BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040362
         (356 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|4IDL|A Chain A, Low Melting Temperature Anti-cholera Toxin Llama Vhh
           Domain
          Length = 136

 Score = 30.0 bits (66), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 193 VIAHNTCPIR-VHWHVKA-NYKKHWLAKITITNFNNQRDFTQWTLVFQHPNLKNVTKVYR 250
           + + NT  IR + W+ +A   ++ W+A +T T   +  DF +        N  N   +  
Sbjct: 25  LASGNTASIRAMGWYRRAPGKQREWVASLTTTGTADYGDFVKGRFTISRDNANNAATLQM 84

Query: 251 FLYKPLNFYQPLNDTGMFY 269
              KP        DT ++Y
Sbjct: 85  DSLKP-------EDTAVYY 96


>pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From
           Candida Albicans In Complex With Laminaritriose At 1.7 A
          Length = 399

 Score = 28.9 bits (63), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G+ +    DC+K+ N +    R
Sbjct: 276 WGWDAKKESHWNVAGSWSAALTDCAKWLNGVNRGAR 311


>pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex
           With Unhydrolysed And Covalently Linked
           2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside
           At 1.9 A
          Length = 400

 Score = 28.1 bits (61), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 277 WGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGAR 312


>pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida
           Albicans At 1.9 A
          Length = 400

 Score = 28.1 bits (61), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 277 WGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGAR 312


>pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans
           At 1.85 A
          Length = 400

 Score = 28.1 bits (61), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 277 WGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGAR 312


>pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From
           Candida Albicans At 2 A
          Length = 399

 Score = 28.1 bits (61), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 276 WGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGAR 311


>pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A
           Resolution
 pdb|1EQC|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans In Complex
           With Castanospermine At 1.85 A
          Length = 394

 Score = 28.1 bits (61), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 271 WGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGAR 306


>pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
          Length = 394

 Score = 28.1 bits (61), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 271 WGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGAR 306


>pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida
           Albicans In Complex With Two Separately Bound
           Glucopyranoside Units At 1.8 A
          Length = 400

 Score = 28.1 bits (61), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 32  WMW-AKKEVIWSIVGAQATDQGDCSKFKNNIPHCCR 66
           W W AKKE  W++ G  +    DC+K+ N +    R
Sbjct: 277 WGWDAKKESHWNVAGQWSAALTDCAKWLNGVNRGAR 312


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.137    0.452 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,926,897
Number of Sequences: 62578
Number of extensions: 452240
Number of successful extensions: 874
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 874
Number of HSP's gapped (non-prelim): 10
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)