Query         040351
Match_columns 232
No_of_seqs    111 out of 276
Neff          5.5 
Searched_HMMs 29240
Date          Mon Mar 25 12:02:07 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040351hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3iir_A Trypsin inhibitor; beta 100.0 1.6E-63 5.5E-68  426.0  18.6  180   28-227     1-187 (190)
  2 3s8k_A Latex serine proteinase 100.0 5.4E-62 1.9E-66  414.7  19.6  173   26-223     2-184 (184)
  3 2qn4_A RASI, alpha-amylase/sub 100.0 1.9E-60 6.6E-65  409.8  18.8  181    9-224     7-197 (200)
  4 3tc2_A Kunitz-type proteinase  100.0 3.3E-60 1.1E-64  404.5  19.8  179   22-221     1-186 (187)
  5 1tie_A Erythrina trypsin inhib 100.0 8.5E-59 2.9E-63  391.3  19.4  169   29-223     1-171 (172)
  6 1r8n_A STI, kunitz trypsin inh 100.0 1.1E-58 3.7E-63  394.7  18.0  176   26-227     2-183 (185)
  7 1eyl_A RWCI-3, chymotrypsin in 100.0 2.1E-58 7.2E-63  393.2  19.7  176   25-225     2-182 (186)
  8 4an6_A Trypsin inhibitor; kuni 100.0 1.4E-58 4.7E-63  393.8  15.2  174   28-226     2-179 (185)
  9 2gzb_A Kunitz-type proteinase  100.0 2.9E-57   1E-61  380.0  20.8  163   27-223     2-165 (166)
 10 3bx1_D BASI, alpha-amylase/sub 100.0 1.9E-57 6.4E-62  385.8  17.8  171   25-223     1-180 (181)
 11 1avw_B STI, trypsin inhibitor; 100.0   9E-57 3.1E-61  380.5  19.2  173   28-222     1-177 (177)
 12 2dre_A Water-soluble chlorophy 100.0 7.6E-56 2.6E-60  375.7  20.2  171   26-222     3-179 (180)
 13 1wba_A Winged bean albumin 1;  100.0 2.5E-55 8.4E-60  371.1  18.3  166   26-223     1-174 (175)
 14 3e8l_C Serine proteinase inhib 100.0 1.9E-55 6.7E-60  374.5  15.8  166   28-222     9-185 (185)
 15 1r8o_A STI, kunitz trypsin inh 100.0 1.7E-35 5.8E-40  228.0  10.8   92   29-125     1-94  (96)
 16 1r8o_B STI, kunitz trypsin inh  99.8 2.5E-19 8.5E-24  130.7   7.3   62  136-221     6-70  (71)
 17 3n7l_A Neurotoxin; HCR/D-SA, g  74.5      15 0.00052   34.1   9.1  112   26-155   229-355 (424)
 18 3pme_A Type C neurotoxin; stru  70.8      17 0.00057   33.8   8.5   86   27-127   220-309 (420)
 19 3rsj_A BONT/F; clostridium bot  61.8      51  0.0017   30.7   9.9   87   25-127   220-323 (413)
 20 2vu9_A Botulinum neurotoxin A   54.7 1.4E+02  0.0048   28.0  14.3   87   27-127   241-343 (444)
 21 3ffz_A Botulinum neurotoxin ty  46.4      63  0.0021   33.9   8.5   86   26-126  1068-1164(1252)
 22 2hm3_A Nematocyst outer WALL a  37.7      12  0.0004   22.0   1.0   15  174-188     7-21  (31)
 23 2vxr_A Botulinum neurotoxin ty  35.8      63  0.0022   30.5   6.1   88   27-125   272-372 (482)
 24 2v2f_A Penicillin binding prot  34.4      19 0.00063   20.0   1.5   15   25-39      4-18  (26)
 25 1a8d_A Tetanus neurotoxin; clo  34.3 1.1E+02  0.0036   28.9   7.4   80   27-109   248-339 (452)
 26 2kss_A Carotenogenesis protein  34.3      11 0.00039   27.8   0.7   24   29-52     29-52  (106)
 27 1shx_A Ephrin-A5; ephrin signa  33.7      21 0.00071   28.4   2.2   21   33-53     98-118 (138)
 28 2x8s_A Endo-alpha-1,5-L-arabin  31.0      16 0.00055   34.0   1.3   24   26-49     26-53  (470)
 29 2wo3_B Ephrin-A2; transferase-  28.7      30   0.001   28.1   2.4   21   33-53    108-128 (157)
 30 1epw_A Bontoxilysin B, botulin  25.7 1.6E+02  0.0054   31.2   7.5   92   27-126  1080-1181(1290)
 31 3hei_B Ephrin-A1; EPH receptor  23.9      46  0.0016   26.2   2.6   21   33-53     98-118 (132)
 32 2x11_B Ephrin-A5; receptor-sig  23.0      37  0.0013   28.1   2.0   21   33-53    127-147 (177)
 33 2nyy_A Botulinum neurotoxin ty  22.6 3.4E+02   0.012   28.7   9.3   93   26-127  1092-1195(1295)

No 1  
>3iir_A Trypsin inhibitor; beta-trefoil fold, hydrolase inhib; 2.90A {Murraya koenigii} SCOP: b.42.4.0
Probab=100.00  E-value=1.6e-63  Score=425.95  Aligned_cols=180  Identities=42%  Similarity=0.732  Sum_probs=163.5

Q ss_pred             CceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceEEEE
Q 040351           28 EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIKLKF  107 (232)
Q Consensus        28 ~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~lnI~F  107 (232)
                      |||||++||||++|++|||+|++||.| |||+++++++|++||++|+|++++..+|+||+|+|.+++++|||+|+|||+|
T Consensus         1 epVlD~~G~~l~~g~~YyI~p~~~g~g-GGgl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~est~lnI~F   79 (190)
T 3iir_A            1 DPLLDINGNVVEASRDYYLVSVIGGAG-GGGLTLYRGRNELCPLDVIQLSPDLHKGTRLRFAAYNNTSIIHEAVDLNVKF   79 (190)
T ss_dssp             CBCBCTTSCBCBTTSCBEEEEEEEETT-EEEEEEECCSSSSCSCEEEECSCTTCCBSCEEEEETTCCSBCBTTSCEEEEE
T ss_pred             CcCCcCCCCCCcCCCCEEEEECccCCC-CCeEEEecCCCCCCCCeeEECCCCCCCCeeEEEEecCCCCEeecCccEEEEe
Confidence            689999999999999999999999987 6689999999999999999999999999999999988889999999999999


Q ss_pred             ecCCCCCCcCCCCcEEEecCCCcCcceEEEeCCC------CCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCC
Q 040351          108 SRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEG------KTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNG  181 (232)
Q Consensus       108 ~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg~------~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~  181 (232)
                      ...   +.|++|++|+|+++|+++++|||+|||.      ++..|||||||++..          .+.|||+|||.+|+ 
T Consensus        80 ~~~---~~C~~st~W~v~~~d~~~g~~~V~tGg~~g~pg~~t~~~~FkIek~~~~----------~~~YKL~fCp~~~~-  145 (190)
T 3iir_A           80 STE---TSCNEPTVWRVDNYDPSRGKWFITTGGVEGNPGAQTLKNWFKLERVGTD----------QGTYEIVHCPSVCK-  145 (190)
T ss_dssp             SSC---CSSCSCCBCEECCCCTTTTCCBEESCCCCCCSSSSSGGGCBEEEECSSS----------SSCEEEEECCCSCT-
T ss_pred             CCC---CCCCCCCeEEEeccCccccceEEEeCCccCCCCcccccceEEEEEcCCC----------CCcEEEEEcCCcCC-
Confidence            987   8999999999998899999999999992      467899999999852          25799999999987 


Q ss_pred             CCCcccceeeEEeeCCe-eEEEEEcCCCCCCCCeeEEEEEcCCCCCc
Q 040351          182 SCDTLCKDVGVSNVDGV-QRLVVVDDNDQPNLPLPVVLFPADSGRSM  227 (232)
Q Consensus       182 ~c~~~C~dVGi~~d~g~-rrL~l~~d~~~~~~pf~V~F~ka~~~~~~  227 (232)
                      +|+..|+|||+++|+|+ ||||| +++    +||.|+|+||++++++
T Consensus       146 ~c~~~C~dvGi~~d~~~~r~L~l-~~~----~p~~V~F~ka~~~~~~  187 (190)
T 3iir_A          146 SCVFLCNDVGVSYDYRRRLALTA-GNE----RVFGVVIVPANEGSAS  187 (190)
T ss_dssp             TCCCCCEEEEEEGGGTTEEEEEC-SCS----CCCCEEEECCSSSCCC
T ss_pred             ccccccCceeEEEcCCCEEEEEE-CCC----CCeEEEEEECCCCccc
Confidence            89999999999987655 55999 654    3999999999998876


No 2  
>3s8k_A Latex serine proteinase inhibitor; kunitz-STI fold, protease inhibitor, hydrolase inhibitor; HET: NAG FUC; 1.70A {Carica papaya} PDB: 3s8j_A*
Probab=100.00  E-value=5.4e-62  Score=414.71  Aligned_cols=173  Identities=27%  Similarity=0.541  Sum_probs=157.9

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCCCCCceEE-ecCCCCCCCCceEEcCCCCCCCceEEEec-CC-CCcceecccc
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISA-DKGKNGQCPTDVIQLSPKDKRGKNLVLLP-ND-NSIIVRESTN  102 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l-~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp-~~-~~~vI~e~t~  102 (232)
                      ++++|+|++||||++|.+|||+|++||.| ||||+| ++++|++||++|+|+  +..+|+||+|+| .+ ++++|||+|+
T Consensus         2 ~~~~VlD~~G~~l~~g~~YyI~p~~~g~g-GGGl~l~~~t~n~~CPl~VvQ~--~~~~GlPV~Fs~~~~~~~~vI~est~   78 (184)
T 3s8k_A            2 APKPIVDIDGKPVLYGVDYFVVSAIWGAG-GGGLTVYGPGNKKKCPLSVVQD--PFDNGEPIIFSAIKNVKDNIVRESVD   78 (184)
T ss_dssp             CCCBCBCTTSCBCBTTSCEEEEESSCGGG-CCEEEEECCSSSCCCSCEEEEE--TTSCBCCEEEEESSCCTTCBCBTTCC
T ss_pred             CCceeEcCCCCCCcCCCcEEEEEcccCCC-CCeEEEeeccCCCCCCCeeEec--CCCCCceEEEEECCCCCCCEEeCCce
Confidence            47899999999999999999999999987 679999 999999999999999  889999999999 65 7899999999


Q ss_pred             eEEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCCC------CCCcCCeEEEEcccccchhccccCCCCCeEEEecc
Q 040351          103 IKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEG------KTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCS  176 (232)
Q Consensus       103 lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg~------~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp  176 (232)
                      |||+|...   +.|++|++|+|+++++ +++|||+|||.      ++..|||||||++..           ..|||+|||
T Consensus        79 lnI~F~~~---~~C~~st~W~v~~~~~-~~~~~V~tGg~~~~pg~~t~~~~FkIek~~~~-----------~~YKL~fCp  143 (184)
T 3s8k_A           79 LNVKFNIT---INCNETTAWKVDRFPG-VIGWTVTLGGEKGYHGFESTHSMFKIKKAGLP-----------FSYKFHFCP  143 (184)
T ss_dssp             EEEEESSC---CSSSSCSBCEEEEETT-EEEEEEESCCCCSSSSGGGGGGCBEEEECSST-----------TCEEEEECC
T ss_pred             EEEEeCCC---CCCCCCCeEEEeeeCC-ccceEEEECCcCCCCCcccccceEEEEEcCCC-----------CceEEEEcC
Confidence            99999987   8999999999998777 88999999993      267899999999842           469999999


Q ss_pred             CCCCCCCCcccceeeEEe-eCCeeEEEEEcCCCCCCCCeeEEEEEcCC
Q 040351          177 TPVNGSCDTLCKDVGVSN-VDGVQRLVVVDDNDQPNLPLPVVLFPADS  223 (232)
Q Consensus       177 ~~~~~~c~~~C~dVGi~~-d~g~rrL~l~~d~~~~~~pf~V~F~ka~~  223 (232)
                      .+|+ +|+..|+|||+++ ++|+||||| +++     ||.|+|+||++
T Consensus       144 ~~~~-~c~~~C~dvGi~~d~~g~rrL~l-~~~-----p~~V~F~ka~~  184 (184)
T 3s8k_A          144 SYPR-TRLIPCNNVDIFFDKYRIRRLIL-TND-----AKEFVFIKTNR  184 (184)
T ss_dssp             SSCC-CSSSCCEEEEEEECTTCCEEEEE-ESS-----CCCEEEEESCC
T ss_pred             CCCC-CcccccccEeEEECCCCcEEEEe-cCC-----CeEEEEEECCC
Confidence            9987 8999999999998 589999999 875     99999999964


No 3  
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=100.00  E-value=1.9e-60  Score=409.81  Aligned_cols=181  Identities=24%  Similarity=0.430  Sum_probs=141.4

Q ss_pred             HHHHHHHHhcCCCCCCCCCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEE
Q 040351            9 LSFLILALTTKPQLGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVL   88 (232)
Q Consensus         9 lsfll~a~~t~~~l~~a~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~F   88 (232)
                      ++||||||++++ +++|+++||||+|||||++|++|||+|++||.|  |||+|++ +|++||++|+|++++..+|+||+|
T Consensus         7 ~~fLl~a~~~~~-~~~a~~~pVlD~~G~~l~~G~~YyI~p~~~g~G--GGl~l~~-~n~~CPl~Vvq~~~~~~~GlPV~F   82 (200)
T 2qn4_A            7 PLILLSLLAISF-SCSAAPPPVYDTEGHELSADGSYYVLPASPGHG--GGLTMAP-RVLPCPLLVAQETDERRKGFPVRF   82 (200)
T ss_dssp             -----------------CCCBCBCTTSCBCBTTSCEEEEESSTTSC--CCEEEEE-SSSSSSEEEEECSSTTCCBCCEEE
T ss_pred             HHHHHHHHHhcc-ccccCCCceEeCCCCCCcCCCcEEEEeCccCCC--CeEEECC-CCCCCCCeeEECCCCCCCCccEEE
Confidence            569999998864 456788999999999999999999999999997  8999999 999999999999999999999999


Q ss_pred             ec-----CCCCcceecccceEEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCCC-C----CCcCCeEEEEcccccc
Q 040351           89 LP-----NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEG-K----TCQNLFKLEKVSASIF  158 (232)
Q Consensus        89 sp-----~~~~~vI~e~t~lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg~-~----~~~~~FkIeK~~~~~~  158 (232)
                      +|     ..++++|||+|+|||+|...   +.|++|++|+|++ |+++++|||+|||. +    +.+|||||||++    
T Consensus        83 s~~~~~~~~~~~vIrest~lnI~F~~~---~~C~~st~WkV~~-~~~~~~~~V~tGg~~g~~~~~~~~~FkIeK~~----  154 (200)
T 2qn4_A           83 TPWGGAAAPEDRTIRVSTDVRIRFNAA---TICVQSTEWHVGD-EPLTGARRVVTGPLIGPSPSGRENAFRVEKYG----  154 (200)
T ss_dssp             EETTGGGSCSCCBCBTTSCEEEEECSC---CTTCSCCBCEEC--------CBEECSCC------CCTTCEEEEEET----
T ss_pred             EECCcCCCCCCCEEecCccEEEEECCC---CcCCCCCEEEEec-cCcccceEEEECCcCCCCccccCCeEEEEECC----
Confidence            99     45788999999999999755   7999999999985 78889999999993 2    679999999998    


Q ss_pred             hhccccCCCCCeEEEeccCCCCCCCCcccceeeEEeeCCeeEEEEEcCCCCCCCCeeEEEEEcCCC
Q 040351          159 DMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGVSNVDGVQRLVVVDDNDQPNLPLPVVLFPADSG  224 (232)
Q Consensus       159 ~~~~~~~~~~~YKLvfCp~~~~~~c~~~C~dVGi~~d~g~rrL~l~~d~~~~~~pf~V~F~ka~~~  224 (232)
                               .+|||+||.        ..|+|||+++| |+|||+| +|+    +||.|+|+|++++
T Consensus       155 ---------~~YKL~~C~--------~~C~dvGi~~d-g~rrL~l-~~~----~p~~V~F~k~~~~  197 (200)
T 2qn4_A          155 ---------GGYKLVSCR--------DSCQDLGVSRD-GARAWLG-ASQ----PPHVVVFKKARPS  197 (200)
T ss_dssp             ---------TEEEEEECS--------SSCEEEEEEEE-TTEEEEE-ECS----SCCCEEEEEC---
T ss_pred             ---------CceeEEEEc--------CccceeeEEcC-CeEEEEe-cCC----CceEEEEEECCcC
Confidence                     349999991        14999999988 9999999 664    3999999999654


No 4  
>3tc2_A Kunitz-type proteinase inhibitor P1H5; beta-trefoil fold, protease inhibitor, hydrolase inhibitor; 1.60A {Solanum tuberosum}
Probab=100.00  E-value=3.3e-60  Score=404.51  Aligned_cols=179  Identities=26%  Similarity=0.495  Sum_probs=152.4

Q ss_pred             CCCCCCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCC--CCCCCCceEEcCCCC-CCCceEEEecC--CCCcc
Q 040351           22 LGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK--NGQCPTDVIQLSPKD-KRGKNLVLLPN--DNSII   96 (232)
Q Consensus        22 l~~a~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~--n~~CPl~VvQ~~~~~-~~GlPV~Fsp~--~~~~v   96 (232)
                      ||+++ ++|+|++||||++|++|||+|++||.| |||++|++++  |++||++|+|++++. .+|+||+|++.  ....+
T Consensus         1 lps~~-~~VlD~~G~~l~~g~~YyI~p~~~g~g-GGgl~l~~~~~~~~~CPl~VvQ~~~~~~~~GlPV~Fs~~~~p~~~~   78 (187)
T 3tc2_A            1 LPSDA-TPVLDVTGKELDPRLSYRIISTFWGAL-GGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQG   78 (187)
T ss_dssp             -CCCC-CBCBCTTSCBCCTTSCEEEECSCCGGG-CCCEEEECCTTCCCSSCCEEEECSSSSSCCCCCEEEEECSSCCCSS
T ss_pred             CCCCC-ceeEcCCCCCCcCCCCEEEEEcccCCC-CCeEEEeecCCCCCCCCCccEeCCCccCCCCeeEEEEecCCCcCCe
Confidence            45555 999999999999999999999999987 6789999865  478999999999997 89999999943  23489


Q ss_pred             eecccceEEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCCCC--CCcCCeEEEEcccccchhccccCCCCCeEEEe
Q 040351           97 VRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK--TCQNLFKLEKVSASIFDMKIALDIPCLYKIVH  174 (232)
Q Consensus        97 I~e~t~lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg~~--~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvf  174 (232)
                      |||+|+|||+|... ..+.|++|++|+|+++|+++++|||+|||..  ..+|||||||++.            ++|||+|
T Consensus        79 I~e~t~lnI~F~~~-~~~~C~~st~W~v~~~~~~~~~~~v~tgg~~g~~~~~~FkIek~~~------------~~YKLv~  145 (187)
T 3tc2_A           79 IFEDELLNIQFAIS-TSKMCVSYTIWKVGDYDASLGTMLLETGGTIGQADSSWFKIVKSSQ------------FGYNLLY  145 (187)
T ss_dssp             CBTTCCEEEEECCC-CCGGGGGGGBEEEEEEETTTTEEEEEECCCSSSTTSCCEEEEECSS------------SSEEEEE
T ss_pred             ecCCCeEEEEECCC-CCCCCCCCCEEEEeccCccccceEEEeCCccCCCccceEEEEecCC------------CCEEEEE
Confidence            99999999999875 2368999999999988888899999999943  3588999999973            6799999


Q ss_pred             ccCCCCCCCCcccceeeEEeeCCeeEEEEEcCCCCCCCCeeEEEEEc
Q 040351          175 CSTPVNGSCDTLCKDVGVSNVDGVQRLVVVDDNDQPNLPLPVVLFPA  221 (232)
Q Consensus       175 Cp~~~~~~c~~~C~dVGi~~d~g~rrL~l~~d~~~~~~pf~V~F~ka  221 (232)
                      ||..|. +|...|+|||+++++|+||||| +++    +||.|+|||+
T Consensus       146 Cp~~~~-~~~~~C~diGi~~~~G~rrL~l-~~~----~p~~V~F~K~  186 (187)
T 3tc2_A          146 CPVTTS-SDDQFCLKVGVVHQNGKRRLAL-VKD----NPLDVSFKQV  186 (187)
T ss_dssp             CCC------CCSSEEEEEEEETTEEEEEE-ESS----CCCCBEEEEC
T ss_pred             cCCccc-CCCCccCceEEEecCCcEEEEE-CCC----CCcEEEEEEC
Confidence            998654 5889999999998999999999 764    3999999997


No 5  
>1tie_A Erythrina trypsin inhibitor; proteinase inhibitor (trypsin); 2.50A {Erythrina caffra} SCOP: b.42.4.1
Probab=100.00  E-value=8.5e-59  Score=391.28  Aligned_cols=169  Identities=26%  Similarity=0.503  Sum_probs=149.4

Q ss_pred             ceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceEEEEe
Q 040351           29 PILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIKLKFS  108 (232)
Q Consensus        29 ~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~lnI~F~  108 (232)
                      .|||+|||||++|.+|||+|++||.|  |||+|++++|++||++|+|++++..+|+||+|+|++++++|||+|+|||+|.
T Consensus         1 ~VlD~~G~~l~~G~~YyI~p~~~g~G--GGl~l~~~~n~~CPl~Vvq~~~~~~~GlPV~Fs~~~~~~vI~est~lnI~F~   78 (172)
T 1tie_A            1 VLLDGNGEVVQNGGTYYLLPQVWAQG--GGVQLAKTGEETCPLTVVQSPNELSDGKPIRIESRLRSAFIPDDDKVRIGFA   78 (172)
T ss_dssp             CCBCTTSCBCCTTCEEEEEESSGGGC--CCEEEECCTTCSSCCEEEECSCTTCCCSCEEEEESSCCSSCCTTCCEEEEES
T ss_pred             CeEeCCCCCCcCCCCEEEeECccCCC--CeEEEeCCCCCCCCCccEECCCCCCCCceEEEEEcCCCCEEecCccEEEEEC
Confidence            58999999999999999999999997  8999999999999999999999999999999999878899999999999997


Q ss_pred             cCCCCCCcCCCCcEEEecCCCcCcceEEEeCC-CCCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCCCCCccc
Q 040351          109 RVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLC  187 (232)
Q Consensus       109 ~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg-~~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~~c~~~C  187 (232)
                      ..   +.|++|++|+|++ |+++++|||+||| .++.+|||||||++..          .+.|||+|||     +|+..|
T Consensus        79 ~~---~~C~~st~W~v~~-d~~~~~~~v~tGg~~g~~~~~FkIek~~~~----------~~~YKL~~Cp-----~c~~~C  139 (172)
T 1tie_A           79 YA---PKCAPSPWWTVVE-DEQEGLSVKLSEDESTQFDYPFKFEQVSDQ----------LHSYKLLYCE-----GKHEKC  139 (172)
T ss_dssp             SC---CTTCSCSBEEEEC-----CCEEEECSSSGGGGCCCEEEEEEETT----------TTEEEEEEEC-----STTTCE
T ss_pred             CC---CCCCCCCEEEEcc-cCccccEEEEeCCccCCCCceEEEEECCCC----------CccEEEEEeC-----CCCCcc
Confidence            65   7999999999997 8999999999999 4577899999999842          1469999999     367789


Q ss_pred             ceeeEEee-CCeeEEEEEcCCCCCCCCeeEEEEEcCC
Q 040351          188 KDVGVSNV-DGVQRLVVVDDNDQPNLPLPVVLFPADS  223 (232)
Q Consensus       188 ~dVGi~~d-~g~rrL~l~~d~~~~~~pf~V~F~ka~~  223 (232)
                      .|||+++| +|+|||+| +|+    +||.|+|+|+++
T Consensus       140 ~dvGi~~d~~g~rrL~l-~~~----~p~~V~F~k~~~  171 (172)
T 1tie_A          140 ASIGINRDQKGYRRLVV-TED----YPLTVVLKKDES  171 (172)
T ss_dssp             EEEEEEECTTSCEEEEE-CSS----SBCEEEEEECC-
T ss_pred             ccceEEECCCCeEEEEe-cCC----CcEEEEEEECcc
Confidence            99999987 68899999 765    399999999975


No 6  
>1r8n_A STI, kunitz trypsin inhibitor; kunitz-type trypsin/kallikrein inhibitor, beta-trefoil fold, flamboyant, hydrolase inhibitor; 1.75A {Delonix regia} SCOP: b.42.4.1
Probab=100.00  E-value=1.1e-58  Score=394.71  Aligned_cols=176  Identities=24%  Similarity=0.471  Sum_probs=158.4

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCC-CCCceEEcCCCCCCCceEEEecCC-CCcceecccce
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQ-CPTDVIQLSPKDKRGKNLVLLPND-NSIIVRESTNI  103 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~-CPl~VvQ~~~~~~~GlPV~Fsp~~-~~~vI~e~t~l  103 (232)
                      ++++|||++||||++|.+|||+|++||.|  |||+|++++|++ ||++|+|++++..+|+||+|+|++ ++++|||+|+|
T Consensus         2 ~~~~VlD~~G~~l~~G~~YyI~p~~~g~g--GGl~l~~~~n~~~CPl~Vvq~~~~~~~GlPV~Fs~~~~~~~vI~est~l   79 (185)
T 1r8n_A            2 DAEKVYDIEGYPVFLGSEYYIVSAIIGAG--GGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEEKQGKIYTDTEL   79 (185)
T ss_dssp             CSCBCBCTTSCBCBTTSEEEEEECTTSSS--CCBEEEECCTTCSSCCEEEECSSTTCCBCCEEEECSSCSSSBCBTTSCB
T ss_pred             CCceeEeCCCCCCcCCCCEEEEECccCCC--ceEEEecCCCCCCCCCeeEECCCCCCCCccEEEEeCCCCCCEEecCccE
Confidence            46899999999999999999999999997  899999999999 999999999999999999999987 78999999999


Q ss_pred             EEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCC-C--CCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCC
Q 040351          104 KLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-G--KTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVN  180 (232)
Q Consensus       104 nI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg-~--~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~  180 (232)
                      ||+|...   +.|++|++|+|+++|+++++|||++|| .  ++.+|||||||++.            ++|||+|||.. +
T Consensus        80 nI~F~~~---~~C~~st~WkV~~~d~~~~~~~V~~gg~~g~~t~~~~FkIek~~~------------~~YKLv~CP~~-~  143 (185)
T 1r8n_A           80 EIEFVEK---PDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGFFKIEKLGS------------LAYKLVFCPKS-D  143 (185)
T ss_dssp             EEEESSC---CTTSSCCBEEEECSSSSCEEEECCTTTSCGGGBCCEEEEEEECSS------------SCEEEEEEESS-S
T ss_pred             EEEeCCC---CCCCCCCEEEEeeeCcccccEEEEeCCccCCcccCceEEEEECCC------------CCeeEEECCCC-C
Confidence            9999865   799999999998789999999999999 3  36789999999963            57999999974 2


Q ss_pred             CCCCcccceeeEEeeCCeeEEEEE-cCCCCCCCCeeEEEEEcCCCCCc
Q 040351          181 GSCDTLCKDVGVSNVDGVQRLVVV-DDNDQPNLPLPVVLFPADSGRSM  227 (232)
Q Consensus       181 ~~c~~~C~dVGi~~d~g~rrL~l~-~d~~~~~~pf~V~F~ka~~~~~~  227 (232)
                         ...|+|||+++|+| |||||+ +|+    +||.|+|+||++++.+
T Consensus       144 ---~~~C~dvGi~~d~g-rrLal~~~d~----~p~~V~F~k~~~~~~~  183 (185)
T 1r8n_A          144 ---SGSCSDIGINYEGR-RSLVLKSSDD----VPFRVVFVKPRSGSET  183 (185)
T ss_dssp             ---TTCCEEEEEECSSS-CEEEECSSSS----CCCCEEEECCCCSSCC
T ss_pred             ---CCccceeeeEeCCc-cEEEEecCCC----CEEEEEEEECCCCccc
Confidence               45799999998889 999994 332    3999999999888765


No 7  
>1eyl_A RWCI-3, chymotrypsin inhibitor; beta trefoil, hydrolase inhibitor; HET: SO4; 1.90A {Psophocarpus tetragonolobus} SCOP: b.42.4.1 PDB: 1fn0_A* 2beb_A 2esu_A 1fmz_A* 2bea_A 2et2_A 4wbc_A* 1wbc_A 2wbc_A* 1xg6_A 2qyi_B 3i29_B 3i2x_A 3i2a_A 3qyd_A
Probab=100.00  E-value=2.1e-58  Score=393.20  Aligned_cols=176  Identities=27%  Similarity=0.493  Sum_probs=155.7

Q ss_pred             CCCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceE
Q 040351           25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIK  104 (232)
Q Consensus        25 a~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~ln  104 (232)
                      |++++|||+|||||++|.+|||+|++||.|  |||+|++++|++||++|+|++++..+|+||+|+|+.++++|||+|+||
T Consensus         2 a~~~~VlD~~G~~l~~G~~YYI~p~~~g~G--GGl~l~~~~n~~CPl~Vvq~~~~~~~GlPV~Fs~~~~~~vI~est~ln   79 (186)
T 1eyl_A            2 EFDDDLVDAEGNLVENGGTYYLLPHIWAHG--GGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQFLSLFIPRGSLVA   79 (186)
T ss_dssp             CCCCBCBCTTSSBCBTTCEEEEEESSGGGC--CCEEEECCTTCSSCCEEEECSCTTCCCCCEEEEESSCCSBCBTTSCEE
T ss_pred             CCCCeeEeCCCCCCcCCCCEEEeecccCCC--CeEEEeCCCCCCCCCccEECCCCCCCCceEEEEecCCCCEEecCccEE
Confidence            677999999999999999999999999997  899999999999999999999999999999999987889999999999


Q ss_pred             EEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCC--C-CCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCC
Q 040351          105 LKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE--G-KTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNG  181 (232)
Q Consensus       105 I~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg--~-~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~  181 (232)
                      |+|...   +.|++|++|+|++++++   |||+|||  . ++..|||||||++...         .+.|||+|||. |  
T Consensus        80 I~F~~~---~~C~~st~WkV~~~~~~---~~V~tGG~~~~g~~~~~FkIek~~~~~---------~~~YKLv~Cp~-~--  141 (186)
T 1eyl_A           80 LGFANP---PSCAASPWWTVVDSPQG---PAVKLSQQKLPEKDILVFKFEKVSHSN---------IHVYKLLYCQH-D--  141 (186)
T ss_dssp             EEESSC---CTTSSSSBCEEECCTTC---CEEECCSSCCCGGGTSCEEEEECSSCS---------SCCEEEEEEEE-C--
T ss_pred             EEeCCC---CCCCCCCEEEEeccCCc---eEEEECCccccCCCCCeEEEEEcCCCC---------ccceEEEEcCC-c--
Confidence            999865   79999999999976654   8999999  3 3678999999998410         14599999997 3  


Q ss_pred             CCCccc-ceeeEEee-CCeeEEEEEcCCCCCCCCeeEEEEEcCCCC
Q 040351          182 SCDTLC-KDVGVSNV-DGVQRLVVVDDNDQPNLPLPVVLFPADSGR  225 (232)
Q Consensus       182 ~c~~~C-~dVGi~~d-~g~rrL~l~~d~~~~~~pf~V~F~ka~~~~  225 (232)
                      +|+..| +|||+++| +|+|||+| +|+    +||.|+|+|++++.
T Consensus       142 ~c~~~C~~dvGi~~d~~g~rrL~l-~d~----~p~~V~F~k~~~~~  182 (186)
T 1eyl_A          142 EEDVKCDQYIGIHRDRNGNRRLVV-TEE----NPLELVLLKAKSET  182 (186)
T ss_dssp             SSSEEEEEEEEEEECTTCCEEEEE-ESS----CBCEEEEEECCC--
T ss_pred             cCCCcccCccceEECCCCceEEEe-cCC----CCceEEEEEcCccc
Confidence            588899 99999987 78999999 664    39999999997654


No 8  
>4an6_A Trypsin inhibitor; kunitz type inhibitor, factor XA inhibitor, hydrolase inhibi; 1.94A {Tamarindus indica} PDB: 4an7_B
Probab=100.00  E-value=1.4e-58  Score=393.78  Aligned_cols=174  Identities=22%  Similarity=0.373  Sum_probs=148.2

Q ss_pred             CceecCCCCc-ccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceEEE
Q 040351           28 EPILDVYGNQ-VDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIKLK  106 (232)
Q Consensus        28 ~~VlDtdG~~-L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~lnI~  106 (232)
                      .+|+|++||| |++|++|||+|++||.|  |||+|++++|++|||+|+|++++..+|+||+|+|..+.++|||+|+|||+
T Consensus         2 ~~VlDt~G~pvl~~g~~YYIlP~~~g~G--GGl~l~~~~n~~CPl~VvQ~~~~~~~GlPV~Fs~~~~~~~I~~stdlnI~   79 (185)
T 4an6_A            2 YTVHDTDGKPVLNNAGQYYILPAKQGKG--GGLGLSNDDDGNCPLTVSQTPIDLPIGLPVRFSSRARISHITTALSLNIE   79 (185)
T ss_dssp             CBCBCTTSCBCBSSSSEEEEEESSCCSE--EEEEEECSSCTTSCCEEEEEETTSCCCCCEEEECSSSSSBCBTTCCBEEE
T ss_pred             CeeEcCCCCEeecCCCCEEEEECccCCC--CcEEEeCCCCCCCCceEEECcCCCCCCEEEEEEcCCCCCEeECCccEEEE
Confidence            5899999999 68999999999999987  99999999999999999999999999999999997788999999999999


Q ss_pred             EecCCCCCCcC-CCCcEEEecCCCcCcceEEEeCC-CCCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCCCCC
Q 040351          107 FSRVSSLQQCN-KDSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCD  184 (232)
Q Consensus       107 F~~~~~~~~C~-~st~W~V~~~d~~~g~~~V~tGg-~~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~~c~  184 (232)
                      |...   +.|+ +|++|+|++.+...+.+++++|+ ..+..|||||||++             ++|||+|||. |+ +|+
T Consensus        80 F~~~---~~C~~~st~W~v~~~~~~~~~~~~~~g~~~~~~~~~FkIek~~-------------~~YKLvfCp~-~~-~~~  141 (185)
T 4an6_A           80 FTIA---PACAPKPARWRIFNEQSSEKGYTPVKISDDFSSAAPFQIKKFE-------------EDYKLVYCSK-SE-SGE  141 (185)
T ss_dssp             ESSC---CTTSCSSEEEEECCSSCSCCTTCBEEEECCBCSCCCEEEEEET-------------TEEEEEEEEE-CT-TCC
T ss_pred             ecCC---CcCCCCCceeEEeccCCCceEEEEEeCCCCCCCccCEEEEEeC-------------CceEEEECcC-CC-CCC
Confidence            9887   7887 78899998766665565444333 45678999999998             5699999994 55 689


Q ss_pred             cccceeeEEee-CCeeEEEEEcCCCCCCCCeeEEEEEcCCCCC
Q 040351          185 TLCKDVGVSNV-DGVQRLVVVDDNDQPNLPLPVVLFPADSGRS  226 (232)
Q Consensus       185 ~~C~dVGi~~d-~g~rrL~l~~d~~~~~~pf~V~F~ka~~~~~  226 (232)
                      ..|+||||++| +|+|||+| +|+    +||.|+||||+.+++
T Consensus       142 ~~C~diGi~~d~~g~rrL~l-sd~----~p~~V~F~k~~~~s~  179 (185)
T 4an6_A          142 RKCVDLGIKIDDEKNRRLVL-KEG----DPFKVKFKKVDEESS  179 (185)
T ss_dssp             EEEEEEEEECC---CCEEEE-CTT----CCCCEEEEEEEC---
T ss_pred             cCcCcceEEECCCCeEEEEE-CCC----CCEEEEEEECCCCcc
Confidence            99999999975 69999999 765    399999999987654


No 9  
>2gzb_A Kunitz-type proteinase inhibitor BBCI; cruzipain, cysteine proteinase inhibitor, hydrolase; 1.70A {Bauhinia bauhinioides} PDB: 2go2_A
Probab=100.00  E-value=2.9e-57  Score=380.05  Aligned_cols=163  Identities=23%  Similarity=0.321  Sum_probs=149.8

Q ss_pred             CCceecCCCCcccC-CCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceEE
Q 040351           27 SEPILDVYGNQVDS-SHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIKL  105 (232)
Q Consensus        27 ~~~VlDtdG~~L~~-G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~lnI  105 (232)
                      ++||||++||||++ |.+|||+|++||.   |||+|++++|++||++|+|++ +..+|+||+|+|++++++|||+|+|||
T Consensus         2 ~~~VlD~~G~~l~~~g~~YyI~p~~~g~---GGl~l~~~~n~~CPl~Vvq~~-~~~~GlPV~Fs~~~~~~vI~est~lnI   77 (166)
T 2gzb_A            2 MSVILDTKGEPVSNAADAYYLVPVSHGE---GGLALAKVGNEAEPKAVVLDP-HHRPGLTVRFETPLAIAIITESFFLNI   77 (166)
T ss_dssp             CCBCBCTTSCBCBBSCSCEEEEESSSCC---SEEEEECCTTCSSCCEEEEET-TSSSCBEEEEECSBSCSBCBTTSCBEE
T ss_pred             CceeEeCCCCEeecCCCCEEEEeCccCC---CcEEEeCCCCCCCCCeeEeCC-CCCCCccEEEEEcCCCCEEecCceEEE
Confidence            47999999999999 9999999999997   589999999999999999999 999999999999878899999999999


Q ss_pred             EEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCCCCCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCCCCCc
Q 040351          106 KFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDT  185 (232)
Q Consensus       106 ~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg~~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~~c~~  185 (232)
                      +|..     .|++|++|+|++ |+++++|||+||| ++..|||||||++             .+|||+|||..    | .
T Consensus        78 ~F~~-----~C~~st~WkV~~-d~~~~~~~v~tgg-~~~~~~FkIek~~-------------~~YKL~~Cp~~----~-~  132 (166)
T 2gzb_A           78 KFVP-----SSSDSEVWDVSK-QYPIGLAVKVTDT-KSFVGPFRVEKEG-------------EGYKIVYYPDR----G-Q  132 (166)
T ss_dssp             EEES-----CSSTTCEEEEEE-ETTTEEEEEEESC-CCSSCSEEEEEET-------------TEEEEEECSST----T-S
T ss_pred             EEcc-----CCCCCCEEEEcc-cCccccEEEEcCC-CCcCceEEEEECC-------------CceeEEEECCC----C-C
Confidence            9985     699999999997 8889999999999 7889999999998             46999999973    3 5


Q ss_pred             ccceeeEEeeCCeeEEEEEcCCCCCCCCeeEEEEEcCC
Q 040351          186 LCKDVGVSNVDGVQRLVVVDDNDQPNLPLPVVLFPADS  223 (232)
Q Consensus       186 ~C~dVGi~~d~g~rrL~l~~d~~~~~~pf~V~F~ka~~  223 (232)
                      .|+|||+++|+|+|||+| +++    +||.|+|+||++
T Consensus       133 ~C~dvGi~~d~g~rrL~l-~~~----~p~~V~F~k~~~  165 (166)
T 2gzb_A          133 TGLDIGLVHRNDKYYLAA-TEG----EPFVFKIRKATY  165 (166)
T ss_dssp             CCEEEEEEEETTEEEEEE-ESS----CCCCEEEEECC-
T ss_pred             ccceeeEEecCCcEEEEe-CCC----CcEEEEEEECCC
Confidence            799999999999999999 764    399999999975


No 10 
>3bx1_D BASI, alpha-amylase/subtilisin inhibitor; complex (proteinase/inhibitor) enzyme inhibition, savinase, barley alpha-amylase/subtilisin inhibitor; 1.85A {Hordeum vulgare} SCOP: b.42.4.1 PDB: 1ava_C 2iwt_B*
Probab=100.00  E-value=1.9e-57  Score=385.83  Aligned_cols=171  Identities=25%  Similarity=0.452  Sum_probs=151.6

Q ss_pred             CCCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCC---CCcceeccc
Q 040351           25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPND---NSIIVREST  101 (232)
Q Consensus        25 a~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~---~~~vI~e~t  101 (232)
                      |+++||||+|||||++|.+|||+|++||.|  |||+|++++|++||++|+|++++..+|+||+|+|.+   ++++|||+|
T Consensus         1 a~~~pVlD~~G~~l~~G~~YyI~p~~~g~G--GGl~l~~~~n~~CPl~Vvq~~~~~~~GlPV~Fs~~~~~~~~~vI~est   78 (181)
T 3bx1_D            1 ADPPPVHDTDGHELRADANYYVLSANRAHG--GGLTMAPGHGRHCPLFVSQDPNGQHDGFPVRITPYGVAPSDKIIRLST   78 (181)
T ss_dssp             CCCCBCBCTTSCBCBTTSCEEEEESSGGGC--CCEEEEECSSSSCSEEEEECSCTTCCCCEEEEEESSCCCSCCBCBTTC
T ss_pred             CCCCeeEeCCCCCCcCCCCEEEEecccCCC--CeEEEeCCCCCCCCCeeEECCCCCCCCccEEEEeCCcCCCCCEEecCc
Confidence            567999999999999999999999999987  899999999999999999999999999999999974   688999999


Q ss_pred             ceEEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCCC-C----CCcCCeEEEEcccccchhccccCCCCCeEEEecc
Q 040351          102 NIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEG-K----TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCS  176 (232)
Q Consensus       102 ~lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg~-~----~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp  176 (232)
                      +|||+|...   +.|++|++|+|++ |.++++|||+|||. +    +..|||||||++..         ..+.|||+|| 
T Consensus        79 ~lnI~F~~~---~~C~~st~WkV~~-d~~~~~~~V~tGg~~g~~~~~~~~~FkIek~~~~---------~~~~YKL~~C-  144 (181)
T 3bx1_D           79 DVRISFRAY---TTCLQSTEWHIDS-ELAAGRRHVITGPVKDPSPSGRENAFRIEKYSGA---------EVHEYKLMSC-  144 (181)
T ss_dssp             CEEEEECCE---ETTCSCCBCEECC-TTSSBCCBEECSCCSSCCTTCCTTCEEEEECTTS---------CTTCEEEEEE-
T ss_pred             cEEEEeCCC---CcCCCCCEEEEec-cCccccEEEEECCcCCCCccccCceEEEEEcCCC---------CcCceEEEEE-
Confidence            999999754   7999999999985 88899999999993 2    57999999999842         0136999999 


Q ss_pred             CCCCCCCCcccceeeEEee-CCeeEEEEEcCCCCCCCCeeEEEEEcCC
Q 040351          177 TPVNGSCDTLCKDVGVSNV-DGVQRLVVVDDNDQPNLPLPVVLFPADS  223 (232)
Q Consensus       177 ~~~~~~c~~~C~dVGi~~d-~g~rrL~l~~d~~~~~~pf~V~F~ka~~  223 (232)
                      .       ..|+|||+++| +|+|||+| +++    +||.|+|+|++.
T Consensus       145 ~-------~~C~dvGi~~d~~g~rrL~l-~~~----~p~~V~F~k~~~  180 (181)
T 3bx1_D          145 G-------DWCQDLGVFRDLKGGAWFLG-ATE----PYHVVVFKKAPP  180 (181)
T ss_dssp             S-------SSEEECEEECCSSSSCEEEE-SEE----SBCEEEEEECCC
T ss_pred             C-------CccCcceEEECCCCcEEEEe-cCC----CceEEEEEECCC
Confidence            2       25999999985 79999999 764    399999999964


No 11 
>1avw_B STI, trypsin inhibitor; complex (proteinase/inhibitor), porcine trypsin, soybean trypsin inhibitor, kunitz-type, beta-trefoil fold; 1.75A {Glycine max} SCOP: b.42.4.1 PDB: 1avx_B 1avu_A 1ba7_A
Probab=100.00  E-value=9e-57  Score=380.46  Aligned_cols=173  Identities=30%  Similarity=0.479  Sum_probs=148.2

Q ss_pred             CceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceEEEE
Q 040351           28 EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIKLKF  107 (232)
Q Consensus        28 ~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~lnI~F  107 (232)
                      +||||++||||++|.+|||+|++||.   |||+|++++|++||++|+|++++..+|+||+|+|+.++++|||+|+|||+|
T Consensus         1 ~~VlD~~G~~l~~G~~YyI~p~~~g~---GGl~l~~~~n~~CPl~Vvq~~~~~~~GlPV~Fs~~~~~~vI~est~lnI~F   77 (177)
T 1avw_B            1 DFVLDNEGNPLENGGTYYILSDITAF---GGIRAAPTGNERCPLTVVQSRNELDKGIGTIISSPYRIRFIAEGHPLSLKF   77 (177)
T ss_dssp             CBCBCTTSCBCBTTEEEEEEESSTTC---CCEEEECCTTCSSCCEEEECSCTTCCCCCEEEECSBCCSBCBTTCCBEEEE
T ss_pred             CccCcCCCCCCcCCCcEEEEeCccCC---CcEEEeCCCCCCCCCccEECCCCCCCCceEEEEecCCCCEEecCccEEEEE
Confidence            58999999999999999999999997   699999999999999999999999999999999987789999999999999


Q ss_pred             ecC-CCCCCcCCCCcEEEecCCCcCcceEEEeCC-CCCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCCCCCc
Q 040351          108 SRV-SSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDT  185 (232)
Q Consensus       108 ~~~-~~~~~C~~st~W~V~~~d~~~g~~~V~tGg-~~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~~c~~  185 (232)
                      ... ..++.|++|++|+|++++++  +|||+||| .++.+|||||||++..         ..+.|||+|||..   +|+.
T Consensus        78 ~~~~~~~~~C~~st~WkV~~~~~~--~~~V~tGg~~g~~~~~FkIek~~~~---------~~~~YKL~~Cp~~---~c~~  143 (177)
T 1avw_B           78 DSFAVIMLCVGIPTEWSVVEDLPE--GPAVKIGENKDAMDGWFRLERVSDD---------EFNNYKLVFCPQQ---AEDD  143 (177)
T ss_dssp             CCCCCCGGGTTCCCBCEEECSCTT--SSEEECSCCTTBCCEEEEEEECC-----------CCCCEEEEEEEC-------C
T ss_pred             ccCCCcCCcCCCCCEEEEeccCCc--ceEEEeCCcCCCCCceEEEEEcCCC---------CcCceEEEEcCCc---CCCC
Confidence            753 01258999999999975544  89999999 4578999999999842         0145999999973   5788


Q ss_pred             ccceeeEEee--CCeeEEEEEcCCCCCCCCeeEEEEEcC
Q 040351          186 LCKDVGVSNV--DGVQRLVVVDDNDQPNLPLPVVLFPAD  222 (232)
Q Consensus       186 ~C~dVGi~~d--~g~rrL~l~~d~~~~~~pf~V~F~ka~  222 (232)
                      .|+|||+++|  +|+|||+| +++    +||.|+|+||+
T Consensus       144 ~C~dvGi~~d~~~g~rrL~l-~~~----~p~~V~F~k~~  177 (177)
T 1avw_B          144 KCGDIGISIDHDDGTRRLVV-SKN----KPLVVQFQKLD  177 (177)
T ss_dssp             CCEEEEEEECTTTCCEEEEE-CTT----CCCEEEEEECC
T ss_pred             ccccceEEecCCCCeEEEEe-cCC----CceEEEEEECC
Confidence            9999999987  79999999 765    39999999985


No 12 
>2dre_A Water-soluble chlorophyll protein; beta-trefoil, tetramer, plant, singlet oxygen, photooxidation, chlorophyll carrier; HET: CLA; 2.00A {Lepidium virginicum}
Probab=100.00  E-value=7.6e-56  Score=375.74  Aligned_cols=171  Identities=26%  Similarity=0.437  Sum_probs=145.2

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCCCCCce-EEecCCCCCCCCceEEcCCCCCCCceEEEecCC-C-Ccceecccc
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGI-SADKGKNGQCPTDVIQLSPKDKRGKNLVLLPND-N-SIIVRESTN  102 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl-~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~-~-~~vI~e~t~  102 (232)
                      ++++|||++||||++|.+|||+|++||.|  ||+ .+++++|++||++|+|++++..+|+||+|+|.+ + +++|||+|+
T Consensus         3 ~~~~VlD~~G~~l~~G~~YyI~p~~~g~g--GGl~~~~~~~n~~CPl~VvQ~~~~~~~GlPV~Fs~~~~~~~~vI~est~   80 (180)
T 2dre_A            3 DEEPVKDTNGNPLKIETRYFIQPASDNNG--GGLVPANVDLSHLCPLGIVRTSLPYQPGLPVTISTPSSSEGNDVLTNTN   80 (180)
T ss_dssp             CCCBCBCTTSCBCBTTCCEEEEESSCSSS--CCEEEECSSSSCSSSCEEEECSSTTCCCCCEEEECTTCCSSSBCBTTSC
T ss_pred             CCCeeEeCCCCCCcCCCCEEEEeCccCCC--CceEEeccCCCCCCCCeeEECCCCCCCCccEEEEeCCCCCCCEEecCce
Confidence            56899999999999999999999999997  666 688899999999999999999999999999976 4 789999999


Q ss_pred             eEEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCC-CCCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCC
Q 040351          103 IKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNG  181 (232)
Q Consensus       103 lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg-~~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~  181 (232)
                      |||+|....  +.|++|++|+|+  +++.+ |||+||| .+..+|||||||++..          .+.|||+|||.  + 
T Consensus        81 lnI~F~~~~--~~C~~st~WkV~--~~s~~-~~V~tGG~~g~~~~~FkIek~~~~----------~~~YKLv~Cp~--~-  142 (180)
T 2dre_A           81 IAITFDAPI--WLCPSSKTWTVD--SSSEE-KYIITGGDPKSGESFFRIEKYGNG----------KNTYKLVRYDN--G-  142 (180)
T ss_dssp             BEEEECCSC--CSSSSCSBCEEC--SSSTT-CBEESCCCTTSGGGCBEEEECSSS----------TTCEEEEEESS--S-
T ss_pred             EEEEEcCCC--CCCCCCCEEEEe--cCCCc-eEEEECCcCCCCCCcEEEEEccCC----------CCceEEEEcCC--C-
Confidence            999998761  389999999998  56656 9999999 4456899999997531          14799999993  3 


Q ss_pred             CCCcccceeeEEee-CCeeEEEEEcCC-CCCCCCeeEEEEEcC
Q 040351          182 SCDTLCKDVGVSNV-DGVQRLVVVDDN-DQPNLPLPVVLFPAD  222 (232)
Q Consensus       182 ~c~~~C~dVGi~~d-~g~rrL~l~~d~-~~~~~pf~V~F~ka~  222 (232)
                          .|+|||++++ +| |||+| +|+ +.+++||.|+|+||+
T Consensus       143 ----~C~dvGi~~d~~g-rrL~l-~d~~~~~~~p~~V~F~k~~  179 (180)
T 2dre_A          143 ----EGKSVGSTKSLWG-PALVL-NDDDDSDENAFPIKFREVD  179 (180)
T ss_dssp             ----SEEEEEEEECSSS-EEEEE-CC------CCCCEEEEECC
T ss_pred             ----CCceeeEEecCCC-cEEEe-cCCCcccccceEEEEEECc
Confidence                4899999987 57 99999 753 112349999999986


No 13 
>1wba_A Winged bean albumin 1; SEED storage protein; 1.80A {Psophocarpus tetragonolobus} SCOP: b.42.4.1
Probab=100.00  E-value=2.5e-55  Score=371.14  Aligned_cols=166  Identities=24%  Similarity=0.431  Sum_probs=146.3

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCC--CCCceEEcCCCCCCCceEEEec----CCCCcceec
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQ--CPTDVIQLSPKDKRGKNLVLLP----NDNSIIVRE   99 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~--CPl~VvQ~~~~~~~GlPV~Fsp----~~~~~vI~e   99 (232)
                      ++++|||+|||||++|.+|||+|  ||.|  |||+|++++|++  ||++|+|++++  +|+||+|+|    ++++++|||
T Consensus         1 ~~~~VlD~~G~~l~~g~~YyI~p--~g~g--GGl~l~~~~n~~~~CPl~Vvq~~~~--~GlPV~Fs~~~~~~~~~~vI~e   74 (175)
T 1wba_A            1 ADDPVYDAEGNKLVNRGKYTIVS--FSDG--AGIDVVATGNENPEDPLSIVKSTRN--IMYATSISSEDKTPPQPRNILE   74 (175)
T ss_dssp             -CCBCBCTTSCBCBTTEEEEEEE--TTTC--CBEEEECCTTCCTTSCCEEEECSSS--CCCEEEEEESCCCSSCCSBCBT
T ss_pred             CCCeeEeCCCCCCcCCCcEEEee--cCCC--CcEEEeecCCCCCCCCCceEECCCC--CCccEEEEECCcCcCCCCEEec
Confidence            46899999999999999999999  8887  899999999999  99999999988  999999999    767899999


Q ss_pred             ccceEEEEecCCCCCCcCCCCcEEEecCCCcCcceEEEeCC-CCCCcCCeEEEEcccccchhccccCCCCCeEEEeccCC
Q 040351          100 STNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTP  178 (232)
Q Consensus       100 ~t~lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V~tGg-~~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~  178 (232)
                      +|+|||+|.     +.|++|++|+| ++|+++++|||+||| .++.+|||||||++..          .+.|||+|||. 
T Consensus        75 st~lnI~F~-----~~C~~st~W~V-~~d~~~~~~~v~tGg~~g~~~~~FkIek~~~~----------~~~YKL~~Cp~-  137 (175)
T 1wba_A           75 NMRLKINFA-----TDPHKGDVWSV-VDFQPDGQQLKLAGRYPNQVKGAFTIQKGSNT----------PRTYKLLFCPV-  137 (175)
T ss_dssp             TCCEEEEEC-----STTSTTCBEEE-EEETTTEEEEEETTSCSCEECEEEEEEECSSS----------TTCEEEEEEET-
T ss_pred             CceEEEEEc-----CCCCCCCEEEE-eccCcccceEEEeCCcCCCCCCeEEEEEcCCC----------CcceEEEECCC-
Confidence            999999998     37999999999 468899999999999 4577899999999842          14699999996 


Q ss_pred             CCCCCCcccceeeEEee-CCeeEEEEEcCCCCCCCCeeEEEEEcCC
Q 040351          179 VNGSCDTLCKDVGVSNV-DGVQRLVVVDDNDQPNLPLPVVLFPADS  223 (232)
Q Consensus       179 ~~~~c~~~C~dVGi~~d-~g~rrL~l~~d~~~~~~pf~V~F~ka~~  223 (232)
                           +..|+|||+++| +|+|||+| +++.   +||.|+|+|++.
T Consensus       138 -----~~~C~dvGi~~d~~g~rrL~l-~~~~---~p~~V~F~k~~~  174 (175)
T 1wba_A          138 -----GSPCKNIGISTDPEGKKRLVV-SYQS---DPLVVKFHRHEP  174 (175)
T ss_dssp             -----TSCCEEEEEEECTTCCEEEEE-ETTS---CCCEEEEEEC--
T ss_pred             -----CCCcceeeEEECCCCcEEEEE-CCCC---ceeEEEEEECCC
Confidence                 236999999987 89999999 7631   399999999964


No 14 
>3e8l_C Serine proteinase inhibitor A; beta-trefoil fold, protease inhibitor, complex, DIG hydrolase, metal-binding, protease, secreted; 2.48A {Sagittaria sagittifolia}
Probab=100.00  E-value=1.9e-55  Score=374.55  Aligned_cols=166  Identities=23%  Similarity=0.371  Sum_probs=150.5

Q ss_pred             CceecCCC-----CcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCC-CCcceeccc
Q 040351           28 EPILDVYG-----NQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPND-NSIIVREST  101 (232)
Q Consensus        28 ~~VlDtdG-----~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~-~~~vI~e~t  101 (232)
                      -||+|.||     |++++|++|||+|++||.|  |||+|++  |++||++|+ ++++..+|+||+|+|.+ ++++|||+|
T Consensus         9 ~~~~~~~~~~~~~~~~~nG~~YYIlPai~g~G--GGl~l~~--n~~CPl~Vv-~~~~~~~GlPV~Fsp~~~~~~vIrest   83 (185)
T 3e8l_C            9 MPVVDSDGDAVQLNLGGNYPLYTIQSAAIGFR--GGLSTLR--KDACKSYVY-EAPETDRGLPVGFSASATSQPVMQLGS   83 (185)
T ss_dssp             -CCBCTTSCBCBCCCSSSCCCEEEEECCTTCC--CBEEEEE--EETTEEEEE-ECCTTCCCCCEEEECCTTCCSBCCTTC
T ss_pred             cceEcCCCCeeeccccCCCCcEEEEEeecCCC--CcEEECC--CCCCCCeee-cCCCCCCCeeEEEEeCCCCCCEEeCCC
Confidence            47888775     6778999999999999987  8999998  899999999 99999999999999986 889999999


Q ss_pred             ceEEEEecCCCCCCcCCCCcEEEecCCCcCcceEE-EeCC---CCCCcCCeEE-EEcccccchhccccCCCCCeEEEecc
Q 040351          102 NIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFI-TIGE---GKTCQNLFKL-EKVSASIFDMKIALDIPCLYKIVHCS  176 (232)
Q Consensus       102 ~lnI~F~~~~~~~~C~~st~W~V~~~d~~~g~~~V-~tGg---~~~~~~~FkI-eK~~~~~~~~~~~~~~~~~YKLvfCp  176 (232)
                      +|||+|...   +.|++||+|+|+++|+++++||| +|||   .++.+||||| ||++.            +.|||+||+
T Consensus        84 dLnI~F~~~---~~C~~St~WkV~~~d~~~g~~~V~~tGG~~g~~t~~~~FKI~eK~~~------------~~YKLvfC~  148 (185)
T 3e8l_C           84 RYKFSFSMP---VPLICDTAWSIGKSETNGGISFQPITAGDYFYLNNFSWFEARSTEET------------GVYKLAACS  148 (185)
T ss_dssp             EEEEEECCE---EETTBCCBEEECCCEECSSCEECBEEECCBGGGCCCCEEEEEECSST------------TCEEEEEES
T ss_pred             cEEEEecCC---CCCCCCCeEEEeccCcccccEEEEccCCCCCCcccCCeEEEEEEcCC------------CCEEEEEEC
Confidence            999999987   88999999999988889999999 9999   3578999999 99984            569999994


Q ss_pred             CCCCCCCCcccceeeEEeeCCeeEEEEEcCCCCCCCCeeEEEEEcC
Q 040351          177 TPVNGSCDTLCKDVGVSNVDGVQRLVVVDDNDQPNLPLPVVLFPAD  222 (232)
Q Consensus       177 ~~~~~~c~~~C~dVGi~~d~g~rrL~l~~d~~~~~~pf~V~F~ka~  222 (232)
                        |+ +|+..|.|||+++|||+|||+| +++     ||.|+|||++
T Consensus       149 --c~-~c~~~C~dVGi~~d~G~rrLal-~~~-----P~~V~F~K~~  185 (185)
T 3e8l_C          149 --CE-FCKIACPEVGSFNVNGRTLLGI-GGE-----HFTVQFQKFD  185 (185)
T ss_dssp             --CS-SBCCCCCBEEEEEETTEEEEEE-SSB-----CCCEEEEECC
T ss_pred             --CC-CCCCccCceEEEEeCCeEEEEe-cCC-----CeEEEEEECC
Confidence              55 7899999999999999999999 764     9999999985


No 15 
>1r8o_A STI, kunitz trypsin inhibitor; kunitz (STI) trypsin inhibitor, beta-trefoil fold, hydrolase inhibitor; 1.83A {Copaifera langsdorffii} SCOP: b.42.4.1
Probab=100.00  E-value=1.7e-35  Score=227.98  Aligned_cols=92  Identities=18%  Similarity=0.450  Sum_probs=87.8

Q ss_pred             ceecCCCCcc-cCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecCCCCcceecccceEEEE
Q 040351           29 PILDVYGNQV-DSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDNSIIVRESTNIKLKF  107 (232)
Q Consensus        29 ~VlDtdG~~L-~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~~~~~vI~e~t~lnI~F  107 (232)
                      +|+|++|||| ++|.+|||+|++||.|  |||+|++++|++||++|+|++++..+|+||+|+|..++.+|||+++|||+|
T Consensus         1 ~VlD~~G~~l~~~G~~YyI~p~~~g~G--GGl~l~~~~n~~CPl~Vvq~~~~~~~GlPV~Fs~~~~~~vI~est~lnI~F   78 (96)
T 1r8o_A            1 RLVDTDGKPIENDGAEYYILPSVRGKG--GGLVLAKSGGEKCPLSVVQSPSELSNGLPVRFKASPRSKYISVGMLLGIEV   78 (96)
T ss_dssp             CCCCTTSCCCBSSSSCEEEEESSSSSC--CSEEEECCTTCSSCCEEEECSSTTCCCCCEEEECSSCCSBCCTTCCBEEEE
T ss_pred             CcEecCCCEeeeCCCcEEEeeCccCCC--CeEEEeCCCCCCCCCccEECCCCCCCCceEEEEecCCCCEEecCCcEEEEe
Confidence            6999999999 9999999999999997  899999999999999999999999999999999987889999999999999


Q ss_pred             ecCCCCCCcCCCC-cEEEe
Q 040351          108 SRVSSLQQCNKDS-LWKVD  125 (232)
Q Consensus       108 ~~~~~~~~C~~st-~W~V~  125 (232)
                      ...   +.|++++ +|||+
T Consensus        79 ~~~---~~C~~st~~Wkv~   94 (96)
T 1r8o_A           79 IES---PECAPKPSMWSVK   94 (96)
T ss_dssp             SSC---CTTSCSSEECEEE
T ss_pred             CCC---CccCCCCCeEEEe
Confidence            865   7999999 99997


No 16 
>1r8o_B STI, kunitz trypsin inhibitor; kunitz (STI) trypsin inhibitor, beta-trefoil fold, hydrolase inhibitor; 1.83A {Copaifera langsdorffii} SCOP: b.42.4.1
Probab=99.78  E-value=2.5e-19  Score=130.74  Aligned_cols=62  Identities=27%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             EEeCCC--CCCcCCeEEEEcccccchhccccCCCCCeEEEeccCCCCCCCCcccceeeEEeeC-CeeEEEEEcCCCCCCC
Q 040351          136 ITIGEG--KTCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGVSNVD-GVQRLVVVDDNDQPNL  212 (232)
Q Consensus       136 V~tGg~--~~~~~~FkIeK~~~~~~~~~~~~~~~~~YKLvfCp~~~~~~c~~~C~dVGi~~d~-g~rrL~l~~d~~~~~~  212 (232)
                      |+|||.  ++..|||||||++             .+|||+|||+     |... .||||++|+ |+|||++.++     +
T Consensus         6 V~~g~~~~~~~~~~FkIek~~-------------~~Yklv~CP~-----c~~~-~diGI~~d~~g~rrll~~~~-----~   61 (71)
T 1r8o_B            6 VTVGNPKVSVFGGPFKIEEGK-------------SGYKDVYSSS-----KGRD-LDDGIEVNKKKEKRLVVKDG-----N   61 (71)
T ss_dssp             EESCCTTSCSSCCSEEEEEET-------------TEEEEEEECT-----TSCE-EEEEEEECTTSCEEEEECTT-----C
T ss_pred             EEEcCCCCccccceEEEEECC-------------CceEEEECCC-----CCcc-cceeEEEeCCCEEEEEEccC-----C
Confidence            999994  4557999999997             4699999996     4456 999999875 5688866244     3


Q ss_pred             CeeEEEEEc
Q 040351          213 PLPVVLFPA  221 (232)
Q Consensus       213 pf~V~F~ka  221 (232)
                      ||.|+|+||
T Consensus        62 pf~v~F~ka   70 (71)
T 1r8o_B           62 PFIIRFKKS   70 (71)
T ss_dssp             CCCEEEEEC
T ss_pred             ceEEEEEEC
Confidence            999999997


No 17 
>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} PDB: 3azw_A 3azv_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A
Probab=74.45  E-value=15  Score=34.10  Aligned_cols=112  Identities=16%  Similarity=0.309  Sum_probs=73.3

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCC----CCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecC---CCCccee
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVK----TGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPN---DNSIIVR   98 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G----~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~---~~~~vI~   98 (232)
                      ....+.|-.|++|+-..+||++......-    ...++.......          .+.+-.|+++++...   +.+.+||
T Consensus       229 ~~s~lkD~wGn~L~YnK~Yyl~N~~~~nkyI~~~s~~~~~~~~~r----------n~rLY~G~k~IIKr~~~~n~Dn~VR  298 (424)
T 3n7l_A          229 YTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKN----------NNDFNEGYKIIIKRIRGNTNDTRVR  298 (424)
T ss_dssp             CTTBCBCTTSSBCBSSSEEEEEETTCTTEEEEEETTEEEEEECSC----------SSCSCCSCCEEEEEEECSCCSSBCB
T ss_pred             CcchhhhccCCccccCceEEEEeccCccccccccCceEEEeeccc----------hhhhhcCceEEEEEccCCCCcceee
Confidence            34688999999999999999999864321    002222222111          455779999998863   3788999


Q ss_pred             cccceEEEEecCCCCCCcCCCCcEEEecCCCcC--cceEEEeCC-CCC-----CcCCeEEEEccc
Q 040351           99 ESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASL--GKQFITIGE-GKT-----CQNLFKLEKVSA  155 (232)
Q Consensus        99 e~t~lnI~F~~~~~~~~C~~st~W~V~~~d~~~--g~~~V~tGg-~~~-----~~~~FkIeK~~~  155 (232)
                      .+..+.|.|...        +..|+|.-+-+..  ++-.+.+|= .+.     ..|.|.|+....
T Consensus       299 ~~D~IYLN~v~~--------N~eYrLyaY~s~~~~Ek~l~~~~~~~~~~~~~~~y~~f~Ik~~~~  355 (424)
T 3n7l_A          299 GENVLYFNTTID--------NKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNT  355 (424)
T ss_dssp             TTCEEEEEEESS--------SSEEEEEECCCSSCCSTTEEEEEEECCCHHHHHHHSCEEEEEEEC
T ss_pred             cCCEEEEEEEec--------CcEEEEEEEcccCCccceEEEEeccccccccccccceEEEEeccC
Confidence            999999999876        5579998643222  222233332 211     235899998864


No 18 
>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A
Probab=70.78  E-value=17  Score=33.78  Aligned_cols=86  Identities=13%  Similarity=0.101  Sum_probs=60.3

Q ss_pred             CCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEE-cCCCCCCCceEEEecCC---CCcceecccc
Q 040351           27 SEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQ-LSPKDKRGKNLVLLPND---NSIIVRESTN  102 (232)
Q Consensus        27 ~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ-~~~~~~~GlPV~Fsp~~---~~~vI~e~t~  102 (232)
                      ...+.|-.|++|+-..+||+++.....-   -+.+.+..    =+.+-+ ..+.+-.|+++++....   .+..||.+..
T Consensus       220 ~s~lKDfwGn~L~YnK~YyL~N~~~~n~---~I~~~s~~----~~~i~~~~n~rLY~G~k~IIKr~~s~n~Dn~Vr~gD~  292 (420)
T 3pme_A          220 RNVIKDYWGNPLKFDTEYYMINYNYIDR---YIAPKNNI----LVLVQYSDISKLYTKNPITIKSAANKNPYSRILNGDD  292 (420)
T ss_dssp             TTBCBCTTSSBCBSSCCBEEEETTCTTE---EEEEETTE----EEEEECSSTTCSCCSCCEEEEETTCCCTTCBCBTTCE
T ss_pred             cchhhhccCCccccCceEEEEEccCCCc---ccccccce----eEEeccchhhhhhcCceEEEEEccCCCCcceEecCCE
Confidence            4578999999999999999999865431   22222210    000000 44457799999999743   7889999999


Q ss_pred             eEEEEecCCCCCCcCCCCcEEEecC
Q 040351          103 IKLKFSRVSSLQQCNKDSLWKVDND  127 (232)
Q Consensus       103 lnI~F~~~~~~~~C~~st~W~V~~~  127 (232)
                      +.|.|...        +..|+|-.+
T Consensus       293 IYln~v~~--------n~eYrLy~d  309 (420)
T 3pme_A          293 IMFHMLYD--------SREYMIIRD  309 (420)
T ss_dssp             EEEEEEET--------TEEEEEEEC
T ss_pred             EEEEEEeC--------CcEEEEEEe
Confidence            99998876        556998853


No 19 
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=61.78  E-value=51  Score=30.69  Aligned_cols=87  Identities=18%  Similarity=0.287  Sum_probs=63.2

Q ss_pred             CCCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEEcCC-----------CCCCCceEEEec---
Q 040351           25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSP-----------KDKRGKNLVLLP---   90 (232)
Q Consensus        25 a~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ~~~-----------~~~~GlPV~Fsp---   90 (232)
                      ..++.+.|--|++|+-..+||+++.....-   -+++.+    . ++...|.+.           .+-.|+++++..   
T Consensus       220 ~~~s~LKdfWgn~L~Ynk~Yyl~N~~~~~~---~i~~~~----~-~~~~~~~r~~~~~~~~~~n~~ly~G~~~iIk~~~~  291 (413)
T 3rsj_A          220 PDPSILKDFWGNYLLYNKRYYLLNLLRTDK---SITQNS----N-FLNINQQRGVYQKPNIFSNTRLYTGVEVIIRKNGS  291 (413)
T ss_dssp             SCTTBCBCTTSSBCBSSCEEEEEESSSTTE---EEEECS----S-SEEEEEECCEEEETTTEEEECSSCSCEEEEEECC-
T ss_pred             CCchhhhhhcCChhhcCceEEEEeccCcCc---cccccc----c-eeEEecccCcccccchhhhhhhhcCceEEEEEccc
Confidence            356789999999999999999999876542   333322    2 444444322           367899999883   


Q ss_pred             C---CCCcceecccceEEEEecCCCCCCcCCCCcEEEecC
Q 040351           91 N---DNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDND  127 (232)
Q Consensus        91 ~---~~~~vI~e~t~lnI~F~~~~~~~~C~~st~W~V~~~  127 (232)
                      .   +.+.+||.+..+.|.|...        +..|+|--+
T Consensus       292 ~~~~~~d~~VR~~D~iyln~v~~--------n~ey~ly~~  323 (413)
T 3rsj_A          292 TDISNTDNFVRKNDLAYINVVDR--------DVEYRLYAD  323 (413)
T ss_dssp             ----CCCCBCBTTCEEEEEEEET--------TEEEEEEEC
T ss_pred             CCCCCCcceeecCCEEEEEEEec--------CcEEEEEEe
Confidence            2   2788999999999999876        456998643


No 20 
>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} PDB: 2vua_A 3fuo_A
Probab=54.75  E-value=1.4e+02  Score=27.96  Aligned_cols=87  Identities=15%  Similarity=0.284  Sum_probs=58.7

Q ss_pred             CCceecCCCCcccCCCCEEEEecccCCC--------CCCceEEecCCCCCCCCceEEcCC-----CCCCCceEEEecC--
Q 040351           27 SEPILDVYGNQVDSSHRYYLVSALWGVK--------TGGGISADKGKNGQCPTDVIQLSP-----KDKRGKNLVLLPN--   91 (232)
Q Consensus        27 ~~~VlDtdG~~L~~G~~YYIlPa~~g~G--------~gGGl~l~~t~n~~CPl~VvQ~~~-----~~~~GlPV~Fsp~--   91 (232)
                      ...+.|-.|++|+-..+||++++....-        ..+=|.+..      |..+.+..+     ..-+|+++++...  
T Consensus       241 ~s~lkDfwGn~L~YnKeYYL~N~~~~n~yI~~nn~~~~~~l~i~~------~r~~~~~~~i~ln~rlY~G~KfiIkk~~s  314 (444)
T 2vu9_A          241 SGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKG------PRGSVMTTNIYLNSSLYRGTKFIIKKYAS  314 (444)
T ss_dssp             CSBCBCTTSSBCBTTCCBEEEESSCTTCEEEEECSSTTCEEEEEC------CCCEEEETTTEEEECCSCSCCEEEEESSC
T ss_pred             cchhhhccCCccccCceeEEEeccCCCcchhhccCccceEEEEec------CCCcccccchhhhhhhccCceEEEEEccC
Confidence            4678999999999999999999875431        011222222      223332221     2568888888732  


Q ss_pred             -CCCcceecccceEEEEecCCCCCCcCCCCcEEEecC
Q 040351           92 -DNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDND  127 (232)
Q Consensus        92 -~~~~vI~e~t~lnI~F~~~~~~~~C~~st~W~V~~~  127 (232)
                       +++.+||....+.|.+...        ...|+|.-+
T Consensus       315 ~nnDn~Vrk~D~vyi~v~~~--------n~eyrly~~  343 (444)
T 2vu9_A          315 GNKDNIVRNNDRVYINVVVK--------NKEYRLATN  343 (444)
T ss_dssp             CCSSCBCBTTCEEEEEEESS--------SCEEEEEBC
T ss_pred             CCccceeecCCEEEEEEEcC--------CcEEEEEee
Confidence             2788999999999988765        456999643


No 21 
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=46.43  E-value=63  Score=33.93  Aligned_cols=86  Identities=17%  Similarity=0.270  Sum_probs=60.8

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCCCCCCCCceEE------cCCCCCCCceEEEecC----CCCc
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQ------LSPKDKRGKNLVLLPN----DNSI   95 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~n~~CPl~VvQ------~~~~~~~GlPV~Fsp~----~~~~   95 (232)
                      .+..+.|-.|++|+-..+||++......-   =+++.+    .-.+.+-+      ....+-.|++|++...    +.+.
T Consensus      1068 ~~s~lkD~wGn~L~YnK~Yyl~N~~~~nk---yI~~~s----~~~~~~~~~r~~i~~n~rLY~G~k~iIkr~~~~~n~Dn 1140 (1252)
T 3ffz_A         1068 NTNILKDFWGNYLLYDKEYYLLNVLKPNN---FIDRRK----DSTLSINNIRSTILLANRLYSGIKVKIQRVNNSSTNDN 1140 (1252)
T ss_dssp             CTTBCBBSSSSBCBSSCEEEEEESSCTTE---EEEECT----TSBEEEEEECCEETTEECSSCSCEEEEEESSCCTTSCS
T ss_pred             CcchhhhccCCccccCceeEEEeccCccc---cccccc----cceeeeeccccchhhhhhhhcCceEEEEecCCCCCCcc
Confidence            45688999999999999999999875442   222222    12222222      2334779999999853    3788


Q ss_pred             ceecccceEEEEecCCCCCCcCCCCc-EEEec
Q 040351           96 IVRESTNIKLKFSRVSSLQQCNKDSL-WKVDN  126 (232)
Q Consensus        96 vI~e~t~lnI~F~~~~~~~~C~~st~-W~V~~  126 (232)
                      +||.+..+.|.|...        +.. |+|-.
T Consensus      1141 ~Vr~~D~iyln~v~~--------n~e~y~ly~ 1164 (1252)
T 3ffz_A         1141 LVRKNDQVYINFVAS--------KTHLFPLYA 1164 (1252)
T ss_dssp             BCBTTCEEEEEEEEE--------TTEEEEEEE
T ss_pred             eeecCCEEEEEEEec--------CCceEEEEE
Confidence            999999999988775        456 88853


No 22 
>2hm3_A Nematocyst outer WALL antigen; disulfide, evolution, cysteine rich, structural protein; NMR {Hydra vulgaris} PDB: 2hm4_A 2hm5_A 2hm6_A
Probab=37.70  E-value=12  Score=22.01  Aligned_cols=15  Identities=33%  Similarity=0.893  Sum_probs=10.7

Q ss_pred             eccCCCCCCCCcccc
Q 040351          174 HCSTPVNGSCDTLCK  188 (232)
Q Consensus       174 fCp~~~~~~c~~~C~  188 (232)
                      -||+.|.+.|...|+
T Consensus         7 tcpsgcsgdcypeck   21 (31)
T 2hm3_A            7 TCPSGCSGDCYPECK   21 (31)
T ss_dssp             CCCTTCCGGGTTTTC
T ss_pred             cCCCCcCccccCccC
Confidence            489888766766665


No 23 
>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} PDB: 3mpp_G
Probab=35.79  E-value=63  Score=30.48  Aligned_cols=88  Identities=19%  Similarity=0.255  Sum_probs=56.7

Q ss_pred             CCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCC--CCCCCCceEEcCC----CCCCCceEEEecCC------CC
Q 040351           27 SEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK--NGQCPTDVIQLSP----KDKRGKNLVLLPND------NS   94 (232)
Q Consensus        27 ~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~--n~~CPl~VvQ~~~----~~~~GlPV~Fsp~~------~~   94 (232)
                      ...+.|-.|++|+-..+||+++.....-   -+...+..  ...=|..+.+...    .+-.|+++++...+      ++
T Consensus       272 ~s~lKDfwGn~L~YnK~YyL~N~~~~n~---~I~~nn~~~l~i~~~R~~~~~~nlN~~~LY~G~KfiIkk~~~s~~i~nd  348 (482)
T 2vxr_A          272 TNTLKDFWGNPLRYDTQYYLFNQGMQNI---YIKYFSKASMGETAPRTNFNNAAINYQNLYLGLRFIIKKASNSRNINND  348 (482)
T ss_dssp             TTSCBCTTSSBCBTTCEEEEEESSSTTE---EEEEEGGGTEEEEEECCEEECSSCEEECCSCSCEEEEEECTTSCCCCTT
T ss_pred             cchhhhccCCccccCceeEEEeccCCCc---chhhcCcceEEEecccccccccccchhhhccCceEEEEecCCCCCCccc
Confidence            4688999999999999999999865431   22211110  0011223333322    23458888887432      57


Q ss_pred             cceecccceEEEEecCCCCCCcCCCCc-EEEe
Q 040351           95 IIVRESTNIKLKFSRVSSLQQCNKDSL-WKVD  125 (232)
Q Consensus        95 ~vI~e~t~lnI~F~~~~~~~~C~~st~-W~V~  125 (232)
                      .+||.+..+.|.+...        ... |+|-
T Consensus       349 ~~VRk~D~iyi~v~~~--------n~e~yrly  372 (482)
T 2vxr_A          349 NIVREGDYIYLNIDNI--------SDESYRVY  372 (482)
T ss_dssp             CBCCTTCCEEEEESSS--------SSSCEEEE
T ss_pred             ceeecCCEEEEEEEcC--------CCeeEEEE
Confidence            8999999999888654        345 9885


No 24 
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=34.42  E-value=19  Score=19.98  Aligned_cols=15  Identities=20%  Similarity=0.222  Sum_probs=12.1

Q ss_pred             CCCCceecCCCCccc
Q 040351           25 SESEPILDVYGNQVD   39 (232)
Q Consensus        25 a~~~~VlDtdG~~L~   39 (232)
                      +.+..+||.||+.+-
T Consensus         4 ~~ss~IYD~~g~~i~   18 (26)
T 2v2f_A            4 TTSSKIYDNKNQLIA   18 (26)
T ss_pred             CCCCEEEeCCCCEee
Confidence            455789999999875


No 25 
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=34.30  E-value=1.1e+02  Score=28.95  Aligned_cols=80  Identities=18%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             CCceecCCCCcccCCCCEEEEecccCCCCCCceEEecCC--CCCCCCceEEcCC------CCCCCceEEEec---C-CCC
Q 040351           27 SEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK--NGQCPTDVIQLSP------KDKRGKNLVLLP---N-DNS   94 (232)
Q Consensus        27 ~~~VlDtdG~~L~~G~~YYIlPa~~g~G~gGGl~l~~t~--n~~CPl~VvQ~~~------~~~~GlPV~Fsp---~-~~~   94 (232)
                      ...+.|--|++|+-..+||+++.....-   =+...+..  ...=|..+.+...      .+-+|+.+++..   . +.+
T Consensus       248 ~~~lkD~wgn~L~Ynk~Yyl~N~~~~~~---~i~~~~~~~l~i~~~r~~~~~~~~~ln~~~ly~G~kfiI~~~~~~~~~d  324 (452)
T 1a8d_A          248 ITFLRDFWGNPLRYDTEYYLIPVASSSK---DVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEID  324 (452)
T ss_dssp             SSBCBCTTSSBCBTTCCBEEEEGGGTTE---EEEESSTTSCEEEEECCEEEETTTTEEEECCSCSCEEEEEESSCCCTTC
T ss_pred             cchhhhccCCccccCceeEEEeccCCCc---chhhcCcceEEEeccccccccccceechhhhccCceEEEEecCCCCCcc
Confidence            4678899999999999999999876542   23321110  0112233333322      245899998883   2 378


Q ss_pred             cceecccceEEEEec
Q 040351           95 IIVRESTNIKLKFSR  109 (232)
Q Consensus        95 ~vI~e~t~lnI~F~~  109 (232)
                      .+||....+.|.++.
T Consensus       325 ~~Vrk~D~vyi~~~~  339 (452)
T 1a8d_A          325 SFVKSGDFIKLYVSY  339 (452)
T ss_dssp             CBCBTTEEEEEEEEE
T ss_pred             ceeecCCEEEEEEEe
Confidence            899999999998843


No 26 
>2kss_A Carotenogenesis protein CARS; antirepressor, activator, carotenoid biosynthesis, transcription, transcription regulation, transcription REGU; NMR {Myxococcus xanthus}
Probab=34.27  E-value=11  Score=27.85  Aligned_cols=24  Identities=21%  Similarity=0.068  Sum_probs=21.2

Q ss_pred             ceecCCCCcccCCCCEEEEecccC
Q 040351           29 PILDVYGNQVDSSHRYYLVSALWG   52 (232)
Q Consensus        29 ~VlDtdG~~L~~G~~YYIlPa~~g   52 (232)
                      .-.|.+|.|+|.|.+--|+|+.+.
T Consensus        29 i~~dv~gapvrig~~v~iv~~s~~   52 (106)
T 2kss_A           29 ICHDVDGAPVRIGAKVKVVPHSED   52 (106)
T ss_dssp             CCCCCSSCSSCTTCEEECCSSCSS
T ss_pred             EEEccCCCceEecceEEEeccccC
Confidence            346999999999999999999875


No 27 
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=33.66  E-value=21  Score=28.42  Aligned_cols=21  Identities=14%  Similarity=0.281  Sum_probs=17.2

Q ss_pred             CCCCcccCCCCEEEEecccCC
Q 040351           33 VYGNQVDSSHRYYLVSALWGV   53 (232)
Q Consensus        33 tdG~~L~~G~~YYIlPa~~g~   53 (232)
                      ..|-+-++|.+||+++...+.
T Consensus        98 p~G~EF~pG~~YY~ISts~~~  118 (138)
T 1shx_A           98 SLGFEFRPGREYFYISSAIPD  118 (138)
T ss_dssp             TTCCCCCTTEEEEEEEEESSC
T ss_pred             CCceeecCCCeEEEEEcCCCC
Confidence            368899999999999876553


No 28 
>2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A
Probab=31.02  E-value=16  Score=34.03  Aligned_cols=24  Identities=13%  Similarity=0.432  Sum_probs=15.2

Q ss_pred             CCCceec----CCCCcccCCCCEEEEec
Q 040351           26 ESEPILD----VYGNQVDSSHRYYLVSA   49 (232)
Q Consensus        26 ~~~~VlD----tdG~~L~~G~~YYIlPa   49 (232)
                      +..|++.    .|-..++.+.+||+...
T Consensus        26 ~~NPi~~~~~~~DPsii~~~g~YYl~~T   53 (470)
T 2x8s_A           26 AQKPIFKEVSVHDPSIIETNGTFYVFGS   53 (470)
T ss_dssp             --CCCCBCCCCSSCEEEEETTEEEEECS
T ss_pred             cCCCccCCCcCCCCEEEEECCEEEEEEC
Confidence            3456663    35566788889999753


No 29 
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=28.71  E-value=30  Score=28.09  Aligned_cols=21  Identities=29%  Similarity=0.388  Sum_probs=17.8

Q ss_pred             CCCCcccCCCCEEEEecccCC
Q 040351           33 VYGNQVDSSHRYYLVSALWGV   53 (232)
Q Consensus        33 tdG~~L~~G~~YYIlPa~~g~   53 (232)
                      ..|-+-++|.+||+++...|.
T Consensus       108 p~G~EF~pG~~YY~ISTS~g~  128 (157)
T 2wo3_B          108 SLGFEFRPGHEYYYISATPPN  128 (157)
T ss_dssp             TTSCCCCTTCEEEEEEECTTC
T ss_pred             CCCeeeeCCCeEEEEEecCCC
Confidence            368899999999999987664


No 30 
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=25.70  E-value=1.6e+02  Score=31.16  Aligned_cols=92  Identities=20%  Similarity=0.243  Sum_probs=57.5

Q ss_pred             CCceecCCCCcccCCCCEEEEecccCCC-----CCCceEEecCCCCCCCCceEEcCCCCCCCceEEEec----CC-CCcc
Q 040351           27 SEPILDVYGNQVDSSHRYYLVSALWGVK-----TGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLP----ND-NSII   96 (232)
Q Consensus        27 ~~~VlDtdG~~L~~G~~YYIlPa~~g~G-----~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp----~~-~~~v   96 (232)
                      ...+.|-.|++|+-..+||++......-     ..+=|....+++..--..+.-....+-.|.++++..    .+ ++.+
T Consensus      1080 ~s~lkD~wGn~L~YnK~Yyl~N~~~~~~~i~~nn~~~l~i~~~~~~~~~~~i~lN~r~LY~G~kfiI~k~~~~~~ind~~ 1159 (1290)
T 1epw_A         1080 SEYLKDFWGNPLMYNKEYYMFNAGNKNSYIKLKKDSPVGEILTRSKYNQNSKYINYRDLYIGEKFIIRRKSNSQSINDDI 1159 (1290)
T ss_dssp             CSBCBCTTSSBCEETCEEEEEETTSTTEEEEECTTSSSEEEEECCBCCSCCSSCCCBCSSCSCCEEEEECSCCSCSSCEE
T ss_pred             cchhhhccCCccccCceeEEEeccCCCcchhhcCcceeEEecCCCcccccchhhhhhhhccCceEEEEecCCCCCccccc
Confidence            4578999999999999999999865431     002222322222111111111111244888988883    23 5789


Q ss_pred             eecccceEEEEecCCCCCCcCCCCcEEEec
Q 040351           97 VRESTNIKLKFSRVSSLQQCNKDSLWKVDN  126 (232)
Q Consensus        97 I~e~t~lnI~F~~~~~~~~C~~st~W~V~~  126 (232)
                      ||.+..+.|.+...        ...|+|--
T Consensus      1160 Vrk~D~iyi~v~~~--------n~eyrly~ 1181 (1290)
T 1epw_A         1160 VRKEDYIYLDFFNL--------NQEWRVYT 1181 (1290)
T ss_dssp             CBTTCEEEEEEEET--------TEEEEEEE
T ss_pred             eecCCEEEEEEEcC--------CceEEEEe
Confidence            99999999988765        45699953


No 31 
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=23.90  E-value=46  Score=26.21  Aligned_cols=21  Identities=24%  Similarity=0.471  Sum_probs=17.5

Q ss_pred             CCCCcccCCCCEEEEecccCC
Q 040351           33 VYGNQVDSSHRYYLVSALWGV   53 (232)
Q Consensus        33 tdG~~L~~G~~YYIlPa~~g~   53 (232)
                      ..|-+-++|.+||+++.....
T Consensus        98 p~G~EF~pG~~YY~ISt~~~~  118 (132)
T 3hei_B           98 TLGKEFKEGHSYYYISKPIHQ  118 (132)
T ss_dssp             TTSCCCCTTCEEEEEEEESSC
T ss_pred             CCCeeecCCCcEEEEEccCCC
Confidence            468899999999999986654


No 32 
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=22.97  E-value=37  Score=28.11  Aligned_cols=21  Identities=14%  Similarity=0.281  Sum_probs=17.3

Q ss_pred             CCCCcccCCCCEEEEecccCC
Q 040351           33 VYGNQVDSSHRYYLVSALWGV   53 (232)
Q Consensus        33 tdG~~L~~G~~YYIlPa~~g~   53 (232)
                      ..|-+-++|.+||+++...+.
T Consensus       127 p~G~EF~pG~~YYyISTS~~~  147 (177)
T 2x11_B          127 SLGFEFRPGREYFYISSAIPD  147 (177)
T ss_dssp             TTCCCCCTTEEEEEEEEESSC
T ss_pred             CCCccccCCCeEEEEecCCCC
Confidence            368899999999999876554


No 33 
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=22.61  E-value=3.4e+02  Score=28.72  Aligned_cols=93  Identities=14%  Similarity=0.264  Sum_probs=59.4

Q ss_pred             CCCceecCCCCcccCCCCEEEEecccCCC--------CCCceEEecCCCCCCCCceEEcCCCCCCCceEEEecC---CCC
Q 040351           26 ESEPILDVYGNQVDSSHRYYLVSALWGVK--------TGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPN---DNS   94 (232)
Q Consensus        26 ~~~~VlDtdG~~L~~G~~YYIlPa~~g~G--------~gGGl~l~~t~n~~CPl~VvQ~~~~~~~GlPV~Fsp~---~~~   94 (232)
                      ....+.|-.|++|+-..+||++......-        ..+=|.+..++...--..+.- ...+-.|+++++...   +++
T Consensus      1092 ~~s~lkD~wgn~L~YnK~YYL~N~~~~n~yI~~nn~~~~~~l~i~~~r~~~~~~~i~l-n~~Ly~G~kfiIkk~~~~~nd 1170 (1295)
T 2nyy_A         1092 NSGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPRGSVMTTNIYL-NSSLYRGTKFIIKKYASGNKD 1170 (1295)
T ss_dssp             CTTBCBCTTSSBCBSSCCBEEEESSSTTCEEEESSSSTTCCEEEECCCCEEEETTTEE-EECCSCSCCEEEEESSCCCSS
T ss_pred             CcchhhhccCCccccCceeEEEeccCCCcchhhcccccceeEEeeccccccccchhhh-hhhhccCceEEEEecCCCCcc
Confidence            34688999999999999999999875321        112333322211000001111 122568999988832   278


Q ss_pred             cceecccceEEEEecCCCCCCcCCCCcEEEecC
Q 040351           95 IIVRESTNIKLKFSRVSSLQQCNKDSLWKVDND  127 (232)
Q Consensus        95 ~vI~e~t~lnI~F~~~~~~~~C~~st~W~V~~~  127 (232)
                      .+||.+..+.|.+...        ...|+|.-+
T Consensus      1171 n~Vrk~D~vyi~v~~~--------n~eyrly~~ 1195 (1295)
T 2nyy_A         1171 NIVRNNDRVYINVVVK--------NKEYRLATN 1195 (1295)
T ss_dssp             CBCBTTCEEEEEEEET--------TEEEEEEBC
T ss_pred             ceeecCCEEEEEEEcC--------CceEEEEee
Confidence            8999999999988765        456999743


Done!