELFKGFLHDYPVSIMKFVNSDYAAEFCFNNIV 101
I ELK D +K + + ++L + + D P+S K++N + A +++
Sbjct: 48 ITLLLAEELKKKGVEIDVEKALKIAIIHDLGEAIITDLPLSAQKYLNKEEAEAKALKDVL 107
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 49 ELKIATKNYDRQKVITTG--LGYE----LFKGFLHDYPVSIMKF-----VNSDYAAEFCF 97
ELK T N+D + + G +G ++KG++++ V++ K + ++ +
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 98 NNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
I ++ H+N++ L+G + ++ LV+ Y+
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 98 NNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
N I +Q++H N+I+L + VLV EYV
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYA 123
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
+++H +++L G CLE LVFE++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFM 84
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 49 ELKIATKNYDRQKVITTG--LGYE----LFKGFLHDYPVSIMKF-----VNSDYAAEFCF 97
ELK T N+D + + G +G ++KG++++ V++ K + ++ +
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 98 NNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
I ++ H+N++ L+G + ++ LV+ Y+
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 49 ELKIATKNYDRQKVITTG--LGYE----LFKGFLHDYPVSIMKF-----VNSDYAAEFCF 97
ELK T N+D + + G +G ++KG++++ V++ K + ++ +
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 98 NNIVFASQMNHKNVIRLIGCCLETENPVLVFEYV 131
I ++ H+N++ L+G + ++ LV+ Y+
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYA 123
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 54 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 104 SQMNHKNVIRLIGCCLETENPVLVFEYV 131
+ + H N+I L G CL+ N LV E+
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFA 88
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 123 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
+++H +++L G CLE LVFE++
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFM 87
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
+++H +++L G CLE LVFE++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFM 84
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
+++H +++L G CLE LVFE++
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFM 104
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 105 QMNHKNVIRLIGCCLETENPVLVFEYV 131
+++H +++L G CLE LVFE++
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFM 82
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 57 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 69 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 115
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 65 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 65 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 66 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 112
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 65 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 58 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 65 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 50 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 90 DYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
D A E +++V +M HKN+I L+G C + ++ EY
Sbjct: 64 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 110
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 107 NHKNVIRLIGCCLETEN 123
+H NVIRL+G C+E +
Sbjct: 94 SHPNVIRLLGVCIEMSS 110
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQM-----NHKNVIRLIGCCLETENPVLVFEYV 131
+K + SD A E ++++ +M HKN+I L+G C + ++ EY
Sbjct: 106 VKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 24 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S++NH+N++R IG L++
Sbjct: 84 PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQS 120
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 49 ELKIATKNYDRQKVITTG-----LGYEL-FKGFLHDYPVSIMKF-----VNSDYAAEFCF 97
ELK T N+D + + G G+ + +KG++++ V++ K + ++ +
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 98 NNIVFASQMNHKNVIRLIGCCLETENPVLVFEY 130
I ++ H+N++ L+G + ++ LV+ Y
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVY 102
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 26.2 bits (56), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 81 VSIMKFVNSDYAAEFCFNNIV----FASQMNHKNVIRLIGCCLETENPVLVFEY 130
V+I K S + + +I+ F ++ H N I+ GC L LV EY
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 26.2 bits (56), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETENPV-LVFEYV 131
+K + +D A+ +Q+ H N+++L+G +E + + +V EY+
Sbjct: 49 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 107 NHKNVIRLIGCCLETENPVLVFEY 130
+H+N++ L+G C + L+FEY
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEY 130
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETENPV-LVFEYV 131
+K + +D A+ +Q+ H N+++L+G +E + + +V EY+
Sbjct: 34 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 84 MKFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLETENPV-LVFEYV 131
+K + +D A+ +Q+ H N+++L+G +E + + +V EY+
Sbjct: 40 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 88
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 81 VSIMKFVNSDYAAEFCFNNIV----FASQMNHKNVIRLIGCCLETENPVLVFEY 130
V+I K S + + +I+ F ++ H N I+ GC L LV EY
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 7/28 (25%), Positives = 19/28 (67%)
Query: 104 SQMNHKNVIRLIGCCLETENPVLVFEYV 131
+ + H+++++ G C + + ++VFEY+
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYM 99
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 96 CFNNIVFASQMNHKNVIRLIGCCLETENPV-LVFEYV 131
I ++NH N+++L+ + TEN + LVFE+V
Sbjct: 48 AIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHV 83
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 96 CFNNIVFASQMNHKNVIRLIGCCLETENPV-LVFEYV 131
I ++NH N+++L+ + TEN + LVFE+V
Sbjct: 52 AIREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHV 87
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 26 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 85
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S+ NH+N++R IG L++
Sbjct: 86 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 122
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 24 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S+ NH+N++R IG L++
Sbjct: 84 PEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 120
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 50 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 109
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S+ NH+N++R IG L++
Sbjct: 110 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 9 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S+ NH+N++R IG L++
Sbjct: 69 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 9 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S+ NH+N++R IG L++
Sbjct: 69 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 40 NPIRCFHENELKIATKNYDRQKVIT--TGLGY----ELFKGFLHDYP---------VSIM 84
NP CF I+ +K IT GLG+ E+++G + P V +
Sbjct: 27 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 86
Query: 85 KFVNSDYAAEFCFNNIVFASQMNHKNVIRLIGCCLET 121
V S+ + S+ NH+N++R IG L++
Sbjct: 87 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 123
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 56 NYDRQKVITTGLGYELFKG--FLHDYPVSIMKFVNSDY----AAEFCFNNIVFASQMNHK 109
N+ +K I G E+++ L PV++ K D A C I Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 110 NVIRLIGCCLETENPVLVFE 129
NVI+ +E +V E
Sbjct: 93 NVIKYYASFIEDNELNIVLE 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.327 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,746,074
Number of Sequences: 62578
Number of extensions: 137556
Number of successful extensions: 733
Number of sequences better than 100.0: 104
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 664
Number of HSP's gapped (non-prelim): 104
length of query: 131
length of database: 14,973,337
effective HSP length: 88
effective length of query: 43
effective length of database: 9,466,473
effective search space: 407058339
effective search space used: 407058339
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 46 (22.3 bits)