Query 040360
Match_columns 198
No_of_seqs 150 out of 1306
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 12:09:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 1.2E-24 4.1E-29 165.5 14.9 130 3-147 3-132 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.9 3.1E-23 1.1E-27 158.4 18.7 124 5-145 2-133 (140)
3 3kwu_A MUNC13-1; calcium bindi 99.9 3.7E-23 1.3E-27 159.6 18.1 126 2-145 9-147 (148)
4 2ep6_A MCTP2 protein; beta san 99.9 1.8E-23 6.3E-28 158.8 12.6 121 6-144 9-131 (133)
5 3m7f_B E3 ubiquitin-protein li 99.9 1.3E-22 4.6E-27 161.3 16.6 133 5-146 3-142 (176)
6 3b7y_A E3 ubiquitin-protein li 99.9 2.8E-22 9.7E-27 155.4 16.5 129 7-144 17-152 (153)
7 2fk9_A Protein kinase C, ETA t 99.9 1.9E-22 6.4E-27 159.7 13.4 124 4-144 23-156 (157)
8 1gmi_A Protein kinase C, epsil 99.9 2E-22 7E-27 153.9 13.0 120 7-145 3-133 (136)
9 2nq3_A Itchy homolog E3 ubiqui 99.9 1.3E-21 4.5E-26 156.5 15.5 126 8-145 34-161 (173)
10 1rlw_A Phospholipase A2, CALB 99.9 1.6E-21 5.5E-26 146.1 14.8 116 9-141 2-122 (126)
11 2cjt_A UNC-13 homolog A, MUNC1 99.9 6.8E-22 2.3E-26 151.3 12.4 122 7-144 2-131 (131)
12 3pyc_A E3 ubiquitin-protein li 99.9 2.7E-21 9.1E-26 146.6 14.8 124 8-141 3-130 (132)
13 2cjs_A UNC-13 homolog A, MUNC1 99.8 5.4E-20 1.8E-24 146.6 15.5 124 9-149 13-145 (167)
14 2b3r_A Phosphatidylinositol-4- 99.8 3E-19 1E-23 136.3 14.4 106 8-127 18-130 (134)
15 1a25_A CALB, protein kinase C 99.8 3E-19 1E-23 138.0 13.2 105 9-127 30-139 (149)
16 2d8k_A Synaptotagmin VII; exoc 99.8 3.9E-19 1.3E-23 136.0 13.6 108 8-128 24-136 (141)
17 1rsy_A Synaptotagmin I; calciu 99.8 5.1E-19 1.8E-23 137.3 14.3 108 8-128 40-151 (152)
18 3rdl_A Protein kinase C alpha 99.8 3.2E-19 1.1E-23 135.1 12.7 106 9-128 15-125 (137)
19 3f04_A Synaptotagmin-1; C2A, c 99.8 2.5E-19 8.6E-24 137.2 12.0 107 8-127 32-142 (143)
20 1ugk_A Synaptotagmin IV, KIAA1 99.8 6.6E-19 2.3E-23 134.3 13.6 108 8-127 20-133 (138)
21 1v27_A Regulating synaptic mem 99.8 1.7E-19 5.9E-24 137.2 9.9 114 9-134 20-141 (141)
22 2dmg_A KIAA1228 protein; beta- 99.8 2.3E-19 7.8E-24 137.3 10.6 115 8-134 22-142 (142)
23 2bwq_A Regulating synaptic mem 99.8 5.5E-19 1.9E-23 132.7 12.5 106 8-125 16-128 (129)
24 1rh8_A Piccolo protein; beta-s 99.8 1.1E-19 3.8E-24 138.9 7.8 108 9-129 17-140 (142)
25 3fbk_A RGS3, RGP3, regulator o 99.8 2.4E-19 8.4E-24 139.4 9.8 119 8-138 25-148 (153)
26 2q3x_A Regulating synaptic mem 99.8 6E-19 2.1E-23 140.0 12.1 108 9-129 29-141 (171)
27 3fdw_A Synaptotagmin-like prot 99.8 3.5E-19 1.2E-23 137.5 10.3 108 9-129 22-136 (148)
28 2chd_A Rabphilin-3A, exophilin 99.8 1.1E-18 3.7E-23 133.5 12.9 107 8-127 27-140 (142)
29 2r83_A Synaptotagmin-1; C2A-C2 99.8 3.1E-18 1E-22 144.6 16.6 124 8-145 17-147 (284)
30 2z0u_A WW domain-containing pr 99.8 4.5E-19 1.5E-23 139.3 10.0 106 9-126 42-154 (155)
31 3n5a_A Synaptotagmin-7; calciu 99.8 1.2E-18 4E-23 132.0 11.9 94 8-109 14-113 (138)
32 2enp_A B/K protein; C2 type 1, 99.8 5.4E-19 1.8E-23 136.1 10.0 107 8-127 24-141 (147)
33 3l9b_A Otoferlin; C2-domain, b 99.8 3.3E-18 1.1E-22 133.2 14.3 116 10-145 21-140 (144)
34 2cm5_A Rabphilin-3A; protein t 99.8 4.6E-18 1.6E-22 133.7 13.1 94 8-109 35-134 (166)
35 1tjx_A Similar to synaptotagmi 99.8 4.7E-18 1.6E-22 132.6 13.0 109 8-127 23-147 (159)
36 1wfm_A Synaptotagmin XIII; C2 99.8 4.8E-18 1.6E-22 130.1 12.8 105 8-128 24-133 (138)
37 1w15_A Synaptotagmin IV; metal 99.8 6.4E-18 2.2E-22 130.9 12.8 92 8-107 28-125 (153)
38 1djx_A PLC-D1, phosphoinositid 99.7 5.8E-17 2E-21 152.4 17.4 121 8-144 495-623 (624)
39 3jzy_A Intersectin 2; C2 domai 99.7 1.8E-17 6.1E-22 150.4 13.0 122 8-144 385-507 (510)
40 1dqv_A Synaptotagmin III; beta 99.7 5.4E-17 1.9E-21 138.6 14.4 125 8-145 18-149 (296)
41 3nsj_A Perforin-1; pore formin 99.7 1.7E-16 5.9E-21 147.0 15.1 113 9-148 393-507 (540)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.3E-15 7.7E-20 126.9 13.1 112 9-128 149-273 (284)
43 1cjy_A CPLA2, protein (cytosol 99.6 4.7E-15 1.6E-19 141.8 12.4 106 8-127 16-126 (749)
44 3bxj_A RAS GTPase-activating p 99.6 8.5E-17 2.9E-21 147.0 -1.0 122 8-146 9-158 (483)
45 3qr0_A Phospholipase C-beta (P 99.5 9.9E-14 3.4E-18 133.7 15.4 112 9-144 649-770 (816)
46 1dqv_A Synaptotagmin III; beta 99.5 5.7E-15 1.9E-19 126.0 5.5 94 9-110 151-250 (296)
47 3ohm_B 1-phosphatidylinositol- 99.5 1.2E-13 4E-18 134.1 13.8 113 9-145 724-845 (885)
48 2zkm_X 1-phosphatidylinositol- 99.5 2.6E-13 9E-18 130.7 15.3 112 9-144 677-798 (799)
49 3pfq_A PKC-B, PKC-beta, protei 99.4 6.5E-13 2.2E-17 125.2 11.6 107 8-128 170-281 (674)
50 1yrk_A NPKC-delta, protein kin 99.2 5.6E-10 1.9E-14 84.7 12.3 120 4-143 1-124 (126)
51 2enj_A NPKC-theta, protein kin 99.1 6.1E-10 2.1E-14 85.6 9.7 122 3-144 3-129 (138)
52 2yrb_A Protein fantom; beta sa 97.5 0.0009 3.1E-08 52.4 10.5 123 9-147 17-152 (156)
53 3l4c_A Dedicator of cytokinesi 96.3 0.14 4.8E-06 42.0 13.8 60 44-107 77-139 (220)
54 3hhm_A Phosphatidylinositol-4, 95.4 0.16 5.4E-06 50.5 12.3 95 9-109 354-456 (1091)
55 2wxf_A Phosphatidylinositol-4, 94.9 0.29 9.8E-06 48.0 12.5 95 9-108 216-324 (940)
56 1e7u_A Phosphatidylinositol 3- 90.5 1.9 6.6E-05 42.3 11.1 95 10-109 218-331 (961)
57 2y3a_A Phosphatidylinositol-4, 89.7 0.37 1.3E-05 48.0 5.4 70 9-82 352-429 (1092)
58 2qzq_A Axin interactor, dorsal 76.1 7.5 0.00026 29.9 6.5 92 11-111 15-116 (152)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.92 E-value=1.2e-24 Score=165.49 Aligned_cols=130 Identities=20% Similarity=0.268 Sum_probs=111.6
Q ss_pred CCCCCcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeC
Q 040360 3 EKSSSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCK 82 (198)
Q Consensus 3 ~~~~m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~ 82 (198)
+++.+..+.|+|+|++|++|+..+..++.||||+|++++ ++++|+++++++.||+|||+|.|.+......|.|+|||+
T Consensus 3 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~ 80 (136)
T 1wfj_A 3 SGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT--QDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDK 80 (136)
T ss_dssp CCCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS--CEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCS
T ss_pred CCCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC--ccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEEC
Confidence 456778899999999999999878788999999999998 678999998445999999999999987678999999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEEEeeeCC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVRSLKVAA 147 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f~~~~ 147 (198)
+. ++ +|++||++.|+|.++.... .....||+|. +.++..|+|+|+++ |.+..
T Consensus 81 ~~---~~----~d~~lG~~~i~l~~l~~~~----~~~~~w~~L~-~~~~~~G~i~l~l~-~~p~~ 132 (136)
T 1wfj_A 81 DV---GT----EDDAVGEATIPLEPVFVEG----SIPPTAYNVV-KDEEYKGEIWVALS-FKPSG 132 (136)
T ss_dssp SS---CT----TTCCSEEEEEESHHHHHHS----EEEEEEEEEE-ETTEEEEEEEEEEE-EEECC
T ss_pred CC---CC----CCceEEEEEEEHHHhccCC----CCCcEEEEee-cCCccCEEEEEEEE-EEeCC
Confidence 87 66 3999999999999995432 2356799998 66789999999999 87543
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.91 E-value=3.1e-23 Score=158.35 Aligned_cols=124 Identities=24% Similarity=0.334 Sum_probs=104.5
Q ss_pred CCCcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecC----CCcEEEEEEE
Q 040360 5 SSSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPM----HARFITVQVQ 80 (198)
Q Consensus 5 ~~m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~----~~~~L~~eV~ 80 (198)
+....+.|.|+|++|++|+..+. ++.||||++++++ ++++|++++++ .||+|||+|.|.+.. ....|.|+||
T Consensus 2 ~s~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~--~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~~~l~i~V~ 77 (140)
T 2dmh_A 2 SSGSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD--EKKKTKKVDNE-LNPVWNEILEFDLRGIPLDFSSSLGIIVK 77 (140)
T ss_dssp CSCBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS--CEEECCCCCSC-SSCEEEEEEEEECSSCCCCTTCEEEEEEE
T ss_pred CCCCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC--EeEEeeeecCC-CCCccCcEEEEEecccccCCCCEEEEEEE
Confidence 44566899999999999987776 8999999999998 78999999876 999999999999964 3579999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEE---eeCCCC-CccEEEEEEEEEeee
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYR---LRNAKG-DKNGIINVSVRSLKV 145 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~---L~~~~G-k~~G~I~lsi~~f~~ 145 (198)
|++. ++ +|++||++.|+|.++..+. ....||+ |.+..+ +.+|+|+|+++ |.+
T Consensus 78 d~d~---~~----~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~~~G~l~l~~~-~~p 133 (140)
T 2dmh_A 78 DFET---IG----QNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQDTGATIDLVIG-YDP 133 (140)
T ss_dssp ETTC---SS----SCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCEEEEEEEEEEE-ECC
T ss_pred ECCC---CC----CCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCCCCCEEEEEEE-EEC
Confidence 9987 66 3899999999999997653 1345776 877665 46899999999 874
No 3
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.91 E-value=3.7e-23 Score=159.57 Aligned_cols=126 Identities=20% Similarity=0.285 Sum_probs=103.7
Q ss_pred CCCCCCcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEe
Q 040360 2 LEKSSSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQC 81 (198)
Q Consensus 2 ~~~~~m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~ 81 (198)
+.+..+..+.|.|+|++|++|+..+..+++||||++.++. ++++|++++++ .||.|||+|.|.+......|.|+|||
T Consensus 9 ~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~t-~nP~Wne~f~f~v~~~~~~l~~~v~d 85 (148)
T 3kwu_A 9 LDGTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK--TKKRTKTIYGN-LNPVWEENFHFECHNSSDRIKVRVLD 85 (148)
T ss_dssp ------CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT--EEEECCCCCSC-SSCEEEEEEEEEECSTTCEEEEEEEE
T ss_pred cccccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC--EEEECCccCCC-CCCCcccEEEEEecCCCCEEEEEEEE
Confidence 4567778899999999999999877788999999999987 88999999987 99999999999998767899999999
Q ss_pred CCCCCCC-----------CCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCC--CCccEEEEEEEEEeee
Q 040360 82 KSKSSSS-----------GNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAK--GDKNGIINVSVRSLKV 145 (198)
Q Consensus 82 ~~~~~~~-----------g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~--Gk~~G~I~lsi~~f~~ 145 (198)
++. + + +|++||++.|+|.++..+ ...||.|.... ++..|.|+|++. |+-
T Consensus 86 ~d~---~~~~~~~~~~~~~----~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~l~-~e~ 147 (148)
T 3kwu_A 86 EDD---DIKSRVKQRFKRE----SDDFLGQTIIEVRTLSGE-------MDVWYNLDKRTDKSAVSGAIRLHIS-VEI 147 (148)
T ss_dssp CCC---SHHHHHHTTTSSC----SSEEEEEEEEEGGGCCSE-------EEEEEECBCSSTTCCCCCEEEEEEE-EEC
T ss_pred CCC---CccccccccccCC----CCccEEEEEEEHHHCcCC-------CCEEEEcccCCCCCCCceEEEEEEE-EEe
Confidence 886 4 4 399999999999999321 35799998643 347899999999 863
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.90 E-value=1.8e-23 Score=158.77 Aligned_cols=121 Identities=19% Similarity=0.261 Sum_probs=105.0
Q ss_pred CCcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeCCCC
Q 040360 6 SSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCKSKS 85 (198)
Q Consensus 6 ~m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~~~~ 85 (198)
....+.|+|+|++|++|+..+..+++||||++++++ ++++|++++++ .||.|||+|.|.+......|.|+|||++.
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~t-~nP~wne~f~f~~~~~~~~l~i~V~d~d~- 84 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN--DRLQTHTVYKN-LNPEWNKVFTFPIKDIHDVLEVTVFDEDG- 84 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT--EEEECCCCSSC-SSCCCCEEEEEEESCTTCEEEEEEEEEET-
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC--EEEEeeeecCC-CCCccccEEEEEecCCCCEEEEEEEECCC-
Confidence 345689999999999999877788999999999998 78899999986 99999999999998767899999999987
Q ss_pred CCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCC--CCccEEEEEEEEEee
Q 040360 86 SSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAK--GDKNGIINVSVRSLK 144 (198)
Q Consensus 86 ~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~--Gk~~G~I~lsi~~f~ 144 (198)
.+ +|++||++.|+|.++..+. ..||+|.+.+ ++..|+|+|+++ |.
T Consensus 85 --~~----~~~~lG~~~i~l~~l~~~~-------~~w~~L~~~~~~~~~~G~i~l~i~-~~ 131 (133)
T 2ep6_A 85 --DK----PPDFLGKVAIPLLSIRDGQ-------PNCYVLKNKDLEQAFKGVIYLEMD-LI 131 (133)
T ss_dssp --TE----EEEECCBCEEEGGGCCSSC-------CEECCCBCSCTTSCCSSEEEEEEE-EE
T ss_pred --CC----CCCeeEEEEEEHHHccCCC-------ceEEEeecCCCCCccceEEEEEEE-EE
Confidence 65 3899999999999997542 2689998765 358899999999 64
No 5
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.90 E-value=1.3e-22 Score=161.35 Aligned_cols=133 Identities=16% Similarity=0.251 Sum_probs=102.6
Q ss_pred CCCcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCC----cEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEE
Q 040360 5 SSSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSF----DYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQ 80 (198)
Q Consensus 5 ~~m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~----~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~ 80 (198)
.+-..+.|.|+|++|++|+..+..+++||||+|++.+.. .+++|++++++ .||.|||+|.|.+......|.|+||
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t-~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKS-LNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSC-SSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCC-CCCcccceEEEEEcCCCCEEEEEEE
Confidence 345679999999999999887778899999999998632 46899999975 9999999999999876789999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCC-CCceEeEEEEeeCC--CCCccEEEEEEEEEeeeC
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAP-ENYLHFLSYRLRNA--KGDKNGIINVSVRSLKVA 146 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~-~~~~~~~sy~L~~~--~Gk~~G~I~lsi~~f~~~ 146 (198)
|++. ++ +|++||++.|+|.++..+... +......||.|... .++.+|+|+|+++ |.+.
T Consensus 82 d~d~---~~----~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~-~~p~ 142 (176)
T 3m7f_B 82 DENR---LT----RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMT-YLPK 142 (176)
T ss_dssp ECC-----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEE-ECC-
T ss_pred ECCC---CC----CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEE-EEeC
Confidence 9987 66 389999999999999876421 11122369998864 4567899999999 8765
No 6
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.89 E-value=2.8e-22 Score=155.37 Aligned_cols=129 Identities=14% Similarity=0.237 Sum_probs=100.7
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCC----cEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeC
Q 040360 7 SGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSF----DYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCK 82 (198)
Q Consensus 7 m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~----~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~ 82 (198)
...+.|+|+|++|++|+..+..++.||||+|++.++. .+++|++++++ .||+|||+|.|.+......|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKS-LNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSC-SSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCC-CCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 3458999999999999887777899999999998521 47899999986 999999999999987778999999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCC-CceEeEEEEeeCCC--CCccEEEEEEEEEee
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPE-NYLHFLSYRLRNAK--GDKNGIINVSVRSLK 144 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~-~~~~~~sy~L~~~~--Gk~~G~I~lsi~~f~ 144 (198)
+. ++ +|++||++.|+|.++..+.... ..+...||.|...+ ++..|+|+|++. |.
T Consensus 96 d~---~~----~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~-~~ 152 (153)
T 3b7y_A 96 NR---LT----RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMT-YL 152 (153)
T ss_dssp CS---SS----CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEE-EC
T ss_pred CC---Cc----CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEE-Ee
Confidence 87 66 3899999999999998764210 12234799997643 467899999999 75
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.89 E-value=1.9e-22 Score=159.71 Aligned_cols=124 Identities=12% Similarity=0.138 Sum_probs=99.8
Q ss_pred CCCCcceEEEEEEEEeeCCCCCCC----------CCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCc
Q 040360 4 KSSSGYRTIELTVLSGEDLRIDRR----------LIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHAR 73 (198)
Q Consensus 4 ~~~m~~~~LeVtVlsA~~L~~~~~----------~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~ 73 (198)
+..+..+.|.|+|++|++|+..+. .+..||||+|+++. ....+|++.+++ .||+|||+|.|.+.. ..
T Consensus 23 ~~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~kT~v~~kt-lnP~WNE~F~f~v~~-~~ 99 (157)
T 2fk9_A 23 GTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQTSTKQKT-NKPTYNEEFCANVTD-GG 99 (157)
T ss_dssp -CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEECCCCSSC-SSCEEEEEEEEEEEE-EC
T ss_pred hhccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEEeeecCCC-CCCccCcEEEEEcCC-CC
Confidence 344566899999999999986542 25689999999988 445799998886 999999999999975 46
Q ss_pred EEEEEEEeCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEEEee
Q 040360 74 FITVQVQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVRSLK 144 (198)
Q Consensus 74 ~L~~eV~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f~ 144 (198)
.|.|+|||++. ++ +|++||.+.|||.++..+.. +......||+|. ++|.|+|.+. |.
T Consensus 100 ~L~~~V~D~d~---~~----~dd~iG~~~i~l~~l~~~~~-~~~~~~~W~~L~-----~~G~i~l~l~-~~ 156 (157)
T 2fk9_A 100 HLELAVFHETP---LG----YDHFVANCTLQFQELLRTTG-ASDTFEGWVDLE-----PEGKVFVVIT-LT 156 (157)
T ss_dssp EEEEEEEECCS---SS----SCEEEEEEEEEHHHHHHHHT-TCSEEEEEEECB-----SSCEEEEEEE-EC
T ss_pred EEEEEEEECCC---CC----CCCEEEEEEEEHHHhhcccC-CCCcccEEEECC-----CCcEEEEEEE-EE
Confidence 89999999987 66 38999999999999986510 112457899995 3899999998 75
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.89 E-value=2e-22 Score=153.86 Aligned_cols=120 Identities=13% Similarity=0.183 Sum_probs=98.5
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCc-----------CCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEE
Q 040360 7 SGYRTIELTVLSGEDLRIDRRLIK-----------KNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFI 75 (198)
Q Consensus 7 m~~~~LeVtVlsA~~L~~~~~~~~-----------~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L 75 (198)
|..+.|+|+|++|++|+..+.+++ .||||+|++++ ....+|++.+++ .||+|||+|.|.+... ..|
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-~~~~~T~~~~~t-~nP~WnE~f~f~v~~~-~~L 79 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-SRIGQTATKQKT-NSPAWHDEFVTDVCNG-RKI 79 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-EEEEECCCCSSC-SSCEEEEEEEEEEEEE-CEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-eEeeeeeEECCC-cCCccCCEEEEEecCC-CEE
Confidence 567999999999999986554333 89999999987 445689988876 8999999999999764 799
Q ss_pred EEEEEeCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEEEeee
Q 040360 76 TVQVQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVRSLKV 145 (198)
Q Consensus 76 ~~eV~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f~~ 145 (198)
.|+|||++. ++ +|++||++.|+|.++..+. . .....||.|. ++|+|+|.++ |..
T Consensus 80 ~~~V~d~d~---~~----~dd~iG~~~i~l~~l~~~~--~-~~~~~w~~L~-----~~G~i~l~l~-~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAP---IG----YDDFVANCTIQFEELLQNG--S-RHFEDWIDLE-----PEGKVYVIID-LSG 133 (136)
T ss_dssp EEEEEECCS---SS----SCEEEEEEEEEHHHHTSTT--C-SEEEEEEECB-----SSCEEEEEEE-EEE
T ss_pred EEEEEeCCC---CC----CCCEEEEEEEEHHHhcccC--C-CCccEEEEcC-----CCeEEEEEEE-EEe
Confidence 999999987 66 3899999999999998652 1 1236788874 4899999999 864
No 9
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=1.3e-21 Score=156.50 Aligned_cols=126 Identities=12% Similarity=0.160 Sum_probs=101.7
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeCCCCCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCKSKSSS 87 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~~~~~~ 87 (198)
..+.|+|+|++|++|+.....++.||||+|++++ ++++|++++++ .||+|||+|.|.+.. ...|.|+|||++.
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~kT~v~~~t-lnP~Wne~f~f~v~~-~~~L~~~V~D~d~--- 106 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKKTEKCNNT-NSPKWKQPLTVIVTP-VSKLHFRVWSHQT--- 106 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEECCCCSSC-SSCEEEEEEEEEECT-TCEEEEEEEECCS---
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeEccccCCC-CCCeECCEEEEEeCC-CCEEEEEEEECCC---
Confidence 5688999999999998444445699999999998 88999999976 999999999999965 6899999999987
Q ss_pred CCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCC--CCccEEEEEEEEEeee
Q 040360 88 SGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAK--GDKNGIINVSVRSLKV 145 (198)
Q Consensus 88 ~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~--Gk~~G~I~lsi~~f~~ 145 (198)
+++ |++||++.|+|.++..+.........+|++|...+ .+..|+|+|.+. +..
T Consensus 107 ~~~----dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~-~l~ 161 (173)
T 2nq3_A 107 LKS----DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLD-GLQ 161 (173)
T ss_dssp SSC----CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEE-SEE
T ss_pred CCC----CceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEe-eee
Confidence 663 89999999999999865421111125689988753 347899999998 553
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=1.6e-21 Score=146.14 Aligned_cols=116 Identities=14% Similarity=0.178 Sum_probs=96.3
Q ss_pred ceEEEEEEEEeeCCCC---CCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEec-CCCcEEEEEEEeCC
Q 040360 9 YRTIELTVLSGEDLRI---DRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELP-MHARFITVQVQCKS 83 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~---~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~-~~~~~L~~eV~~~~ 83 (198)
.+.|.|+|++|++|+. .+..++.||||++++++. ..+++|++++++ .||+|||+|.|.+. .....|.|+|||++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND-INPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC-SSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCC-CCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 4899999999999986 244578999999999963 368899999986 99999999999995 44679999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEE
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVR 141 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~ 141 (198)
. .+ |++||++.|+|.++..+. ....||+|.. +..|.|+|++.
T Consensus 81 ~---~~-----~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~---~~~g~i~~~le 122 (126)
T 1rlw_A 81 Y---VM-----DETLGTATFTVSSMKVGE-----KKEVPFIFNQ---VTEMVLEMSLE 122 (126)
T ss_dssp S---SC-----CEEEEEEEEEGGGSCTTC-----EEEEEEEETT---TEEEEEEEEEE
T ss_pred C---CC-----CceeEEEEEEHHHccCCC-----cEEEEEEcCC---CceEEEEEEEE
Confidence 7 55 889999999999997543 3567999963 56777777776
No 11
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.87 E-value=6.8e-22 Score=151.32 Aligned_cols=122 Identities=17% Similarity=0.161 Sum_probs=88.4
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeCCCCC
Q 040360 7 SGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCKSKSS 86 (198)
Q Consensus 7 m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~~~~~ 86 (198)
|+.+.|.|+|++|++|.. .++.||||+|+ . +..+|+++++.+.||+|||+|.|.+......|.|+|||++.
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d~-- 72 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK--V--QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKGL-- 72 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE--E--TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECCS--
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE--e--cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECCC--
Confidence 677899999999999852 57899999999 3 34466666544599999999999998766789999999874
Q ss_pred CCCCCCCCCceeEEEEEeCccccCCCC-CCCceEeEEEEeeCCCCCccEE-------EEEEEEEee
Q 040360 87 SSGNNNNHNKIVGFARIPVSDFIGGYA-PENYLHFLSYRLRNAKGDKNGI-------INVSVRSLK 144 (198)
Q Consensus 87 ~~g~~~~~d~~IG~a~IpL~~l~~~~~-~~~~~~~~sy~L~~~~Gk~~G~-------I~lsi~~f~ 144 (198)
.. |++||++.|||.++..... ....+..++|++.+++|+..|+ +.+++| |.
T Consensus 73 -~~-----dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~-~~ 131 (131)
T 2cjt_A 73 -IW-----DTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAH-FE 131 (131)
T ss_dssp -SC-----EEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEE-EC
T ss_pred -CC-----CCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEE-eC
Confidence 44 9999999999999875431 1124566788887777777666 888888 73
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.87 E-value=2.7e-21 Score=146.57 Aligned_cols=124 Identities=20% Similarity=0.222 Sum_probs=98.4
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeCCCCCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCKSKSSS 87 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~~~~~~ 87 (198)
+...|+|+|++|++|+..+..++.||||++++++..++++|++++++ .||+|||+|.|.+.... .|.|+|||++.
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~-~l~~~v~d~d~--- 77 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNT-LDPKWNQHYDLYVGKTD-SITISVWNHKK--- 77 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSC-SSCEEEEEEEEEEETTC-CEEEEEEEGGG---
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCC-CCCCccCEEEEEeCCCC-EEEEEEEECCC---
Confidence 45789999999999988788889999999999864478899999876 99999999999997653 59999999987
Q ss_pred CCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCC----CccEEEEEEEE
Q 040360 88 SGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKG----DKNGIINVSVR 141 (198)
Q Consensus 88 ~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~G----k~~G~I~lsi~ 141 (198)
+++ +..|++||.+.|+|.++...... ...+|+|....+ +..|+|+|++.
T Consensus 78 ~~~-~~~d~~lG~~~i~l~~l~~~~~~----~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 78 IHK-KQGAGFLGCVRLLSNAISRLKDT----GYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTS-STTTTEEEEEEECHHHHHHHTTS----CCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCC-CCCCCceEEEEEeHHHhhccccc----CcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 552 11268999999999988443211 125678876422 35899999987
No 13
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.84 E-value=5.4e-20 Score=146.61 Aligned_cols=124 Identities=19% Similarity=0.186 Sum_probs=97.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEEeCCCCCCC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQCKSKSSSS 88 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~~~~~~~~~ 88 (198)
.+.|.|+|++|++|. ..+++||||+|+ . +..+|+++++.+.||+|||+|.|.+......|.|+|||++. .
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d~---~ 82 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--V--QNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKGL---I 82 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--E--TTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECCS---S
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--e--cceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECCC---C
Confidence 468999999999884 357899999999 3 34567776644599999999999998767789999999874 4
Q ss_pred CCCCCCCceeEEEEEeCccccCCCCCCC--ceEeEEEEeeCCCCCccE-------EEEEEEEEeeeCCcc
Q 040360 89 GNNNNHNKIVGFARIPVSDFIGGYAPEN--YLHFLSYRLRNAKGDKNG-------IINVSVRSLKVAADQ 149 (198)
Q Consensus 89 g~~~~~d~~IG~a~IpL~~l~~~~~~~~--~~~~~sy~L~~~~Gk~~G-------~I~lsi~~f~~~~~~ 149 (198)
. |++||++.|||.++.... .+. .+..++|++.+++|+..| .|++.++ |..+.+.
T Consensus 83 ~-----dd~iG~~~i~L~~l~~~~-~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~-~e~~~~~ 145 (167)
T 2cjs_A 83 W-----DTMVGTVWIPLRTIRQSN-EEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAH-FELPLDI 145 (167)
T ss_dssp C-----CEEEEEEEEEGGGSCBCS-SCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEE-EECCCCC
T ss_pred C-----CceEEEEEEEHHHhcccC-cCCcccceeeeeeeEcCCCCCCceEccccceEEEEEE-eecCCCC
Confidence 4 999999999999987543 122 466778888777776554 4888999 8877654
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.82 E-value=3e-19 Score=136.31 Aligned_cols=106 Identities=20% Similarity=0.195 Sum_probs=88.2
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEE-ecC---CCcEEEEEEE
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIE-LPM---HARFITVQVQ 80 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~-v~~---~~~~L~~eV~ 80 (198)
..+.|.|+|++|++|+. +..+..||||+|++.++ ..+++|++.+++ .||+|||+|.|. ++. ....|.|+||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKT-RNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSC-SSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCC-CCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 34789999999999986 66788999999999432 367899999986 999999999999 764 3479999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
|++. ++ ++++||++.|+|.++..+. ....||+|..
T Consensus 96 d~d~---~~----~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~ 130 (134)
T 2b3r_A 96 SAES---LR----ENFFLGGITLPLKDFNLSK-----ETVKWYQLTA 130 (134)
T ss_dssp ECCS---SS----CCEEEEEEEEEGGGSCTTS-----CEEEEEECBC
T ss_pred ECCC---CC----CCcEEEEEEEEhhhccCCC-----CcceeEECCC
Confidence 9987 66 3899999999999997643 2467999975
No 15
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=3e-19 Score=138.00 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=89.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC--CcEEEEEEEeCC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH--ARFITVQVQCKS 83 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~--~~~L~~eV~~~~ 83 (198)
.+.|.|+|++|++|+..+..++.||||+|++.++ ..+++|++++++ .||+|||+|.|.+... ...|.|+|||++
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCS-LNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSC-SSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCC-CCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 4789999999999988777889999999999852 367899999985 9999999999999753 368999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
. ++ +|++||++.|+|.++..+. ...||+|..
T Consensus 109 ~---~~----~~~~iG~~~i~l~~l~~~~------~~~W~~L~~ 139 (149)
T 1a25_A 109 L---TS----RNDFMGSLSFGISELQKAG------VDGWFKLLS 139 (149)
T ss_dssp S---SS----CCEEEEEEEEEHHHHTTCC------EEEEEECBC
T ss_pred C---CC----CCCEEEEEEEEHHHhCcCc------cCCeEEccC
Confidence 7 66 3899999999999997642 357999976
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3.9e-19 Score=136.00 Aligned_cols=108 Identities=19% Similarity=0.242 Sum_probs=90.3
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEe-cC---CCcEEEEEEEeC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIEL-PM---HARFITVQVQCK 82 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v-~~---~~~~L~~eV~~~ 82 (198)
..+.|+|+|++|++|+..+..++.||||+|++.++ ..+++|++++++ .||+|||+|.|.+ +. ....|.|+|||+
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKN-LNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTC-SSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCC-CCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 45789999999999998777889999999999642 368899999875 9999999999985 32 247899999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA 128 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~ 128 (198)
+. ++ +|++||++.|+|.++..+. ....||+|...
T Consensus 103 d~---~~----~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 136 (141)
T 2d8k_A 103 DR---FS----RNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPS 136 (141)
T ss_dssp CS---SS----SCEEEEEEEEETTTSCTTS-----CEEEEECCEEC
T ss_pred CC---CC----CCcEEEEEEEEhhhhcCCC-----CccEEEECcCC
Confidence 87 66 3899999999999997653 24679999864
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=5.1e-19 Score=137.27 Aligned_cols=108 Identities=15% Similarity=0.160 Sum_probs=90.7
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEecC---CCcEEEEEEEeCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELPM---HARFITVQVQCKS 83 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~~---~~~~L~~eV~~~~ 83 (198)
..+.|.|+|++|++|+..+..+..||||+|++.++ .++++|++++++ .||+|||+|.|.++. ....|.|+|||++
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT-LNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTC-SSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCC-CCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 45789999999999988777889999999999642 367899999986 999999999999864 2578999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCC
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA 128 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~ 128 (198)
. ++ +|++||++.|+|.++..+. ....||+|...
T Consensus 119 ~---~~----~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 119 R---FS----KHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp S---SS----CCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred C---CC----CCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 7 66 3899999999999996543 24579999753
No 18
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.81 E-value=3.2e-19 Score=135.15 Aligned_cols=106 Identities=19% Similarity=0.180 Sum_probs=89.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC--CcEEEEEEEeCC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH--ARFITVQVQCKS 83 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~--~~~L~~eV~~~~ 83 (198)
.+.|.|+|++|++|+..+..++.||||++++.++ ..+++|++++++ .||.|||+|.|.+... ...|.|+|||++
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t-~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRST-LNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSC-SSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCC-CCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 4789999999999998777889999999999531 367899999987 9999999999998653 358999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCC
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA 128 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~ 128 (198)
. ++ +|++||++.|+|.++..+. ...||+|.+.
T Consensus 94 ~---~~----~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~ 125 (137)
T 3rdl_A 94 R---TT----RNDFMGSLSFGVSELMKMP------ASGWYKLLNQ 125 (137)
T ss_dssp S---SS----CCEEEEEEEEEHHHHHHSC------EEEEEECBCH
T ss_pred C---CC----CCceEEEEEEeHHHhccCc------cCceEECcCc
Confidence 7 66 3899999999999997643 3579999863
No 19
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=2.5e-19 Score=137.20 Aligned_cols=107 Identities=14% Similarity=0.157 Sum_probs=89.7
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCKS 83 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~~ 83 (198)
..+.|.|+|++|++|+..+..++.||||+|.+.++ .++++|++++++ .||+|||+|.|.++.. ...|.|+|||++
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT-LNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSC-SSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCC-CCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 45789999999999988777788999999999542 368899999987 9999999999998643 379999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
. ++ +|++||++.|+|.++..+. ....||+|..
T Consensus 111 ~---~~----~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 111 R---FS----KHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp S---SS----CCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred C---CC----CCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 7 66 3899999999999997653 2457999863
No 20
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=6.6e-19 Score=134.27 Aligned_cols=108 Identities=10% Similarity=0.155 Sum_probs=88.6
Q ss_pred cceEEEEEEEEeeCCCCCCCC-CcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEE-ecCC---CcEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDRRL-IKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIE-LPMH---ARFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~-~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~-v~~~---~~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+.. ++.||||+|++.++ .++++|++++++ .||+|||+|.|. ++.. ...|.|+|||
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKT-LDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSC-SSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCC-CCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 357899999999999877765 88999999999752 378899999976 999999999996 7652 4689999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
++. ++ +|++||++.|+|.++..+. . ....|+.|..
T Consensus 99 ~d~---~~----~~~~lG~~~i~l~~l~~~~--~--~~~~~~~l~~ 133 (138)
T 1ugk_A 99 FDR---FS----RDDIIGEVLIPLSGIELSE--G--KMLMNREIIS 133 (138)
T ss_dssp ECS---SC----CCCCCEEEEEECTTCCCTT--C--CEEEEEECBS
T ss_pred CCC---CC----CCcEEEEEEEehhHccCCC--C--cchhhhhhhc
Confidence 987 66 3899999999999997653 1 1346788875
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=1.7e-19 Score=137.25 Aligned_cols=114 Identities=15% Similarity=0.222 Sum_probs=91.0
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEe-cC---CCcEEEEEEEe
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIEL-PM---HARFITVQVQC 81 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v-~~---~~~~L~~eV~~ 81 (198)
.+.|.|+|++|++|+..+..++.||||+|++.++ ..+++|++++++ .||+|||+|.|.+ +. ....|.|+|||
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t-~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKT-LEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSC-SSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCC-CCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 4789999999999988777889999999999431 367899999986 9999999999994 43 24799999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCC-CCCccE
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA-KGDKNG 134 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~-~Gk~~G 134 (198)
++. +++ +++++||++.|+|.++.... ...||+|... +|+..|
T Consensus 99 ~d~---~~~--~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~g~~sg 141 (141)
T 1v27_A 99 QAR---VRE--EESEFLGEILIELETALLDD------EPHWYKLQTHDSGPSSG 141 (141)
T ss_dssp BCS---SSS--CCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSSCCCCC
T ss_pred CCC---CcC--CCCceEEEEEEEccccCCCC------CCceEECcccccCCCCC
Confidence 987 541 12889999999999986532 4579999874 344443
No 22
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=2.3e-19 Score=137.29 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=91.1
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+..+ .||||+|++.++ ..+++|++++++ .||+|||+|.|.++.. ...|.|+|||
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKT-LNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSC-SSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCC-CCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 3578999999999998877777 999999999642 267899999986 9999999999998652 3589999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccE
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNG 134 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G 134 (198)
++. ++. .+|++||.+.|+|.++..+.. ...||+|....++..|
T Consensus 100 ~d~---~~~--~~~~~iG~~~i~l~~~~~~~~-----~~~W~~L~~~~~~~~G 142 (142)
T 2dmg_A 100 SGG---FLS--KDKGLLGKVLVALASEELAKG-----WTQWYDLTEDSGPSSG 142 (142)
T ss_dssp CCC---SSC--CSCCCCEEEEEECCCSTTTTC-----BCCBCCCBCSCSCCCC
T ss_pred CCC---ccc--cCCcEEEEEEEeccccccccc-----ccceeeccCCCCCCCC
Confidence 986 541 015799999999999875431 3469999876555444
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=5.5e-19 Score=132.73 Aligned_cols=106 Identities=14% Similarity=0.182 Sum_probs=83.5
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEe-cC---CCcEEEEEEE
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIEL-PM---HARFITVQVQ 80 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v-~~---~~~~L~~eV~ 80 (198)
..+.|.|+|++|++|+..+..++.||||++++.++ ..+++|++++++ .||+|||+|.|.+ +. ....|.|+||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKT-LEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSB-SSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCC-CCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 34789999999999998787889999999999431 378899999986 9999999999995 32 2469999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEe
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRL 125 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L 125 (198)
|++. +++ .++++||++.|+|.++.... ...||+|
T Consensus 95 d~d~---~~~--~~~~~lG~~~i~l~~l~~~~------~~~W~~L 128 (129)
T 2bwq_A 95 DQAR---VRE--EESEFLGEILIELETALLDD------EPHWYKL 128 (129)
T ss_dssp EC------------CEEEEEEEEEGGGCCCSS------CEEEEEC
T ss_pred ECCc---CcC--cCCceeEEEEEEccccCCCc------CCccEEC
Confidence 9987 541 01889999999999987542 3469987
No 24
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=1.1e-19 Score=138.88 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=89.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCC------------cEEEeeeecCCCCCCeeeeEEEEE-ecC---CC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSF------------DYCTTKVDESGGSHPSWNEKLVIE-LPM---HA 72 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~------------~~~~T~v~~~~g~nP~WNE~f~f~-v~~---~~ 72 (198)
.+.|.|+|++|++|+..+..++.||||+|++.+.. .+++|++++++ .||+|||+|.|. ++. ..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~~v~~~~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKS-LNPEWNQTVIYKSISMEQLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHH-HSCEEEEEEEECSCCHHHHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCC-CCCCCCCEEEECCcCHHHccC
Confidence 46899999999999987778899999999998731 24789998875 999999999997 653 35
Q ss_pred cEEEEEEEeCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCC
Q 040360 73 RFITVQVQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAK 129 (198)
Q Consensus 73 ~~L~~eV~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~ 129 (198)
..|.|+|||++. +++ |++||.+.|+|.++..+.. ...||+|...+
T Consensus 96 ~~l~i~V~d~d~---~~~----~~~lG~~~i~l~~l~~~~~-----~~~W~~L~~~~ 140 (142)
T 1rh8_A 96 KTLEVTVWDYDR---FSS----NDFLGEVLIDLSSTSHLDN-----TPRWYPLKEQT 140 (142)
T ss_dssp CEEEEEEEEECS---SSC----EEEEEEEEEETTSCGGGTT-----CCEEEECBCCC
T ss_pred CEEEEEEEECCC---CCC----CceEEEEEEeccccccCCC-----CCeEEECCccC
Confidence 799999999987 663 8999999999999976432 24799998644
No 25
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.79 E-value=2.4e-19 Score=139.40 Aligned_cols=119 Identities=12% Similarity=0.137 Sum_probs=92.2
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecC--CCcEEEEEEEeC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPM--HARFITVQVQCK 82 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~--~~~~L~~eV~~~ 82 (198)
..+.|.|+|++|++|+..+ .+..||||+|.+.++ ..+++|++++++ .||+|||+|.|.++. ....|.|+|||+
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 102 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDC-RDPAFHEHFFFPVQEEDDQKRLLVTVWNR 102 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTC-SSCEEEEEEEEECCGGGTTSEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCC-CCCccccEEEEecccHHhCCEEEEEEEeC
Confidence 4588999999999998766 588999999999542 367899999986 999999999999943 335699999998
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEE
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINV 138 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~l 138 (198)
+. +++ +|++||++.|+|.++.... .....||.|........+.+.+
T Consensus 103 d~---~~~---~d~~lG~~~i~l~~l~~~~----~~~~~W~~L~~~~~g~~~~lkv 148 (153)
T 3fbk_A 103 AS---QSR---QSGLIGCMSFGVKSLLTPD----KEISGWYYLLGEHLGRTKHLKV 148 (153)
T ss_dssp CS---SGG---GCEEEEEEEEEHHHHTC------CCEEEEEECBCTTGGGTCCCBC
T ss_pred CC---CCC---CCcEEEEEEEEHHHhcCCC----CccccEEECCChhhccccccee
Confidence 87 541 2799999999999997421 1245799998765434444443
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.79 E-value=6e-19 Score=139.97 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=90.3
Q ss_pred ceEEEEEEEEeeCCCCCCC-CCcCCcEEEEEECCCC---cEEEeeeecCCCCCCeeeeEEEEEecCCCcEEEEEEE-eCC
Q 040360 9 YRTIELTVLSGEDLRIDRR-LIKKNAFAIVQTDTSF---DYCTTKVDESGGSHPSWNEKLVIELPMHARFITVQVQ-CKS 83 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~-~~~~dpYvvv~~~~~~---~~~~T~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV~-~~~ 83 (198)
.+.|.|+|++|++|+..+. .+..||||+|.+.++. .+++|++++++ .||+|||+|.|.+......|.|+|| |++
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKT-LDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSC-SSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCC-CCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 4789999999999987664 6889999999998632 37899999986 9999999999999877789999999 888
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCC
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAK 129 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~ 129 (198)
. ++ +|++||.+.|+|.++..+. ....||+|...+
T Consensus 108 ~---~~----~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 108 R---MD----HKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp T---TC----SSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred C---CC----CCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 7 66 3899999999999997543 246799998754
No 27
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=137.49 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=89.7
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEe
Q 040360 9 YRTIELTVLSGEDLRIDR-RLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQC 81 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~-~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~ 81 (198)
.+.|.|+|++|++|+..+ ..++.||||++.+.++ ..+++|++.+++ .||+|||+|.|.++.. ...|.|+|||
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDT-VNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSC-SSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCC-CCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 478999999999998655 5688999999999853 248899999986 9999999999999763 4579999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCC
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAK 129 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~ 129 (198)
++. ++ +|++||++.|+|.++..+.. ...||+|..+.
T Consensus 101 ~d~---~~----~~~~iG~~~i~l~~l~~~~~-----~~~W~~L~~~~ 136 (148)
T 3fdw_A 101 HGR---FG----RNTFLGEAEIQMDSWKLDKK-----LDHCLPLHGKI 136 (148)
T ss_dssp ECG---GG----CEEEEEEEEEEHHHHHHHCC-----SEEEEECBCC-
T ss_pred CCC---Cc----CCcEEEEEEEEcccccccCC-----ccceEECcCcc
Confidence 987 66 38999999999999976531 34799998754
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.79 E-value=1.1e-18 Score=133.51 Aligned_cols=107 Identities=16% Similarity=0.235 Sum_probs=89.1
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEE-ecCC---CcEEEEEEE
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIE-LPMH---ARFITVQVQ 80 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~-v~~~---~~~L~~eV~ 80 (198)
..+.|.|+|++|++|+..+..++.||||+|++.++ ..+++|++++++ .||+|||+|.|. ++.. ...|.|+||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNT-RNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSC-SSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCC-CCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 45789999999999998777889999999999752 368899999975 999999999999 6542 368999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
|++. ++ +|++||++.|+|.++..+. .+..|+.|..
T Consensus 106 d~d~---~~----~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDK---FG----HNEFIGETRFSLKKLKANQ-----RKNFNICLER 140 (142)
T ss_dssp EECT---TS----CEEEEEEEEEEGGGCCTTC-----CEEEEEECBC
T ss_pred ECCC---CC----CCcEEEEEEEEHHHcCCCC-----ccEEEEeccc
Confidence 9987 66 3899999999999997653 2456777764
No 29
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=3.1e-18 Score=144.57 Aligned_cols=124 Identities=17% Similarity=0.178 Sum_probs=102.8
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCKS 83 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~~ 83 (198)
..+.|.|+|++|++|...+..++.||||+|.+.+. .++++|++++++ .||.|||+|.|.++.. ...|.|+|||++
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~-~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT-LNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSC-SSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCC-CCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 45799999999999988777789999999999753 357899999986 9999999999998652 479999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCC---CccEEEEEEEEEeee
Q 040360 84 KSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKG---DKNGIINVSVRSLKV 145 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~G---k~~G~I~lsi~~f~~ 145 (198)
. ++ +|++||++.|+|.++..+. ....||+|....+ ...|.|+++++ +.+
T Consensus 96 ~---~~----~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~-~~p 147 (284)
T 2r83_A 96 R---FS----KHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLR-YVP 147 (284)
T ss_dssp S---SS----CCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEE-EET
T ss_pred C---CC----CCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEE-ecC
Confidence 7 66 3899999999999997643 2457999987543 36799999888 654
No 30
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=4.5e-19 Score=139.31 Aligned_cols=106 Identities=12% Similarity=0.085 Sum_probs=88.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC----CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEe
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS----FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQC 81 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~----~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~ 81 (198)
.+.|.|+|++|++|...+..++.||||++++.+. ..+++|++++++ .||+|||+|.|.++.. ...|.|+|||
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~t-lnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDAS-DTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECC-SSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCC-CCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4789999999999988788889999999999762 237899999987 9999999999998753 4689999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEee
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLR 126 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~ 126 (198)
++. ++ ++++||++.|+|.++.... .....||+|.
T Consensus 121 ~d~---~~----~~d~iG~~~i~l~~l~~~~----~~~~~W~~L~ 154 (155)
T 2z0u_A 121 TDR---SH----LEECLGGAQISLAEVCRSG----ERSTRWYNLL 154 (155)
T ss_dssp ECT---TS----CEEEEEEEEEECTTSCTTC----CCEEEEEEEB
T ss_pred CCC---CC----CCcEEEEEEEEHHHccCCC----CccccceEcc
Confidence 987 66 3999999999999995321 1246799985
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.78 E-value=1.2e-18 Score=132.01 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=81.0
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCCC---cEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMHA---RFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~~---~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+..++.||||++++.++ ..+++|++++++ .||+|||+|.|.++... ..|.|+|||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t-~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRN-LNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSC-SSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCC-CCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 35789999999999998777889999999999862 247889999987 99999999999997643 689999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCcccc
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFI 109 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~ 109 (198)
++. ++ +|++||++.|+|.++.
T Consensus 93 ~~~---~~----~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 93 KDK---LS----RNDVIGKIYLSWKSGP 113 (138)
T ss_dssp CCS---SS----CCEEEEEEEESSSSCH
T ss_pred CCC---CC----CCcEEEEEEEccccCC
Confidence 987 66 3899999999999754
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=5.4e-19 Score=136.11 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=86.1
Q ss_pred cceEEEEEEEEeeCCCCC-C------CCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEE
Q 040360 8 GYRTIELTVLSGEDLRID-R------RLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFIT 76 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~-~------~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~ 76 (198)
..+.|.|+|++|++|+.. + ..++.||||+|++.++ ..+++|++.+++ .||+|||+|.|.++.. ...|.
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKT-QKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSC-SSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCC-CCCeEeeeEEEEeChHHhccCEEE
Confidence 357899999999999863 2 2458999999999753 357899999886 9999999999998752 35899
Q ss_pred EEEEeCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 77 VQVQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 77 ~eV~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
|+|||++. ++ ++++||++.|+|.++..+.. ...||.|..
T Consensus 103 ~~V~d~d~---~~----~~~~iG~~~i~l~~l~~~~~-----~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDK---FS----RHCVIGKVSVPLCEVDLVKG-----GHWWKALIP 141 (147)
T ss_dssp EEEECCST---TC----CSCCCEEEEEETTTSCTTTC-----CCEEECCBC
T ss_pred EEEEECCC---Cc----CCcEEEEEEEechhcCCCCC-----ccEEEEeec
Confidence 99999987 66 38899999999999965431 246888874
No 33
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.78 E-value=3.3e-18 Score=133.22 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=97.8
Q ss_pred eEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecC---CCcEEEEEEEeCCCCC
Q 040360 10 RTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPM---HARFITVQVQCKSKSS 86 (198)
Q Consensus 10 ~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~---~~~~L~~eV~~~~~~~ 86 (198)
..|.|+|.+|.+|+ ++.|||+.+.+-+ .+++|+++++++.||+|||.|.|++.. ..+.|.|+|++++.
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg--~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~-- 91 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRG--QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK-- 91 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETT--EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT--
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEec--cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc--
Confidence 46999999999998 5899999999977 899999998545999999999999963 35799999999988
Q ss_pred CCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCcc-EEEEEEEEEeee
Q 040360 87 SSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKN-GIINVSVRSLKV 145 (198)
Q Consensus 87 ~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~-G~I~lsi~~f~~ 145 (198)
+++ |++||++.|+|+++.... . -.++-.|.+.++++- +.|.|+++ +.+
T Consensus 92 -v~~----nrlIG~~~i~Lq~lv~~~----~-l~l~~~LvD~n~~~~~a~I~l~l~-Y~p 140 (144)
T 3l9b_A 92 -VFS----NKLIGTFRMVLQKVVEEN----R-VEVSDTLIDDNNAIIKTSLSMEVR-YQA 140 (144)
T ss_dssp -TSC----CEEEEEEEEESHHHHHHS----E-EEEEEEEECTTSCEEEEEEEEEEE-EEE
T ss_pred -ccC----CCEEEEEEEEhHHhccCC----e-EEEeecccCCCCCccccEEEEEEE-ecC
Confidence 663 999999999999998764 1 235778999888864 68888888 543
No 34
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.77 E-value=4.6e-18 Score=133.66 Aligned_cols=94 Identities=11% Similarity=0.097 Sum_probs=81.5
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+..++.||||+|++.+. ..+++|++++++ .||+|||+|.|.+... ...|.|+|||
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 113 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKT-LNPEFNEEFFYDIKHSDLAKKSLDISVWD 113 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSC-SSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCC-CCCcccceEEEEcchHhcCCCEEEEEEEE
Confidence 35789999999999988777889999999999863 268899999886 9999999999999752 4699999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCcccc
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFI 109 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~ 109 (198)
++. +++ +++||.+.|+|.++.
T Consensus 114 ~d~---~~~----~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 114 YDI---GKS----NDYIGGCQLGISAKG 134 (166)
T ss_dssp CCS---SSC----CEEEEEEEEETTCCH
T ss_pred CCC---CCC----CcEEEeEEEecccCC
Confidence 987 663 899999999999864
No 35
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.77 E-value=4.7e-18 Score=132.58 Aligned_cols=109 Identities=15% Similarity=0.177 Sum_probs=88.4
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+..+..||||+|++.++ ..+++|++++++ .||+|||+|.|.++.. ...|.|+|||
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT-LNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC-SSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCC-CCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 45799999999999998777889999999999752 146899999886 9999999999999753 4689999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccc----------cCCCCCCCceEeEEEEeeC
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDF----------IGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l----------~~~~~~~~~~~~~sy~L~~ 127 (198)
++. ++ +|++||.+.|+|.++ ... + +.....||.|..
T Consensus 102 ~d~---~~----~~~~iG~~~i~l~~~~~~~~~w~~l~~~--~-~~~~~~W~~L~~ 147 (159)
T 1tjx_A 102 YDK---IG----KNDAIGKVFVGYNSTGAELRHWSDMLAN--P-RRPIAQWHTLQV 147 (159)
T ss_dssp CCS---SS----CCEEEEEEEEETTCCHHHHHHHHHHHHS--T-TCCEEEEEECBC
T ss_pred CCC---CC----CCceEEEEEECCCCCCcHHHHHHHHHHC--C-CCeeeeEEECcC
Confidence 987 66 389999999999954 222 1 223567999875
No 36
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=4.8e-18 Score=130.07 Aligned_cols=105 Identities=12% Similarity=0.091 Sum_probs=85.5
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC--CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS--FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCK 82 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~--~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~ 82 (198)
..+.|.|+|++|++ .+..++.||||+|.+.++ ..+++|++++++ .||+|||+|.|.++.. ...|.|+|||+
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~t-lnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQ-LHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCC-SSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCC-CCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 35789999999994 355678999999999541 246899999986 9999999999999753 46899999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA 128 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~ 128 (198)
+. ++ +|++||++.|+|.++..+. ....||.|...
T Consensus 100 d~---~~----~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 133 (138)
T 1wfm_A 100 DR---FS----RHSVAGELRLGLDGTSVPL-----GAAQWGELKTS 133 (138)
T ss_dssp CS---SC----TTSCSEEEEEESSSSSSCT-----TCCEEEECCCC
T ss_pred CC---CC----CCcEEEEEEEEcccccCcc-----cccceeeCcCC
Confidence 87 66 3899999999999996432 13479999864
No 37
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.76 E-value=6.4e-18 Score=130.87 Aligned_cols=92 Identities=15% Similarity=0.188 Sum_probs=74.2
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-C--cEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-F--DYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-~--~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+..++.||||+|.+.++ . .+++|++++++ .||+|||+|.|.++.. ...|.|+|||
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~l~v~V~d 106 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCT-PNAVFNELFVFDIPCESLEEISVEFLVLD 106 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSC-SSEEEEEEEEEECCSSSSTTEEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCC-CCCeecceEEEECCHHHhCceEEEEEEEe
Confidence 35789999999999988777788999999999542 1 26799999985 9999999999999764 3689999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCcc
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSD 107 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~ 107 (198)
++. +++ |++||++.|+|.+
T Consensus 107 ~d~---~~~----~~~lG~~~i~l~~ 125 (153)
T 1w15_A 107 SER---GSR----NEVIGRLVLGATA 125 (153)
T ss_dssp CCT---TSC----CEEEEEEEESTTC
T ss_pred CCC---CCC----CcEEEEEEECCCC
Confidence 987 663 8999999999998
No 38
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.74 E-value=5.8e-17 Score=152.41 Aligned_cols=121 Identities=19% Similarity=0.320 Sum_probs=101.3
Q ss_pred cceEEEEEEEEeeCCCCCC--CCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC-CcEEEEEEEe
Q 040360 8 GYRTIELTVLSGEDLRIDR--RLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH-ARFITVQVQC 81 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~--~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~-~~~L~~eV~~ 81 (198)
..+.|.|+|++|++|+..+ ..+..||||+|++.+. ..+++|++++++|.||+|||+|.|.+... ...|.|+|+|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 4578999999999998655 3578999999999551 35789999999889999999999999764 3689999999
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCc--cEEEEEEEEEee
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDK--NGIINVSVRSLK 144 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~--~G~I~lsi~~f~ 144 (198)
++. ++ +|++||++.|||.+|..|+ .+++|++..|++ .+.|.|.+. |.
T Consensus 575 ~D~---~~----~dd~iG~~~ipl~~L~~G~--------r~v~L~d~~g~~~~~~~L~v~i~-~~ 623 (624)
T 1djx_A 575 YDS---SS----KNDFIGQSTIPWNSLKQGY--------RHVHLLSKNGDQHPSATLFVKIS-IQ 623 (624)
T ss_dssp CCS---SS----CCEEEEEEEEEGGGBCCEE--------EEEEEECTTSCEEEEEEEEEEEE-EE
T ss_pred cCC---CC----CCceeEEEEEEHHHcCCCc--------EEEeCCCCCcCCCCceEEEEEEE-EE
Confidence 987 65 3999999999999997653 589999998885 577888777 64
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.73 E-value=1.8e-17 Score=150.40 Aligned_cols=122 Identities=15% Similarity=0.197 Sum_probs=100.2
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCC-CcEEEEEEEeCCCCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMH-ARFITVQVQCKSKSS 86 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~-~~~L~~eV~~~~~~~ 86 (198)
..+.|.|+|++|++|+..+..++.||||+|.+++ ++++|++++++ .||.|||+|.|.+... ...|.|+|||++.
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~--~~~~T~~~~~t-~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-- 459 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGS--QSYTTRTIQDT-LNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-- 459 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT--EEEECCCCSSC-SSCEEEEEEEEEESCTTTCEEEEEEEECCS--
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECC--eeccCCccCCC-CCCccCceEEEEecCCCCCEEEEEEEeCCC--
Confidence 4578999999999998888889999999999987 88999999987 9999999999999653 4689999999987
Q ss_pred CCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEEEee
Q 040360 87 SSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVRSLK 144 (198)
Q Consensus 87 ~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f~ 144 (198)
++ +|++||.+.|+|.++..+..... ....|+.|. ++..|+|+|.+. +.
T Consensus 460 -~~----~~d~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~---~~~~G~i~l~~~-l~ 507 (510)
T 3jzy_A 460 -FS----PDDFLGRTEIPVAKIRTEQESKG-PMTRRLLLH---EVPTGEVWVRFD-LQ 507 (510)
T ss_dssp -SS----SCCEEEEEEEEHHHHHHHHHHHC-SCCEEEECB---SSSSCEEEEEEE-EE
T ss_pred -CC----CCCceEEEEEEHHHhccccCCCC-ceeeeecCC---CCCCceEEEEEE-EE
Confidence 66 38999999999999986531111 123578875 457899888877 53
No 40
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.73 E-value=5.4e-17 Score=138.58 Aligned_cols=125 Identities=14% Similarity=0.151 Sum_probs=97.6
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeCC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCKS 83 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~~ 83 (198)
..+.|.|+|++|++|+..+..++.||||+|.+.++ .++++|++++++ .||+|||+|.|.++.. ...|.|+|||++
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKT-LNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSC-SSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCC-CCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 35789999999999998777889999999999532 478899999886 9999999999998643 358999999998
Q ss_pred CCCCCCCCCCCCceeEEEEEe-CccccCCCCCCCceEeEEEEeeCCCC--CccEEEEEEEEEeee
Q 040360 84 KSSSSGNNNNHNKIVGFARIP-VSDFIGGYAPENYLHFLSYRLRNAKG--DKNGIINVSVRSLKV 145 (198)
Q Consensus 84 ~~~~~g~~~~~d~~IG~a~Ip-L~~l~~~~~~~~~~~~~sy~L~~~~G--k~~G~I~lsi~~f~~ 145 (198)
. ++ +|++||++.|+ |.++...... ...|+.|....+ ...|.|++++. +.+
T Consensus 97 ~---~~----~~~~iG~~~i~~l~~~~~~~~~----~~~w~~L~~~~~~~~~~G~i~vsl~-y~~ 149 (296)
T 1dqv_A 97 R---FS----RHDLIGQVVLDNLLELAEQPPD----RPLWRDILEGGSEKADLGELNFSLC-YLP 149 (296)
T ss_dssp S---SS----CCCEEEEEECCCTTGGGSSCSS----CCCCEECBCCSSCCSCCCEEEEEEE-EET
T ss_pred C---CC----CCceEEEEEeccccccccCCcc----ceeeeccccccccccccceEEEEEE-ecc
Confidence 7 66 38999999996 5555542211 235888876433 35788888877 543
No 41
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.70 E-value=1.7e-16 Score=146.99 Aligned_cols=113 Identities=18% Similarity=0.203 Sum_probs=94.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEec--CCCcEEEEEEEeCCCCC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELP--MHARFITVQVQCKSKSS 86 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~--~~~~~L~~eV~~~~~~~ 86 (198)
.+.|.|+|++|++|+. +.+++.||||+|++++ ++++|++++++ .||+|||+|.|.+. .....|.|+|||++.
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~--~~~kTkvik~t-lNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~-- 466 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG--QEFRTGVVWNN-NNPRWTDKMDFENVLLSTGGPLRVQVWDADY-- 466 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT--EEEECCCBCSC-SSCBCCCCEEEEEEETTTCCCEEEEEEECCS--
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC--EeeeeeeecCC-CCCCCCeEEEEEEecCCCCCEEEEEEEECCC--
Confidence 4689999999999987 7889999999999998 78999999987 99999999999853 246789999999987
Q ss_pred CCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEEEeeeCCc
Q 040360 87 SSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVRSLKVAAD 148 (198)
Q Consensus 87 ~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f~~~~~ 148 (198)
.+ +|++||++.++|.. |. +..|+.| .+|.|++++. +...++
T Consensus 467 -~~----~dD~LG~~~~~L~~---g~------~~~~~~l------~~G~l~~~~~-~~c~p~ 507 (540)
T 3nsj_A 467 -GW----DDDLLGSCDRSPHS---GF------HEVTCEL------NHGRVKFSYH-AKCLPH 507 (540)
T ss_dssp -SS----CCEEEEEEEECCCS---EE------EEEEEEC------SSSEEEEEEE-EEECTT
T ss_pred -CC----CCCEEEEEEEEeeC---Cc------EEEEEEc------CCeEEEEEEE-EEECCC
Confidence 55 38999999999972 21 3456664 2589999999 888765
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=2.3e-15 Score=126.92 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=88.1
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCK 82 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~ 82 (198)
.+.|.|+|++|++|...+..+..||||+|++.++ ..+++|++.+++ .||+|||+|.|.++.. ...|.|+|||+
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT-LNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC-SSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCC-CCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 4689999999999987777889999999999642 146789998886 9999999999999764 35799999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCC-------CCCCceEeEEEEeeCC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGY-------APENYLHFLSYRLRNA 128 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~-------~~~~~~~~~sy~L~~~ 128 (198)
+. +++ +++||++.|+|..+..+. ...+.....||.|...
T Consensus 228 d~---~~~----~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 228 DK---IGK----NDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CS---SSC----CCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CC---CCC----CcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 87 663 899999999998643210 0112234679998753
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.60 E-value=4.7e-15 Score=141.76 Aligned_cols=106 Identities=14% Similarity=0.164 Sum_probs=89.5
Q ss_pred cceEEEEEEEEeeCCCC---CCCCCcCCcEEEEEECCC-CcEEEeeeecCCCCCCeeeeEEEEEecC-CCcEEEEEEEeC
Q 040360 8 GYRTIELTVLSGEDLRI---DRRLIKKNAFAIVQTDTS-FDYCTTKVDESGGSHPSWNEKLVIELPM-HARFITVQVQCK 82 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~---~~~~~~~dpYvvv~~~~~-~~~~~T~v~~~~g~nP~WNE~f~f~v~~-~~~~L~~eV~~~ 82 (198)
..+.|+|+|++|++|+. .+..++.||||+|++.+. ..+++|++++++ .||+|||+|.|.+.. ....|.|+|||+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~t-lNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND-INPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC-SSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCC-CCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 35799999999999986 556678999999999953 367899999986 999999999999976 457899999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRN 127 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~ 127 (198)
+. ++ |++||++.|+|.++..+.. ...||+|..
T Consensus 95 D~---~~-----ddfIG~v~I~L~~L~~g~~-----~~~w~~L~~ 126 (749)
T 1cjy_A 95 NY---VM-----DETLGTATFTVSSMKVGEK-----KEVPFIFNQ 126 (749)
T ss_dssp CS---SS-----CEEEEEECCBSTTSCTTCC-----CCEEEEETT
T ss_pred CC---CC-----CceeEEEEEEHHHcCCCCc-----eEEEEecCC
Confidence 87 66 8899999999999976542 346888853
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.58 E-value=8.5e-17 Score=146.97 Aligned_cols=122 Identities=15% Similarity=0.235 Sum_probs=19.4
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcEEEeeeecCC--CCCCeeeeEEEEEecCCCcEEEEEEEeC-CC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDYCTTKVDESG--GSHPSWNEKLVIELPMHARFITVQVQCK-SK 84 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~~~T~v~~~~--g~nP~WNE~f~f~v~~~~~~L~~eV~~~-~~ 84 (198)
..+.|+|+|++|++|+..+ ||||++.+++ ....+|++.+++ |.||+|||+|.|.+......|.|+|||+ +.
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~-~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDD-MLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEECC---------------------------------------------------CCEECC------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECC-eEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 3478999999999997543 9999999988 446789988764 5899999999998644457899999994 31
Q ss_pred -CCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCC------------------------CccEEEEEE
Q 040360 85 -SSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKG------------------------DKNGIINVS 139 (198)
Q Consensus 85 -~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~G------------------------k~~G~I~ls 139 (198)
++ .+ +|++||.+.|||.++..+.. ...||+|..+++ +..|.|+|.
T Consensus 83 ~~~-~~----~d~~lG~v~i~l~~l~~~~~-----~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~ 152 (483)
T 3bxj_A 83 KRK-KD----KAGYVGLVTVPVATLAGRHF-----TEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLK 152 (483)
T ss_dssp -----------------------------C-----CEECC--------------------------------------CE
T ss_pred ccc-CC----CCceEEEEEEEHHHhcCCCC-----CCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEE
Confidence 01 23 38999999999999976531 357999965432 246899999
Q ss_pred EEEeeeC
Q 040360 140 VRSLKVA 146 (198)
Q Consensus 140 i~~f~~~ 146 (198)
++ |...
T Consensus 153 v~-~~~~ 158 (483)
T 3bxj_A 153 AR-YQTM 158 (483)
T ss_dssp EE-EEEC
T ss_pred EE-eeee
Confidence 99 8765
No 45
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.53 E-value=9.9e-14 Score=133.73 Aligned_cols=112 Identities=21% Similarity=0.304 Sum_probs=90.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---C--cEEEeeeecCCCCCCeeeeE-EEEE-ecCC-CcEEEEEEE
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---F--DYCTTKVDESGGSHPSWNEK-LVIE-LPMH-ARFITVQVQ 80 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~--~~~~T~v~~~~g~nP~WNE~-f~f~-v~~~-~~~L~~eV~ 80 (198)
.++|.|+|++|++|.. .+.||||+|++.+. . ++++|++++++|.||+|||+ |.|. +... -..|.|+|+
T Consensus 649 ~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD----KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCS----SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCC----CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 4789999999999974 26899999999752 1 56799999887899999998 9998 6543 369999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCcc--EEEEEEEEEee
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKN--GIINVSVRSLK 144 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~--G~I~lsi~~f~ 144 (198)
|+ + +++||++.|||++|..|+ ...+|++..|++- +.|-+.|. +.
T Consensus 725 D~------d-----ddfiG~~~ipL~~L~~Gy--------R~vpL~~~~g~~~~~atLfv~i~-~~ 770 (816)
T 3qr0_A 725 EE------N-----GKFIGHRVMPLDGIKPGY--------RHVPLRNESNRPLGLASVFAHIV-AK 770 (816)
T ss_dssp ET------T-----SCEEEEEEEESTTCCCEE--------EEEEEECTTSCEEEEEEEEEEEE-EE
T ss_pred ec------C-----CCeeeEEEEEHHHcCCcc--------eEEEEeCCCCCCCCceEEEEEEE-EE
Confidence 85 2 679999999999998764 4789999999854 56666655 54
No 46
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.53 E-value=5.7e-15 Score=126.03 Aligned_cols=94 Identities=15% Similarity=0.218 Sum_probs=80.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeC
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCK 82 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~ 82 (198)
.+.|.|+|++|++|+..+..+..||||++++..+ ..+++|++.+++ .||+|||+|.|.++.. ...|.|+|||+
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNT-LNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSC-SSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCC-CCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 4789999999999987777788999999999742 257899999886 9999999999998764 35799999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIG 110 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~ 110 (198)
+. ++ +|++||.+.|+|.++..
T Consensus 230 d~---~~----~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 230 DC---IG----HNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CS---SS----CCEEEEECCCSSCTTCH
T ss_pred CC---CC----CCceEEEEEECCccCCc
Confidence 87 66 39999999999997743
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.51 E-value=1.2e-13 Score=134.09 Aligned_cols=113 Identities=19% Similarity=0.230 Sum_probs=91.1
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC----CcEEEeeeecCCCCCCeeee-EEEEE-ecC-CCcEEEEEEEe
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS----FDYCTTKVDESGGSHPSWNE-KLVIE-LPM-HARFITVQVQC 81 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~----~~~~~T~v~~~~g~nP~WNE-~f~f~-v~~-~~~~L~~eV~~ 81 (198)
..+|.|+|++|++|.. .+.||||+|.+.+. ..+++|++++++|.||+||| +|.|. +.. +...|.|+|+|
T Consensus 724 ~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCcc----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 4589999999999974 26899999999751 13579999988789999999 69998 643 34689999998
Q ss_pred CCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCc--cEEEEEEEEEeee
Q 040360 82 KSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDK--NGIINVSVRSLKV 145 (198)
Q Consensus 82 ~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~--~G~I~lsi~~f~~ 145 (198)
++ +++||++.|||..|..|+ ...+|++..|.. .+.|.+.|. +..
T Consensus 800 ~d-----------ddfiG~~~lpL~~L~~Gy--------R~vpL~~~~g~~l~~atLfv~i~-~~~ 845 (885)
T 3ohm_B 800 EG-----------GKFVGHRILPVSAIRSGY--------HYVCLRNEANQPLCLPALLIYTE-ASD 845 (885)
T ss_dssp TT-----------TEEEEEEEEETTTCCCEE--------EEEEEECTTSCEEEEEEEEEEEE-EEE
T ss_pred CC-----------ccEEeeEEEEHHHcCCCc--------eEEEecCCCCCccCceEEEEEEE-EEe
Confidence 53 679999999999997664 467999998874 677777777 653
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.50 E-value=2.6e-13 Score=130.68 Aligned_cols=112 Identities=22% Similarity=0.307 Sum_probs=89.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECC---C-CcEEEee-eecCCCCCCeeee-EEEE-EecCC-CcEEEEEEE
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDT---S-FDYCTTK-VDESGGSHPSWNE-KLVI-ELPMH-ARFITVQVQ 80 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~---~-~~~~~T~-v~~~~g~nP~WNE-~f~f-~v~~~-~~~L~~eV~ 80 (198)
.++|.|+|++|++|+. .+.||||+|.+.+ + .++++|+ +++++|.||+||| +|.| .+... -..|.|+|+
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 5789999999999974 3689999999953 1 2468999 8887779999999 6999 78543 358999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCC--ccEEEEEEEEEee
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGD--KNGIINVSVRSLK 144 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk--~~G~I~lsi~~f~ 144 (198)
|++ +++||.+.|||.+|..|+ .+++|++..|. ..+.|.+.+. +.
T Consensus 753 D~d-----------~d~iG~~~ipl~~L~~G~--------r~v~L~~~~g~~~~~~~Lfv~i~-~~ 798 (799)
T 2zkm_X 753 EEG-----------NKFLGHRIIPINALNSGY--------HHLCLHSESNMPLTMPALFIFLE-MK 798 (799)
T ss_dssp ETT-----------TEEEEEEEEEGGGBCCEE--------EEEEEECTTCCEEEEEEEEEEEE-EE
T ss_pred EeC-----------CCccceEeeehhhcCCCc--------EEEeccCCCCCCCCceEEEEEEE-EE
Confidence 853 679999999999997653 57899998887 3466666666 53
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.42 E-value=6.5e-13 Score=125.24 Aligned_cols=107 Identities=15% Similarity=0.127 Sum_probs=90.1
Q ss_pred cceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC---CcEEEeeeecCCCCCCeeeeEEEEEecCC--CcEEEEEEEeC
Q 040360 8 GYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS---FDYCTTKVDESGGSHPSWNEKLVIELPMH--ARFITVQVQCK 82 (198)
Q Consensus 8 ~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~---~~~~~T~v~~~~g~nP~WNE~f~f~v~~~--~~~L~~eV~~~ 82 (198)
..+.|.|+|++|++|...+..++.||||++++.++ ..+.+|++++++ .||.|||+|.|.+... ...|.|+|||+
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~t-lnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSS-LNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSC-SSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccc-cCCCccceeeeecccCCccceeeeEEeec
Confidence 45789999999999998888899999999999432 367899999987 9999999999998642 45799999999
Q ss_pred CCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCC
Q 040360 83 SKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNA 128 (198)
Q Consensus 83 ~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~ 128 (198)
+. .+ +|++||++.|+|.++.... ...||.|...
T Consensus 249 d~---~~----~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~ 281 (674)
T 3pfq_A 249 DL---TS----RNDFMGSLSFGISELQKAG------VDGWFKLLSQ 281 (674)
T ss_dssp CS---SS----CCEECCBCCCBTTHHHHCC------EEEEEECBCT
T ss_pred cc---cc----ccccccccccchhhhccCC------cccceeeccc
Confidence 87 66 3999999999999998653 2468998764
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.16 E-value=5.6e-10 Score=84.71 Aligned_cols=120 Identities=14% Similarity=0.083 Sum_probs=86.5
Q ss_pred CCCCcceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcE---EEe-eeecCCCCCCeeeeEEEEEecCCCcEEEEEE
Q 040360 4 KSSSGYRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDY---CTT-KVDESGGSHPSWNEKLVIELPMHARFITVQV 79 (198)
Q Consensus 4 ~~~m~~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~---~~T-~v~~~~g~nP~WNE~f~f~v~~~~~~L~~eV 79 (198)
+|+|+ ..|+|.+.+++.-.........||||.|.++.. .. .+| ...+.+ .+|+|||.|.-.+.. .+.|.|.|
T Consensus 1 ~~~m~-~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~-~~~e~g~t~~~K~kT-~~P~Wne~Fd~~V~~-Gr~l~i~V 76 (126)
T 1yrk_A 1 GSHMA-PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEA-LSTERGKTLVQKKPT-MYPEWKSTFDAHIYE-GRVIQIVL 76 (126)
T ss_dssp CCCCC-CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEE-EEETTEEEEECCSCC-BCCCTTCEEEEECCT-TCEEEEEE
T ss_pred CCCcC-ccEEeeeccccccccCCccccCCceEEEEeeee-EEcccceeecccCCC-CCcCccceEEeeeeC-CEEEEEEE
Confidence 45655 789999988876433222235899999999872 21 244 344444 899999999999876 48999999
Q ss_pred EeCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCCCccEEEEEEEEEe
Q 040360 80 QCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKGDKNGIINVSVRSL 143 (198)
Q Consensus 80 ~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f 143 (198)
|+.. .++|..++|++.+|+..-..++.....|..| ++.|+|++.+++|
T Consensus 77 fh~a-----------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdL-----eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 77 MRAA-----------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDL-----QPQAKVLMSVQYF 124 (126)
T ss_dssp EEET-----------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEEC-----BSSCEEEEEEEEE
T ss_pred EcCC-----------CCeeeEEEEEHHHHHhhhccCCCceEEEEec-----ccCcEEEEEEEEe
Confidence 9632 4799999999999995410011234678887 6799999999944
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.08 E-value=6.1e-10 Score=85.63 Aligned_cols=122 Identities=10% Similarity=0.085 Sum_probs=89.1
Q ss_pred CCCCCcceEEEEEEEEeeCCCCCC-CCCcCCcEEEEEECCC--CcEEEe-eeecCCCCCCeeeeEEEEEecCCCcEEEEE
Q 040360 3 EKSSSGYRTIELTVLSGEDLRIDR-RLIKKNAFAIVQTDTS--FDYCTT-KVDESGGSHPSWNEKLVIELPMHARFITVQ 78 (198)
Q Consensus 3 ~~~~m~~~~LeVtVlsA~~L~~~~-~~~~~dpYvvv~~~~~--~~~~~T-~v~~~~g~nP~WNE~f~f~v~~~~~~L~~e 78 (198)
++|.-+...|+|.+.+++...... .....||||.|.++.. ....+| ...+.+ .+|+|||.|.-.|.. .+.|.|.
T Consensus 3 ~~~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT-~~P~Wne~Fd~~V~~-Gr~l~i~ 80 (138)
T 2enj_A 3 SGSSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPT-MYPPWDSTFDAHINK-GRVMQII 80 (138)
T ss_dssp CCCSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEE-ECCCSSSEEEECCCS-SCEEEEE
T ss_pred CcccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCC-CCccccceEeeeEEC-CeEEEEE
Confidence 466667799999999988765322 2235899999999872 012455 333444 799999999988876 4899999
Q ss_pred EEeCCCCCCCCCCCCCCceeEEEEEeCccccCCC-CCCCceEeEEEEeeCCCCCccEEEEEEEEEee
Q 040360 79 VQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGY-APENYLHFLSYRLRNAKGDKNGIINVSVRSLK 144 (198)
Q Consensus 79 V~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~-~~~~~~~~~sy~L~~~~Gk~~G~I~lsi~~f~ 144 (198)
||+.. .++|..++|++.+|+..- ..++ ....|..| ++.|+|++.++ +.
T Consensus 81 Vfh~a-----------~~fVAn~tV~~edL~~~ck~~~g-~~e~WvdL-----eP~Gkl~v~i~-~~ 129 (138)
T 2enj_A 81 VKGKN-----------VDLISETTVELYSLAERCRKNNG-KTEIWLEL-----KPQGRMLMNAR-YF 129 (138)
T ss_dssp EECSS-----------CSCCEEEEEESHHHHHHHHHTTT-CEEEEEEC-----BSSCEEEEEEE-EC
T ss_pred EEcCC-----------CCeeeEEEEEHHHHHhhhccCCC-ceEEEEec-----ccCcEEEEEEE-EE
Confidence 99632 469999999999999541 0012 24679888 67999999999 54
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.52 E-value=0.0009 Score=52.38 Aligned_cols=123 Identities=17% Similarity=0.170 Sum_probs=89.1
Q ss_pred ceEEEEEEEEeeCCCCC-CCCC--cCCcEEEEEECCCCcEEEeeeecCCCCCCeeeeEEEEEecCC--------CcEEEE
Q 040360 9 YRTIELTVLSGEDLRID-RRLI--KKNAFAIVQTDTSFDYCTTKVDESGGSHPSWNEKLVIELPMH--------ARFITV 77 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~-~~~~--~~dpYvvv~~~~~~~~~~T~v~~~~g~nP~WNE~f~f~v~~~--------~~~L~~ 77 (198)
-+.+||.|.++.-=+.- ...+ .+-.||++.+.. .+.+.|.+.. |.+|.+|-+.++.+..+ ...|.+
T Consensus 17 EnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~d-fEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 17 ENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD-FELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp CEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT-CCCEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEec-eEeeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 36799999988732210 0012 234467777766 6888999987 58999999999988654 358999
Q ss_pred EEEeCCCCCCCCCCCCCCceeEEEEEeCccccCCCCCCCceEeEEEEeeCCCC--CccEEEEEEEEEeeeCC
Q 040360 78 QVQCKSKSSSSGNNNNHNKIVGFARIPVSDFIGGYAPENYLHFLSYRLRNAKG--DKNGIINVSVRSLKVAA 147 (198)
Q Consensus 78 eV~~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~~~~~~~~~~~sy~L~~~~G--k~~G~I~lsi~~f~~~~ 147 (198)
|+..... .. -+.||.++|+|.++++.. +. ......|....| ..-|.|++.|| ++.+-
T Consensus 94 ELhqa~g---~~-----~~tla~~~I~l~~lLe~~--~~--i~g~~~L~g~~g~~~~~G~LeywiR-L~~Pi 152 (156)
T 2yrb_A 94 EVHQAYS---TE-----YETIAACQLKFHEILEKS--GR--IFCTASLIGTKGDIPNFGTVEYWFR-LRVSG 152 (156)
T ss_dssp EEEEECS---SC-----EEEEEEEEECCSHHHHCC--SC--EEEEEEECBSSSCCTTSEEEEEEEE-EEECC
T ss_pred EEEEeeC---CC-----ceEEEEEEEEhHHhhCcC--Cc--eEEEEEEEcCCCCcceEEEEEEEEE-Eeccc
Confidence 9977543 23 678999999999999763 22 234557888888 56899999999 88653
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.26 E-value=0.14 Score=42.01 Aligned_cols=60 Identities=13% Similarity=0.313 Sum_probs=42.6
Q ss_pred cEEEeeeecCCCCCCeeeeEEEEEecCC---CcEEEEEEEeCCCCCCCCCCCCCCceeEEEEEeCcc
Q 040360 44 DYCTTKVDESGGSHPSWNEKLVIELPMH---ARFITVQVQCKSKSSSSGNNNNHNKIVGFARIPVSD 107 (198)
Q Consensus 44 ~~~~T~v~~~~g~nP~WNE~f~f~v~~~---~~~L~~eV~~~~~~~~~g~~~~~d~~IG~a~IpL~~ 107 (198)
..++|-|...+ .+|.|+|++.+.||.+ ...|.|++++... ..+.+...+.+|.+-+||-+
T Consensus 77 se~~S~V~YHn-k~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~---~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQV-KQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS---QDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTC-SSCCCCEEEEEEECTTSSTTEEEEEEEEECCC---CSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcC-CCCCceEeEEEeeChhhcCCeEEEEEEEEecc---cccccccCCeeEEEEEEccc
Confidence 45677777765 8999999999999864 4689999987653 11100114578888888854
No 54
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=95.36 E-value=0.16 Score=50.51 Aligned_cols=95 Identities=13% Similarity=0.181 Sum_probs=61.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCC----cEEEeeeecCCCCCCeeeeEEEEEecC----CCcEEEEEEE
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSF----DYCTTKVDESGGSHPSWNEKLVIELPM----HARFITVQVQ 80 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~----~~~~T~v~~~~g~nP~WNE~f~f~v~~----~~~~L~~eV~ 80 (198)
.+.+.|+|+++.++.... ....+-||.+.+-... ...+|+.. .+.+|.|||.+.|++.- .+..|.|.||
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~--~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRV--PCSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCC--CTTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceecccc--CCCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 367999999999996433 2346788888876421 22334322 34688999999998742 3579999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCcccc
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFI 109 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~ 109 (198)
+... ...++.....||++.++|=|.-
T Consensus 431 ~~~~---~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 431 SVKG---RKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC---CC-------CCEEEEEESBCTT
T ss_pred EecC---ccCcccccceeEEeeeeeEccC
Confidence 8653 1100112457999999998764
No 55
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=94.85 E-value=0.29 Score=48.00 Aligned_cols=95 Identities=8% Similarity=0.212 Sum_probs=58.0
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC----CcEEEeeeecCCCCCCeeeeEEEEEecC----CCcEEEEEEE
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS----FDYCTTKVDESGGSHPSWNEKLVIELPM----HARFITVQVQ 80 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~----~~~~~T~v~~~~g~nP~WNE~f~f~v~~----~~~~L~~eV~ 80 (198)
...|.|+|.++.++... ...+-||.+.+-.. .....|+-..- ..+|.|||.+.|++.- .+..|.|.||
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccccCCcccEEEEEEE
Confidence 46899999999999643 34678888777532 12233433222 3689999999998742 3578999999
Q ss_pred eCCCCCCCC---C---CCCCCceeEEEEEeCccc
Q 040360 81 CKSKSSSSG---N---NNNHNKIVGFARIPVSDF 108 (198)
Q Consensus 81 ~~~~~~~~g---~---~~~~d~~IG~a~IpL~~l 108 (198)
+.... ..+ . .+.....||++.++|=+.
T Consensus 292 ~~~~~-~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 292 AVVEK-AKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEC-----------------CEEEEEEEEESBCT
T ss_pred EecCC-ccCccccccccccccceEEEEeeeEECC
Confidence 85320 001 0 000134788888888654
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=90.46 E-value=1.9 Score=42.29 Aligned_cols=95 Identities=12% Similarity=0.189 Sum_probs=55.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCcE---EEeeeecCCCCCCeeeeEEEEEecC----CCcEEEEEEEeC
Q 040360 10 RTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFDY---CTTKVDESGGSHPSWNEKLVIELPM----HARFITVQVQCK 82 (198)
Q Consensus 10 ~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~~---~~T~v~~~~g~nP~WNE~f~f~v~~----~~~~L~~eV~~~ 82 (198)
+.+.|.|+.+..+... .....+-||.+.+-...+. .+|.-..- ..+|.|||.+.|++.- .+..|.|.||+.
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEEC-CSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeecccc-CCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 6789999988752211 1134688888766532121 22322222 3679999999988742 357899999974
Q ss_pred CCCCCCCC------------CCCCCceeEEEEEeCcccc
Q 040360 83 SKSSSSGN------------NNNHNKIVGFARIPVSDFI 109 (198)
Q Consensus 83 ~~~~~~g~------------~~~~d~~IG~a~IpL~~l~ 109 (198)
.. .+. .+++...||++.++|=+..
T Consensus 296 ~~---~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AK---PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC-----------------------CEEEEEEEESBCTT
T ss_pred cc---CccccccccccccccccccceeEEEEeeeeecCC
Confidence 32 110 0112457899988887654
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=89.68 E-value=0.37 Score=47.96 Aligned_cols=70 Identities=13% Similarity=0.209 Sum_probs=46.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCcCCcEEEEEECCCCc----EEEeeeecCCCCCCeeeeEEEEEecC----CCcEEEEEEE
Q 040360 9 YRTIELTVLSGEDLRIDRRLIKKNAFAIVQTDTSFD----YCTTKVDESGGSHPSWNEKLVIELPM----HARFITVQVQ 80 (198)
Q Consensus 9 ~~~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~~~----~~~T~v~~~~g~nP~WNE~f~f~v~~----~~~~L~~eV~ 80 (198)
...+.|+|+++.++... ...+-||.+.+-...+ ...|+-.. ...+|.|||.+.|++.- .+..|.|.||
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~-~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEIS-GKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCC-SSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceeccccc-CCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 36899999999999643 2457776655533111 22333222 24689999999998742 3578999999
Q ss_pred eC
Q 040360 81 CK 82 (198)
Q Consensus 81 ~~ 82 (198)
+.
T Consensus 428 ~~ 429 (1092)
T 2y3a_A 428 AV 429 (1092)
T ss_dssp CC
T ss_pred Ee
Confidence 85
No 58
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=76.14 E-value=7.5 Score=29.90 Aligned_cols=92 Identities=12% Similarity=0.066 Sum_probs=58.6
Q ss_pred EEEEEEEEeeCCCCCCCCCcCCcEEEEEECCC-----CcEEEeeee-cCCCCCCeeeeEEEEEecC----CCcEEEEEEE
Q 040360 11 TIELTVLSGEDLRIDRRLIKKNAFAIVQTDTS-----FDYCTTKVD-ESGGSHPSWNEKLVIELPM----HARFITVQVQ 80 (198)
Q Consensus 11 ~LeVtVlsA~~L~~~~~~~~~dpYvvv~~~~~-----~~~~~T~v~-~~~g~nP~WNE~f~f~v~~----~~~~L~~eV~ 80 (198)
-|.|.|.+= +|+.. ..-.|||++|++-+. ...+.|.+. ...+.+=.||.+..+..+. +...+.||+.
T Consensus 15 ~l~v~Ie~i-glkda--~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfElk 91 (152)
T 2qzq_A 15 LLTLTIEKI-GLKDA--GQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFK 91 (152)
T ss_dssp EEEEEEEEE-ECTTG--GGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEEE
T ss_pred EEEEEEEEE-EeCCH--HHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEEE
Confidence 356665555 77642 234799999999652 345667765 2233455677666665442 2467999999
Q ss_pred eCCCCCCCCCCCCCCceeEEEEEeCccccCC
Q 040360 81 CKSKSSSSGNNNNHNKIVGFARIPVSDFIGG 111 (198)
Q Consensus 81 ~~~~~~~~g~~~~~d~~IG~a~IpL~~l~~~ 111 (198)
+... -.+ +-...+++.+.+.++..+
T Consensus 92 H~k~---kkk---k~S~kCw~f~~~d~i~~g 116 (152)
T 2qzq_A 92 HYKP---KKR---FTSTKCFAFMEMDEIKPG 116 (152)
T ss_dssp EEET---TTT---EEEEEEEEEEEGGGCCSE
T ss_pred Eecc---cce---eeeeeeEEEEEhhhcccC
Confidence 8754 220 133689999999988665
Done!