BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040360
MLEKSSSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSW
NEKLVIELPMHARFITVQVQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHF
LSYRLRNAKGDKNGIINVSVRSLKVAADQHASSSNYLSKAPRLNVQGYVPAYSGFASGFG
APVGGVVTGVPVWCANRA

High Scoring Gene Products

Symbol, full name Information P value
BAP2
AT2G45760
protein from Arabidopsis thaliana 1.4e-25
BAP1
BON association protein 1
protein from Arabidopsis thaliana 6.5e-19
AT2G13350 protein from Arabidopsis thaliana 2.9e-07
AT1G04540 protein from Arabidopsis thaliana 0.00015
AT5G23950 protein from Arabidopsis thaliana 0.00060

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040360
        (198 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2050782 - symbol:BAP2 "AT2G45760" species:3702...   290  1.4e-25   1
TAIR|locus:2098931 - symbol:BAP1 "BON association protein...   227  6.5e-19   1
TAIR|locus:2041654 - symbol:AT2G13350 "AT2G13350" species...   125  2.9e-07   1
TAIR|locus:2197868 - symbol:AT1G04540 "AT1G04540" species...   113  0.00015   1
TAIR|locus:2172828 - symbol:AT5G23950 "AT5G23950" species...   103  0.00060   1


>TAIR|locus:2050782 [details] [associations]
            symbol:BAP2 "AT2G45760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] InterPro:IPR000008 InterPro:IPR008973 SMART:SM00239
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0016020
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AC004665 HOGENOM:HOG000243257
            ProtClustDB:CLSN2917483 EMBL:AY954839 EMBL:AY262052 EMBL:BT025263
            IPI:IPI00525177 PIR:T02471 RefSeq:NP_182100.2 UniGene:At.36596
            ProteinModelPortal:Q58FX0 IntAct:Q58FX0 STRING:Q58FX0
            EnsemblPlants:AT2G45760.1 GeneID:819184 KEGG:ath:AT2G45760
            TAIR:At2g45760 eggNOG:NOG242436 InParanoid:Q58FX0 OMA:GVPVWCA
            PhylomeDB:Q58FX0 Genevestigator:Q58FX0 Uniprot:Q58FX0
        Length = 207

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 63/156 (40%), Positives = 101/156 (64%)

Query:    10 RTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELP 69
             R++E+ V+S E L++DR+ +KK  +++V+ D       +KVDE GGS+P W ++  +E+P
Sbjct:     8 RSLEIEVISAEGLKVDRKPLKKKTYSVVRIDEKS--WASKVDELGGSYPIWKDRFDMEMP 65

Query:    70 MHA--RFITVQVQCXXXXXXXXXXXXXXXIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127
             ++A  RFI+++V                  VG+A+IPV+DF+GG+AP+ +L+FLSYRLR+
Sbjct:    66 INASVRFISIEVYYRTSGSGRDKN------VGYAKIPVTDFMGGFAPQGHLNFLSYRLRD 119

Query:   128 AKGDKNGIINVSVRSLKVAADQHASS--SNYLSKAP 161
               GDK GI+NVS+  +K   + H SS  S+  + AP
Sbjct:   120 EYGDKCGIVNVSIM-VKPDGNDHKSSLPSSSFAVAP 154


>TAIR|locus:2098931 [details] [associations]
            symbol:BAP1 "BON association protein 1" species:3702
            "Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0009266 "response
            to temperature stimulus" evidence=IEP] [GO:0019725 "cellular
            homeostasis" evidence=IPI] [GO:0005543 "phospholipid binding"
            evidence=IDA] [GO:0009408 "response to heat" evidence=IEP]
            [GO:0009409 "response to cold" evidence=IEP] [GO:0009611 "response
            to wounding" evidence=IEP;RCA] [GO:0009751 "response to salicylic
            acid stimulus" evidence=IEP] [GO:0016020 "membrane" evidence=IDA]
            [GO:0031348 "negative regulation of defense response" evidence=IMP]
            [GO:0009612 "response to mechanical stimulus" evidence=RCA]
            [GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009753
            "response to jasmonic acid stimulus" evidence=RCA] [GO:0010200
            "response to chitin" evidence=RCA] [GO:0010286 "heat acclimation"
            evidence=RCA] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952
            GO:GO:0009611 GO:GO:0031348 GO:GO:0016020 GO:GO:0005543
            GO:GO:0009409 GO:GO:0009751 GO:GO:0009408 GO:GO:0019725
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL137898 EMBL:AY045765
            EMBL:AK117234 EMBL:BT003727 EMBL:AY087007 IPI:IPI00524784
            PIR:T47911 RefSeq:NP_001190150.1 RefSeq:NP_567111.1
            UniGene:At.26443 UniGene:At.74036 ProteinModelPortal:Q941L2
            SMR:Q941L2 IntAct:Q941L2 STRING:Q941L2 EnsemblPlants:AT3G61190.1
            GeneID:825291 KEGG:ath:AT3G61190 TAIR:At3g61190 eggNOG:NOG304271
            HOGENOM:HOG000243257 InParanoid:Q941L2 OMA:GRYSPEG PhylomeDB:Q941L2
            ProtClustDB:CLSN2917483 Genevestigator:Q941L2 Uniprot:Q941L2
        Length = 192

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 51/132 (38%), Positives = 82/132 (62%)

Query:    10 RTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCT-TKVDESGGSHPSWNEKLVIEL 68
             +T+E+ + S E L+++RR IKK  FA+V+ D   + C  + +DES  S+P+WN K  + +
Sbjct:    18 KTLEIDLRSAEGLKLNRRPIKKKTFAVVKID---EKCRKSNLDESRRSNPTWNYKSEMPI 74

Query:    69 PMHARFITVQVQCXXXXXXXXXXXXXXXIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA 128
               + +FI ++V                  +G A+IP +DF+G Y+PE +L+FLSYRLR+ 
Sbjct:    75 NGNEQFIFIEV-------FYRTGSGHDKKIGEAKIPTNDFMGRYSPEGHLNFLSYRLRDE 127

Query:   129 KGDKNGIINVSV 140
              GDK GI+N+S+
Sbjct:   128 FGDKCGIVNLSI 139


>TAIR|locus:2041654 [details] [associations]
            symbol:AT2G13350 "AT2G13350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006944 "cellular membrane
            fusion" evidence=RCA] InterPro:IPR000008 InterPro:IPR008973
            Pfam:PF00168 SMART:SM00239 EMBL:CP002685 SUPFAM:SSF49562
            EMBL:AC007209 EMBL:AC006446 EMBL:BT005348 EMBL:AK118570
            IPI:IPI00536425 PIR:A84507 RefSeq:NP_178968.1 UniGene:At.40669
            ProteinModelPortal:Q9SI42 SMR:Q9SI42 STRING:Q9SI42
            EnsemblPlants:AT2G13350.1 GeneID:815821 KEGG:ath:AT2G13350
            TAIR:At2g13350 HOGENOM:HOG000114072 InParanoid:Q9SI42 OMA:NICGIEC
            PhylomeDB:Q9SI42 ProtClustDB:CLSN2912990 ArrayExpress:Q9SI42
            Genevestigator:Q9SI42 Uniprot:Q9SI42
        Length = 401

 Score = 125 (49.1 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 32/129 (24%), Positives = 61/129 (47%)

Query:    12 IELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMH 71
             +EL ++S ++L    R +K  A A +  +      TT+VD +GG+ P+WN+K V  L   
Sbjct:    10 LELNIISAQELAPVARCMKTYAIAWIDPERKL---TTRVDNTGGTSPTWNDKFVFRLDEE 66

Query:    72 ARFITVQVQCXXXXXXXXXXXXXXXIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGD 131
             A +    +                  VG  +  +SD +   +P + + F++  +  A G 
Sbjct:    67 ALYDATSIVVIEIYALHWFKDIH---VGTVQALISDLV---SPSSAMRFVTLEVLRASGR 120

Query:   132 KNGIINVSV 140
              +G++N++V
Sbjct:   121 PHGLLNIAV 129


>TAIR|locus:2197868 [details] [associations]
            symbol:AT1G04540 "AT1G04540" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0016020
            "membrane" evidence=IDA] InterPro:IPR000008 InterPro:IPR008973
            Pfam:PF00168 SMART:SM00239 EMBL:CP002684 GO:GO:0016020
            SUPFAM:SSF49562 IPI:IPI00546706 RefSeq:NP_171948.1 UniGene:At.42444
            ProteinModelPortal:F4I5P7 SMR:F4I5P7 EnsemblPlants:AT1G04540.1
            GeneID:839498 KEGG:ath:AT1G04540 OMA:TPMRSNI ArrayExpress:F4I5P7
            Uniprot:F4I5P7
        Length = 601

 Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
 Identities = 38/146 (26%), Positives = 65/146 (44%)

Query:     9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIEL 68
             ++ +EL ++S +DL    R  K  A A V ++      TT+VD +GG++P+WN+K V  +
Sbjct:     8 FQLLELNIISAQDLAPVARKTKTYAVAWVHSERKL---TTRVDYNGGTNPTWNDKFVFRV 64

Query:    69 PMHARFITVQVQCXXXXXXXXXXXXXXXIVGFARIPVSDFIG-----GYAPEN--Y---- 117
               +  F+                      VG  R+ +S+ I      GY   N  Y    
Sbjct:    65 --NEEFLYADTSAVVIEIYALHWFRDVH-VGTVRVLISNLIPPNRRPGYRTSNNEYRRTP 121

Query:   118 ---LHFLSYRLRNAKGDKNGIINVSV 140
                + F++ ++R   G   GI+N+ V
Sbjct:   122 PPGMRFVALQVRRTSGRPQGILNIGV 147


>TAIR|locus:2172828 [details] [associations]
            symbol:AT5G23950 "AT5G23950" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002688 SUPFAM:SSF49562 EMBL:BT020351
            IPI:IPI00516888 RefSeq:NP_197783.2 UniGene:At.30986
            ProteinModelPortal:Q5PNU6 PaxDb:Q5PNU6 PRIDE:Q5PNU6
            EnsemblPlants:AT5G23950.1 GeneID:832460 KEGG:ath:AT5G23950
            eggNOG:NOG237651 OMA:GASYVED ProtClustDB:CLSN2918243
            Genevestigator:Q5PNU6 Uniprot:Q5PNU6
        Length = 219

 Score = 103 (41.3 bits), Expect = 0.00060, P = 0.00060
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:     5 SSSGYRTIELTVLSGEDLR-IDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEK 63
             SS G R +E+T+ S +D++ ++ R      +A+V  D  F   +T+VDE G +  +WNE 
Sbjct:     2 SSHG-REVEVTISSAKDIKNVNWRNGPNKPYAVVWIDPKFK-SSTRVDEDGNTCTTWNET 59

Query:    64 LVIELP 69
              VI LP
Sbjct:    60 FVIALP 65


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      198       168   0.00079  108 3  11 22  0.38    32
                                                     31  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.64u 0.13s 12.77t   Elapsed:  00:00:01
  Total cpu time:  12.64u 0.13s 12.77t   Elapsed:  00:00:01
  Start:  Fri May 10 15:21:34 2013   End:  Fri May 10 15:21:35 2013

Back to top