Query 040358
Match_columns 236
No_of_seqs 106 out of 401
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 12:07:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gha_A Disulfide bond formatio 99.1 5.5E-10 1.9E-14 93.9 12.5 167 33-219 20-193 (202)
2 3bci_A Disulfide bond protein 99.0 4.5E-09 1.5E-13 86.0 13.8 163 35-217 4-177 (186)
3 3f4s_A Alpha-DSBA1, putative u 99.0 1E-09 3.5E-14 94.1 8.4 164 31-217 28-210 (226)
4 3gyk_A 27KDA outer membrane pr 99.0 1.5E-08 5E-13 81.8 14.2 158 31-215 11-170 (175)
5 3gmf_A Protein-disulfide isome 98.9 2.2E-09 7.6E-14 90.8 7.5 162 32-217 5-196 (205)
6 2rem_A Disulfide oxidoreductas 98.9 2.8E-08 9.7E-13 81.2 13.3 166 23-213 5-179 (193)
7 2znm_A Thiol:disulfide interch 98.9 1.4E-08 4.9E-13 83.2 10.5 154 23-201 3-160 (195)
8 4dvc_A Thiol:disulfide interch 98.9 2.1E-08 7.1E-13 80.8 11.2 152 40-214 19-178 (184)
9 3h93_A Thiol:disulfide interch 98.8 2.6E-08 8.9E-13 81.7 11.3 141 37-202 20-163 (192)
10 3hd5_A Thiol:disulfide interch 98.8 2.1E-07 7.3E-12 76.4 14.8 166 23-214 6-180 (195)
11 3hz8_A Thiol:disulfide interch 98.7 4E-07 1.4E-11 75.4 13.8 166 23-213 5-178 (193)
12 3gn3_A Putative protein-disulf 98.6 3.9E-07 1.3E-11 75.5 10.8 151 41-213 13-181 (182)
13 1z6m_A Conserved hypothetical 98.4 9.1E-07 3.1E-11 71.2 8.8 153 31-213 16-173 (175)
14 3c7m_A Thiol:disulfide interch 98.4 8E-07 2.7E-11 72.3 8.2 167 36-214 9-190 (195)
15 3l9s_A Thiol:disulfide interch 98.3 4.2E-06 1.4E-10 69.4 11.3 137 42-202 21-162 (191)
16 3l9v_A Putative thiol-disulfid 98.3 5E-06 1.7E-10 68.5 11.6 153 42-218 14-183 (189)
17 2in3_A Hypothetical protein; D 98.2 3E-05 1E-09 64.2 12.6 165 42-216 6-208 (216)
18 2imf_A HCCA isomerase, 2-hydro 98.1 2.9E-05 9.9E-10 64.2 11.6 161 44-216 1-194 (203)
19 3feu_A Putative lipoprotein; a 97.8 8.9E-05 3.1E-09 60.8 9.3 150 42-214 22-180 (185)
20 3kzq_A Putative uncharacterize 97.8 0.00035 1.2E-08 57.8 12.3 167 44-217 3-202 (208)
21 3gl5_A Putative DSBA oxidoredu 97.6 0.00059 2E-08 58.3 11.5 169 43-219 2-214 (239)
22 3fz5_A Possible 2-hydroxychrom 97.5 0.00051 1.7E-08 56.9 9.0 165 41-214 2-198 (202)
23 1r4w_A Glutathione S-transfera 97.1 0.0025 8.5E-08 53.4 9.4 173 43-224 5-220 (226)
24 3rpp_A Glutathione S-transfera 96.5 0.027 9.1E-07 47.7 11.3 173 42-223 4-219 (234)
25 1un2_A DSBA, thiol-disulfide i 96.1 0.0078 2.7E-07 49.9 5.5 57 144-202 5-61 (197)
26 1v58_A Thiol:disulfide interch 93.1 0.15 5E-06 43.1 6.0 46 36-85 91-136 (241)
27 3tdg_A DSBG, putative uncharac 87.5 0.53 1.8E-05 41.3 4.4 41 40-86 145-185 (273)
28 1t3b_A Thiol:disulfide interch 86.2 1.2 4.1E-05 36.5 5.7 44 37-85 81-124 (211)
29 1eej_A Thiol:disulfide interch 82.8 1.9 6.5E-05 35.3 5.5 45 36-85 80-124 (216)
30 1fo5_A Thioredoxin; disulfide 77.5 2.3 7.8E-05 28.3 3.6 36 42-79 2-37 (85)
31 3gv1_A Disulfide interchange p 77.5 1.7 6E-05 33.9 3.4 40 39-85 11-50 (147)
32 4fo5_A Thioredoxin-like protei 65.7 11 0.00037 27.7 5.3 44 37-83 27-70 (143)
33 3die_A Thioredoxin, TRX; elect 64.0 14 0.00047 25.3 5.3 34 41-76 18-51 (106)
34 1nho_A Probable thioredoxin; b 62.1 3.2 0.00011 27.6 1.5 19 43-61 2-20 (85)
35 2trx_A Thioredoxin; electron t 61.7 17 0.00059 24.9 5.5 34 40-75 18-51 (108)
36 3hxs_A Thioredoxin, TRXP; elec 61.7 18 0.00061 26.4 5.9 33 41-75 50-82 (141)
37 1un2_A DSBA, thiol-disulfide i 61.2 6.8 0.00023 31.8 3.7 42 41-84 112-156 (197)
38 2b5x_A YKUV protein, TRXY; thi 60.5 12 0.00041 27.1 4.7 36 41-78 28-63 (148)
39 1thx_A Thioredoxin, thioredoxi 60.5 14 0.00049 25.5 5.0 34 40-75 23-56 (115)
40 1nsw_A Thioredoxin, TRX; therm 60.1 16 0.00054 25.0 5.1 33 41-75 16-48 (105)
41 2i4a_A Thioredoxin; acidophIle 59.8 19 0.00063 24.6 5.4 34 40-75 18-51 (107)
42 2yzu_A Thioredoxin; redox prot 59.7 18 0.0006 24.7 5.3 33 41-75 17-49 (109)
43 1o73_A Tryparedoxin; electron 59.6 10 0.00036 27.7 4.2 39 34-74 20-58 (144)
44 3ha9_A Uncharacterized thiored 59.0 14 0.00049 27.7 5.0 40 39-83 34-73 (165)
45 1fb6_A Thioredoxin M; electron 59.0 17 0.0006 24.6 5.1 33 41-75 17-49 (105)
46 2e0q_A Thioredoxin; electron t 58.6 18 0.00061 24.3 5.1 33 41-75 15-47 (104)
47 3gnj_A Thioredoxin domain prot 57.9 17 0.00058 25.1 5.0 21 41-61 21-41 (111)
48 3msz_A Glutaredoxin 1; alpha-b 57.6 4.2 0.00014 27.5 1.5 17 44-60 4-20 (89)
49 1zzo_A RV1677; thioredoxin fol 57.3 11 0.00039 26.7 4.0 29 41-70 24-52 (136)
50 2l57_A Uncharacterized protein 57.0 32 0.0011 24.4 6.5 31 39-70 23-53 (126)
51 1dby_A Chloroplast thioredoxin 56.6 20 0.00068 24.5 5.1 33 41-75 18-50 (107)
52 1t00_A Thioredoxin, TRX; redox 56.4 20 0.00068 24.8 5.1 33 41-75 22-54 (112)
53 1xwb_A Thioredoxin; dimerizati 56.3 23 0.00079 24.0 5.4 28 41-69 19-46 (106)
54 1w4v_A Thioredoxin, mitochondr 55.3 20 0.0007 25.5 5.1 33 41-75 30-62 (119)
55 2l5l_A Thioredoxin; structural 54.2 21 0.0007 26.2 5.1 33 41-75 37-69 (136)
56 1aba_A Glutaredoxin; electron 54.1 5.5 0.00019 27.4 1.7 16 46-61 2-21 (87)
57 3tco_A Thioredoxin (TRXA-1); d 53.2 23 0.00079 24.1 5.0 32 42-75 21-52 (109)
58 1ego_A Glutaredoxin; electron 53.1 14 0.00048 24.5 3.7 17 45-61 2-18 (85)
59 3m9j_A Thioredoxin; oxidoreduc 52.1 27 0.00092 23.7 5.2 33 41-75 19-51 (105)
60 3erw_A Sporulation thiol-disul 52.1 30 0.001 24.7 5.7 32 41-74 33-64 (145)
61 1lu4_A Soluble secreted antige 51.9 16 0.00053 26.1 4.0 29 41-70 23-51 (136)
62 3ul3_B Thioredoxin, thioredoxi 51.7 39 0.0013 24.2 6.2 35 39-75 39-73 (128)
63 2vlu_A Thioredoxin, thioredoxi 51.6 25 0.00084 24.8 5.0 33 41-75 33-65 (122)
64 1wjk_A C330018D20RIK protein; 51.5 27 0.00093 24.6 5.2 21 40-60 13-33 (100)
65 2o8v_B Thioredoxin 1; disulfid 51.3 25 0.00087 25.6 5.2 34 40-75 38-71 (128)
66 1i5g_A Tryparedoxin II; electr 51.2 18 0.00061 26.4 4.3 41 41-83 27-67 (144)
67 3s9f_A Tryparedoxin; thioredox 51.0 15 0.00052 28.1 4.0 47 35-83 41-87 (165)
68 3gl3_A Putative thiol:disulfid 50.7 26 0.00089 25.6 5.2 34 40-75 26-59 (152)
69 2lqo_A Putative glutaredoxin R 50.4 5.3 0.00018 28.7 1.1 16 45-60 5-20 (92)
70 3cxg_A Putative thioredoxin; m 50.2 22 0.00075 26.1 4.7 30 40-75 38-67 (133)
71 2wul_A Glutaredoxin related pr 50.2 10 0.00034 28.7 2.7 47 148-203 41-88 (118)
72 2k8s_A Thioredoxin; dimer, str 50.1 11 0.00038 25.2 2.7 17 45-61 3-19 (80)
73 1ti3_A Thioredoxin H, PTTRXH1; 50.0 30 0.001 23.8 5.2 29 41-70 25-53 (113)
74 2l5o_A Putative thioredoxin; s 49.9 28 0.00096 25.4 5.3 40 41-83 27-66 (153)
75 2i1u_A Thioredoxin, TRX, MPT46 49.5 29 0.00099 24.3 5.1 28 41-69 29-56 (121)
76 3or5_A Thiol:disulfide interch 49.3 27 0.00092 25.8 5.1 33 41-75 33-65 (165)
77 3qmx_A Glutaredoxin A, glutare 49.3 7.9 0.00027 27.7 1.9 20 42-61 14-33 (99)
78 1ep7_A Thioredoxin CH1, H-type 49.0 27 0.00092 24.1 4.8 27 42-69 24-50 (112)
79 2lrt_A Uncharacterized protein 48.6 20 0.0007 26.8 4.3 40 41-83 34-73 (152)
80 3hz4_A Thioredoxin; NYSGXRC, P 47.9 24 0.00081 26.0 4.6 33 41-75 23-55 (140)
81 3ctg_A Glutaredoxin-2; reduced 47.9 9.2 0.00031 28.8 2.2 16 45-60 38-53 (129)
82 3c1r_A Glutaredoxin-1; oxidize 47.6 12 0.00041 27.5 2.8 22 45-70 26-47 (118)
83 3rhb_A ATGRXC5, glutaredoxin-C 47.4 16 0.00053 26.2 3.3 15 189-203 71-85 (113)
84 3f3q_A Thioredoxin-1; His TAG, 47.3 33 0.0011 23.9 5.1 30 40-70 22-51 (109)
85 3hcz_A Possible thiol-disulfid 47.2 12 0.00041 27.1 2.7 40 40-82 29-68 (148)
86 3aps_A DNAJ homolog subfamily 47.0 30 0.001 24.3 4.9 33 41-75 20-52 (122)
87 1o8x_A Tryparedoxin, TRYX, TXN 47.0 23 0.00077 26.0 4.3 42 39-82 25-66 (146)
88 3lor_A Thiol-disulfide isomera 46.9 24 0.0008 26.1 4.4 35 40-75 28-62 (160)
89 3nzn_A Glutaredoxin; structura 46.6 8.8 0.0003 27.3 1.8 18 44-61 22-39 (103)
90 3h8q_A Thioredoxin reductase 3 46.5 16 0.00055 26.5 3.3 15 189-203 68-82 (114)
91 3uvt_A Thioredoxin domain-cont 46.4 29 0.00098 23.7 4.6 20 42-61 21-40 (111)
92 2dml_A Protein disulfide-isome 46.0 17 0.00059 26.0 3.4 34 40-75 33-66 (130)
93 3qfa_C Thioredoxin; protein-pr 45.5 30 0.001 24.5 4.7 33 41-75 30-62 (116)
94 4evm_A Thioredoxin family prot 45.1 32 0.0011 24.0 4.8 34 40-75 20-53 (138)
95 3c1r_A Glutaredoxin-1; oxidize 44.7 27 0.00091 25.5 4.3 29 170-203 66-94 (118)
96 1syr_A Thioredoxin; SGPP, stru 44.7 39 0.0013 23.5 5.1 29 41-70 25-53 (112)
97 2f9s_A Thiol-disulfide oxidore 44.5 38 0.0013 24.7 5.3 30 40-70 24-53 (151)
98 1fov_A Glutaredoxin 3, GRX3; a 44.4 10 0.00035 25.0 1.8 17 45-61 2-18 (82)
99 3eyt_A Uncharacterized protein 44.1 28 0.00094 25.7 4.4 37 36-74 22-59 (158)
100 2oe3_A Thioredoxin-3; electron 44.0 32 0.0011 24.4 4.6 33 41-75 29-61 (114)
101 1xfl_A Thioredoxin H1; AT3G510 43.8 36 0.0012 24.5 4.9 28 41-69 37-64 (124)
102 2pu9_C TRX-F, thioredoxin F-ty 43.4 43 0.0015 23.1 5.2 29 41-70 23-51 (111)
103 2djj_A PDI, protein disulfide- 42.9 39 0.0013 23.6 4.9 29 40-69 23-51 (121)
104 2voc_A Thioredoxin; electron t 42.8 26 0.0009 24.5 3.9 28 41-69 16-43 (112)
105 2dj3_A Protein disulfide-isome 42.3 26 0.00089 25.1 3.9 29 41-70 24-52 (133)
106 3ctg_A Glutaredoxin-2; reduced 42.2 30 0.001 25.9 4.3 29 170-203 78-106 (129)
107 3l4n_A Monothiol glutaredoxin- 42.1 21 0.00073 26.9 3.5 15 189-203 68-82 (127)
108 2lrn_A Thiol:disulfide interch 42.0 40 0.0014 24.8 5.1 34 40-75 27-60 (152)
109 2p5q_A Glutathione peroxidase 41.9 38 0.0013 25.2 4.9 39 41-82 31-69 (170)
110 1kte_A Thioltransferase; redox 41.2 12 0.00041 26.2 1.8 16 45-60 13-28 (105)
111 3eur_A Uncharacterized protein 41.2 33 0.0011 24.9 4.4 41 40-83 29-72 (142)
112 3h8q_A Thioredoxin reductase 3 41.1 9.8 0.00034 27.7 1.3 17 45-61 18-34 (114)
113 3fkf_A Thiol-disulfide oxidore 40.7 39 0.0013 24.3 4.7 33 39-73 30-62 (148)
114 2axo_A Hypothetical protein AT 40.7 12 0.00041 32.5 2.0 22 40-61 40-61 (270)
115 1x5d_A Protein disulfide-isome 40.6 37 0.0013 24.1 4.6 21 41-61 24-44 (133)
116 3l4n_A Monothiol glutaredoxin- 40.6 10 0.00034 28.8 1.3 17 45-61 15-31 (127)
117 2cvb_A Probable thiol-disulfid 40.1 34 0.0012 26.2 4.5 39 41-83 32-70 (188)
118 3p2a_A Thioredoxin 2, putative 40.1 49 0.0017 24.3 5.3 34 40-75 53-86 (148)
119 2v1m_A Glutathione peroxidase; 39.7 43 0.0015 24.8 4.9 40 41-83 30-69 (169)
120 3ic4_A Glutaredoxin (GRX-1); s 39.4 7.9 0.00027 26.5 0.5 17 44-60 12-28 (92)
121 3gx8_A Monothiol glutaredoxin- 39.2 21 0.00073 26.5 3.0 15 189-203 72-86 (121)
122 1h75_A Glutaredoxin-like prote 38.6 14 0.00046 24.5 1.7 16 45-60 2-17 (81)
123 3kcm_A Thioredoxin family prot 38.6 59 0.002 23.6 5.5 33 41-75 27-59 (154)
124 3hdc_A Thioredoxin family prot 38.1 52 0.0018 24.3 5.2 41 41-84 40-80 (158)
125 1r7h_A NRDH-redoxin; thioredox 37.9 14 0.00049 23.7 1.7 16 45-60 2-17 (75)
126 1wou_A Thioredoxin -related pr 37.6 58 0.002 23.3 5.2 20 42-61 24-50 (123)
127 2vim_A Thioredoxin, TRX; thior 37.5 37 0.0013 22.8 3.9 28 41-69 18-45 (104)
128 2f51_A Thioredoxin; electron t 37.4 51 0.0017 23.4 4.9 27 42-69 23-49 (118)
129 1z6n_A Hypothetical protein PA 36.9 48 0.0016 25.9 5.0 21 41-61 53-73 (167)
130 2khp_A Glutaredoxin; thioredox 36.9 15 0.0005 25.1 1.7 16 45-60 7-22 (92)
131 3rhb_A ATGRXC5, glutaredoxin-C 36.8 13 0.00043 26.7 1.3 17 45-61 20-36 (113)
132 1faa_A Thioredoxin F; electron 36.8 61 0.0021 22.7 5.2 28 41-69 36-63 (124)
133 3d6i_A Monothiol glutaredoxin- 36.5 34 0.0012 23.6 3.7 22 40-61 19-40 (112)
134 2ct6_A SH3 domain-binding glut 36.4 24 0.00082 25.6 2.9 16 44-59 8-23 (111)
135 1t1v_A SH3BGRL3, SH3 domain-bi 36.3 13 0.00043 25.9 1.2 15 189-203 58-72 (93)
136 2vm1_A Thioredoxin, thioredoxi 36.3 59 0.002 22.4 5.0 27 42-69 28-54 (118)
137 1v98_A Thioredoxin; oxidoreduc 36.1 64 0.0022 23.4 5.3 32 41-75 50-81 (140)
138 2lja_A Putative thiol-disulfid 36.0 38 0.0013 24.6 4.0 35 39-75 27-61 (152)
139 2k6v_A Putative cytochrome C o 35.3 28 0.00097 26.0 3.3 42 40-83 33-77 (172)
140 2xc2_A Thioredoxinn; oxidoredu 35.3 39 0.0013 23.6 3.8 21 41-61 32-52 (117)
141 1ilo_A Conserved hypothetical 35.1 56 0.0019 20.7 4.4 25 44-70 2-26 (77)
142 3ia1_A THIO-disulfide isomeras 35.1 39 0.0013 24.7 3.9 27 43-70 31-57 (154)
143 1gh2_A Thioredoxin-like protei 35.0 44 0.0015 22.8 4.1 21 41-61 20-40 (107)
144 1zma_A Bacterocin transport ac 34.9 38 0.0013 23.8 3.8 20 42-61 29-48 (118)
145 2j23_A Thioredoxin; immune pro 34.6 36 0.0012 24.2 3.6 28 40-68 31-58 (121)
146 3raz_A Thioredoxin-related pro 34.4 71 0.0024 23.3 5.4 30 40-70 22-51 (151)
147 3ipz_A Monothiol glutaredoxin- 34.4 15 0.00051 26.6 1.4 14 190-203 72-85 (109)
148 2dj1_A Protein disulfide-isome 34.2 33 0.0011 24.8 3.4 28 41-69 33-60 (140)
149 2gs3_A PHGPX, GPX-4, phospholi 33.9 57 0.002 25.1 4.9 40 41-83 48-87 (185)
150 2hze_A Glutaredoxin-1; thiored 33.7 17 0.00059 26.2 1.7 17 45-61 20-36 (114)
151 3dwv_A Glutathione peroxidase- 33.6 22 0.00074 27.8 2.4 36 39-76 43-78 (187)
152 3zyw_A Glutaredoxin-3; metal b 33.0 16 0.00056 26.7 1.4 14 190-203 70-83 (111)
153 4euy_A Uncharacterized protein 32.8 1.1E+02 0.0039 20.6 6.0 22 40-61 16-37 (105)
154 1a8l_A Protein disulfide oxido 32.7 63 0.0022 25.4 5.1 22 40-61 132-153 (226)
155 3lwa_A Secreted thiol-disulfid 32.6 54 0.0019 24.9 4.6 29 41-70 58-86 (183)
156 2ppt_A Thioredoxin-2; thiredox 32.5 63 0.0022 24.3 4.9 29 40-69 62-90 (155)
157 2p31_A CL683, glutathione pero 32.1 77 0.0026 24.2 5.4 39 41-82 48-86 (181)
158 3kij_A Probable glutathione pe 31.4 69 0.0024 24.4 5.0 34 40-75 36-69 (180)
159 1wik_A Thioredoxin-like protei 31.4 16 0.00054 26.3 1.1 17 45-61 16-37 (109)
160 2klx_A Glutaredoxin; thioredox 31.0 14 0.00048 25.1 0.7 16 45-60 7-22 (89)
161 2yan_A Glutaredoxin-3; oxidore 30.9 20 0.00067 25.4 1.5 16 45-60 18-38 (105)
162 2l6c_A Thioredoxin; oxidoreduc 30.2 32 0.0011 24.0 2.6 20 42-61 19-38 (110)
163 1kng_A Thiol:disulfide interch 29.7 55 0.0019 23.7 4.0 21 41-61 41-61 (156)
164 2e7p_A Glutaredoxin; thioredox 29.7 26 0.00089 24.6 2.0 16 46-61 22-37 (116)
165 3cmi_A Peroxiredoxin HYR1; thi 29.7 55 0.0019 24.7 4.1 34 39-75 29-62 (171)
166 2wem_A Glutaredoxin-related pr 29.4 20 0.00069 26.7 1.4 17 45-61 21-42 (118)
167 3dxb_A Thioredoxin N-terminall 29.1 78 0.0027 25.2 5.1 36 41-78 29-64 (222)
168 2ywi_A Hypothetical conserved 28.9 60 0.0021 24.8 4.3 38 43-83 47-84 (196)
169 3gx8_A Monothiol glutaredoxin- 28.6 21 0.00071 26.5 1.4 17 45-61 17-38 (121)
170 1r26_A Thioredoxin; redox-acti 28.6 73 0.0025 23.0 4.5 28 41-69 36-63 (125)
171 2yj7_A LPBCA thioredoxin; oxid 34.3 12 0.00042 25.3 0.0 22 40-61 17-38 (106)
172 2f8a_A Glutathione peroxidase 28.0 78 0.0027 25.2 4.9 41 40-83 45-85 (208)
173 3kh7_A Thiol:disulfide interch 27.8 66 0.0023 24.5 4.3 29 41-70 57-85 (176)
174 1jfu_A Thiol:disulfide interch 26.4 1E+02 0.0035 23.2 5.2 29 41-70 59-87 (186)
175 2b1k_A Thiol:disulfide interch 26.3 63 0.0022 24.0 3.9 21 41-61 50-70 (168)
176 1uvq_C Orexin; immunology, MHC 26.1 32 0.0011 19.8 1.5 18 183-200 4-21 (33)
177 1rw1_A Conserved hypothetical 26.0 28 0.00095 25.4 1.6 17 45-61 1-17 (114)
178 2obi_A PHGPX, GPX-4, phospholi 25.9 1.1E+02 0.0039 23.1 5.4 40 41-83 46-85 (183)
179 2h30_A Thioredoxin, peptide me 25.4 42 0.0014 24.7 2.7 30 40-70 36-65 (164)
180 3fk8_A Disulphide isomerase; A 25.4 66 0.0023 22.9 3.7 25 41-66 28-52 (133)
181 2ggt_A SCO1 protein homolog, m 25.3 83 0.0029 23.0 4.4 29 41-70 22-51 (164)
182 1qgv_A Spliceosomal protein U5 25.3 1.2E+02 0.004 22.4 5.2 21 41-61 22-42 (142)
183 3q6o_A Sulfhydryl oxidase 1; p 24.3 1.2E+02 0.0041 24.3 5.5 33 41-75 29-61 (244)
184 3fw2_A Thiol-disulfide oxidore 24.0 1.4E+02 0.0047 21.6 5.4 33 39-73 30-64 (150)
185 2ywm_A Glutaredoxin-like prote 23.8 1.2E+02 0.004 23.9 5.2 22 40-61 134-155 (229)
186 2cq9_A GLRX2 protein, glutared 23.7 30 0.001 25.7 1.5 16 45-60 28-43 (130)
187 3gix_A Thioredoxin-like protei 23.5 1.3E+02 0.0043 22.4 5.1 33 41-75 22-54 (149)
188 2vup_A Glutathione peroxidase- 23.4 97 0.0033 23.8 4.6 34 40-75 46-79 (190)
189 2wz9_A Glutaredoxin-3; protein 23.4 75 0.0026 23.6 3.8 20 42-61 32-51 (153)
190 1x5e_A Thioredoxin domain cont 23.4 1E+02 0.0035 21.6 4.4 25 45-70 25-49 (126)
191 3f9u_A Putative exported cytoc 23.3 50 0.0017 24.9 2.8 32 40-71 45-77 (172)
192 3ewl_A Uncharacterized conserv 23.0 98 0.0033 22.0 4.3 22 40-61 25-46 (142)
193 2rli_A SCO2 protein homolog, m 22.9 1.3E+02 0.0046 22.0 5.2 31 39-70 23-54 (171)
194 2fwh_A Thiol:disulfide interch 22.9 1.1E+02 0.0037 22.1 4.5 20 42-61 31-50 (134)
195 1hyu_A AHPF, alkyl hydroperoxi 22.3 89 0.0031 28.7 4.7 22 40-61 115-136 (521)
196 2ywm_A Glutaredoxin-like prote 22.3 92 0.0031 24.6 4.3 30 40-71 19-49 (229)
197 3d22_A TRXH4, thioredoxin H-ty 21.8 1.4E+02 0.0048 21.3 5.0 27 42-69 46-72 (139)
198 1mek_A Protein disulfide isome 21.4 43 0.0015 23.0 1.9 28 41-69 23-50 (120)
199 2hls_A Protein disulfide oxido 21.2 1.1E+02 0.0037 25.1 4.6 21 41-61 137-157 (243)
200 2ht9_A Glutaredoxin-2; thiored 20.6 38 0.0013 25.9 1.5 16 45-60 50-65 (146)
201 2wci_A Glutaredoxin-4; redox-a 20.4 38 0.0013 25.8 1.4 17 45-61 36-57 (135)
202 3apq_A DNAJ homolog subfamily 20.2 1.4E+02 0.0049 23.3 5.0 21 41-61 113-133 (210)
No 1
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=99.13 E-value=5.5e-10 Score=93.90 Aligned_cols=167 Identities=17% Similarity=0.213 Sum_probs=118.0
Q ss_pred CCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc--eeeEEEEeeecceeecCCCceeccCCchhhccChh
Q 040358 33 TNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS--IVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTI 110 (236)
Q Consensus 33 ~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d--~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~ 110 (236)
++..+|..+.+|+|.+|..-.||+|++|. ..+.|.+.+.+.+ .+.|.++||.- ||+.-=.+-..
T Consensus 20 ~~~~~G~~~a~vtvvef~D~~CP~C~~~~-~~~~~~l~~~~~~~g~v~~~~~~~p~-------------~~~~s~~Aa~a 85 (202)
T 3gha_A 20 GQPVLGKDDAPVTVVEFGDYKCPSCKVFN-SDIFPKIQKDFIDKGDVKFSFVNVMF-------------HGKGSRLAALA 85 (202)
T ss_dssp TSCEESCTTCSEEEEEEECTTCHHHHHHH-HHTHHHHHHHTTTTTSEEEEEEECCC-------------SHHHHHHHHHH
T ss_pred CCceecCCCCCEEEEEEECCCChhHHHHH-HHhhHHHHHHhccCCeEEEEEEecCc-------------cchhHHHHHHH
Confidence 36788899999999999999999999996 5688887655643 67777776642 11111111122
Q ss_pred hhhHhhhCCCCCCCchhhhhhhhcccCCCCCc--chhHHHHHHHHh-cCCChhhHhhcccCchhHHHHHHHHhhhhhcCC
Q 040358 111 EACAILAWPDQPKNHFDFIQCLENRTLRGPIR--DRKEAWLTCCKD-LELSPNFIKDCYESGIGRLLELKYGDETLHLNP 187 (236)
Q Consensus 111 qaCai~~~~~~~~~~~~fI~Cm~~~~~~~~~~--~~~~~~~~Ca~~-~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p 187 (236)
-.|+... +. .++|+|..-++.... ...+ .....+...+++ .|+|.+.+.+|.++......+.+..+...++
T Consensus 86 a~a~~~~--~~-~~f~~~~~aLf~~~~-~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~-- 159 (202)
T 3gha_A 86 SEEVWKE--DP-DSFWDFHEKLFEKQP-DTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKM-- 159 (202)
T ss_dssp HHHHHHH--CG-GGHHHHHHHHHHHCC-SSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHT--
T ss_pred HHHHHhh--CH-HHHHHHHHHHHHhCc-cccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHc--
Confidence 2343332 33 789999999887622 1110 234557788998 9999999999999888888887766666554
Q ss_pred CCceeeEEEECCeech--hhHHHHHHHHHHhccC
Q 040358 188 PLEYVPWVTVNNKALR--EDYEKFVEYVCGAYKG 219 (236)
Q Consensus 188 ~~~~VPwI~ING~~~~--~~~~nL~~~IC~~y~~ 219 (236)
++..+|+++|||+++. ...+.|.+.|=+..++
T Consensus 160 gV~gtPtfvvnG~~~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 160 NIQATPTIYVNDKVIKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp TCCSSCEEEETTEECSCTTCHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEECCEEecCCCCHHHHHHHHHHHHHh
Confidence 6899999999999864 3577888887766554
No 2
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=99.03 E-value=4.5e-09 Score=86.02 Aligned_cols=163 Identities=18% Similarity=0.200 Sum_probs=105.4
Q ss_pred CCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc--eeeEEEEeeecceeecCCCceeccCCchhhccChhhh
Q 040358 35 LPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS--IVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTIEA 112 (236)
Q Consensus 35 ~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d--~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~qa 112 (236)
...|..+.+|+|.+|..-.||+|.+|. ..+.+.+.+.+.+ .+.|.+.||.-. |+.-=...+.-.
T Consensus 4 ~~~G~~~a~~~i~~f~D~~Cp~C~~~~-~~l~~~l~~~~~~~~~v~~~~~~~p~~-------------~~~s~~aa~a~~ 69 (186)
T 3bci_A 4 ATTSSKNGKPLVVVYGDYKCPYCKELD-EKVMPKLRKNYIDNHKVEYQFVNLAFL-------------GKDSIVGSRASH 69 (186)
T ss_dssp -------CCCEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSSEEEEEECCCS-------------CTTHHHHHHHHH
T ss_pred cCcCCCCCCeEEEEEECCCChhHHHHH-HHHHHHHHHHhccCCeEEEEEEecCcC-------------CcchHHHHHHHH
Confidence 456778889999999999999999996 5677777544543 577888777521 111112223334
Q ss_pred hHhhhCCCCCCCchhhhhhhhcccCCCCCc--chhHHHHHHHHhcCCChhh---Hhhcc--cCchhHHHHHHHHhhhhhc
Q 040358 113 CAILAWPDQPKNHFDFIQCLENRTLRGPIR--DRKEAWLTCCKDLELSPNF---IKDCY--ESGIGRLLELKYGDETLHL 185 (236)
Q Consensus 113 Cai~~~~~~~~~~~~fI~Cm~~~~~~~~~~--~~~~~~~~Ca~~~g~d~~~---I~~C~--~~~~G~~Ll~~~~~~T~~l 185 (236)
|+...- |.++++|..=++.... ...+ .....+...+++.|+|.+. +.+|. ++.+....+.+.-+...++
T Consensus 70 ~a~~~~---~~~~~~~~~~lf~~~~-~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~ 145 (186)
T 3bci_A 70 AVLMYA---PKSFLDFQKQLFAAQQ-DENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDN 145 (186)
T ss_dssp HHHHHC---GGGHHHHHHHHHHTCC-CTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHhC---HHHHHHHHHHHHhcCc-ccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 444332 1568888887776521 1110 2345677889999999998 99999 8888777777765555554
Q ss_pred CCCCceeeEEEECCeech--hhHHHHHHHHHHhc
Q 040358 186 NPPLEYVPWVTVNNKALR--EDYEKFVEYVCGAY 217 (236)
Q Consensus 186 ~p~~~~VPwI~ING~~~~--~~~~nL~~~IC~~y 217 (236)
++..+|+++|||+.+. ...+.|.+.|=...
T Consensus 146 --gv~GtPt~vvnG~~~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 146 --HIKTTPTAFINGEKVEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp --TCCSSSEEEETTEECSCTTCHHHHHHHHHC--
T ss_pred --CCCCCCeEEECCEEcCCCCCHHHHHHHHHHHH
Confidence 7899999999999864 24677777765443
No 3
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=98.98 E-value=1e-09 Score=94.15 Aligned_cols=164 Identities=11% Similarity=0.097 Sum_probs=111.9
Q ss_pred CCCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhccc--ceeeEEEEeeecceeecCCCceeccCCchhhccC
Q 040358 31 GATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLI--SIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFN 108 (236)
Q Consensus 31 ~~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~--d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN 108 (236)
.++|...|..+.+|+|.+|..-.||+|++|. ..+.|.+.+++. +.+.|.+.+|.-. . .+ -.+-
T Consensus 28 ~~~~~~~G~~~A~vtIvef~Dy~CP~C~~~~-~~~~~~l~~~~~~~g~V~~v~~~~p~~-~----~s---------~~Aa 92 (226)
T 3f4s_A 28 LPNDKLLGDPKAPILMIEYASLTCYHCSLFH-RNVFPKIKEKYIDTGKMLYIFRHFPLD-Y----RG---------LKAA 92 (226)
T ss_dssp CTTCCEESCTTCSEEEEEEECTTCHHHHHHH-HHTHHHHHHHHTTTTSEEEEEEECCCS-H----HH---------HHHH
T ss_pred CCCCCccCCCCCCEEEEEEECCCCHHHHHHH-HHHHHHHHHHcccCCeEEEEEEeCCCC-h----hH---------HHHH
Confidence 4468889999999999999999999999996 457777754453 3455555544311 0 00 0011
Q ss_pred hhhhhHhhhCCCCCCCchhhhhhhhcccCCCCCc---chhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhh-
Q 040358 109 TIEACAILAWPDQPKNHFDFIQCLENRTLRGPIR---DRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLH- 184 (236)
Q Consensus 109 ~~qaCai~~~~~~~~~~~~fI~Cm~~~~~~~~~~---~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~- 184 (236)
+.-.|+ .+. .++|+|..=++.. ++.+.+ .....+...|+..|+|.+.+.+|.++.+....+.+..+...+
T Consensus 93 ~aa~aa----~~~-~~f~~~~~aLF~~-q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~ 166 (226)
T 3f4s_A 93 MLSHCY----EKQ-EDYFNFNKAVFNS-IDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINK 166 (226)
T ss_dssp HHGGGC----CSH-HHHHHHHHHHHHT-GGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh----hCh-HHHHHHHHHHHHh-CHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 111222 122 6788998888765 222210 244567789999999999999999998888887776666655
Q ss_pred cCCCCceeeEEEE---CCeech--hh--------HHHHHHHHHHhc
Q 040358 185 LNPPLEYVPWVTV---NNKALR--ED--------YEKFVEYVCGAY 217 (236)
Q Consensus 185 l~p~~~~VPwI~I---NG~~~~--~~--------~~nL~~~IC~~y 217 (236)
+ +++.+|+++| ||+.+. .. .+.|.+.|=...
T Consensus 167 ~--GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 167 L--GITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp H--CCCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred c--CCCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHH
Confidence 5 6899999999 999763 23 677777765543
No 4
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.97 E-value=1.5e-08 Score=81.76 Aligned_cols=158 Identities=13% Similarity=0.115 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCchhhccChh
Q 040358 31 GATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTI 110 (236)
Q Consensus 31 ~~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~ 110 (236)
.+.+...|..+.+|.|.+|+...||+|++|. ..|.+.+++ ..+ +.|.++++.-. |+.-=...+.
T Consensus 11 ~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~-~~l~~l~~~-~~~-v~~~~~~~p~~-------------~~~s~~aa~~ 74 (175)
T 3gyk_A 11 DPNAPVLGNPEGDVTVVEFFDYNCPYCRRAM-AEVQGLVDA-DPN-VRLVYREWPIL-------------GEGSDFAARA 74 (175)
T ss_dssp CTTSCEEECTTCSEEEEEEECTTCHHHHHHH-HHHHHHHHH-CTT-EEEEEEECCCS-------------CHHHHHHHHH
T ss_pred CCCCCCcCCCCCCEEEEEEECCCCccHHHHH-HHHHHHHHh-CCC-EEEEEEeCCCC-------------CCChHHHHHH
Confidence 4556778889999999999999999999997 567777763 555 66666665422 1111111222
Q ss_pred hhhHhhhCCCCCCCchhhhhhhhcccCCCCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCCCCc
Q 040358 111 EACAILAWPDQPKNHFDFIQCLENRTLRGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNPPLE 190 (236)
Q Consensus 111 qaCai~~~~~~~~~~~~fI~Cm~~~~~~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~ 190 (236)
-.|+.. . ..+++|..=++.. +..+ ....+...+++.|+|.+.+.+|.++.+....+.+..+...++ ++.
T Consensus 75 ~~~a~~----~-~~~~~~~~~lf~~-~~~~---~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~ 143 (175)
T 3gyk_A 75 ALAARQ----Q-GKYEAFHWALMGM-SGKA---NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKL--GFN 143 (175)
T ss_dssp HHHGGG----G-TCHHHHHHHHHTC-SSCC---SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHH--TCC
T ss_pred HHHHHH----H-hHHHHHHHHHHhc-CCCC---CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHc--CCc
Confidence 233332 2 4678887777665 2222 345567889999999999999999999999888877777665 689
Q ss_pred eeeEEEECCeechh--hHHHHHHHHHH
Q 040358 191 YVPWVTVNNKALRE--DYEKFVEYVCG 215 (236)
Q Consensus 191 ~VPwI~ING~~~~~--~~~nL~~~IC~ 215 (236)
.+|+++|||+.+.- ..+.|.+.|=+
T Consensus 144 gtPt~~i~g~~~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 144 GTPSFVVEDALVPGFVEQSQLQDAVDR 170 (175)
T ss_dssp SSSEEEETTEEECSCCCHHHHHHHHHH
T ss_pred cCCEEEECCEEeeCCCCHHHHHHHHHH
Confidence 99999999997532 45566655543
No 5
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=98.91 E-value=2.2e-09 Score=90.77 Aligned_cols=162 Identities=10% Similarity=0.108 Sum_probs=110.3
Q ss_pred CCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcc--cceeeEEEEeeecceeecCCCceeccCCchhhccCh
Q 040358 32 ATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGL--ISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNT 109 (236)
Q Consensus 32 ~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l--~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~ 109 (236)
.++..+|..+.+|+|.+|..-.||+|++|. ..+.|.+++++ .+.+.|.+.+|-- |+... .+-.
T Consensus 5 ~~~~~~G~~~a~vtivef~D~~Cp~C~~~~-~~~~~~l~~~~i~~g~v~~v~r~~pl-------------~~~s~-~aa~ 69 (205)
T 3gmf_A 5 DGHHLLGNPAAKLRLVEFVSYTCPHCSHFE-IESEGQLKIGMVQPGKGAIEVRNFVR-------------DPIDM-TVAL 69 (205)
T ss_dssp TTEEEESCTTCSEEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSEEEEEEECCC-------------SHHHH-HHHH
T ss_pred CCCceecCCCCCeEEEEEECCCCHHHHHHH-HHHHHHHHHHhccCCeEEEEEEeCCC-------------CcchH-HHHH
Confidence 345677889999999999999999999997 67889887445 3456666556521 11111 1112
Q ss_pred hhhhHhhhCCCCCCCchhhhhhhhcccCCCCCc-----ch--------------------hHHHHHHHHhcCCChhhHhh
Q 040358 110 IEACAILAWPDQPKNHFDFIQCLENRTLRGPIR-----DR--------------------KEAWLTCCKDLELSPNFIKD 164 (236)
Q Consensus 110 ~qaCai~~~~~~~~~~~~fI~Cm~~~~~~~~~~-----~~--------------------~~~~~~Ca~~~g~d~~~I~~ 164 (236)
.-.|+ .+ .++|+|..=++.. ++.+.. .. ...+...++..|+|.+.+.+
T Consensus 70 aa~~~-----~~-~~f~~~~~~Lf~~-q~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ia~~~~L~~~a~~~Gld~~~~~~ 142 (205)
T 3gmf_A 70 ITNCV-----PP-SRFFTLHTAFMRS-QAQWIGPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRSTLDR 142 (205)
T ss_dssp HHHHS-----CH-HHHHHHHHHHHHT-HHHHCHHHHHCCHHHHHTTSSSCHHHHHHHHHHHTTHHHHHHTTTCCHHHHHH
T ss_pred HHHhc-----CH-hHHHHHHHHHHHc-CHHHHhcccccchhhhhccccchhHHHHHhccCHHHHHHHHHHcCCCHHHHHH
Confidence 22232 22 7899999988875 221100 00 01245677889999999999
Q ss_pred cccCchhHHHHHHHHhhh-hhcCCCCceeeEEEECCeechh--hHHHHHHHHHHhc
Q 040358 165 CYESGIGRLLELKYGDET-LHLNPPLEYVPWVTVNNKALRE--DYEKFVEYVCGAY 217 (236)
Q Consensus 165 C~~~~~G~~Ll~~~~~~T-~~l~p~~~~VPwI~ING~~~~~--~~~nL~~~IC~~y 217 (236)
|.++......+.+..+.. .++ +++.+|+++|||+.+.- ..+.|.+.|=+..
T Consensus 143 ~l~s~~~~~~v~~~~~~a~~~~--GV~GtPtfvvng~~~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 143 CLSNEALAKKLAAETDEAINQY--NVSGTPSFMIDGILLAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHH--CCCSSSEEEETTEECTTCCSHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHHc--CCccCCEEEECCEEEeCCCCHHHHHHHHHHHh
Confidence 999988877777766665 554 68999999999998742 4677777775543
No 6
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.89 E-value=2.8e-08 Score=81.16 Aligned_cols=166 Identities=13% Similarity=0.073 Sum_probs=108.7
Q ss_pred CCcccccCCCCCCCCCCC-CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCC
Q 040358 23 PCSCVEYDGATNLPPPKH-NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHG 101 (236)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~-~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG 101 (236)
+.++..|..-..-..|.. +.+|+|.+|+...||+|..|. ..|.+..+ ++.+.+.++.+|+... .+.
T Consensus 5 ~~~g~~y~~~~~p~~g~~~~a~v~i~~f~d~~Cp~C~~~~-~~l~~l~~-~~~~~v~~~~~p~~~~----~~s------- 71 (193)
T 2rem_A 5 PVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFD-SKLQAWGA-RQAKDVRFTLVPAVFG----GVW------- 71 (193)
T ss_dssp CCBTTTEEECTTCCCSSCCTTCEEEEEEECTTCHHHHHHH-HHHHHHHH-TSCTTEEEEEEECCCS----TTH-------
T ss_pred ccCCCcceeccCCCCCCCCCCCeEEEEEECCCChhHhhhh-HHHHHHHH-hcCCceEEEEeCcccC----CCc-------
Confidence 445555543334455666 789999999999999999997 46666665 4666678888887421 010
Q ss_pred chhhccChhhhhHhhhCCCCCCCchhhhhhhhcccCC------CCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHH
Q 040358 102 EDECYFNTIEACAILAWPDQPKNHFDFIQCLENRTLR------GPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLE 175 (236)
Q Consensus 102 ~~EC~gN~~qaCai~~~~~~~~~~~~fI~Cm~~~~~~------~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll 175 (236)
+ ...+.-.|+.. . .++++|..-++...+. .+ .....+...+++.|+|.+.+.+|.++.+....+
T Consensus 72 --~-~a~~a~~~a~~----~-~~~~~~~~~lf~~~~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v 141 (193)
T 2rem_A 72 --D-PFARAYLAADV----L-GVAKRSHTAMFEAIHEKGSVPIQN--VGPDELAVFYAGYGVQPDRFVATFNGPEVEKRF 141 (193)
T ss_dssp --H-HHHHHHHHHHH----T-TCHHHHHHHHHHHHHTTCCSCSTT--CCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHH
T ss_pred --H-HHHHHHHHHHH----c-CcHHHHHHHHHHHHHHhcccCcCC--CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHH
Confidence 0 11122233322 2 4567777666553110 11 234567788999999999999999998888888
Q ss_pred HHHHhhhhhcCCCCceeeEEEECCeec-h-hhHHHHHHHH
Q 040358 176 LKYGDETLHLNPPLEYVPWVTVNNKAL-R-EDYEKFVEYV 213 (236)
Q Consensus 176 ~~~~~~T~~l~p~~~~VPwI~ING~~~-~-~~~~nL~~~I 213 (236)
.+..+....+ ++..+|+++|||+.. . ...+.|.+.|
T Consensus 142 ~~~~~~a~~~--gv~gtPt~ving~~~~~g~~~~~l~~~i 179 (193)
T 2rem_A 142 QAARAYALKV--RPVGTPTIVVNGRYMVTGHDFEDTLRIT 179 (193)
T ss_dssp HHHHHHHHHH--CCSSSSEEEETTTEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCeEEECCEEEecCCCHHHHHHHH
Confidence 7766665554 689999999999974 2 1344555444
No 7
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.86 E-value=1.4e-08 Score=83.21 Aligned_cols=154 Identities=16% Similarity=0.081 Sum_probs=103.6
Q ss_pred CCcccccCCCCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCc
Q 040358 23 PCSCVEYDGATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGE 102 (236)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~ 102 (236)
+.++..|..-.+-..|..+.+|.|.+|+...||+|.+|. ..|....+ .+.+.+.++.+|.... +.
T Consensus 3 ~~~g~~y~~~~~p~~g~~~~~~~i~~f~d~~Cp~C~~~~-~~l~~l~~-~~~~~v~~~~~p~~~~-------------~~ 67 (195)
T 2znm_A 3 LTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFD-PLLLKLGK-ALPSDAYLRTEHVVWQ-------------PE 67 (195)
T ss_dssp CCBTTTEEECSSCCCCSSSSSEEEEEEECTTSCCTTSSC-HHHHHHHH-HSCTTEEEEEEECCCS-------------GG
T ss_pred CCCCCcceEecCCCCCCCCCCcEEEEEECCCChhHHHHh-HHHHHHHH-HCCCceEEEEeccccC-------------cc
Confidence 345555544445567778889999999999999999996 45666555 3555677777775311 00
Q ss_pred hhhccChhhhhHhhhCCCCCCCchhhhhhhhcccC---CCCCcchhHHHHHHHHhc-CCChhhHhhcccCchhHHHHHHH
Q 040358 103 DECYFNTIEACAILAWPDQPKNHFDFIQCLENRTL---RGPIRDRKEAWLTCCKDL-ELSPNFIKDCYESGIGRLLELKY 178 (236)
Q Consensus 103 ~EC~gN~~qaCai~~~~~~~~~~~~fI~Cm~~~~~---~~~~~~~~~~~~~Ca~~~-g~d~~~I~~C~~~~~G~~Ll~~~ 178 (236)
.. ...+.-.|+.. . ..+++|..-++...+ ..+ .....+...+++. |+|.+.+.+|.++.+....+.+.
T Consensus 68 s~-~aa~a~~aa~~----~-~~~~~~~~~lf~~~~~~~~~~--~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~ 139 (195)
T 2znm_A 68 ML-GLARMAAAVNL----S-GLKYQANPAVFKAVYEQKIRL--ENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKM 139 (195)
T ss_dssp GH-HHHHHHHHHHH----H-TCHHHHHHHHHHHHHHCSSCT--TSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHH
T ss_pred cH-HHHHHHHHHHH----c-CcHHHHHHHHHHHHHHhCCCC--CCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHH
Confidence 10 11222233322 1 456777777765311 111 2345677889999 99999999999998888888876
Q ss_pred HhhhhhcCCCCceeeEEEECCee
Q 040358 179 GDETLHLNPPLEYVPWVTVNNKA 201 (236)
Q Consensus 179 ~~~T~~l~p~~~~VPwI~ING~~ 201 (236)
.+....+ ++..+|+++|||+.
T Consensus 140 ~~~a~~~--gv~gtPt~ving~~ 160 (195)
T 2znm_A 140 QKLTEQY--RIDSTPTVIVGGKY 160 (195)
T ss_dssp HHHHHHT--TCCSSSEEEETTTE
T ss_pred HHHHHHc--CCCCCCeEEECCEE
Confidence 6665554 68999999999996
No 8
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.85 E-value=2.1e-08 Score=80.78 Aligned_cols=152 Identities=15% Similarity=0.165 Sum_probs=94.6
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCchhhccChhhhhHhhhCC
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTIEACAILAWP 119 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~qaCai~~~~ 119 (236)
...+++|..|..-.||+|++|. ..+.+..+ ++.+.+.+.++|+--... . .. . ..-+..+++...
T Consensus 19 ~~~~~~vvEf~dy~Cp~C~~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~~-~-~~---------~-~~a~a~~~~~~~-- 82 (184)
T 4dvc_A 19 ASSSPVVSEFFSFYCPHCNTFE-PIIAQLKQ-QLPEGAKFQKNHVSFMGG-N-MG---------Q-AMSKAYATMIAL-- 82 (184)
T ss_dssp CCSSCEEEEEECTTCHHHHHHH-HHHHHHHH-TSCTTCEEEEEECSSSSG-G-GH---------H-HHHHHHHHHHHH--
T ss_pred CCCCCEEEEEECCCCHhHHHHh-HHHHHHHh-hcCCceEEEEEecCCCCC-c-hH---------H-HHHHHHHHHHHc--
Confidence 4567889999999999999996 55666665 577767777666532200 0 00 0 001112222221
Q ss_pred CCCCCchhhhhhhhcc---cCCCCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceeeEEE
Q 040358 120 DQPKNHFDFIQCLENR---TLRGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVPWVT 196 (236)
Q Consensus 120 ~~~~~~~~fI~Cm~~~---~~~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~ 196 (236)
..++.+..=++.. ..... .....+..=++..|+|.+.+++|.++.+-...+.+..+....+ +++.+|+++
T Consensus 83 ---~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gTPtfi 155 (184)
T 4dvc_A 83 ---EVEDKMVPVMFNRIHTLRKPP--KDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDS--GLTGVPAVV 155 (184)
T ss_dssp ---TCHHHHHHHHHHHHHTSCCCC--SSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHH--TCCSSSEEE
T ss_pred ---CcHHHHHHHHHHHHHHHhhcc--chHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHc--CCCcCCEEE
Confidence 1222222222111 01111 3445567788999999999999999988888888776666665 689999999
Q ss_pred ECCeech-----hhHHHHHHHHH
Q 040358 197 VNNKALR-----EDYEKFVEYVC 214 (236)
Q Consensus 197 ING~~~~-----~~~~nL~~~IC 214 (236)
|||+++. ...++|.+.|=
T Consensus 156 INGky~v~~~~~~s~e~~~~~i~ 178 (184)
T 4dvc_A 156 VNNRYLVQGQSAKSLDEYFDLVN 178 (184)
T ss_dssp ETTTEEECGGGCSSHHHHHHHHH
T ss_pred ECCEEeeCCcCCCCHHHHHHHHH
Confidence 9998641 14677777764
No 9
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.83 E-value=2.6e-08 Score=81.71 Aligned_cols=141 Identities=13% Similarity=0.049 Sum_probs=97.0
Q ss_pred CCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCchhhccChhhhhHhh
Q 040358 37 PPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTIEACAIL 116 (236)
Q Consensus 37 ~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~qaCai~ 116 (236)
.+..+.+|.|.+|+-..||+|++|. ..| +.+.+++.+.+.|+.+|.... +... ...+.-.|+..
T Consensus 20 ~~~~~~~~~i~~f~d~~Cp~C~~~~-~~l-~~l~~~~~~~v~~~~~p~~~~-------------~~~~-~aa~a~~aa~~ 83 (192)
T 3h93_A 20 PVSQPGKIEVVELFWYGCPHCYAFE-PTI-VPWSEKLPADVHFVRLPALFG-------------GIWN-VHGQMFLTLES 83 (192)
T ss_dssp CCSSTTSEEEEEEECTTCHHHHHHH-HHH-HHHHHTCCTTEEEEEEECCCS-------------THHH-HHHHHHHHHHH
T ss_pred ccCCCCCCEEEEEECCCChhHHHhh-HHH-HHHHHhCCCCeEEEEEehhhc-------------cchH-HHHHHHHHHHH
Confidence 3445789999999999999999996 344 444445777677877775311 1000 01112223322
Q ss_pred hCCCCCCCchhhhhhhhcccC---CCCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceee
Q 040358 117 AWPDQPKNHFDFIQCLENRTL---RGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVP 193 (236)
Q Consensus 117 ~~~~~~~~~~~fI~Cm~~~~~---~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VP 193 (236)
. .++++|..=++...+ ..+ .....+...++..|+|.+.+.+|.++.+....+.+..+...++ ++..+|
T Consensus 84 ----~-g~~~~~~~~lf~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtP 154 (192)
T 3h93_A 84 ----M-GVEHDVHNAVFEAIHKEHKKL--ATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAY--QVTGVP 154 (192)
T ss_dssp ----H-TCCHHHHHHHHHHHHTSCCCC--CSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHH--TCCSSS
T ss_pred ----c-CCHHHHHHHHHHHHHHhCcCC--CCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHh--CCCCCC
Confidence 1 456777777765411 111 2455678889999999999999999999988888877766665 689999
Q ss_pred EEEECCeec
Q 040358 194 WVTVNNKAL 202 (236)
Q Consensus 194 wI~ING~~~ 202 (236)
|++|||++.
T Consensus 155 t~~vng~~~ 163 (192)
T 3h93_A 155 TMVVNGKYR 163 (192)
T ss_dssp EEEETTTEE
T ss_pred eEEECCEEE
Confidence 999999974
No 10
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.77 E-value=2.1e-07 Score=76.37 Aligned_cols=166 Identities=10% Similarity=0.040 Sum_probs=103.8
Q ss_pred CCcccccCCCCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCc
Q 040358 23 PCSCVEYDGATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGE 102 (236)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~ 102 (236)
+.++..|..-..-..+....+|.|.+|+...||+|++|. ..|..+.+ .+.+.+.|..+|.... . +.
T Consensus 6 ~~~G~~y~~l~~~~~~~~~~~~~vv~f~d~~Cp~C~~~~-~~l~~l~~-~~~~~v~~~~~~~~~~-~---~s-------- 71 (195)
T 3hd5_A 6 AQGAQQYVNINPPMPSDTPGKIEVLEFFAYTCPHCAAIE-PMVEDWAK-TAPQDVVLKQVPIAFN-A---GM-------- 71 (195)
T ss_dssp -CCCCCCEECSSCCCCSSTTCEEEEEEECTTCHHHHHHH-HHHHHHHH-TCCTTEEEEEEECCSS-G---GG--------
T ss_pred cccCccceeccCCCcCCCCCCeEEEEEECCCCccHHHhh-HHHHHHHH-HCCCCeEEEEEecccC-c---ch--------
Confidence 455555432222223345689999999999999999996 34444443 5666677777776421 0 00
Q ss_pred hhhccChhhhhHhhhCCCCCCCchhhhhhhhccc---CCCCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHH
Q 040358 103 DECYFNTIEACAILAWPDQPKNHFDFIQCLENRT---LRGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYG 179 (236)
Q Consensus 103 ~EC~gN~~qaCai~~~~~~~~~~~~fI~Cm~~~~---~~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~ 179 (236)
=...+.-.|+... . +++|..=++... ...+ .....+...+++.|+|.+.+.+|.++.+....+.+..
T Consensus 72 --~~aa~a~~aa~~~-----g-~~~~~~~lf~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~ 141 (195)
T 3hd5_A 72 --KPLQQLYYTLQAL-----E-RPDLHPKVFTAIHTERKRL--FDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRAS 141 (195)
T ss_dssp --HHHHHHHHHHHHT-----T-CTTHHHHHHHHHHTSCCCC--CSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhc-----C-HHHHHHHHHHHHHHhccCC--CCHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHH
Confidence 0111222233221 2 445554444321 1111 2455677889999999999999999999888888877
Q ss_pred hhhhhcCCCCceeeEEEECCeechh-----hH-HHHHHHHH
Q 040358 180 DETLHLNPPLEYVPWVTVNNKALRE-----DY-EKFVEYVC 214 (236)
Q Consensus 180 ~~T~~l~p~~~~VPwI~ING~~~~~-----~~-~nL~~~IC 214 (236)
+...++ ++..+|+++|||++... .. +.|.++|=
T Consensus 142 ~~a~~~--gv~gtPt~ving~~~~~g~~~~~~~e~~~~~i~ 180 (195)
T 3hd5_A 142 QLAEAA--HIDGTPAFAVGGRYMTSPVLAGNDYAGALKVVD 180 (195)
T ss_dssp HHHHHT--TCCSSSEEEETTTEEECTTTTTGGGTTHHHHHH
T ss_pred HHHHHh--CCCcCceEEECCEEEeCccccCChHHHHHHHHH
Confidence 776665 78999999999997421 23 55655553
No 11
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.68 E-value=4e-07 Score=75.42 Aligned_cols=166 Identities=17% Similarity=0.129 Sum_probs=102.4
Q ss_pred CCcccccCCCCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCc
Q 040358 23 PCSCVEYDGATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGE 102 (236)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~ 102 (236)
+.+++.|..-.+-..+....+|.|..|+.-.||+|++|. ..| +-+.+++.+.+.|+.+|.... +.
T Consensus 5 ~~eG~~Y~~l~~p~~~~~~~~v~vv~f~d~~Cp~C~~~~-~~l-~~~~~~~~~~v~~~~~p~~~~-------------~~ 69 (193)
T 3hz8_A 5 LVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLE-PVL-SKHAKSFKDDMYLRTEHVVWQ-------------KE 69 (193)
T ss_dssp CCBTTTEEECSSCCCCSSTTSEEEEEEECTTCHHHHHHH-HHH-HHHHTTCCTTEEEEEEECCCS-------------GG
T ss_pred ccCCCCceecCCCcccCCCCCcEEEEEECCCChhHHHHH-HHH-HHHHHHCCCCeEEEEecCCCC-------------cc
Confidence 455555543333334445679999999999999999996 344 444445776677777776421 11
Q ss_pred hhhccChhhhhHhhhCCCCCCCchh--hhhhhhccc---CCCCCcchhHHHHHHHHhc-CCChhhHhhcccCchhHHHHH
Q 040358 103 DECYFNTIEACAILAWPDQPKNHFD--FIQCLENRT---LRGPIRDRKEAWLTCCKDL-ELSPNFIKDCYESGIGRLLEL 176 (236)
Q Consensus 103 ~EC~gN~~qaCai~~~~~~~~~~~~--fI~Cm~~~~---~~~~~~~~~~~~~~Ca~~~-g~d~~~I~~C~~~~~G~~Ll~ 176 (236)
.+ ...+.-.|+... ..+++ +..=++... ...+ .....+...+++. |+|.+.+.+|.++.+....+.
T Consensus 70 ~~-~aa~a~~aa~~~-----g~~~~~~~~~~lf~a~~~~~~~~--~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~ 141 (193)
T 3hz8_A 70 ML-TLARLAAAVDMA-----AADSKDVANSHIFDAMVNQKIKL--QNPEVLKKWLGEQTAFDGKKVLAAYESPESQARAD 141 (193)
T ss_dssp GH-HHHHHHHHHHHH-----TGGGHHHHHHHHHHHHHTSCCCT--TSHHHHHHHHHHCTTTTHHHHHHHHHSHHHHHHHH
T ss_pred cH-HHHHHHHHHHHc-----CchhHHhHHHHHHHHHHHhCcCC--CCHHHHHHHHHHccCCCHHHHHHHHcCHHHHHHHH
Confidence 10 111222333221 22333 433332210 1122 2345667888999 999999999999988888888
Q ss_pred HHHhhhhhcCCCCceeeEEEECCeechh--hHHHHHHHH
Q 040358 177 KYGDETLHLNPPLEYVPWVTVNNKALRE--DYEKFVEYV 213 (236)
Q Consensus 177 ~~~~~T~~l~p~~~~VPwI~ING~~~~~--~~~nL~~~I 213 (236)
+..+...++ +++.+|+++|||++... ..+.|.+.|
T Consensus 142 ~~~~~a~~~--gv~gtPt~vvng~~~~~~~~~e~l~~~i 178 (193)
T 3hz8_A 142 KMQELTETF--QIDGVPTVIVGGKYKVEFADWESGMNTI 178 (193)
T ss_dssp HHHHHHHHT--TCCSSSEEEETTTEEECCSSHHHHHHHH
T ss_pred HHHHHHHHh--CCCcCCEEEECCEEEecCCCHHHHHHHH
Confidence 776666654 68999999999997421 345555444
No 12
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=98.57 E-value=3.9e-07 Score=75.45 Aligned_cols=151 Identities=11% Similarity=0.020 Sum_probs=95.8
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCchhhccChhhhhHhhhCCC
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTIEACAILAWPD 120 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~qaCai~~~~~ 120 (236)
+.+|+|.+|..-.||+|++|. ..+.+.+++...+.+.|.+.+|.-. . |.... ....+++.....
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~-~~~~~~l~~~~~g~v~~v~r~~p~~------~-----h~~s~----~aaraa~aa~~~ 76 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAF-FKLDDLLAQAGEDNVTVRIRLQSQP------W-----HMFSG----VIVRCILAAATL 76 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHH-TTHHHHHHHHCTTTEEEEEEECCCT------T-----STTHH----HHHHHHHHHTTS
T ss_pred CCCEEEEEEECCCCHhHHHHH-HHHHHHHHHhCCCCEEEEEEEcCCC------C-----CccHH----HHHHHHHHHHHh
Confidence 679999999999999999997 6788888742255666666555321 0 21110 111122211111
Q ss_pred CC--CCchhhhhhhhcccCCCCC---------c--chhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCC
Q 040358 121 QP--KNHFDFIQCLENRTLRGPI---------R--DRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNP 187 (236)
Q Consensus 121 ~~--~~~~~fI~Cm~~~~~~~~~---------~--~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p 187 (236)
.+ .++|+|..-++.. ++.+. + +....+..-++.+|+|.+.+ .++++...-+++..+...++
T Consensus 77 ~~~~~~f~~~~~aLf~~-q~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~---l~~~~~~~~v~~~~~~a~~~-- 150 (182)
T 3gn3_A 77 EGGKESAKAVMTAVASH-REEFEFEHHAGGPNLDATPNDIIARIERYSGLALAEA---FANPELEHAVKWHTKYARQN-- 150 (182)
T ss_dssp TTHHHHHHHHHHHHHHT-GGGGSCBTTTBSGGGGCCHHHHHHHHHHHHTCCCHHH---HHCGGGHHHHHHHHHHHHHH--
T ss_pred ccChHHHHHHHHHHHhc-CcccccccccccccCCCCHHHHHHHHHHHhCCCHHHH---hcChHHHHHHHHHHHHHHHC--
Confidence 11 4689999998875 22220 0 23455678889999998776 45666666666554444444
Q ss_pred CCceeeEEEECCeech-----hhHHHHHHHH
Q 040358 188 PLEYVPWVTVNNKALR-----EDYEKFVEYV 213 (236)
Q Consensus 188 ~~~~VPwI~ING~~~~-----~~~~nL~~~I 213 (236)
++..+|+++|||+.+. ...+.+.+.|
T Consensus 151 GV~gtPtf~ing~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 151 GIHVSPTFMINGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp TCCSSSEEEETTEECTTCCTTSCHHHHHHHH
T ss_pred CCCccCEEEECCEEccCCCCCCCHHHHHHHh
Confidence 7899999999999863 2466666654
No 13
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.41 E-value=9.1e-07 Score=71.20 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=90.6
Q ss_pred CCCCCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcc--cceeeEEEEeeecceeecCCCceeccCCchhhccC
Q 040358 31 GATNLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGL--ISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFN 108 (236)
Q Consensus 31 ~~~~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l--~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN 108 (236)
..++..+|..+.+|+|.+|..-.||+|.+|. ..+.+.++ ++ .+.+.|.++||.-.. .. +. .++
T Consensus 16 ~~~~~~~G~~~a~v~i~~f~D~~Cp~C~~~~-~~~~~~~~-~~~~~~~v~~~~~~~~~~~----~~-----~~----~a~ 80 (175)
T 1z6m_A 16 TETGLHIGESNAPVKMIEFINVRCPYCRKWF-EESEELLA-QSVKSGKVERIIKLFDKEK----ES-----LQ----RGN 80 (175)
T ss_dssp SSSSEEESCTTCSEEEEEEECTTCHHHHHHH-HHHHHHHH-HHHHTTSEEEEEEECCCCS----TT-----TH----HHH
T ss_pred CCCCcccCCCCCCeEEEEEECCCCcchHHHH-HHHHHHHH-HHhhCCcEEEEEEeCCCCc----cc-----HH----HHH
Confidence 3446677888899999999999999999997 56777775 46 556788887775321 00 00 122
Q ss_pred hhhhhHhhhCCCCCCCchhhhhhhhcccCCCCCcchhHHHHHH-HHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCC
Q 040358 109 TIEACAILAWPDQPKNHFDFIQCLENRTLRGPIRDRKEAWLTC-CKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNP 187 (236)
Q Consensus 109 ~~qaCai~~~~~~~~~~~~fI~Cm~~~~~~~~~~~~~~~~~~C-a~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p 187 (236)
..+.|+.. .+. .++++|..=++... ..+.+.....+..- ++..|+|.+ . ....+.+..+....+
T Consensus 81 ~~~~~~~~--~~~-~~~~~~~~~lf~~~-~~~~~~~~~~l~~~a~~~~Gld~~------~---~~~~~~~~~~~a~~~-- 145 (175)
T 1z6m_A 81 VMHHYIDY--SAP-EQALSALHKMFATQ-DEWGNLTLEEVATYAEKNLGLKEQ------K---DATLVSAVIAEANAA-- 145 (175)
T ss_dssp HHHTTCCT--TCH-HHHHHHHHHHHHTH-HHHTTSCHHHHHHHHHHTSCCCCC------C---CHHHHHHHHHHHHHH--
T ss_pred HHHHHHHh--cCh-HHHHHHHHHHHHcC-hhhccCCHHHHHHHHHHhcCCCcc------c---CHHHHHHHHHHHHHc--
Confidence 23333211 223 56788887777641 11100112223333 456888764 1 122334433333333
Q ss_pred CCceeeEEEECCeechh--hHHHHHHHH
Q 040358 188 PLEYVPWVTVNNKALRE--DYEKFVEYV 213 (236)
Q Consensus 188 ~~~~VPwI~ING~~~~~--~~~nL~~~I 213 (236)
++..+|+++|||+.+.. ..+.|.+.|
T Consensus 146 gv~gtPt~vvng~~~~G~~~~~~l~~~i 173 (175)
T 1z6m_A 146 HIQFVPTIIIGEYIFDESVTEEELRGYI 173 (175)
T ss_dssp TCCSSCEEEETTEEECTTCCHHHHHHHH
T ss_pred CCCCcCeEEECCEEccCCCCHHHHHHHh
Confidence 68999999999998632 456666554
No 14
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=98.40 E-value=8e-07 Score=72.26 Aligned_cols=167 Identities=10% Similarity=0.001 Sum_probs=94.8
Q ss_pred CCCCC--CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceecc-CCchhhccChhhh
Q 040358 36 PPPKH--NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQ-HGEDECYFNTIEA 112 (236)
Q Consensus 36 ~~~~~--~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQ-HG~~EC~gN~~qa 112 (236)
.+|.. +.++.+..|+.-.||+|..|. ..|.+.+.+.+.+.+.++.++++.. ...+...-+ .-..+|.+...
T Consensus 9 ~lg~p~~~~~~~~ief~d~~CP~C~~~~-~~l~~~l~~~~~~~v~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~-- 82 (195)
T 3c7m_A 9 VLEKPIPNADKTLIKVFSYACPFCYKYD-KAVTGPVSEKVKDIVAFTPFHLETK---GEYGKQASEVFAVLINKDKAA-- 82 (195)
T ss_dssp ECSSCCSSCTTEEEEEECTTCHHHHHHH-HHTHHHHHHHTTTTCEEEEEECTTS---STTHHHHHHHHHHHHHHHHHT--
T ss_pred eccCCCCCCCcEEEEEEeCcCcchhhCc-HHHHHHHHHhCCCceEEEEEecCcc---ccccHHHHHHHHHHHHhhhhc--
Confidence 44544 556666678889999999986 5664666544666677777776532 000000000 00011211100
Q ss_pred hHhhhCCCCCCCchhhhhhhhccc---CCCCCcchhHHHHHH----HHhcCCChhhHhhcccCchhHHHHHHHHhhhhhc
Q 040358 113 CAILAWPDQPKNHFDFIQCLENRT---LRGPIRDRKEAWLTC----CKDLELSPNFIKDCYESGIGRLLELKYGDETLHL 185 (236)
Q Consensus 113 Cai~~~~~~~~~~~~fI~Cm~~~~---~~~~~~~~~~~~~~C----a~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l 185 (236)
.+...+.. ..+++|+.=++... ...+ .....+... ++..|+|.+.+.+|.++.+....+.+..+....+
T Consensus 83 -~~~~~~~~-~~~~~~~~~l~~a~~~~~~~~--~~~~~l~~~~~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~ 158 (195)
T 3c7m_A 83 -GISLFDAN-SQFKKAKFAYYAAYHDKKERW--SDGKDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLEKWKASYDVA 158 (195)
T ss_dssp -TCCTTSTT-CHHHHHHHHHHHHHHTSCCCT--TTTTCHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHGGGHHHHH
T ss_pred -CCCchhHH-HHHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHhHHHHcCCCHHHHHHHHcChHHHHHHHHHHHHHHHc
Confidence 00000011 23455555544321 1122 123345677 8999999999999999988887777765555444
Q ss_pred CCCCceeeEEEECCeec-h----hhHHHHHHHHH
Q 040358 186 NPPLEYVPWVTVNNKAL-R----EDYEKFVEYVC 214 (236)
Q Consensus 186 ~p~~~~VPwI~ING~~~-~----~~~~nL~~~IC 214 (236)
++..+||++|||++. . ...+.|.+.|=
T Consensus 159 --gv~gtPt~~ing~~~~~~~g~~~~~~l~~~i~ 190 (195)
T 3c7m_A 159 --KIQGVPAYVVNGKYLIYTKSIKSIDAMADLIR 190 (195)
T ss_dssp --HHHCSSEEEETTTEEECGGGCCCHHHHHHHHH
T ss_pred --CCCccCEEEECCEEEeccCCCCCHHHHHHHHH
Confidence 679999999999862 2 14566666653
No 15
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=98.34 E-value=4.2e-06 Score=69.43 Aligned_cols=137 Identities=15% Similarity=0.059 Sum_probs=87.0
Q ss_pred CceEEEEEEEecChhhHHHHHhhh--HHHHHhcccceeeEEEEeeecceeecCCCceecc-CCchhhccChhhhhHhhhC
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGL--GKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQ-HGEDECYFNTIEACAILAW 118 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL--~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQ-HG~~EC~gN~~qaCai~~~ 118 (236)
.+|+|..|..-.||+|++|. ..| .|.|.+.+.+.+.|.++|+.-. ...+..--+ .--++|.|.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~-~~l~~~~~l~~~~~~~v~~~~~~~~~~---~~~s~~aa~a~~aA~~~g~---------- 86 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFE-EVLHVSDNVKKKLPEGTKMTKYHVEFL---GPLGKELTQAWAVAMALGV---------- 86 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHH-HTSCHHHHHHHHSCTTCCEEEEECSSS---STTHHHHHHHHHHHHHHTC----------
T ss_pred CCCeEEEEECCCChhHHHhC-hhccchHHHHHhCCCCcEEEEEecccc---cccCHHHHHHHHHHHHcCc----------
Confidence 48899999999999999996 444 4677656776677777765421 001100000 001222221
Q ss_pred CCCCCCchhhhhhhhccc--CCCCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceeeEEE
Q 040358 119 PDQPKNHFDFIQCLENRT--LRGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVPWVT 196 (236)
Q Consensus 119 ~~~~~~~~~fI~Cm~~~~--~~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~ 196 (236)
..+|..=+.... ...+ .....+...++..|+|.+.+.+|.++.+....+.+..+...++ ++..+|+++
T Consensus 87 ------~~~~~~~lf~a~~~~~~~--~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPtfv 156 (191)
T 3l9s_A 87 ------EDKVTVPLFEAVQKTQTV--QSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADL--QLQGVPAMF 156 (191)
T ss_dssp ------HHHHHHHHHHHHHTSCCC--SSHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEE
T ss_pred ------HHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHh--CCcccCEEE
Confidence 112222221110 0012 2445677889999999999999999988888888766666654 789999999
Q ss_pred ECCeec
Q 040358 197 VNNKAL 202 (236)
Q Consensus 197 ING~~~ 202 (236)
|||++.
T Consensus 157 vnG~~~ 162 (191)
T 3l9s_A 157 VNGKYQ 162 (191)
T ss_dssp ETTTEE
T ss_pred ECCEEE
Confidence 999973
No 16
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.33 E-value=5e-06 Score=68.48 Aligned_cols=153 Identities=11% Similarity=0.003 Sum_probs=95.9
Q ss_pred CceEEEEEEEecChhhHHHHHhh-hHHHHHhcccceeeEEEEeeecceeecCCCceeccCCchhhccChhhhhHhhhCCC
Q 040358 42 DNVNLSLYYETLCPGCAEFISEG-LGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTIEACAILAWPD 120 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~q-L~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~qaCai~~~~~ 120 (236)
.++.|..|+--.||+|++|...- +.+.|.+.+.+.+.|..+|+.-. ...+ + ..-+.-.|+...
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~s---------~-~aa~a~~aA~~~--- 77 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL---GPLG---------H-ELTRAWALAMVM--- 77 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS---STTH---------H-HHHHHHHHHHHH---
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc---cccc---------H-HHHHHHHHHHHc---
Confidence 36789999999999999996332 34777655666677777776431 0011 0 011112233321
Q ss_pred CCCCchhhh----hhhhcccCCCCCcchhHHHHHHHHhc-CCChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceeeEE
Q 040358 121 QPKNHFDFI----QCLENRTLRGPIRDRKEAWLTCCKDL-ELSPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVPWV 195 (236)
Q Consensus 121 ~~~~~~~fI----~Cm~~~~~~~~~~~~~~~~~~Ca~~~-g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI 195 (236)
....+|. .=++.. .. + .....+...++.. |+|.+.+.+|.++.+....+.+..+...++ ++..+|++
T Consensus 78 --g~~~~~~~~lf~a~~~~-~~-~--~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~GtPt~ 149 (189)
T 3l9v_A 78 --KETDVIEKAFFTAGMVE-KR-L--HSPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVALQERLFKEY--GVRGTPSV 149 (189)
T ss_dssp --TCHHHHHHHHHHHHTTT-CC-C--CSHHHHHHHHHHHHCCCHHHHHHHTTSHHHHHHHHHHHHHHHHT--TCCSSSEE
T ss_pred --CcHHHHHHHHHHHHhhh-cc-C--CCHHHHHHHHHHccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHh--CCCccCEE
Confidence 1123333 222222 11 2 2345677889999 999999999999988888888776666554 68999999
Q ss_pred EECCeec--hh---h------HHHHHHHHHHhcc
Q 040358 196 TVNNKAL--RE---D------YEKFVEYVCGAYK 218 (236)
Q Consensus 196 ~ING~~~--~~---~------~~nL~~~IC~~y~ 218 (236)
+|||++. .. . .+.|.++|=....
T Consensus 150 ~vng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li~ 183 (189)
T 3l9v_A 150 YVRGRYHINNAAFGAFSVENFRSRYAAVVRKLLA 183 (189)
T ss_dssp EETTTEEECGGGCCCSSHHHHHHHHHHHHHHHHC
T ss_pred EECCEEEECccccccccccchHHHHHHHHHHHHh
Confidence 9999863 21 1 2667776655443
No 17
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=98.15 E-value=3e-05 Score=64.16 Aligned_cols=165 Identities=13% Similarity=0.149 Sum_probs=100.5
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHHHhcccc-eeeEEEEeeecceeecCC-------------------CceeccC-
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS-IVNLRLIPWGNAKIVEPN-------------------KTIDCQH- 100 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d-~vdl~lvP~G~a~~~~~~-------------------~~f~CQH- 100 (236)
++|+|++|+--.||.|..+ .++.+.+.+ +.+ .++|+++||+-....... .++.-..
T Consensus 6 ~~~~I~~f~D~~CP~C~~~--~~~~~~l~~-~~~~~v~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~a~~~g~~~~~~ 82 (216)
T 2in3_A 6 EKPVLWYIADPMCSWCWGF--APVIENIRQ-EYSAFLTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFE 82 (216)
T ss_dssp CCCEEEEEECTTCHHHHHH--HHHHHHHHH-HHTTTCEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCT
T ss_pred cceeEEEEECCCCchhhcc--hHHHHHHHh-cCCCCeEEEEeecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCccChH
Confidence 4689999999999999943 566666654 433 488999998743211000 0000000
Q ss_pred --CchhhccChhhhh-----HhhhCCCCCCCchhhhhhhhcccC---CCCCcchhHHHHHHHHhcCCChhhHhhcccCch
Q 040358 101 --GEDECYFNTIEAC-----AILAWPDQPKNHFDFIQCLENRTL---RGPIRDRKEAWLTCCKDLELSPNFIKDCYESGI 170 (236)
Q Consensus 101 --G~~EC~gN~~qaC-----ai~~~~~~~~~~~~fI~Cm~~~~~---~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~ 170 (236)
-+..=..|...++ +.... |.+.++|..-++...+ ..+ .....+...+++.|+|.+.+.+|.++.+
T Consensus 83 ~~~~~~~~~~s~~a~r~~~~a~~~~---~~~~~~~~~~lf~a~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~~~~ 157 (216)
T 2in3_A 83 NALPEGFIYDTEPACRGVVSVSLIE---PEKVFPFFAAIQRAFYVGQEDV--AQLAILKKLAVDLGIPESRFTPVFQSDE 157 (216)
T ss_dssp TCSCTTCBCCCHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHTTCCCT--TSHHHHHHHHHHTTCCHHHHHHHHHSHH
T ss_pred HHccCCcccCcHHHHHHHHHHHHhC---cchHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHcCCCHHHHHHHhcchH
Confidence 0111122333333 22211 1467788777765311 111 2345677889999999999999999988
Q ss_pred hHHHHHHHHhhhhhcCCCCceeeEEEE--CCee---ch--hhHHHHHHHHHHh
Q 040358 171 GRLLELKYGDETLHLNPPLEYVPWVTV--NNKA---LR--EDYEKFVEYVCGA 216 (236)
Q Consensus 171 G~~Ll~~~~~~T~~l~p~~~~VPwI~I--NG~~---~~--~~~~nL~~~IC~~ 216 (236)
....+.+..+....+ ++..+||++| ||++ +. ...+.|.+.|=+.
T Consensus 158 ~~~~v~~~~~~a~~~--gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 158 AKQRTLAGFQRVAQW--GISGFPALVVESGTDRYLITTGYRPIEALRQLLDTW 208 (216)
T ss_dssp HHHHHHHHHHHHHHT--TCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHH
Confidence 888887766665554 7899999998 9996 22 2355666655443
No 18
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=98.11 E-value=2.9e-05 Score=64.23 Aligned_cols=161 Identities=11% Similarity=0.057 Sum_probs=101.5
Q ss_pred eEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeee--cceeec---CCC----------------------ce
Q 040358 44 VNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWG--NAKIVE---PNK----------------------TI 96 (236)
Q Consensus 44 V~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G--~a~~~~---~~~----------------------~f 96 (236)
++|++|+.-.||+|.... ..|....+. +. ++|++.||- ...... ... ++
T Consensus 1 m~I~~~~D~~CP~cy~~~-~~l~~~~~~-~~--~~v~~~p~~L~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~a~~~G~ 76 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLAN-QRLSKLAQD-YG--LTIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGI 76 (203)
T ss_dssp CEEEEEECTTCHHHHHHH-HHHHHHHHH-HC--CEEEEEECCHHHHHHHHTCCSCCGGGCHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCCCHHHHHHH-HHHHHHHHH-cC--CeEEEEeeecchhhHhhCCCCcccccChHHHHHHHHHHHHHHHHcCC
Confidence 479999999999999885 456655553 43 677788872 110000 000 01
Q ss_pred eccCCchhhccChhhhhHhhhCC-CCCCCchhhhhhhhccc---CCCCCcchhHHHHHHHHhcCCChhhHhhcccCchhH
Q 040358 97 DCQHGEDECYFNTIEACAILAWP-DQPKNHFDFIQCLENRT---LRGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGR 172 (236)
Q Consensus 97 ~CQHG~~EC~gN~~qaCai~~~~-~~~~~~~~fI~Cm~~~~---~~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~ 172 (236)
.-.. +. ..|...+..+-..- .. .++++|..-++... ...+ .....+...+++.|+|.+.+.+|.++.+..
T Consensus 77 ~~~~-~~--~~~t~~a~r~~~~a~~~-g~~~~~~~~lf~a~~~~~~~i--~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~ 150 (203)
T 2imf_A 77 PLVF-PA--NYNSRRMNIGFYYSGAE-AQAAAYVNVVFNAVWGEGIAP--DLESLPALVSEKLGWDRSAFEHFLSSNAAT 150 (203)
T ss_dssp CCCC-CS--CCCCHHHHHHGGGCCSH-HHHHHHHHHHHHHHHHSCCCT--TCTTHHHHHHHHHTCCHHHHHHHHHSHHHH
T ss_pred CCCC-CC--CCChHHHHHHHHHHhCc-ChHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHcCCCHHHHHHHhcCHHHH
Confidence 1001 11 45555555433322 22 45677777766531 1122 234566788999999999999999998888
Q ss_pred HHHHHHHhhhhhcCCCCceeeEEEECCeech--hhHHHHHHHHHHh
Q 040358 173 LLELKYGDETLHLNPPLEYVPWVTVNNKALR--EDYEKFVEYVCGA 216 (236)
Q Consensus 173 ~Ll~~~~~~T~~l~p~~~~VPwI~ING~~~~--~~~~nL~~~IC~~ 216 (236)
..+.+..+...++ ++..|||++|||+.+. +..+.|.+.|-+.
T Consensus 151 ~~v~~~~~~a~~~--Gv~G~Ptfvi~g~~~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 151 ERYDEQTHAAIER--KVFGVPTMFLGDEMWWGNDRLFMLESAMGRL 194 (203)
T ss_dssp HHHHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCCcCCEEEECCEEEECCCCHHHHHHHHhcc
Confidence 8888766665554 7899999999999652 3466666666544
No 19
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.81 E-value=8.9e-05 Score=60.83 Aligned_cols=150 Identities=12% Similarity=0.064 Sum_probs=89.9
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCCCceeccCCchhhccChhhhhHhhhCCCC
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPNKTIDCQHGEDECYFNTIEACAILAWPDQ 121 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~~~f~CQHG~~EC~gN~~qaCai~~~~~~ 121 (236)
.++.|..|+.-.||+|++|- ..++.|.+.+ + +.|+.+|..- |+..+ ..-+.-..+....+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~--~~~~~~~~~~-~-v~~~~~p~~~-------------~~~~~-~aa~a~~Aa~~q~g~- 82 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNME--NFLPVISQEA-G-TDIGKMHITF-------------NQSAH-IASMFYYAAEMQVDG- 82 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHG--GGHHHHHHHH-T-SCCEEEECCS-------------SSHHH-HHHHHHHHHHTTSSS-
T ss_pred CCCEEEEEECCCChhHHHhh--HHHHHHHHHh-C-CeEEEEeccC-------------Cccch-HHHHHHHHHHHHhCC-
Confidence 58899999999999999994 4555554445 3 5666666431 11111 011111122111111
Q ss_pred CCCchhhhhhhhcccCCCCC---cchhHHHHHHHHhcCC-ChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceeeEEEE
Q 040358 122 PKNHFDFIQCLENRTLRGPI---RDRKEAWLTCCKDLEL-SPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVPWVTV 197 (236)
Q Consensus 122 ~~~~~~fI~Cm~~~~~~~~~---~~~~~~~~~Ca~~~g~-d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~I 197 (236)
..++++..-++...+.... ......+...+.+.|+ |.+.+.++.++ +....+.+..+...++ +++.+|+++|
T Consensus 83 -~~~~~~~~~lf~a~~~~~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~-~~~~~v~~~~~~a~~~--gv~GtPtfvv 158 (185)
T 3feu_A 83 -APDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRD-TLIKKVDNAKMLSEKS--GISSVPTFVV 158 (185)
T ss_dssp -SCCHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHH-HHHHHHHHHHHHHHHH--TCCSSSEEEE
T ss_pred -chHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHc--CCCccCEEEE
Confidence 1246776666654211100 0234557789999998 99999999876 5555666655555554 6899999999
Q ss_pred CCeec---h--hhHHHHHHHHH
Q 040358 198 NNKAL---R--EDYEKFVEYVC 214 (236)
Q Consensus 198 NG~~~---~--~~~~nL~~~IC 214 (236)
||++. . ...+.|.+.|=
T Consensus 159 ng~~~v~~~Ga~~~e~~~~~i~ 180 (185)
T 3feu_A 159 NGKYNVLIGGHDDPKQIADTIR 180 (185)
T ss_dssp TTTEEECGGGCSSHHHHHHHHH
T ss_pred CCEEEEecCCCCCHHHHHHHHH
Confidence 99973 1 24566666653
No 20
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=97.77 E-value=0.00035 Score=57.81 Aligned_cols=167 Identities=11% Similarity=0.097 Sum_probs=101.2
Q ss_pred eEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeecceeecCC-C------------------ceeccCCch-
Q 040358 44 VNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGNAKIVEPN-K------------------TIDCQHGED- 103 (236)
Q Consensus 44 V~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~a~~~~~~-~------------------~f~CQHG~~- 103 (236)
++|++|+.-.||.|-.+- ..|....+ .+.+.++|+++||+-....... + ++.-.....
T Consensus 3 ~~I~~~~D~~CP~cy~~~-~~l~~l~~-~~~~~v~v~~~p~~L~~~~~~~~~~~~~~~~~~~~~r~a~~~G~~f~~~~~~ 80 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYK-PTIEKLKQ-QLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWK 80 (208)
T ss_dssp EEEEEEECTTCHHHHHHH-HHHHHHHH-HSCTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred eEEEEEECCCCchhhhhh-HHHHHHHH-hCCCCceEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCcccHHHHh
Confidence 689999999999999664 44555554 4667799999998743110000 0 000000000
Q ss_pred --hhccChhhhhHhhh-CCCCCCCchhhhhhhhccc---CCCCCcchhHHHHHHHHhcCCChhhHhhcccCchhHHHHHH
Q 040358 104 --ECYFNTIEACAILA-WPDQPKNHFDFIQCLENRT---LRGPIRDRKEAWLTCCKDLELSPNFIKDCYESGIGRLLELK 177 (236)
Q Consensus 104 --EC~gN~~qaCai~~-~~~~~~~~~~fI~Cm~~~~---~~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~ 177 (236)
.=..|...++-+-. .... ...++|..-++... ...+ .....+...+++.|+|.+.+.+|.++.+....+.+
T Consensus 81 ~~~~~~~s~~a~r~~~aa~~~-g~~~~~~~~l~~a~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~ 157 (208)
T 3kzq_A 81 LCTPVRSTYQSCRAVIAAGFQ-DSYEQMLEAIQHAYYLRAMPP--HEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQD 157 (208)
T ss_dssp HSCCBCCCHHHHHHHHHHHTT-TCHHHHHHHHHHHHHTSCCCT--TCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHcCCCC--CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHH
Confidence 00123333332211 1122 44577777766421 1122 34556778999999999999999999988888888
Q ss_pred HHhhhhhcCCCCceeeEEEEC--Ceec----h-hhHHHHHHHHHHhc
Q 040358 178 YGDETLHLNPPLEYVPWVTVN--NKAL----R-EDYEKFVEYVCGAY 217 (236)
Q Consensus 178 ~~~~T~~l~p~~~~VPwI~IN--G~~~----~-~~~~nL~~~IC~~y 217 (236)
..+...++ ++..|||++|| |+.. + ...+.|.+.|=...
T Consensus 158 ~~~~a~~~--gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 158 QLSLAKSL--GVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHHT--TCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHc--CCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 77766654 78999999995 5432 1 13455666554443
No 21
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=97.60 E-value=0.00059 Score=58.34 Aligned_cols=169 Identities=11% Similarity=0.107 Sum_probs=109.2
Q ss_pred ceEEEEEEEecChhhHHHHHhhhHHHHHhccc--ceeeEEEEeeecceeecCCC--------------------------
Q 040358 43 NVNLSLYYETLCPGCAEFISEGLGKLFEKGLI--SIVNLRLIPWGNAKIVEPNK-------------------------- 94 (236)
Q Consensus 43 kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~--d~vdl~lvP~G~a~~~~~~~-------------------------- 94 (236)
|++|++|+.-.||.|--.. ..|....+ .+. .-++|++.||.-.-.....+
T Consensus 2 ~~~I~~~~D~~cPwcyig~-~~l~~a~~-~~~~~~~v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~ 79 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVGK-ARFEKALA-AFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNL 79 (239)
T ss_dssp CEEEEEEECSSCHHHHHHH-HHHHHHHH-TCTTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CeEEEEEEeCcCHhHHHHH-HHHHHHHH-hcCccCceEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHH
Confidence 6899999999999998664 56666665 353 46899999995210000000
Q ss_pred -------ceeccCCchhhccChhhhhHhhhC-CCCCCCchhhhhhhhcccC---CCCCcch-hHHHHHHHHhcCCChhhH
Q 040358 95 -------TIDCQHGEDECYFNTIEACAILAW-PDQPKNHFDFIQCLENRTL---RGPIRDR-KEAWLTCCKDLELSPNFI 162 (236)
Q Consensus 95 -------~f~CQHG~~EC~gN~~qaCai~~~-~~~~~~~~~fI~Cm~~~~~---~~~~~~~-~~~~~~Ca~~~g~d~~~I 162 (236)
++.=...+ .=..|...++-+-.. ... .+.++|+.=++...+ .++ .. ...+...+++.|+|.+.+
T Consensus 80 ~r~a~~~Gl~f~~~~-~~~~nt~~a~r~~~~A~~~-g~~~~~~~alf~a~~~~g~~i--~d~~~~L~~~a~~~Gld~~~~ 155 (239)
T 3gl5_A 80 GAQAAAEGLAYRTRD-RDHGSTFDLHRLLHLAKER-GRHEALLDAFYRGNFADERSV--FNDDERLVELAVGAGLDAEEV 155 (239)
T ss_dssp HHHHHHTTCCCCCSS-CEECCCHHHHHHHHHHHTT-TCHHHHHHHHHHHHHTCSSCC--SSCHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHcCCCccCCC-CCCCChHHHHHHHHHHHhh-CcHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHHcCCCHHHH
Confidence 11111110 012455555533221 223 567777777765311 122 34 567788999999999999
Q ss_pred hhcccC-chhHHHHHHHHhhhhhcCCCCceeeEEEECCee-c-h-hhHHHHHHHHHHhccC
Q 040358 163 KDCYES-GIGRLLELKYGDETLHLNPPLEYVPWVTVNNKA-L-R-EDYEKFVEYVCGAYKG 219 (236)
Q Consensus 163 ~~C~~~-~~G~~Ll~~~~~~T~~l~p~~~~VPwI~ING~~-~-~-~~~~nL~~~IC~~y~~ 219 (236)
.++.++ .+..+.+++..++..++ ++..|||++|||++ + + ...+.|.+.|=+....
T Consensus 156 ~~~l~s~~~~~~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 156 RAVLADPAAYADEVRADEREAAQL--GATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHCTTTTHHHHHHHHHHHHHT--TCCSSSEEEETTTEEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCcHhHHHHHHHHHHHHHHC--CCCeeCeEEECCcEeecCCCCHHHHHHHHHHHHhh
Confidence 999999 88888888876666554 78999999999985 3 2 2466777777666554
No 22
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=97.46 E-value=0.00051 Score=56.89 Aligned_cols=165 Identities=14% Similarity=0.156 Sum_probs=101.0
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEee--ecceeecCCC-----------------------c
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPW--GNAKIVEPNK-----------------------T 95 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~--G~a~~~~~~~-----------------------~ 95 (236)
+.+++|++|+--.||.|--.. ..|....+. . -++|++.|| |.......+. +
T Consensus 2 ~~~~~I~~~~D~~cPwcyi~~-~~l~~~~~~-~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~k~~~~~~~~~r~a~~~G 77 (202)
T 3fz5_A 2 NAMNPIEFWFDFSSGYAFFAA-QRIEALAAE-L--GRTVLWRPYMLGAAFSVTGARGLSSTPLKRDYAQRDWARIARQRG 77 (202)
T ss_dssp -CCSCEEEEECTTCHHHHHHH-TTHHHHHHH-H--TCCEEEEECTTC----------CCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceeEEEEeCCCHHHHHHH-HHHHHHHHH-h--CCeEEEEeeeccchhhhcCCCCcccCcHHHHHHHHHHHHHHHHhC
Confidence 346789999999999998764 456655542 3 377888887 3221100000 0
Q ss_pred eeccCCchhhccChhhhhHhhhC-CCC-CCCchhhhhhhhcccC---CCCCcchhHHHHHHHHhcCCChhhHhhcccCch
Q 040358 96 IDCQHGEDECYFNTIEACAILAW-PDQ-PKNHFDFIQCLENRTL---RGPIRDRKEAWLTCCKDLELSPNFIKDCYESGI 170 (236)
Q Consensus 96 f~CQHG~~EC~gN~~qaCai~~~-~~~-~~~~~~fI~Cm~~~~~---~~~~~~~~~~~~~Ca~~~g~d~~~I~~C~~~~~ 170 (236)
+.-.. +..=-.|...++-+-.. ... |.+..+++.-++...+ ..+ .....+...+++.|+|.+.+.++.++++
T Consensus 78 ~~f~~-~~~~~~~t~~a~r~~~~a~~~g~~~~~~~~~alf~a~~~~g~~i--~~~~~L~~~a~~~Gld~~~~~~~~~s~~ 154 (202)
T 3fz5_A 78 LTFRP-PADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLYFSDRLDT--ASPEAVSRLGPEVGLEPEALLAGIADPA 154 (202)
T ss_dssp CCCCC-CTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCCCT--TCHHHHHTTHHHHTCCHHHHHHHTTCHH
T ss_pred CCCCC-CCCCCCChHHHHHHHHHHHhhCchHHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHcCCCHHHHHHHhcCHH
Confidence 11111 11111255555432211 111 1256777777665311 111 3456678899999999999999999999
Q ss_pred hHHHHHHHHhhhhhcCCCCceeeEEEECCeec-h-hhHHHHHHHHH
Q 040358 171 GRLLELKYGDETLHLNPPLEYVPWVTVNNKAL-R-EDYEKFVEYVC 214 (236)
Q Consensus 171 G~~Ll~~~~~~T~~l~p~~~~VPwI~ING~~~-~-~~~~nL~~~IC 214 (236)
..+.+++..++..++ ++..|||++|||+.. + +.++.|.+.+-
T Consensus 155 ~~~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~~G~~~~~~l~~~l~ 198 (202)
T 3fz5_A 155 LKETVRKIGEDAVAR--GIFGSPFFLVDDEPFWGWDRMEMMAEWIR 198 (202)
T ss_dssp HHHHHHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCCcCCEEEECCEEEecCCCHHHHHHHHh
Confidence 999888877776665 789999999999975 2 34666666553
No 23
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=97.10 E-value=0.0025 Score=53.42 Aligned_cols=173 Identities=15% Similarity=0.082 Sum_probs=99.8
Q ss_pred ceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEee--ecceeecCC-----------------------Ccee
Q 040358 43 NVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPW--GNAKIVEPN-----------------------KTID 97 (236)
Q Consensus 43 kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~--G~a~~~~~~-----------------------~~f~ 97 (236)
+++|++|+--.||.|..+. ..|....+ .. -++|++.|| |.......+ .++.
T Consensus 5 ~~~I~~~~D~~CP~Cy~~~-~~l~~l~~-~~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~G~~ 80 (226)
T 1r4w_A 5 PRVLELFYDVLSPYSWLGF-EVLCRYQH-LW--NIKLKLRPALLAGIMKDSGNQPPAMVPHKGQYILKEIPLLKQLFQVP 80 (226)
T ss_dssp CEEEEEEECTTCHHHHHHH-HHHHHHTT-TS--SEEEEEEECCHHHHHHHTTCCCTTSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred CceEEEEEeCCChHHHHHH-HHHHHHHH-Hc--CCeEEEEeeecccchhccCCCCcccChHHHHHHHHHHHHHHHHhCCC
Confidence 5899999999999998774 44444332 23 377888887 211000000 0011
Q ss_pred ccCCch--hh--ccChhhhhHhhhC-CC-CCCCchhhhhhhhcccC---CCCCcchhHHHHHHHHhcCCCh---hhHhhc
Q 040358 98 CQHGED--EC--YFNTIEACAILAW-PD-QPKNHFDFIQCLENRTL---RGPIRDRKEAWLTCCKDLELSP---NFIKDC 165 (236)
Q Consensus 98 CQHG~~--EC--~gN~~qaCai~~~-~~-~~~~~~~fI~Cm~~~~~---~~~~~~~~~~~~~Ca~~~g~d~---~~I~~C 165 (236)
-...+. .. ..|...+..+-.. .. .+.++++|..=++...+ ..+ .....+...+++.|+|. +.+.+|
T Consensus 81 ~~~~~~~~~~~~~~~s~~a~r~~~aa~~~g~~~~~~~~~alf~a~~~~~~~i--~~~~~L~~~a~~~Gl~~~d~~~~~~~ 158 (226)
T 1r4w_A 81 MSVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDI--TESQNILSAAEKAGMATAQAQHLLNK 158 (226)
T ss_dssp CCCCSSTTTHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCC--SSHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred CCCCCccccccCCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHcCCCchhHHHHHHH
Confidence 111000 00 1133333222111 00 11345777766654311 122 23456778999999965 477788
Q ss_pred ccCchhHHHHHHHHhhhhhcCCCCceeeEEEEC----Ceec-h-hhHHHHHHHHHHhccCCCCCC
Q 040358 166 YESGIGRLLELKYGDETLHLNPPLEYVPWVTVN----NKAL-R-EDYEKFVEYVCGAYKGGHVPE 224 (236)
Q Consensus 166 ~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~IN----G~~~-~-~~~~nL~~~IC~~y~~~~~P~ 224 (236)
.++.+....+.+..++..++ ++..|||++|| |+.+ + +.++.|.+.+=..+.| +.|.
T Consensus 159 ~~s~~~~~~v~~~~~~a~~~--gv~G~Ptfvv~~~g~~~~~~G~~~~~~l~~~l~~~~~~-~~~~ 220 (226)
T 1r4w_A 159 ISTELVKSKLRETTGAACKY--GAFGLPTTVAHVDGKTYMLFGSDRMELLAYLLGEKWMG-PVPP 220 (226)
T ss_dssp TTSHHHHHHHHHHHHHHHHT--TCCSSCEEEEEETTEEEEEESTTCHHHHHHHHTCCCCC-SSCC
T ss_pred cCCHHHHHHHHHHHHHHHHC--CCCCCCEEEEeCCCCcCceeCCCcHHHHHHHhcCcccC-CCCc
Confidence 88988888888776666554 78999999999 7764 2 3467777777777776 4443
No 24
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=96.49 E-value=0.027 Score=47.71 Aligned_cols=173 Identities=14% Similarity=0.077 Sum_probs=99.8
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEee--ecceeec---CCC--------------------ce
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPW--GNAKIVE---PNK--------------------TI 96 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~--G~a~~~~---~~~--------------------~f 96 (236)
.+.+|++|+.-.||.|--.. ..|....+ .+ -++|++.|| |..-... ... ++
T Consensus 4 ~~~~I~~~~D~~CPwcyi~~-~~L~~~~~-~~--~v~v~~~p~~L~~~~~~~g~~~~~~~~~k~~y~~~~~~r~a~~~G~ 79 (234)
T 3rpp_A 4 LPRTVELFYDVLSPYSWLGF-EILCRYQN-IW--NINLQLRPSLITGIMKDSGNKPPGLLPRKGLYMANDLKLLRHHLQI 79 (234)
T ss_dssp CCEEEEEEECTTCHHHHHHH-HHHHHHTT-TS--SEEEEEEECCHHHHCC----CCCSSSCHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEEeCCCHHHHHHH-HHHHHHHH-Hc--CCeEEEEEeecchhhhhcCCCCcccChHHHHHHHHHHHHHHHHhCC
Confidence 56899999999999998654 34443332 22 378999998 3210000 000 11
Q ss_pred eccCCc--hh--hccChhhhhHhhhC-C-CCCCCchhhhhhhhccc---CCCCCcchhHHHHHHHHhcCCCh---hhHhh
Q 040358 97 DCQHGE--DE--CYFNTIEACAILAW-P-DQPKNHFDFIQCLENRT---LRGPIRDRKEAWLTCCKDLELSP---NFIKD 164 (236)
Q Consensus 97 ~CQHG~--~E--C~gN~~qaCai~~~-~-~~~~~~~~fI~Cm~~~~---~~~~~~~~~~~~~~Ca~~~g~d~---~~I~~ 164 (236)
.-...+ .. -..|...++-+-.. . ..+.+..+++.=++..- ...+ .....+...+++.|+|. +.+.+
T Consensus 80 ~f~~~~~~~~~~~~~nt~~a~r~~~aa~~~~~~~~~~~~~al~~A~~~~g~di--~d~~~L~~~a~~~GLd~~~~~~~l~ 157 (234)
T 3rpp_A 80 PIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDI--TEPQSILAAAEKAGMSAEQAQGLLE 157 (234)
T ss_dssp CCCCCSSCHHHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCC--SSHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred CCCCCCCCcccccCCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 111100 00 00144444332211 0 01145566666665321 1122 34567789999999999 44555
Q ss_pred cccCchhHHHHHHHHhhhhhcCCCCceeeEEEEC--Ce-e-c-h-hhHHHHHHHHHHhccCCCCC
Q 040358 165 CYESGIGRLLELKYGDETLHLNPPLEYVPWVTVN--NK-A-L-R-EDYEKFVEYVCGAYKGGHVP 223 (236)
Q Consensus 165 C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~IN--G~-~-~-~-~~~~nL~~~IC~~y~~~~~P 223 (236)
-+++.+..+.+++..++..++ ++..|||++|| |+ . . + +.++.|...+=..+.| +.|
T Consensus 158 ~~~s~~~~~~l~~~~~~a~~~--Gv~GvPtfvv~~~g~~~~f~G~drl~~l~~~L~~~~~~-p~~ 219 (234)
T 3rpp_A 158 KIATPKVKNQLKETTEAACRY--GAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMG-PIP 219 (234)
T ss_dssp TTTSHHHHHHHHHHHHHHHHT--TCSSSCEEEEEETTEEEEEESSSCHHHHHHHHTCCCCC-SSC
T ss_pred HccCHHHHHHHHHHHHHHHHc--CCCCCCEEEEeCCCCcCceeCccCHHHHHHHhccccCC-CCC
Confidence 567888888888877776665 78999999995 75 2 2 3 3466777777666776 344
No 25
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=96.07 E-value=0.0078 Score=49.89 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=47.9
Q ss_pred hhHHHHHHHHhcCCChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceeeEEEECCeec
Q 040358 144 RKEAWLTCCKDLELSPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVPWVTVNNKAL 202 (236)
Q Consensus 144 ~~~~~~~Ca~~~g~d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~ING~~~ 202 (236)
....+...+...|+|.+.+.+|.++.+....+.+..+....+ +++.||+++|||++.
T Consensus 5 d~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~--gi~gvP~fvingk~~ 61 (197)
T 1un2_A 5 SASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADV--QLRGVPAMFVNGKYQ 61 (197)
T ss_dssp SHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETTTEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHc--CCCcCCEEEEcceEe
Confidence 445677889999999999999999998888888876666554 678999999999974
No 26
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=93.11 E-value=0.15 Score=43.13 Aligned_cols=46 Identities=22% Similarity=0.419 Sum_probs=36.6
Q ss_pred CCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeee
Q 040358 36 PPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWG 85 (236)
Q Consensus 36 ~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G 85 (236)
..|..+.++.|.+|.-..||+|++|. .+|.+.+++ +.+.|+++||+
T Consensus 91 ~~G~~~ak~~v~~F~D~~Cp~C~~~~-~~l~~~~~~---g~v~v~~~~~p 136 (241)
T 1v58_A 91 LDGKKDAPVIVYVFADPFCPYCKQFW-QQARPWVDS---GKVQLRTLLVG 136 (241)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHH-HHHHHHHHT---TSEEEEEEECC
T ss_pred eECCCCCCeEEEEEECCCChhHHHHH-HHHHHHHhC---CcEEEEEEECC
Confidence 45677789999999999999999997 567776653 35777888875
No 27
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=87.54 E-value=0.53 Score=41.28 Aligned_cols=41 Identities=20% Similarity=0.423 Sum_probs=33.4
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeeec
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWGN 86 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G~ 86 (236)
.+.+..|.+|.--.||+|+++. .+|.+.+++ +++++++|+.
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~-~~l~~~l~~-----~~Vr~i~~Pi 185 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKEL-TKLRDHLKE-----NTVRMVVVGW 185 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHH-HTHHHHHHH-----CEEEEEECCC
T ss_pred CCCCeEEEEEECcCChhHHHHH-HHHHHHhhC-----CcEEEEEeec
Confidence 4578899999999999999997 578876642 6788888774
No 28
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=86.18 E-value=1.2 Score=36.54 Aligned_cols=44 Identities=16% Similarity=0.483 Sum_probs=31.9
Q ss_pred CCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeee
Q 040358 37 PPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWG 85 (236)
Q Consensus 37 ~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G 85 (236)
.|..+.++.|.+|+-..||+|++|. ..|.+ +.+ . + +.++++.|.
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~-~~l~~-~~~-~-~-v~v~~~~~p 124 (211)
T 1t3b_A 81 YPAKNEKHVVTVFMDITCHYCHLLH-QQLKE-YND-L-G-ITVRYLAFP 124 (211)
T ss_dssp ECCTTCSEEEEEEECTTCHHHHHHH-TTHHH-HHH-T-T-EEEEEEECC
T ss_pred ecCCCCCEEEEEEECCCCHhHHHHH-HHHHH-HHh-C-C-cEEEEEECC
Confidence 3555779999999999999999997 45666 332 1 3 666666554
No 29
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=82.81 E-value=1.9 Score=35.32 Aligned_cols=45 Identities=9% Similarity=0.226 Sum_probs=32.0
Q ss_pred CCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeee
Q 040358 36 PPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWG 85 (236)
Q Consensus 36 ~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G 85 (236)
..|..+.++.|.+|+-.-||+|+++. ..|....+ . -+.+.++.|.
T Consensus 80 ~~g~~~~k~~vv~F~d~~Cp~C~~~~-~~l~~l~~-~---~v~v~~~~~p 124 (216)
T 1eej_A 80 VYKAPQEKHVITVFTDITCGYCHKLH-EQMADYNA-L---GITVRYLAFP 124 (216)
T ss_dssp EECCTTCCEEEEEEECTTCHHHHHHH-TTHHHHHH-T---TEEEEEEECC
T ss_pred eecCCCCCEEEEEEECCCCHHHHHHH-HHHHHHHh-C---CcEEEEEECC
Confidence 44666789999999999999999997 45555433 1 3566665553
No 30
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=77.50 E-value=2.3 Score=28.33 Aligned_cols=36 Identities=17% Similarity=0.453 Sum_probs=24.0
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeE
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNL 79 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl 79 (236)
.+|.|.+|+.+-||+|+++. ..|....+ ++.+.+.+
T Consensus 2 ~~~~vv~f~~~~C~~C~~~~-~~l~~~~~-~~~~~~~~ 37 (85)
T 1fo5_A 2 SKVKIELFTSPMCPHCPAAK-RVVEEVAN-EMPDAVEV 37 (85)
T ss_dssp CCEEEEEEECCCSSCCCTHH-HHHHHHHH-HCSSSEEE
T ss_pred CceEEEEEeCCCCCchHHHH-HHHHHHHH-HcCCceEE
Confidence 36889999999999999885 34444333 34433333
No 31
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=77.45 E-value=1.7 Score=33.91 Aligned_cols=40 Identities=18% Similarity=0.409 Sum_probs=28.1
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEeee
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPWG 85 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~G 85 (236)
..+.++.|.+|.--.||+|++|.. . ++ ++.+ +.|.++.|.
T Consensus 11 ~~~a~~~vv~f~D~~Cp~C~~~~~-~----l~-~l~~-v~v~~~~~P 50 (147)
T 3gv1_A 11 RGNGKLKVAVFSDPDCPFCKRLEH-E----FE-KMTD-VTVYSFMMP 50 (147)
T ss_dssp ETTCCEEEEEEECTTCHHHHHHHH-H----HT-TCCS-EEEEEEECC
T ss_pred cCCCCEEEEEEECCCChhHHHHHH-H----Hh-hcCc-eEEEEEEcc
Confidence 456789999999999999999863 3 33 3533 555555444
No 32
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=65.67 E-value=11 Score=27.73 Aligned_cols=44 Identities=5% Similarity=-0.065 Sum_probs=30.0
Q ss_pred CCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 37 PPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 37 ~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
+.....|+.|-.|+-+-||.|+..+ ..|...++ ++.+. +++++-
T Consensus 27 l~~~~gk~vll~F~a~wC~~C~~~~-~~l~~l~~-~~~~~-~~~vv~ 70 (143)
T 4fo5_A 27 FHNQLGRYTLLNFWAAYDAESRARN-VQLANEVN-KFGPD-KIAMCS 70 (143)
T ss_dssp SCCSSCCEEEEEEECTTCHHHHHHH-HHHHHHHT-TSCTT-TEEEEE
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHH-HHHHHHHH-HhCcC-CEEEEE
Confidence 3334557889999999999999887 45666665 35543 455543
No 33
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=64.03 E-value=14 Score=25.25 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=23.7
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccce
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISI 76 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~ 76 (236)
..+..|..||.+-||+|+.+. ..+....+ .+.+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~~ 51 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIA-PVLEELAA-DYEGK 51 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHH-HHHHHHHH-HTTTT
T ss_pred cCCcEEEEEECCCCHHHHHHh-HHHHHHHH-HhcCC
Confidence 567788899999999999985 34444443 35543
No 34
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=62.09 E-value=3.2 Score=27.56 Aligned_cols=19 Identities=32% Similarity=0.677 Sum_probs=16.7
Q ss_pred ceEEEEEEEecChhhHHHH
Q 040358 43 NVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 43 kV~V~vyyESlCPd~~~Fi 61 (236)
.|+|.+|+.+-||.|+++.
T Consensus 2 m~~vv~f~~~~C~~C~~~~ 20 (85)
T 1nho_A 2 VVNIEVFTSPTCPYCPMAI 20 (85)
T ss_dssp CCCEEEESCSSSCCSTTHH
T ss_pred eEEEEEEECCCCcchHHHH
Confidence 4688999999999999885
No 35
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=61.70 E-value=17 Score=24.94 Aligned_cols=34 Identities=15% Similarity=0.285 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...++.|..||..-||.|+.+. ..|....+ .+.+
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 51 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIA-PILDEIAD-EYQG 51 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred hcCCeEEEEEECCCCHhHHHHH-HHHHHHHH-HhCC
Confidence 3457788899999999999885 33444433 3443
No 36
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=61.66 E-value=18 Score=26.39 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=23.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++-|..||-+-||+|+++. ..|..+.+ .+.+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~-~~~~~~~~-~~~~ 82 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVA-PILEELSK-EYAG 82 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHH-HHHHHHHH-HTTT
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HhcC
Confidence 568888899999999999985 34444443 3554
No 37
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=61.18 E-value=6.8 Score=31.78 Aligned_cols=42 Identities=17% Similarity=0.267 Sum_probs=30.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhH---HHHHhcccceeeEEEEee
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLG---KLFEKGLISIVNLRLIPW 84 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~---P~~~~~l~d~vdl~lvP~ 84 (236)
..++.|..|+---||+|++|- ..+ +.+.+.+.+.+.|..+|.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~--p~~~~~~~l~~~~~~~v~~~~~~v 156 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFE--EVLHISDNVKKKLPEGVKMTKYHV 156 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHH--HTSCHHHHHTTSSCTTCCEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhC--cccccHHHHHHHCCCCCEEEEecc
Confidence 457889999999999999994 344 445445666667777665
No 38
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=60.54 E-value=12 Score=27.09 Aligned_cols=36 Identities=14% Similarity=0.326 Sum_probs=25.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceee
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVN 78 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vd 78 (236)
..|+.|..|+-+-||.|+.++ ..|....+ ++.+.+.
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~-~~l~~l~~-~~~~~~~ 63 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAM-PQVNEFRD-KYQDQLN 63 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH-HHTTTSE
T ss_pred CCCEEEEEEEcCCCHHHHHHh-HHHHHHHH-HhcCCcE
Confidence 457788888999999999886 45665554 3554433
No 39
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=60.53 E-value=14 Score=25.54 Aligned_cols=34 Identities=9% Similarity=0.203 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...++.|..||..-||+|+.+. ..|....+ .+.+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 56 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMS-PLINLAAN-TYSD 56 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHH-HHHHHHHH-HTTT
T ss_pred cCCceEEEEEECCCCHHHHHhH-HHHHHHHH-HhCC
Confidence 3567788899999999999885 34443333 3443
No 40
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=60.06 E-value=16 Score=25.01 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=22.3
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||.|+.+. ..+....+ .+.+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 48 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMA-PVLEEFAE-AHAD 48 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HSTT
T ss_pred CCCcEEEEEECCCCHHHHHHH-HHHHHHHH-HhcC
Confidence 346778889999999999885 33433333 3443
No 41
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=59.80 E-value=19 Score=24.57 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=23.2
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...+..|..||..-||.|+.+. ..+..+.+ .+.+
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 51 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIG-PALGEIGK-EFAG 51 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHH-HHHHHHHH-HHTT
T ss_pred hCCCEEEEEEECCCChhHHHHh-HHHHHHHH-HhCC
Confidence 3467788889999999999885 34443333 3443
No 42
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=59.72 E-value=18 Score=24.65 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=22.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..+..|..||..-||+|+.+. ..|....+ .+.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 49 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIA-PILEEIAK-EYEG 49 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTBT
T ss_pred CCCeEEEEEECCCCHHHHHhh-HHHHHHHH-HhhC
Confidence 356778889999999999986 34444443 3443
No 43
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=59.62 E-value=10 Score=27.65 Aligned_cols=39 Identities=15% Similarity=0.336 Sum_probs=26.9
Q ss_pred CCCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhccc
Q 040358 34 NLPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLI 74 (236)
Q Consensus 34 ~~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (236)
.+.+.....|+.|..|+-+-||.|+..+ ..|....+ ++.
T Consensus 20 ~~~l~~~~gk~vll~F~a~wC~~C~~~~-~~l~~l~~-~~~ 58 (144)
T 1o73_A 20 EVSLGSLVGKTVFLYFSASWCPPCRGFT-PVLAEFYE-KHH 58 (144)
T ss_dssp CBCSGGGTTCEEEEEEECTTCHHHHHHH-HHHHHHHH-HHT
T ss_pred cCcHHHhCCCEEEEEEECcCCHHHHHHH-HHHHHHHH-Hhc
Confidence 3344444567888888999999999886 45666555 354
No 44
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=59.01 E-value=14 Score=27.71 Aligned_cols=40 Identities=23% Similarity=0.481 Sum_probs=28.8
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
....|+.|..|+-+-||+|++.+ ..|....++ +. +++++-
T Consensus 34 ~~~gk~~lv~F~~~~C~~C~~~~-~~l~~l~~~-~~---~v~vv~ 73 (165)
T 3ha9_A 34 NVGGDVVILWFMAAWCPSCVYMA-DLLDRLTEK-YR---EISVIA 73 (165)
T ss_dssp GCCSSEEEEEEECTTCTTHHHHH-HHHHHHHHH-CT---TEEEEE
T ss_pred HhCCCEEEEEEECCCCcchhhhH-HHHHHHHHH-cC---CcEEEE
Confidence 34568899999999999999987 456666653 55 455543
No 45
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=58.97 E-value=17 Score=24.62 Aligned_cols=33 Identities=9% Similarity=0.220 Sum_probs=22.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..+..|..||.+-||.|+.+. ..+....+ .+.+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 49 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIA-PVIDELAK-EYSG 49 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCChHHHHHH-HHHHHHHH-HhcC
Confidence 356778889999999999885 34444333 3443
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=58.62 E-value=18 Score=24.30 Aligned_cols=33 Identities=12% Similarity=0.309 Sum_probs=22.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||+|+.+. ..+....+ .+.+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 47 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILA-PIIEELAE-DYPQ 47 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHH-HHHHHHHH-HCTT
T ss_pred cCCcEEEEEECCCChhHHHHh-HHHHHHHH-HcCC
Confidence 356788888999999999985 34444333 3444
No 47
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=57.94 E-value=17 Score=25.05 Aligned_cols=21 Identities=14% Similarity=0.409 Sum_probs=17.6
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..+.-|..||..-||.|+.+.
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~ 41 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVT 41 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHH
T ss_pred cCCEEEEEEeCCCChhHHHHH
Confidence 346778889999999999885
No 48
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=57.63 E-value=4.2 Score=27.48 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=14.8
Q ss_pred eEEEEEEEecChhhHHH
Q 040358 44 VNLSLYYETLCPGCAEF 60 (236)
Q Consensus 44 V~V~vyyESlCPd~~~F 60 (236)
.+|.+|+-..||+|++.
T Consensus 4 m~v~ly~~~~Cp~C~~~ 20 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWA 20 (89)
T ss_dssp CCEEEEECTTCHHHHHH
T ss_pred eEEEEEEcCCChhHHHH
Confidence 46899999999999975
No 49
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=57.26 E-value=11 Score=26.69 Aligned_cols=29 Identities=14% Similarity=0.378 Sum_probs=22.0
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..++.|..|+-+-||+|+.++ ..|....+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~-~~l~~~~~ 52 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEA-PVVGQVAA 52 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHH-HHHHHHHH
Confidence 456778888899999999986 45655554
No 50
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=56.96 E-value=32 Score=24.43 Aligned_cols=31 Identities=16% Similarity=0.382 Sum_probs=22.5
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
....++.|..||-+-||.|+.+. ..|..+.+
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~-~~l~~~~~ 53 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQ-KELSYVSK 53 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHH-HHHHHHHH
T ss_pred HhCCCcEEEEEECCCCccHHHHH-HHHHHHHH
Confidence 34567788889999999999886 34544443
No 51
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=56.57 E-value=20 Score=24.53 Aligned_cols=33 Identities=9% Similarity=0.165 Sum_probs=22.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||.|+.+. ..|....+ .+.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 50 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIA-PVVDEIAG-EYKD 50 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCCHhHHHHH-HHHHHHHH-HhCC
Confidence 356778888999999999885 33443333 3443
No 52
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=56.38 E-value=20 Score=24.85 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=22.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||-+-||.|+.+. ..|....+ .+.+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 54 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIA-PSLEAIAA-EYGD 54 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCeEEEEEECCCCHhHHhcC-HHHHHHHH-HhcC
Confidence 356778889999999999885 33444443 3433
No 53
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=56.34 E-value=23 Score=23.99 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=20.9
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++.|..||..-||.|+++. ..+....
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~-~~l~~~~ 46 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMIS-PKLVELS 46 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHhh-HHHHHHH
Confidence 457788899999999999886 3444433
No 54
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=55.32 E-value=20 Score=25.47 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=23.0
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..+..|..||..-||.|+++. ..|....+ .+.+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~-~~l~~~~~-~~~~ 62 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILG-PRLEKMVA-KQHG 62 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCCHHHHHHH-HHHHHHHH-HhcC
Confidence 456778889999999999985 34544443 3443
No 55
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=54.22 E-value=21 Score=26.19 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=23.1
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||.|+++. ..|..+.+ .+.+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~-~~l~~l~~-~~~~ 69 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVA-PILDELAK-EYDG 69 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCEEEEEEECCcCHHHHHHH-HHHHHHHH-HhcC
Confidence 457788899999999999886 34444333 3443
No 56
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=54.13 E-value=5.5 Score=27.42 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=13.0
Q ss_pred EEEEEEe----cChhhHHHH
Q 040358 46 LSLYYET----LCPGCAEFI 61 (236)
Q Consensus 46 V~vyyES----lCPd~~~Fi 61 (236)
|.||..+ .||+|++..
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak 21 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAK 21 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHHH
Confidence 7788888 999998763
No 57
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=53.24 E-value=23 Score=24.08 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=22.6
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
.+..|..||..-||.|+.+. ..|....+ .+.+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 52 (109)
T 3tco_A 21 NKLVLVDCWAEWCAPCHLYE-PIYKKVAE-KYKG 52 (109)
T ss_dssp SSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCeEEEEEECCCCHHHHhhh-HHHHHHHH-HhCC
Confidence 57788889999999999886 34444443 3544
No 58
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=53.09 E-value=14 Score=24.51 Aligned_cols=17 Identities=18% Similarity=0.442 Sum_probs=14.8
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|.+|+-+-||+|++..
T Consensus 2 ~v~~f~~~~C~~C~~~~ 18 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAK 18 (85)
T ss_dssp EEEEECCTTSTHHHHHH
T ss_pred EEEEEeCCCCCCHHHHH
Confidence 68899999999999764
No 59
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=52.11 E-value=27 Score=23.68 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=23.2
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||+|+++. ..+....+ .+.+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 51 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIK-PFFHSLSE-KYSN 51 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH-HSTT
T ss_pred CCCeEEEEEECCCChhhHHHH-HHHHHHHH-HccC
Confidence 467788899999999999885 34444333 3444
No 60
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=52.09 E-value=30 Score=24.70 Aligned_cols=32 Identities=9% Similarity=0.451 Sum_probs=24.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLI 74 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (236)
..|+.|..|+-+-||.|+.++ ..|....+ ++.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~-~~l~~~~~-~~~ 64 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKEL-PQFQSFYD-AHP 64 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHH-HHHHHHHH-HCC
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HcC
Confidence 667888888999999999976 45666665 354
No 61
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=51.92 E-value=16 Score=26.07 Aligned_cols=29 Identities=14% Similarity=0.377 Sum_probs=22.3
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..|+.|..|+-+-||.|+..+ ..|....+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~-~~l~~~~~ 51 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEA-PSLSQVAA 51 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHH-HHHHHHHH
Confidence 457788888899999999876 45665554
No 62
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=51.66 E-value=39 Score=24.25 Aligned_cols=35 Identities=14% Similarity=0.285 Sum_probs=24.5
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
....++.|..||-+-||.|+++. ..|....+ .+.+
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~-p~l~~~~~-~~~~ 73 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQS-TEMDKLQK-YYGK 73 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHH-HHHHHHHH-HHGG
T ss_pred HccCCEEEEEEECCCCHHHHHHh-HHHHHHHH-HhcC
Confidence 35678889999999999999885 34444443 3443
No 63
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=51.58 E-value=25 Score=24.83 Aligned_cols=33 Identities=9% Similarity=0.196 Sum_probs=22.9
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..+..|..||.+-||.|+.+. ..|....+ ++.+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 65 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMA-PVFADLAK-KFPN 65 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHH-HHHHHHHH-HCTT
T ss_pred cCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HCCC
Confidence 456788889999999999886 34444443 3444
No 64
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=51.49 E-value=27 Score=24.63 Aligned_cols=21 Identities=29% Similarity=0.534 Sum_probs=16.9
Q ss_pred CCCceEEEEEEEecChhhHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEF 60 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~F 60 (236)
...+..|.+|+-.-||.|++.
T Consensus 13 ~~~~~~v~~f~~~~C~~C~~~ 33 (100)
T 1wjk_A 13 NRALPVLTLFTKAPCPLCDEA 33 (100)
T ss_dssp CCCCCEEEEEECSSCHHHHHH
T ss_pred cCCCCEEEEEeCCCCcchHHH
Confidence 345667999999999999855
No 65
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=51.30 E-value=25 Score=25.59 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=23.5
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...++.|..||..-||.|+++. ..+..+.+ .+.+
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~-p~l~~l~~-~~~~ 71 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIA-PILDEIAD-EYQG 71 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTH-HHHHHHHH-HTTT
T ss_pred hcCCEEEEEEECCCCHHHHHHh-HHHHHHHH-HhcC
Confidence 4567888999999999999885 33444333 3443
No 66
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=51.16 E-value=18 Score=26.45 Aligned_cols=41 Identities=12% Similarity=0.280 Sum_probs=26.9
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|..|+-+-||.|+..+ ..|...++ ++.+.-+++++-
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~-~~l~~l~~-~~~~~~~~~vv~ 67 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFT-PQLIDFYK-AHAEKKNFEVML 67 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHHH-HHTTTTTEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HhccCCCEEEEE
Confidence 457778888889999999886 45666555 354312344443
No 67
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=51.05 E-value=15 Score=28.12 Aligned_cols=47 Identities=17% Similarity=0.311 Sum_probs=31.1
Q ss_pred CCCCCCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 35 LPPPKHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 35 ~~~~~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
+.+.....|+.|..|+-+-||.|+..+ ..|...++ ++.+--++.++.
T Consensus 41 v~l~~~~gk~vll~F~a~wC~~C~~~~-p~l~~l~~-~~~~~~~v~vv~ 87 (165)
T 3s9f_A 41 ADMDSLSGKTVFFYFSASWCPPCRGFT-PQLVEFYE-KHHDSKNFEIIL 87 (165)
T ss_dssp ECSGGGTTSEEEEEEECTTCHHHHHHH-HHHHHHHH-HHTTTTTEEEEE
T ss_pred ccHHHcCCCEEEEEEECCcChhHHHHH-HHHHHHHH-HhccCCCeEEEE
Confidence 344444567888889999999999987 45666665 355422455544
No 68
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=50.66 E-value=26 Score=25.57 Aligned_cols=34 Identities=9% Similarity=0.243 Sum_probs=25.1
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...|+.|..|+-+-||.|+.++ ..|....+ ++.+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~-~~l~~l~~-~~~~ 59 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSF-PWMNQMQA-KYKA 59 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHH-HHHHHHHH-HHGG
T ss_pred hCCCEEEEEEECCcCHHHHHHH-HHHHHHHH-Hhhc
Confidence 4567888889999999999886 45666655 3544
No 69
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=50.41 E-value=5.3 Score=28.68 Aligned_cols=16 Identities=25% Similarity=0.692 Sum_probs=12.2
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
.|+||.-+.||+|.+.
T Consensus 5 ~I~vYs~~~Cp~C~~a 20 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRL 20 (92)
T ss_dssp CEEEEECTTCSSHHHH
T ss_pred cEEEEcCCCCHhHHHH
Confidence 4778888888888765
No 70
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=50.15 E-value=22 Score=26.14 Aligned_cols=30 Identities=10% Similarity=0.356 Sum_probs=21.7
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...++.|..||-+-||.|+.+ .|.+++ +.+
T Consensus 38 ~~~k~vvv~F~a~wC~~C~~~-----~p~l~~-l~~ 67 (133)
T 3cxg_A 38 TQNSSIVIKFGAVWCKPCNKI-----KEYFKN-QLN 67 (133)
T ss_dssp -CCSEEEEEEECTTCHHHHHT-----HHHHHG-GGG
T ss_pred cCCCEEEEEEECCCCHHHHHH-----HHHHHH-HHH
Confidence 345788999999999999975 455653 443
No 71
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=50.15 E-value=10 Score=28.72 Aligned_cols=47 Identities=11% Similarity=-0.074 Sum_probs=27.4
Q ss_pred HHHHHHhcCC-ChhhHhhcccCchhHHHHHHHHhhhhhcCCCCceeeEEEECCeech
Q 040358 148 WLTCCKDLEL-SPNFIKDCYESGIGRLLELKYGDETLHLNPPLEYVPWVTVNNKALR 203 (236)
Q Consensus 148 ~~~Ca~~~g~-d~~~I~~C~~~~~G~~Ll~~~~~~T~~l~p~~~~VPwI~ING~~~~ 203 (236)
..+-.+..|+ ++..+ +-..+.++.....+.|. .+.||-|+|||++++
T Consensus 41 ak~lL~~~gv~~~~~~----~v~~~~~~r~~l~~~sg-----~~TvPqIFI~g~~IG 88 (118)
T 2wul_A 41 VVQILRLHGVRDYAAY----NVLDDPELRQGIKDYSN-----WPTIPQVYLNGEFVG 88 (118)
T ss_dssp HHHHHHHTTCCSCEEE----ETTSCHHHHHHHHHHHT-----CCSSCEEEETTEEEE
T ss_pred HHHHHHHhCCcCeEee----cccCCHHHHHHHHHhcc-----CCCCCeEeECCEEEC
Confidence 3344555665 34433 11234455555555553 257999999999985
No 72
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=50.11 E-value=11 Score=25.15 Aligned_cols=17 Identities=24% Similarity=0.682 Sum_probs=14.7
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|.+|+-.-||+|++..
T Consensus 3 ~~~~f~~~~C~~C~~~~ 19 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAE 19 (80)
T ss_dssp EEEEEEECSCHHHHHHH
T ss_pred ceEEEeCCCCCchHHHH
Confidence 58899999999999764
No 73
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=49.99 E-value=30 Score=23.80 Aligned_cols=29 Identities=14% Similarity=0.355 Sum_probs=21.2
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..++.|..||..-||.|+.+. ..|....+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~-~~l~~~~~ 53 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIA-PIFAELAK 53 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHH-HHHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHH-HHHHHHHH
Confidence 467788889999999999886 34444443
No 74
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=49.95 E-value=28 Score=25.42 Aligned_cols=40 Identities=20% Similarity=0.420 Sum_probs=26.8
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|..|+-+-||+|+..+ ..|....+ ++.+. +++++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~-~~l~~l~~-~~~~~-~~~vv~ 66 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEM-PKIIKTAN-DYKNK-NFQVLA 66 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHH-HHHHHHHH-HGGGT-TEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHH-HHHHHHHH-HhccC-CeEEEE
Confidence 457788888899999999886 45666554 35442 344443
No 75
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=49.54 E-value=29 Score=24.25 Aligned_cols=28 Identities=18% Similarity=0.331 Sum_probs=20.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..+..|..||..-||.|+.+. ..|..+.
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~-~~~~~~~ 56 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVA-PVLEEIA 56 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 456778889999999999885 3444333
No 76
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=49.32 E-value=27 Score=25.82 Aligned_cols=33 Identities=18% Similarity=0.410 Sum_probs=24.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..|+.|..|+-+-||+|+.++ ..|....+ ++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~-~~l~~l~~-~~~~ 65 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEI-PDMVQVQK-TWAS 65 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHH-HHHHHHHH-HHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHH-HHHHHHHH-Hhcc
Confidence 457788889999999999986 45666665 3544
No 77
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=49.26 E-value=7.9 Score=27.73 Aligned_cols=20 Identities=20% Similarity=0.536 Sum_probs=16.8
Q ss_pred CceEEEEEEEecChhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi 61 (236)
.+.+|+||.-+-||+|++..
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak 33 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRAL 33 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHH
T ss_pred CCCCEEEEEcCCChhHHHHH
Confidence 45588999999999999764
No 78
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=48.97 E-value=27 Score=24.06 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=20.0
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
.++.|..||.+-||.|+.+. ..|....
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~-~~l~~~~ 50 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIA-PLFETLS 50 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCeEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 56778889999999999886 3344433
No 79
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=48.58 E-value=20 Score=26.77 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=27.0
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|-.|+-+-||.|+..+ ..|...++ ++.+. +++++-
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~-~~l~~l~~-~~~~~-~~~vv~ 73 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHN-LALRELYN-KYASQ-GFEIYQ 73 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHH-HHHHHHHH-HHGGG-TEEEEE
T ss_pred CCCEEEEEEEcCCChhhHHHH-HHHHHHHH-HhccC-CeEEEE
Confidence 457778888889999999886 45666665 35543 344443
No 80
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=47.93 E-value=24 Score=26.02 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=22.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||-+-||.|+++. ..|..+.+ .+.+
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~-~~l~~l~~-~~~~ 55 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAME-PYFEEYAK-EYGS 55 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HHTT
T ss_pred CCCcEEEEEECCCChhHHHHH-HHHHHHHH-HhCC
Confidence 367788899999999999985 33433333 3444
No 81
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=47.86 E-value=9.2 Score=28.83 Aligned_cols=16 Identities=25% Similarity=0.521 Sum_probs=14.5
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
+|.+|+-+.||+|++.
T Consensus 38 ~Vvvy~~~~Cp~C~~a 53 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKAT 53 (129)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCCCchHHH
Confidence 4899999999999977
No 82
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=47.58 E-value=12 Score=27.49 Aligned_cols=22 Identities=36% Similarity=0.680 Sum_probs=17.4
Q ss_pred EEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 45 NLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
+|.+|+-+-||+|++. |.+.++
T Consensus 26 ~Vvvf~~~~Cp~C~~a----lk~~L~ 47 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAA----LNTLFE 47 (118)
T ss_dssp SEEEEECSSCHHHHHH----HHHHHT
T ss_pred cEEEEEcCCCcCHHHH----HHHHHH
Confidence 4788999999999976 455554
No 83
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=47.45 E-value=16 Score=26.23 Aligned_cols=15 Identities=33% Similarity=0.262 Sum_probs=13.0
Q ss_pred CceeeEEEECCeech
Q 040358 189 LEYVPWVTVNNKALR 203 (236)
Q Consensus 189 ~~~VPwI~ING~~~~ 203 (236)
...||.|+|||++++
T Consensus 71 ~~tvP~ifi~g~~ig 85 (113)
T 3rhb_A 71 QHTVPNVFVCGKHIG 85 (113)
T ss_dssp CCSSCEEEETTEEEE
T ss_pred CCCcCEEEECCEEEc
Confidence 478999999999874
No 84
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=47.31 E-value=33 Score=23.92 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=21.9
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
...++-|..||.+-||.|+++. ..|....+
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~-p~l~~l~~ 51 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIA-PMIEKFSE 51 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred hcCCEEEEEEECCcCHhHHHHH-HHHHHHHH
Confidence 3467888899999999999886 34444443
No 85
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=47.20 E-value=12 Score=27.15 Aligned_cols=40 Identities=8% Similarity=0.230 Sum_probs=27.7
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEE
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLI 82 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lv 82 (236)
...|+.|..|+-+-||.|++.+ ..|....+ .+.+. +++++
T Consensus 29 ~~gk~vll~f~~~~C~~C~~~~-~~l~~l~~-~~~~~-~~~~v 68 (148)
T 3hcz_A 29 VQAKYTILFFWDSQCGHCQQET-PKLYDWWL-KNRAK-GIQVY 68 (148)
T ss_dssp CCCSEEEEEEECGGGCTTCSHH-HHHHHHHH-HHGGG-TEEEE
T ss_pred cCCCEEEEEEECCCCccHHHHH-HHHHHHHH-HhccC-CEEEE
Confidence 4567888889999999999886 45666555 35543 34444
No 86
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=47.01 E-value=30 Score=24.32 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=22.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||.|+++. ..+..+.+ .+.+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~-~~~~~~~~-~~~~ 52 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFA-PEFELLAR-MIKG 52 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HHTT
T ss_pred CCCeEEEEEECCCCHHHHHHH-HHHHHHHH-HhcC
Confidence 356778889999999999885 34444333 3443
No 87
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=47.01 E-value=23 Score=26.00 Aligned_cols=42 Identities=12% Similarity=0.320 Sum_probs=27.0
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEE
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLI 82 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lv 82 (236)
....|+.|..|+-+-||.|+.++ ..|...++ ++.+.-+++++
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~-p~l~~l~~-~~~~~~~~~vv 66 (146)
T 1o8x_A 25 SLAGKLVFFYFSASWCPPARGFT-PQLIEFYD-KFHESKNFEVV 66 (146)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHH-HHHHHHHH-HHTTTTTEEEE
T ss_pred HhCCCEEEEEEEccCCHHHHHHH-HHHHHHHH-HhhhcCCeEEE
Confidence 33457778888889999999886 45655554 35421234444
No 88
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=46.85 E-value=24 Score=26.08 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=24.7
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...|+.|..|+-+-||.|+..+...|...++ ++.+
T Consensus 28 ~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~-~~~~ 62 (160)
T 3lor_A 28 LRGKVVVVEVFQMLCPGCVNHGVPQAQKIHR-MIDE 62 (160)
T ss_dssp HTTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCT
T ss_pred hCCCEEEEEEEcCCCcchhhhhhHHHHHHHH-HhCc
Confidence 3467888889999999999842245666665 3554
No 89
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=46.57 E-value=8.8 Score=27.28 Aligned_cols=18 Identities=17% Similarity=0.283 Sum_probs=15.2
Q ss_pred eEEEEEEEecChhhHHHH
Q 040358 44 VNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 44 V~V~vyyESlCPd~~~Fi 61 (236)
-+|.+|+-+.||+|++..
T Consensus 22 ~~v~ly~~~~Cp~C~~ak 39 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTK 39 (103)
T ss_dssp SCEEEEECSSCHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHH
Confidence 458889999999999764
No 90
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=46.50 E-value=16 Score=26.49 Aligned_cols=15 Identities=27% Similarity=0.275 Sum_probs=13.0
Q ss_pred CceeeEEEECCeech
Q 040358 189 LEYVPWVTVNNKALR 203 (236)
Q Consensus 189 ~~~VPwI~ING~~~~ 203 (236)
...||.|+|||++++
T Consensus 68 ~~tvP~vfi~g~~ig 82 (114)
T 3h8q_A 68 QKTVPNIFVNKVHVG 82 (114)
T ss_dssp CCSSCEEEETTEEEE
T ss_pred CCccCEEEECCEEEe
Confidence 478999999999875
No 91
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=46.43 E-value=29 Score=23.72 Aligned_cols=20 Identities=15% Similarity=0.630 Sum_probs=17.2
Q ss_pred CceEEEEEEEecChhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi 61 (236)
.++.|..||.+-||.|+++.
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~ 40 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLA 40 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHH
T ss_pred CCcEEEEEECCCChhHHHhh
Confidence 56778899999999999875
No 92
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=46.03 E-value=17 Score=26.01 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=23.1
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...++.|..||..-||.|+++. ..|..+.+ .+.+
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~-~~~~~~~~-~~~~ 66 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLT-PEWKKAAT-ALKD 66 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGH-HHHHHHHH-HTTT
T ss_pred cCCCeEEEEEECCCCHHHHhhC-HHHHHHHH-HhcC
Confidence 3467788899999999999875 33433333 3544
No 93
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=45.49 E-value=30 Score=24.54 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=23.1
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||.|+++. ..|..+.+ .+.+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~-p~l~~l~~-~~~~ 62 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIK-PFFHSLSE-KYSN 62 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHT-TCTT
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HCCC
Confidence 567888899999999999885 33443333 3444
No 94
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=45.11 E-value=32 Score=24.01 Aligned_cols=34 Identities=6% Similarity=0.163 Sum_probs=24.6
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...|+.|..|+-+-||+|+..+ ..|....++ +.+
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~-~~l~~~~~~-~~~ 53 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASL-PDTDEIAKE-AGD 53 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHH-HHHHHHHHT-CTT
T ss_pred hCCCEEEEEEEcCcCHHHHHHH-HHHHHHHHH-hCC
Confidence 3457778888899999999886 456666653 444
No 95
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=44.72 E-value=27 Score=25.54 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=19.8
Q ss_pred hhHHHHHHHHhhhhhcCCCCceeeEEEECCeech
Q 040358 170 IGRLLELKYGDETLHLNPPLEYVPWVTVNNKALR 203 (236)
Q Consensus 170 ~G~~Ll~~~~~~T~~l~p~~~~VPwI~ING~~~~ 203 (236)
.|.++..+..+++ +...||.|+|||+.++
T Consensus 66 ~~~~~~~~l~~~~-----g~~tvP~vfi~g~~ig 94 (118)
T 3c1r_A 66 EGADIQAALYEIN-----GQRTVPNIYINGKHIG 94 (118)
T ss_dssp THHHHHHHHHHHH-----SCCSSCEEEETTEEEE
T ss_pred ChHHHHHHHHHHh-----CCCCcCEEEECCEEEE
Confidence 3555555544444 3478999999999874
No 96
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=44.67 E-value=39 Score=23.47 Aligned_cols=29 Identities=7% Similarity=0.257 Sum_probs=21.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..++.|..||..-||.|+++. ..|..+.+
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~-~~l~~l~~ 53 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIA-PFYEECSK 53 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHH-HHHHHHHH
Confidence 457788889999999999986 34444443
No 97
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=44.45 E-value=38 Score=24.72 Aligned_cols=30 Identities=10% Similarity=0.274 Sum_probs=22.7
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
...|+.|..|+-+-||.|+..+ ..|....+
T Consensus 24 ~~gk~vlv~F~~~~C~~C~~~~-~~l~~~~~ 53 (151)
T 2f9s_A 24 LKGKGVFLNFWGTWCEPCKKEF-PYMANQYK 53 (151)
T ss_dssp GTTSEEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHH-HHHHHHHH
Confidence 3457788888999999999886 45665554
No 98
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=44.39 E-value=10 Score=25.00 Aligned_cols=17 Identities=29% Similarity=0.708 Sum_probs=13.4
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|.+|+-..||+|++..
T Consensus 2 ~i~~y~~~~C~~C~~~~ 18 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAK 18 (82)
T ss_dssp CEEEEECSSCHHHHHHH
T ss_pred cEEEEECCCChhHHHHH
Confidence 46788888999998653
No 99
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=44.14 E-value=28 Score=25.68 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=26.0
Q ss_pred CCCCCCCceEEEEEEEecChhhHHH-HHhhhHHHHHhccc
Q 040358 36 PPPKHNDNVNLSLYYETLCPGCAEF-ISEGLGKLFEKGLI 74 (236)
Q Consensus 36 ~~~~~~~kV~V~vyyESlCPd~~~F-i~~qL~P~~~~~l~ 74 (236)
.+.....|+.|..|+-+-||.|+.. + ..|...++ ++.
T Consensus 22 ~l~~~~gk~vlv~f~a~wC~~C~~~~~-~~l~~l~~-~~~ 59 (158)
T 3eyt_A 22 TLADLRGKVIVIEAFQMLCPGCVMHGI-PLAQKVRA-AFP 59 (158)
T ss_dssp CTGGGTTSEEEEEEECTTCHHHHHTHH-HHHHHHHH-HSC
T ss_pred CHHHhCCCEEEEEEECCcCcchhhhhh-HHHHHHHH-HhC
Confidence 3333446788888889999999985 4 56666665 355
No 100
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=44.04 E-value=32 Score=24.40 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=22.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++.|..||.+-||.|+++. ..|....+ ++.+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~-p~l~~~~~-~~~~ 61 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQ-PHLTKLIQ-AYPD 61 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTH-HHHHHHHH-HCTT
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HCCC
Confidence 356788889999999999885 33444333 3444
No 101
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=43.77 E-value=36 Score=24.51 Aligned_cols=28 Identities=11% Similarity=0.202 Sum_probs=20.8
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++-|..||.+-||.|+.+. ..|..+.
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~-~~l~~l~ 64 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIA-PFFADLA 64 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred cCCEEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 467788889999999999885 3344333
No 102
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=43.38 E-value=43 Score=23.07 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=20.8
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..+..|..||.+-||.|+++. ..|....+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~-~~l~~~~~ 51 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMA-PKYEKLAE 51 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHC-HHHHHHHH
Confidence 456778888899999999886 34444443
No 103
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=42.90 E-value=39 Score=23.58 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=21.3
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
...+.-|..||.+-||.|+++. ..+..+.
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~-p~~~~~~ 51 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALA-PKYEELG 51 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHH-HHHHHHH
T ss_pred cCCCCEEEEEECCCCHhHHHhh-HHHHHHH
Confidence 3567788899999999999986 3344333
No 104
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=42.80 E-value=26 Score=24.50 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=20.3
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++.|..||.+-||.|+.+. ..|..+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~-~~l~~~~ 43 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIA-PVLEELD 43 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHH-HHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 456778888999999999885 3343333
No 105
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.27 E-value=26 Score=25.13 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=21.3
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..++.|..||.+-||.|+.+. ..|..+.+
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~-p~~~~~~~ 52 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLE-PIYTSLGK 52 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHH-HHHHHHHH
T ss_pred CCCcEEEEEECCCChhHHHHH-HHHHHHHH
Confidence 467788889999999999986 33444433
No 106
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=42.19 E-value=30 Score=25.87 Aligned_cols=29 Identities=21% Similarity=0.210 Sum_probs=19.8
Q ss_pred hhHHHHHHHHhhhhhcCCCCceeeEEEECCeech
Q 040358 170 IGRLLELKYGDETLHLNPPLEYVPWVTVNNKALR 203 (236)
Q Consensus 170 ~G~~Ll~~~~~~T~~l~p~~~~VPwI~ING~~~~ 203 (236)
.|.++..+..+++ +...||.|+|||++++
T Consensus 78 ~~~~~~~~L~~~~-----g~~tVP~vfi~g~~ig 106 (129)
T 3ctg_A 78 NGSEIQDALEEIS-----GQKTVPNVYINGKHIG 106 (129)
T ss_dssp THHHHHHHHHHHH-----SCCSSCEEEETTEEEE
T ss_pred CHHHHHHHHHHHh-----CCCCCCEEEECCEEEc
Confidence 3455555544444 3468999999999975
No 107
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=42.07 E-value=21 Score=26.91 Aligned_cols=15 Identities=27% Similarity=0.153 Sum_probs=12.9
Q ss_pred CceeeEEEECCeech
Q 040358 189 LEYVPWVTVNNKALR 203 (236)
Q Consensus 189 ~~~VPwI~ING~~~~ 203 (236)
...||.|+|||++++
T Consensus 68 ~~tVP~IfI~G~~IG 82 (127)
T 3l4n_A 68 RGTVPNLLVNGVSRG 82 (127)
T ss_dssp CCSSCEEEETTEECC
T ss_pred CCCcceEEECCEEEc
Confidence 368999999999975
No 108
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=42.04 E-value=40 Score=24.75 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=24.3
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...|+.|..|+-+-||.|+..+ ..|....+ ++.+
T Consensus 27 ~~gk~vll~F~a~~C~~C~~~~-~~l~~l~~-~~~~ 60 (152)
T 2lrn_A 27 FKGKYVLVDFWFAGCSWCRKET-PYLLKTYN-AFKD 60 (152)
T ss_dssp GTTSEEEEEEECTTCTTHHHHH-HHHHHHHH-HHTT
T ss_pred cCCCEEEEEEECCCChhHHHHH-HHHHHHHH-Hhcc
Confidence 3457888888999999999886 45655554 3444
No 109
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=41.86 E-value=38 Score=25.18 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=26.3
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEE
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLI 82 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lv 82 (236)
..|+.|..|+-+-||.|+..+ ..|...++ ++.+. +++++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~-~~l~~l~~-~~~~~-~~~vv 69 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNY-AEMNQLYE-KYKDQ-GLEIL 69 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEE
T ss_pred CCCEEEEEEEeccCCccHHHH-HHHHHHHH-HhccC-CEEEE
Confidence 457778888889999999876 45666665 35443 34444
No 110
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=41.25 E-value=12 Score=26.18 Aligned_cols=16 Identities=19% Similarity=0.658 Sum_probs=14.0
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
.|.+|+-+.||+|++.
T Consensus 13 ~v~~f~~~~C~~C~~~ 28 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKT 28 (105)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred CEEEEEcCCCHhHHHH
Confidence 4788999999999965
No 111
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=41.15 E-value=33 Score=24.93 Aligned_cols=41 Identities=24% Similarity=0.388 Sum_probs=27.5
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHH---HHHhcccceeeEEEEe
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGK---LFEKGLISIVNLRLIP 83 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P---~~~~~l~d~vdl~lvP 83 (236)
-..|+.|-.||-+-||.|+..+ ..|.. .++ .+.+ -+++++-
T Consensus 29 ~~gk~vll~F~a~wC~~C~~~~-~~l~~~~~l~~-~~~~-~~~~vi~ 72 (142)
T 3eur_A 29 FPAEYTLLFINNPGCHACAEMI-EGLKASPVING-FTAA-KKLKVLS 72 (142)
T ss_dssp CCCSEEEEEECCSSSHHHHHHH-HHHHHCHHHHH-HHHT-TSEEEEE
T ss_pred cCCCEEEEEEECCCCccHHHHH-HHHhhhHHHHH-Hhcc-CCeEEEE
Confidence 3458888889999999999986 45665 454 2433 2455544
No 112
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=41.11 E-value=9.8 Score=27.72 Aligned_cols=17 Identities=12% Similarity=0.522 Sum_probs=14.5
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|.+|.-+.||+|.+..
T Consensus 18 ~v~vy~~~~Cp~C~~ak 34 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRVK 34 (114)
T ss_dssp SEEEEECTTCHHHHHHH
T ss_pred CEEEEEcCCCCcHHHHH
Confidence 57889999999998663
No 113
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=40.73 E-value=39 Score=24.27 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=24.9
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcc
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGL 73 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l 73 (236)
....|+.|..|+-+-||.|+..+ ..|....+ ++
T Consensus 30 ~~~gk~vll~F~~~~C~~C~~~~-~~l~~l~~-~~ 62 (148)
T 3fkf_A 30 RFRNRYLLLNFWASWCDPQPEAN-AELKRLNK-EY 62 (148)
T ss_dssp TTTTSEEEEEEECGGGCCCHHHH-HHHHHHHH-HT
T ss_pred ccCCcEEEEEEECCCCHHHHHHh-HHHHHHHH-Hh
Confidence 34568888899999999999886 45666555 35
No 114
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=40.71 E-value=12 Score=32.48 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=18.6
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
..+++.|++|...-||+|.+.-
T Consensus 40 ~~~~~~VelyTs~gCp~C~~Ak 61 (270)
T 2axo_A 40 EAVKGVVELFTSQGCASCPPAD 61 (270)
T ss_dssp SCCCCEEEEEECTTCTTCHHHH
T ss_pred cCCCcEEEEEeCCCCCChHHHH
Confidence 3456999999999999999773
No 115
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.65 E-value=37 Score=24.10 Aligned_cols=21 Identities=19% Similarity=0.583 Sum_probs=17.9
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++.|..||..-||.|+++.
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~ 44 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLE 44 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHH
T ss_pred CCCeEEEEEECCCCHHHHhhc
Confidence 357788899999999999885
No 116
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=40.62 E-value=10 Score=28.84 Aligned_cols=17 Identities=6% Similarity=0.272 Sum_probs=15.1
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|.||.-+.||+|.+..
T Consensus 15 ~Vvvysk~~Cp~C~~ak 31 (127)
T 3l4n_A 15 PIIIFSKSTCSYSKGMK 31 (127)
T ss_dssp SEEEEECTTCHHHHHHH
T ss_pred CEEEEEcCCCccHHHHH
Confidence 49999999999999764
No 117
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=40.14 E-value=34 Score=26.24 Aligned_cols=39 Identities=15% Similarity=0.178 Sum_probs=27.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|..|+-+-||.|+..+ ..|...++ ++.+. ++++-
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~-~~l~~l~~-~~~~~--~~~v~ 70 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSI-GELVALAE-RYRGK--VAFVG 70 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTH-HHHHHHHH-HTTTT--EEEEE
T ss_pred CCCEEEEEEECCCCccHHHHH-HHHHHHHH-HhhcC--eEEEE
Confidence 457888889999999999776 45666665 36554 55543
No 118
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=40.13 E-value=49 Score=24.32 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=23.8
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
...++-|..||-.-||.|+++. ..|....+ .+.+
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~-p~l~~~~~-~~~~ 86 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFA-PIFAETAA-ERAG 86 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHH-HHHHHHHH-HTTT
T ss_pred hcCCcEEEEEECCCCHHHHHHH-HHHHHHHH-HcCC
Confidence 4567788889999999999885 34444443 3443
No 119
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=39.70 E-value=43 Score=24.84 Aligned_cols=40 Identities=18% Similarity=0.291 Sum_probs=26.7
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|..|+-+-||.|+..+ ..|...++ ++.+. +++++-
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~-~~l~~l~~-~~~~~-~~~vv~ 69 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNY-RQLQEMHT-RLVGK-GLRILA 69 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHH-HHHHHHHH-HhhcC-CeEEEE
Confidence 457778888889999999876 45666665 35442 344443
No 120
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=39.37 E-value=7.9 Score=26.53 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=14.7
Q ss_pred eEEEEEEEecChhhHHH
Q 040358 44 VNLSLYYETLCPGCAEF 60 (236)
Q Consensus 44 V~V~vyyESlCPd~~~F 60 (236)
.+|.+|+-+.||+|++.
T Consensus 12 ~~v~ly~~~~Cp~C~~~ 28 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRT 28 (92)
T ss_dssp SSSEEEECTTCHHHHHH
T ss_pred ceEEEEECCCChHHHHH
Confidence 45889999999999975
No 121
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=39.21 E-value=21 Score=26.49 Aligned_cols=15 Identities=20% Similarity=0.302 Sum_probs=12.9
Q ss_pred CceeeEEEECCeech
Q 040358 189 LEYVPWVTVNNKALR 203 (236)
Q Consensus 189 ~~~VPwI~ING~~~~ 203 (236)
...||.|+|||++++
T Consensus 72 ~~tvP~vfI~g~~iG 86 (121)
T 3gx8_A 72 WPTIPQLYVNKEFIG 86 (121)
T ss_dssp CCSSCEEEETTEEEE
T ss_pred CCCCCeEEECCEEEe
Confidence 367999999999974
No 122
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=38.62 E-value=14 Score=24.46 Aligned_cols=16 Identities=19% Similarity=0.571 Sum_probs=13.8
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
+|.+|+.+-||+|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (81)
T 1h75_A 2 RITIYTRNDCVQCHAT 17 (81)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred EEEEEcCCCChhHHHH
Confidence 5788999999999864
No 123
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=38.59 E-value=59 Score=23.59 Aligned_cols=33 Identities=24% Similarity=0.510 Sum_probs=24.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..|+.|..|+-+-||.|+..+ ..|....+ .+.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~-~~l~~~~~-~~~~ 59 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEI-PSMMRLNA-AMAG 59 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-Hhcc
Confidence 457888888899999999986 45666665 3544
No 124
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=38.06 E-value=52 Score=24.34 Aligned_cols=41 Identities=15% Similarity=0.434 Sum_probs=27.8
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEee
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIPW 84 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP~ 84 (236)
..|+.|..|+-+-||.|+..+ ..|....+ ++.+ -++.++..
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~-~~l~~~~~-~~~~-~~~~~v~v 80 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEM-PSMDRLVK-SFPK-GDLVVLAV 80 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHHH-HSST-TSEEEEEE
T ss_pred CCCEEEEEEECCcCHHHHHHH-HHHHHHHH-Hccc-CCeEEEEE
Confidence 457788888899999999876 45666665 3543 24555443
No 125
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=37.94 E-value=14 Score=23.74 Aligned_cols=16 Identities=25% Similarity=0.704 Sum_probs=13.4
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
+|.+|+-..||+|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (75)
T 1r7h_A 2 SITLYTKPACVQCTAT 17 (75)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred eEEEEeCCCChHHHHH
Confidence 4788999999999865
No 126
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=37.56 E-value=58 Score=23.26 Aligned_cols=20 Identities=15% Similarity=0.532 Sum_probs=16.5
Q ss_pred CceEEEEEEEe-------cChhhHHHH
Q 040358 42 DNVNLSLYYET-------LCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyES-------lCPd~~~Fi 61 (236)
.++-|..||-+ -||+|+.+.
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~ 50 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAE 50 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHH
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhh
Confidence 56677788888 999999875
No 127
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=37.46 E-value=37 Score=22.82 Aligned_cols=28 Identities=11% Similarity=0.329 Sum_probs=20.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..+.-|..||.+-||.|+.+. ..|....
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~-~~l~~~~ 45 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIA-PKVEALA 45 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHhh-HHHHHHH
Confidence 456778888899999999886 3444433
No 128
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=37.41 E-value=51 Score=23.36 Aligned_cols=27 Identities=19% Similarity=0.347 Sum_probs=20.1
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
.++.|..||.+-||.|+.+. ..|..+.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~-~~l~~l~ 49 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLG-QILPSIA 49 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCEEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 56788889999999999885 3444433
No 129
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=36.92 E-value=48 Score=25.91 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=18.0
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++.|..|+.+-||+|+...
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~ 73 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINL 73 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHH
Confidence 457888889999999999775
No 130
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=36.87 E-value=15 Score=25.06 Aligned_cols=16 Identities=31% Similarity=0.710 Sum_probs=14.1
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
+|.+|+-..||+|++.
T Consensus 7 ~v~ly~~~~C~~C~~~ 22 (92)
T 2khp_A 7 DVIIYTRPGCPYCARA 22 (92)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 5889999999999965
No 131
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=36.81 E-value=13 Score=26.73 Aligned_cols=17 Identities=29% Similarity=0.679 Sum_probs=14.5
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|.+|.-+.||+|++..
T Consensus 20 ~v~vy~~~~Cp~C~~~~ 36 (113)
T 3rhb_A 20 TVVIYSKTWCSYCTEVK 36 (113)
T ss_dssp SEEEEECTTCHHHHHHH
T ss_pred CEEEEECCCChhHHHHH
Confidence 38899999999999653
No 132
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=36.77 E-value=61 Score=22.74 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=20.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++.|..||.+-||.|+++. ..+....
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~-~~l~~~~ 63 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMA-PKYEKLA 63 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHh-HHHHHHH
Confidence 566778888999999999886 3344333
No 133
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=36.53 E-value=34 Score=23.61 Aligned_cols=22 Identities=9% Similarity=0.256 Sum_probs=16.4
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...++.|..||.+-||+|+.+.
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~ 40 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALK 40 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHH
Confidence 3467788899999999999875
No 134
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.41 E-value=24 Score=25.60 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=14.3
Q ss_pred eEEEEEEEecChhhHH
Q 040358 44 VNLSLYYETLCPGCAE 59 (236)
Q Consensus 44 V~V~vyyESlCPd~~~ 59 (236)
.+|.||.-+.||+|..
T Consensus 8 m~V~vy~~~~C~~C~~ 23 (111)
T 2ct6_A 8 MVIRVFIASSSGFVAI 23 (111)
T ss_dssp CCEEEEECSSCSCHHH
T ss_pred cEEEEEEcCCCCCccc
Confidence 4789999999999995
No 135
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=36.31 E-value=13 Score=25.94 Aligned_cols=15 Identities=13% Similarity=0.005 Sum_probs=12.0
Q ss_pred CceeeEEEECCeech
Q 040358 189 LEYVPWVTVNNKALR 203 (236)
Q Consensus 189 ~~~VPwI~ING~~~~ 203 (236)
...||.|+|||++++
T Consensus 58 ~~~vP~ifi~g~~ig 72 (93)
T 1t1v_A 58 KATPPQIVNGNHYCG 72 (93)
T ss_dssp TCCSCEEEETTEEEE
T ss_pred CCCCCEEEECCEEEe
Confidence 467899999998875
No 136
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=36.26 E-value=59 Score=22.37 Aligned_cols=27 Identities=7% Similarity=0.207 Sum_probs=20.0
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
.+..|..||..-||.|+.+. ..|....
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~-~~l~~~~ 54 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIA-PVFAEYA 54 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCEEEEEEECCCCHhHHHHh-HHHHHHH
Confidence 56778889999999999886 3444333
No 137
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=36.14 E-value=64 Score=23.37 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=21.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
.++ -|..||.+-||.|+.+. ..|..+.+ .+.+
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~-~~l~~l~~-~~~~ 81 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVS-PILEELAR-DHAG 81 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCC-EEEEEECCCCHHHHHHH-HHHHHHHH-HccC
Confidence 345 77788899999999885 34444443 3543
No 138
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=36.01 E-value=38 Score=24.61 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=24.2
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
....|+.|..|+-+-||.|+..+ ..|....+ .+.+
T Consensus 27 ~~~gk~~lv~f~~~~C~~C~~~~-~~l~~l~~-~~~~ 61 (152)
T 2lja_A 27 DLKGKYIYIDVWATWCGPCRGEL-PALKELEE-KYAG 61 (152)
T ss_dssp TTTTSEEEEEECCSSCCGGGGTH-HHHHHHHH-HSTT
T ss_pred HcCCCEEEEEEECCcCHhHHHHh-HHHHHHHH-Hhcc
Confidence 34557788888999999998775 45555554 3443
No 139
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=35.34 E-value=28 Score=25.97 Aligned_cols=42 Identities=26% Similarity=0.440 Sum_probs=28.1
Q ss_pred CCCceEEEEEEEecChh-hHHHHHhhhHHHHHhccccee--eEEEEe
Q 040358 40 HNDNVNLSLYYETLCPG-CAEFISEGLGKLFEKGLISIV--NLRLIP 83 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd-~~~Fi~~qL~P~~~~~l~d~v--dl~lvP 83 (236)
-..|+.|..|+-+-||+ |+..+ ..|...++ ++.+.. +++++-
T Consensus 33 ~~gk~vll~f~~~~C~~~C~~~~-~~l~~~~~-~~~~~~~~~v~vv~ 77 (172)
T 2k6v_A 33 FQDKVVLLFFGFTRCPDVCPTTL-LALKRAYE-KLPPKAQERVQVIF 77 (172)
T ss_dssp STTSEEEEEEECTTCSSHHHHHH-HHHHHHHT-TSCHHHHTTEEEEE
T ss_pred hCCCEEEEEEECCCCcchhHHHH-HHHHHHHH-HhhhhccCCEEEEE
Confidence 34678888999999997 99876 45666654 355421 345443
No 140
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=35.27 E-value=39 Score=23.64 Aligned_cols=21 Identities=14% Similarity=0.504 Sum_probs=18.0
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++.|..||.+-||.|+++.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~ 52 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIA 52 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHh
Confidence 567788889999999999875
No 141
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=35.13 E-value=56 Score=20.74 Aligned_cols=25 Identities=16% Similarity=0.422 Sum_probs=16.3
Q ss_pred eEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 44 VNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 44 V~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
++|.+|. +-||.|+.+. ..|..+.+
T Consensus 2 ~~v~f~a-~wC~~C~~~~-~~l~~~~~ 26 (77)
T 1ilo_A 2 MKIQIYG-TGCANCQMLE-KNAREAVK 26 (77)
T ss_dssp EEEEEEC-SSSSTTHHHH-HHHHHHHH
T ss_pred cEEEEEc-CCChhHHHHH-HHHHHHHH
Confidence 4677766 5999999875 34444443
No 142
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=35.07 E-value=39 Score=24.72 Aligned_cols=27 Identities=19% Similarity=0.513 Sum_probs=21.8
Q ss_pred ceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 43 NVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 43 kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
|+.|..|+-+-||.|+..+ ..|....+
T Consensus 31 k~vll~f~~~~C~~C~~~~-~~l~~l~~ 57 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEF-PGLHRVAE 57 (154)
T ss_dssp SSEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHH-HHHHHHHH
Confidence 7888889999999999886 45666555
No 143
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=35.04 E-value=44 Score=22.84 Aligned_cols=21 Identities=10% Similarity=0.275 Sum_probs=17.8
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..+..|..||.+-||.|+++.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~ 40 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIA 40 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHH
T ss_pred CCCEEEEEEECCCChhhHHHH
Confidence 456778899999999999875
No 144
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=34.91 E-value=38 Score=23.76 Aligned_cols=20 Identities=20% Similarity=0.449 Sum_probs=16.7
Q ss_pred CceEEEEEEEecChhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi 61 (236)
.+.-|..||.+-||+|+++.
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~ 48 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFA 48 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHH
T ss_pred CCeEEEEEECCCCccHHHHH
Confidence 35678889999999999885
No 145
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=34.62 E-value=36 Score=24.21 Aligned_cols=28 Identities=21% Similarity=0.358 Sum_probs=20.4
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKL 68 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~ 68 (236)
...++.|..||..-||.|+.+. ..|..+
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~-~~l~~l 58 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIG-PVFEKI 58 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHH-HHHHHH
T ss_pred cCCCEEEEEEECCCCHhHHHHH-HHHHHH
Confidence 3456778888999999999885 334333
No 146
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=34.41 E-value=71 Score=23.27 Aligned_cols=30 Identities=17% Similarity=0.413 Sum_probs=23.6
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
...|+.|..||-+-||.|+..+ ..|...++
T Consensus 22 ~~gk~vlv~F~a~wC~~C~~~~-~~l~~l~~ 51 (151)
T 3raz_A 22 LKAPVRIVNLWATWCGPCRKEM-PAMSKWYK 51 (151)
T ss_dssp CCSSEEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHH-HHHHHHHH
Confidence 4567888899999999999886 45666665
No 147
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=34.39 E-value=15 Score=26.60 Aligned_cols=14 Identities=7% Similarity=0.152 Sum_probs=11.1
Q ss_pred ceeeEEEECCeech
Q 040358 190 EYVPWVTVNNKALR 203 (236)
Q Consensus 190 ~~VPwI~ING~~~~ 203 (236)
..||.|+|||++++
T Consensus 72 ~tvP~ifi~g~~iG 85 (109)
T 3ipz_A 72 PTFPQLYIGGEFFG 85 (109)
T ss_dssp SSSCEEEETTEEEE
T ss_pred CCCCeEEECCEEEe
Confidence 57888888888864
No 148
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=34.24 E-value=33 Score=24.81 Aligned_cols=28 Identities=21% Similarity=0.515 Sum_probs=20.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++-|..||..-||.|+++. ..|..+.
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~-p~~~~~~ 60 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFA-PEYEKIA 60 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTH-HHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHhh-HHHHHHH
Confidence 457788899999999999885 3344333
No 149
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=33.88 E-value=57 Score=25.10 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=27.2
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|..|+-+-||.|+.-+ .+|...+++ +.+. +++++-
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~-~~l~~l~~~-~~~~-~v~vv~ 87 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNY-TQLVDLHAR-YAEC-GLRILA 87 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHH-HHHHHHHHH-HGGG-TEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHH-HHHHHHHHH-hhcC-CeEEEE
Confidence 457888899999999999876 456666653 5442 344443
No 150
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=33.70 E-value=17 Score=26.18 Aligned_cols=17 Identities=18% Similarity=0.688 Sum_probs=14.6
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
.|.+|+-+.||+|++..
T Consensus 20 ~vv~f~~~~Cp~C~~~~ 36 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNAL 36 (114)
T ss_dssp CEEEEECTTCHHHHHHH
T ss_pred CEEEEEeCCChhHHHHH
Confidence 68899999999999653
No 151
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=33.61 E-value=22 Score=27.76 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=26.1
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccce
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISI 76 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~ 76 (236)
....|+.|..|+-+-||+|+..+ ..|...++ ++.+.
T Consensus 43 ~~~Gk~vlv~F~atwC~~C~~~~-p~l~~l~~-~~~~~ 78 (187)
T 3dwv_A 43 QHKGSPLLIYNVASKCGYTKGGY-ETATTLYN-KYKSQ 78 (187)
T ss_dssp GGTTSCEEEEEECCBCSCCTTHH-HHHHHHHH-HHGGG
T ss_pred HhCCCEEEEEEecCCCCCcHHHH-HHHHHHHH-HhhhC
Confidence 34557888899999999999876 45666665 35543
No 152
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=32.97 E-value=16 Score=26.67 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=11.0
Q ss_pred ceeeEEEECCeech
Q 040358 190 EYVPWVTVNNKALR 203 (236)
Q Consensus 190 ~~VPwI~ING~~~~ 203 (236)
..||.|+|||++++
T Consensus 70 ~tvP~ifi~g~~iG 83 (111)
T 3zyw_A 70 PTYPQLYVSGELIG 83 (111)
T ss_dssp CSSCEEEETTEEEE
T ss_pred CCCCEEEECCEEEe
Confidence 56888888888864
No 153
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=32.84 E-value=1.1e+02 Score=20.61 Aligned_cols=22 Identities=14% Similarity=0.315 Sum_probs=18.4
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...++-|..||-+-||.|+++.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~ 37 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVML 37 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHH
T ss_pred hcCCCEEEEEeCCCCcchHHHH
Confidence 4567788889999999999874
No 154
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=32.70 E-value=63 Score=25.41 Aligned_cols=22 Identities=18% Similarity=0.560 Sum_probs=19.0
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...+|.|..||-+-||.|+++.
T Consensus 132 ~~~~~~~v~F~a~wC~~C~~~~ 153 (226)
T 1a8l_A 132 IDQDVRILVFVTPTCPYCPLAV 153 (226)
T ss_dssp CCSCEEEEEEECSSCTTHHHHH
T ss_pred cCCCcEEEEEeCCCCCccHHHH
Confidence 4567889999999999999885
No 155
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=32.58 E-value=54 Score=24.90 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=21.9
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..|+.|..||-+-||+|+..+ ..|...++
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~-~~l~~l~~ 86 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSES-DDLQIIHE 86 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHH-HHHHHHHH
Confidence 457788888899999999886 45555554
No 156
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=32.54 E-value=63 Score=24.35 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=20.9
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
...++.|..||-+-||.|+.+. ..|..+.
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~-p~l~~la 90 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMA-PQFQAAA 90 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred hCCCcEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 3466778888899999999985 3444333
No 157
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=32.08 E-value=77 Score=24.21 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=27.2
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEE
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLI 82 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lv 82 (236)
..|+.|..|+-+-||.|+..+ .+|...+++ +.+. +++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~-p~l~~l~~~-~~~~-~v~vv 86 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHY-RALQQLQRD-LGPH-HFNVL 86 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHH-HHHHHHHHH-HGGG-TEEEE
T ss_pred CCCEEEEEEeccCCCCcHHHH-HHHHHHHHH-hhcC-CEEEE
Confidence 457888899999999999876 456666653 5542 24444
No 158
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=31.44 E-value=69 Score=24.43 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=25.3
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
-..|+.|..|+-+-||.|+..+ ..|..+++ ++.+
T Consensus 36 ~~Gk~vlv~F~atwC~~C~~~~-p~l~~l~~-~~~~ 69 (180)
T 3kij_A 36 YKGKVSLVVNVASDCQLTDRNY-LGLKELHK-EFGP 69 (180)
T ss_dssp GTTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHTT
T ss_pred cCCCEEEEEEEecCCCCcHHHH-HHHHHHHH-Hhcc
Confidence 3567888899999999999886 45666665 3544
No 159
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=31.42 E-value=16 Score=26.29 Aligned_cols=17 Identities=12% Similarity=0.389 Sum_probs=14.0
Q ss_pred EEEEEEE-----ecChhhHHHH
Q 040358 45 NLSLYYE-----TLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyE-----SlCPd~~~Fi 61 (236)
+|.||.. ..||+|++..
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak 37 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQIL 37 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHH
T ss_pred CEEEEEecCCCCCCCchHHHHH
Confidence 4788999 8999999663
No 160
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=31.02 E-value=14 Score=25.09 Aligned_cols=16 Identities=31% Similarity=0.700 Sum_probs=13.8
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
+|.+|+-+.||+|++.
T Consensus 7 ~v~~y~~~~C~~C~~~ 22 (89)
T 2klx_A 7 EIILYTRPNCPYCKRA 22 (89)
T ss_dssp CEEEESCSCCTTTHHH
T ss_pred eEEEEECCCChhHHHH
Confidence 5788999999999975
No 161
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=30.87 E-value=20 Score=25.44 Aligned_cols=16 Identities=13% Similarity=0.355 Sum_probs=13.0
Q ss_pred EEEEEEE-----ecChhhHHH
Q 040358 45 NLSLYYE-----TLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyE-----SlCPd~~~F 60 (236)
+|.||+- +.||+|++.
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~ 38 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQI 38 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHH
T ss_pred CEEEEEecCCCCCCCccHHHH
Confidence 3777888 899999865
No 162
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=30.16 E-value=32 Score=24.02 Aligned_cols=20 Identities=20% Similarity=0.579 Sum_probs=17.0
Q ss_pred CceEEEEEEEecChhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi 61 (236)
.+..|..||.+-||.|+++.
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~ 38 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNME 38 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHH
T ss_pred CCCEEEEEECCCCHhHHHHH
Confidence 46678889999999999874
No 163
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=29.73 E-value=55 Score=23.74 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=17.6
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++.|..|+-+-||+|+.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~ 61 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEA 61 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEEcccCHhHHHHH
Confidence 467788889999999999875
No 164
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=29.66 E-value=26 Score=24.63 Aligned_cols=16 Identities=19% Similarity=0.521 Sum_probs=13.2
Q ss_pred EEEEEEecChhhHHHH
Q 040358 46 LSLYYETLCPGCAEFI 61 (236)
Q Consensus 46 V~vyyESlCPd~~~Fi 61 (236)
|.+|+-+-||+|+++.
T Consensus 22 vv~f~a~~C~~C~~~~ 37 (116)
T 2e7p_A 22 VVVFSKTYCGYCNRVK 37 (116)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 5569999999999664
No 165
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=29.65 E-value=55 Score=24.69 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=24.4
Q ss_pred CCCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 39 KHNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
.-..|+.|..|+-+-||.|+ .+ ..|...+++ +.+
T Consensus 29 ~~~Gk~vll~F~a~wC~~C~-~~-~~l~~l~~~-~~~ 62 (171)
T 3cmi_A 29 QLKGKVVLIVNVASKCGFTP-QY-KELEALYKR-YKD 62 (171)
T ss_dssp GGTTCEEEEEEEESSSCCHH-HH-HHHHHHHHH-HGG
T ss_pred HcCCCEEEEEEEecCCCcch-hH-HHHHHHHHH-hcc
Confidence 33457788888899999999 54 567766653 554
No 166
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=29.36 E-value=20 Score=26.65 Aligned_cols=17 Identities=6% Similarity=0.290 Sum_probs=12.7
Q ss_pred EEEEEEEe-----cChhhHHHH
Q 040358 45 NLSLYYET-----LCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyES-----lCPd~~~Fi 61 (236)
+|.||..+ .||+|.+-.
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak 42 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVV 42 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHH
T ss_pred CEEEEEecCCCCCccHHHHHHH
Confidence 47788887 788888653
No 167
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=29.09 E-value=78 Score=25.25 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=24.7
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceee
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVN 78 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vd 78 (236)
..++-|..||-+-||.|+.+. ..|..+.+ .+.+.+.
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~-p~l~~l~~-~~~~~v~ 64 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIA-PILDEIAD-EYQGKLT 64 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTTTCE
T ss_pred cCCEEEEEEECCcCHHHHHHH-HHHHHHHH-HhcCCcE
Confidence 467788889999999999885 34444444 3555333
No 168
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=28.95 E-value=60 Score=24.83 Aligned_cols=38 Identities=11% Similarity=0.257 Sum_probs=25.0
Q ss_pred ceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 43 NVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 43 kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
++.|..|+-+-||.|+..+ ..|...++ ++.+. +++++.
T Consensus 47 ~~vlv~F~a~~C~~C~~~~-~~l~~l~~-~~~~~-~v~vv~ 84 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQ-HELVRLAN-DYMPK-GVSFVA 84 (196)
T ss_dssp SEEEEEECCSSCHHHHHHH-HHHHHHHH-HHGGG-TCEEEE
T ss_pred CeEEEEEeCCCCccHHHHH-HHHHHHHH-HHHhC-CcEEEE
Confidence 3477888899999999876 45666655 35442 344443
No 169
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=28.61 E-value=21 Score=26.55 Aligned_cols=17 Identities=18% Similarity=0.252 Sum_probs=14.5
Q ss_pred EEEEEEEe-----cChhhHHHH
Q 040358 45 NLSLYYET-----LCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyES-----lCPd~~~Fi 61 (236)
+|.||..+ .||+|++..
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak 38 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATI 38 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHH
T ss_pred CEEEEEeccCCCCCCccHHHHH
Confidence 58899998 899999874
No 170
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=28.58 E-value=73 Score=22.98 Aligned_cols=28 Identities=14% Similarity=0.381 Sum_probs=20.6
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++.|..||.+-||.|+.+. ..|..+.
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~-p~l~~l~ 63 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIE-RPMEKIA 63 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTH-HHHHHHH
T ss_pred cCCEEEEEEECCcCHhHHHHH-HHHHHHH
Confidence 457788899999999999885 3344333
No 171
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=34.34 E-value=12 Score=25.28 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=17.7
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...+.-|..||..-||+|+.+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~ 38 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIA 38 (106)
Confidence 3456778888899999999874
No 172
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=28.03 E-value=78 Score=25.24 Aligned_cols=41 Identities=15% Similarity=-0.004 Sum_probs=26.7
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
-..||-|..|+-+-||.|+.-+ ..|..+++ ++.+. ++.++-
T Consensus 45 ~~Gk~vlv~FwatwC~~C~~e~-p~l~~l~~-~~~~~-g~~vv~ 85 (208)
T 2f8a_A 45 LRGKVLLIENVASLGGTTVRDY-TQMNELQR-RLGPR-GLVVLG 85 (208)
T ss_dssp GTTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEEE
T ss_pred cCCCEEEEEEECCCCccHHHHH-HHHHHHHH-HccCC-CeEEEE
Confidence 3457888899999999999765 34555554 34443 344443
No 173
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=27.81 E-value=66 Score=24.54 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=21.1
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..|+.|..||-+-||.|+..+ ..|....+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~-~~l~~l~~ 85 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEH-PELTRLAE 85 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHH-HHHHHHHH
Confidence 357778888899999999885 34544443
No 174
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=26.38 E-value=1e+02 Score=23.25 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=22.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
..|+.|-.|+-+-||.|+..+ ..|...++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~-~~l~~l~~ 87 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEM-PALDELQG 87 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHH-HHHHHHHH
Confidence 457788888999999999886 45665555
No 175
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=26.33 E-value=63 Score=24.00 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=17.7
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..|+.|..||-+-||+|+..+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~ 70 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEH 70 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 567788888899999999875
No 176
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=26.14 E-value=32 Score=19.79 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=14.6
Q ss_pred hhcCCCCceeeEEEECCe
Q 040358 183 LHLNPPLEYVPWVTVNNK 200 (236)
Q Consensus 183 ~~l~p~~~~VPwI~ING~ 200 (236)
++++++.+.|||-.|.|-
T Consensus 4 dsMN~pSTKVsWAaVtgg 21 (33)
T 1uvq_C 4 DSMNLPSTKVSWAAVGGG 21 (33)
T ss_pred cccCCCccccceEEecCC
Confidence 467788999999999764
No 177
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=25.96 E-value=28 Score=25.45 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=14.7
Q ss_pred EEEEEEEecChhhHHHH
Q 040358 45 NLSLYYETLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi 61 (236)
+|++|.-..||.|++-.
T Consensus 1 ~i~iY~~~~C~~C~kak 17 (114)
T 1rw1_A 1 TYVLYGIKACDTMKKAR 17 (114)
T ss_dssp CEEEEECSSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHH
Confidence 37899999999999774
No 178
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=25.94 E-value=1.1e+02 Score=23.11 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=27.1
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccceeeEEEEe
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLISIVNLRLIP 83 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lvP 83 (236)
..|+.|..|+-+-||.|+..+ ..|...++ ++.+. +++++-
T Consensus 46 ~gk~vll~F~atwC~~C~~~~-~~l~~l~~-~~~~~-~v~vv~ 85 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNY-TQLVDLHA-RYAEC-GLRILA 85 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEEE
T ss_pred CCCEEEEEEeCCCCCCcHHHH-HHHHHHHH-HHhcC-CeEEEE
Confidence 457888888999999999876 45666665 35542 244443
No 179
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=25.45 E-value=42 Score=24.72 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=22.3
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
...|+.|..||-+-||+|+..+ ..|...++
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~-~~l~~l~~ 65 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSEL-GQAEKWAQ 65 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHH-HHHHHHHT
T ss_pred hCCCEEEEEEECCCCHHHHHHH-HHHHHHHH
Confidence 4457788888899999999886 44555554
No 180
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=25.43 E-value=66 Score=22.92 Aligned_cols=25 Identities=16% Similarity=0.392 Sum_probs=19.5
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLG 66 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~ 66 (236)
..++-|..||-+-||+|+.+.. .|.
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~-~l~ 52 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDK-SLR 52 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHH-HHT
T ss_pred cCCcEEEEEcCCCCHHHHHHHH-HhC
Confidence 3567788899999999999863 344
No 181
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=25.35 E-value=83 Score=23.00 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=21.5
Q ss_pred CCceEEEEEEEecChh-hHHHHHhhhHHHHH
Q 040358 41 NDNVNLSLYYETLCPG-CAEFISEGLGKLFE 70 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd-~~~Fi~~qL~P~~~ 70 (236)
..|+.|..|+-+-||+ |+..+ ..|...++
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~-~~l~~l~~ 51 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEEL-EKMIQVVD 51 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHH-HHHHHHHH
Confidence 4577888888899998 99876 45555554
No 182
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=25.31 E-value=1.2e+02 Score=22.42 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=17.3
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++-|..||-+-||.|+.+.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~ 42 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMD 42 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 356778888999999999885
No 183
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=24.28 E-value=1.2e+02 Score=24.31 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=22.9
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++-|..||-+-||.|+++. ..+..+.+ .+.+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~-p~~~~l~~-~~~~ 61 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFA-PTWXALAE-DVKA 61 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTGG
T ss_pred CCCeEEEEEECCcCHHHHHHH-HHHHHHHH-HHHh
Confidence 347889999999999999985 33444433 3443
No 184
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=23.99 E-value=1.4e+02 Score=21.57 Aligned_cols=33 Identities=6% Similarity=0.103 Sum_probs=24.6
Q ss_pred CCCCceEEEEEEEecChh--hHHHHHhhhHHHHHhcc
Q 040358 39 KHNDNVNLSLYYETLCPG--CAEFISEGLGKLFEKGL 73 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd--~~~Fi~~qL~P~~~~~l 73 (236)
....|+.|..|+-+-||. |+..+ ..|...++ ++
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~-~~l~~l~~-~~ 64 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSN-SELREIYK-KY 64 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHH-HHHHHHHH-HH
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHH-HHHHHHHH-Hh
Confidence 334678888888999999 99886 45666665 35
No 185
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=23.77 E-value=1.2e+02 Score=23.91 Aligned_cols=22 Identities=14% Similarity=0.303 Sum_probs=18.7
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...+|.|..||.+-||.|+++.
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~ 155 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAA 155 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHH
T ss_pred cCCCeEEEEEECCCCcchHHHH
Confidence 4567778889999999999885
No 186
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.69 E-value=30 Score=25.65 Aligned_cols=16 Identities=19% Similarity=0.465 Sum_probs=13.6
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
.|.+|+-.-||+|++.
T Consensus 28 ~vvvf~~~~Cp~C~~~ 43 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTMA 43 (130)
T ss_dssp SEEEEECSSCSHHHHH
T ss_pred cEEEEEcCCChHHHHH
Confidence 4677999999999965
No 187
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=23.51 E-value=1.3e+02 Score=22.44 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=22.4
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
..++-|..||-+-||.|+.+. ..|..+.+ ++.+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~-p~l~~l~~-~~~~ 54 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLD-DILSKTSS-DLSK 54 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHH-HHHHHHHT-TTTT
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HccC
Confidence 457778889999999999875 33333332 3444
No 188
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=23.44 E-value=97 Score=23.83 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=24.5
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhhHHHHHhcccc
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGLGKLFEKGLIS 75 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (236)
-..|+.|..|+-+-||.|+..+ ..|...++ ++.+
T Consensus 46 ~~Gk~vll~F~atwC~~C~~~~-~~l~~l~~-~~~~ 79 (190)
T 2vup_A 46 HKGSPLLIYNVASKCGYTKGGY-ETATTLYN-KYKS 79 (190)
T ss_dssp GTTSCEEEEEECSSSTTHHHHH-HHHHHHHH-HHGG
T ss_pred cCCCEEEEEEecCCCCccHHHH-HHHHHHHH-HHhc
Confidence 3457778888889999999876 45666665 3554
No 189
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=23.41 E-value=75 Score=23.58 Aligned_cols=20 Identities=15% Similarity=0.488 Sum_probs=17.5
Q ss_pred CceEEEEEEEecChhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi 61 (236)
.++.|..||..-||.|+++.
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~ 51 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMN 51 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHH
T ss_pred CCeEEEEEECCCCHhHHHHH
Confidence 67788899999999999875
No 190
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.41 E-value=1e+02 Score=21.63 Aligned_cols=25 Identities=20% Similarity=0.526 Sum_probs=18.0
Q ss_pred EEEEEEEecChhhHHHHHhhhHHHHH
Q 040358 45 NLSLYYETLCPGCAEFISEGLGKLFE 70 (236)
Q Consensus 45 ~V~vyyESlCPd~~~Fi~~qL~P~~~ 70 (236)
-|..||.+-||.|+++. ..|..+.+
T Consensus 25 vlv~f~a~wC~~C~~~~-p~~~~~~~ 49 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQ-PEWESFAE 49 (126)
T ss_dssp EEEEEECSSCHHHHHHH-HHHHHHHH
T ss_pred EEEEEECCCCHHHHHHh-HHHHHHHH
Confidence 47788889999999985 34444443
No 191
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=23.33 E-value=50 Score=24.93 Aligned_cols=32 Identities=6% Similarity=0.075 Sum_probs=22.6
Q ss_pred CCCceEEEEEEEecChhhHHHHHhhh-HHHHHh
Q 040358 40 HNDNVNLSLYYETLCPGCAEFISEGL-GKLFEK 71 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi~~qL-~P~~~~ 71 (236)
...|+-|..|+-+=||.|+.+....+ .|.+.+
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~ 77 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSS 77 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHH
Confidence 44677888899999999998854322 365543
No 192
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=23.01 E-value=98 Score=22.02 Aligned_cols=22 Identities=18% Similarity=0.634 Sum_probs=18.7
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...|+.|..|+-+-||.|+..+
T Consensus 25 ~~gk~vll~F~a~~C~~C~~~~ 46 (142)
T 3ewl_A 25 LKAQYTMLFFYDPDCSNCRKFE 46 (142)
T ss_dssp CCCSEEEEEECCSSCHHHHHHH
T ss_pred cCCCEEEEEEECCCCccHHHHH
Confidence 3467888889999999999985
No 193
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=22.94 E-value=1.3e+02 Score=22.01 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=22.9
Q ss_pred CCCCceEEEEEEEecChh-hHHHHHhhhHHHHH
Q 040358 39 KHNDNVNLSLYYETLCPG-CAEFISEGLGKLFE 70 (236)
Q Consensus 39 ~~~~kV~V~vyyESlCPd-~~~Fi~~qL~P~~~ 70 (236)
.-..|+.|..|+-+-||+ |+..+ ..|...++
T Consensus 23 ~~~gk~vll~F~~~~C~~~C~~~~-~~l~~l~~ 54 (171)
T 2rli_A 23 DFRGQWVLMYFGFTHCPDICPDEL-EKLVQVVR 54 (171)
T ss_dssp TTTTSEEEEEEECTTCSSSHHHHH-HHHHHHHH
T ss_pred HhCCCEEEEEEEcCCCCchhHHHH-HHHHHHHH
Confidence 334578888999999998 99876 44555554
No 194
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=22.94 E-value=1.1e+02 Score=22.06 Aligned_cols=20 Identities=25% Similarity=0.499 Sum_probs=16.8
Q ss_pred CceEEEEEEEecChhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi 61 (236)
.++-|..||-+-||.|+.+.
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~ 50 (134)
T 2fwh_A 31 GKPVMLDLYADWCVACKEFE 50 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHH
Confidence 56778888899999999875
No 195
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=22.30 E-value=89 Score=28.67 Aligned_cols=22 Identities=18% Similarity=0.684 Sum_probs=18.9
Q ss_pred CCCceEEEEEEEecChhhHHHH
Q 040358 40 HNDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 40 ~~~kV~V~vyyESlCPd~~~Fi 61 (236)
...+++|.+|+..-||+|+...
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~ 136 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVV 136 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHH
T ss_pred cCCCcceEEEECCCCcCcHHHH
Confidence 3467899999999999999763
No 196
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=22.28 E-value=92 Score=24.56 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=21.3
Q ss_pred CCCceEEEEEEEe-cChhhHHHHHhhhHHHHHh
Q 040358 40 HNDNVNLSLYYET-LCPGCAEFISEGLGKLFEK 71 (236)
Q Consensus 40 ~~~kV~V~vyyES-lCPd~~~Fi~~qL~P~~~~ 71 (236)
...+|.|.+|+.. -||.|... .++.|.|.+
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c--~~~~~~~~~ 49 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTA--EELLKETVE 49 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHH--HHHHHHHHH
T ss_pred ccCCeEEEEEccCCCCcccHHH--HHHHHHHHH
Confidence 3567888888766 58888765 467777763
No 197
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=21.83 E-value=1.4e+02 Score=21.27 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=19.8
Q ss_pred CceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 42 DNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 42 ~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
.++-|..||-+-||.|+.+. ..|....
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~-~~l~~l~ 72 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIA-PYYIELS 72 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred CCEEEEEEECCCCHHHHHHH-HHHHHHH
Confidence 56777888889999999886 3344433
No 198
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=21.36 E-value=43 Score=22.98 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=20.3
Q ss_pred CCceEEEEEEEecChhhHHHHHhhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFISEGLGKLF 69 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi~~qL~P~~ 69 (236)
..++-|..||..-||.|+++. ..+....
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~-~~~~~~~ 50 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALA-PEYAKAA 50 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTH-HHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHhh-HHHHHHH
Confidence 356778899999999999875 3344333
No 199
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=21.22 E-value=1.1e+02 Score=25.05 Aligned_cols=21 Identities=19% Similarity=0.461 Sum_probs=18.0
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++.|.+||-+-||+|++..
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~ 157 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAV 157 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHH
T ss_pred CCCcEEEEEECCCCCCcHHHH
Confidence 467899999999999999664
No 200
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=20.57 E-value=38 Score=25.92 Aligned_cols=16 Identities=19% Similarity=0.465 Sum_probs=13.8
Q ss_pred EEEEEEEecChhhHHH
Q 040358 45 NLSLYYETLCPGCAEF 60 (236)
Q Consensus 45 ~V~vyyESlCPd~~~F 60 (236)
.|.+|+-.-||+|++.
T Consensus 50 ~Vvvf~~~~Cp~C~~~ 65 (146)
T 2ht9_A 50 CVVIFSKTSCSYCTMA 65 (146)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCChhHHHH
Confidence 4777999999999965
No 201
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=20.38 E-value=38 Score=25.83 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=13.6
Q ss_pred EEEEEEE-----ecChhhHHHH
Q 040358 45 NLSLYYE-----TLCPGCAEFI 61 (236)
Q Consensus 45 ~V~vyyE-----SlCPd~~~Fi 61 (236)
+|.||.- ..||+|++..
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak 57 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAV 57 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHH
T ss_pred CEEEEEEecCCCCCCccHHHHH
Confidence 5888888 6899999653
No 202
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=20.20 E-value=1.4e+02 Score=23.30 Aligned_cols=21 Identities=14% Similarity=0.509 Sum_probs=17.8
Q ss_pred CCceEEEEEEEecChhhHHHH
Q 040358 41 NDNVNLSLYYETLCPGCAEFI 61 (236)
Q Consensus 41 ~~kV~V~vyyESlCPd~~~Fi 61 (236)
..++-|..||.+-||.|+.+.
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~ 133 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLA 133 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHH
T ss_pred cCCcEEEEEeCCCChhHHHHH
Confidence 456778889999999999885
Done!