BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040345
LRAMNWIQRKIHLYNVTFGLYMLDWWERYLFNILVVVLMWFIFYNGSKYVTDFFQRHLTV
T

High Scoring Gene Products

Symbol, full name Information P value
AT1G06515 protein from Arabidopsis thaliana 1.1e-23
AT2G30942 protein from Arabidopsis thaliana 5.5e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040345
        (61 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713417 - symbol:AT1G06515 "AT1G06515" spec...   272  1.1e-23   1
TAIR|locus:1006230071 - symbol:AT2G30942 "AT2G30942" spec...   256  5.5e-22   1
ASPGD|ASPL0000004122 - symbol:AN6592 species:162425 "Emer...    92  0.00013   1


>TAIR|locus:4010713417 [details] [associations]
            symbol:AT1G06515 "AT1G06515" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007592
            InterPro:IPR024512 Pfam:PF11779 IPI:IPI00846793
            RefSeq:NP_001077469.1 RefSeq:NP_001077470.1 UniGene:At.42338
            UniGene:At.47691 PRIDE:A8MSB8 EnsemblPlants:AT1G06515.1
            EnsemblPlants:AT1G06515.2 GeneID:5007668 KEGG:ath:AT1G06515
            TAIR:At1g06515 eggNOG:NOG253352 HOGENOM:HOG000015217 OMA:GTRYFSE
            PhylomeDB:A8MSB8 ProtClustDB:CLSN2681263 Genevestigator:A8MSB8
            Uniprot:A8MSB8
        Length = 56

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 45/56 (80%), Positives = 52/56 (92%)

Query:     4 MNWIQRKIHLYNVTFGLYMLDWWERYLFNILVVVLMWFIFYNGSKYVTDFFQRHLT 59
             MNW+QRKI+LYNVTFGLYMLDWWERYLFN LVVVLMWF+ YNG++Y ++ FQRHLT
Sbjct:     1 MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQRHLT 56


>TAIR|locus:1006230071 [details] [associations]
            symbol:AT2G30942 "AT2G30942" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR024512 Pfam:PF11779
            IPI:IPI00528394 RefSeq:NP_973572.1 UniGene:At.49557
            EnsemblPlants:AT2G30942.1 GeneID:2745572 KEGG:ath:AT2G30942
            OMA:LVIVLMW PhylomeDB:F4IPU5 Uniprot:F4IPU5
        Length = 56

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 42/56 (75%), Positives = 51/56 (91%)

Query:     4 MNWIQRKIHLYNVTFGLYMLDWWERYLFNILVVVLMWFIFYNGSKYVTDFFQRHLT 59
             MNW+QRKI+LYNVTFGLYMLDWWERYLFN LV++LMWFI YNGS+Y ++  +RHL+
Sbjct:     1 MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVLILMWFILYNGSRYFSELCKRHLS 56


>ASPGD|ASPL0000004122 [details] [associations]
            symbol:AN6592 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] EMBL:BN001301 EMBL:AACD01000110 InterPro:IPR024512
            Pfam:PF11779 RefSeq:XP_664196.1 EnsemblFungi:CADANIAT00007370
            GeneID:2870660 KEGG:ani:AN6592.2 eggNOG:NOG135774
            HOGENOM:HOG000201329 OrthoDB:EOG4617DW Uniprot:Q5AYN8
        Length = 119

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     4 MNWIQRKIHLYNVTFGLYMLDWWERYLFNILVVVLMWFIFYNGSKYVTD 52
             + W++ KI+ Y VTF +YML   E+++FN +++ L+  I      Y+ D
Sbjct:    11 IRWVRLKIYQYEVTFAVYMLTPTEKFIFNSILLTLISMILTAAYVYLPD 59


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.337   0.146   0.524    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       61        61   0.00091  102 3  11 21  0.40    27
                                                     29  0.39    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  523 (56 KB)
  Total size of DFA:  110 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.52u 0.09s 7.61t   Elapsed:  00:00:02
  Total cpu time:  7.52u 0.09s 7.61t   Elapsed:  00:00:02
  Start:  Fri May 10 15:01:20 2013   End:  Fri May 10 15:01:22 2013

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