Query         040363
Match_columns 548
No_of_seqs    365 out of 2967
Neff          7.9 
Searched_HMMs 29240
Date          Mon Mar 25 12:13:40 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040363hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 5.8E-52   2E-56  422.0  21.8  258  258-533    13-293 (299)
  2 3omv_A RAF proto-oncogene seri 100.0 1.3E-51 4.6E-56  420.1  22.7  257  256-528    34-299 (307)
  3 4aoj_A High affinity nerve gro 100.0 2.9E-51   1E-55  422.3  24.8  256  258-531    41-321 (329)
  4 4aw0_A HPDK1, 3-phosphoinositi 100.0   3E-52   1E-56  424.6  17.1  246  258-522    32-284 (311)
  5 4g3f_A NF-kappa-beta-inducing  100.0 1.2E-51 3.9E-56  425.0  20.4  261  257-536    57-323 (336)
  6 4b9d_A Serine/threonine-protei 100.0 7.1E-52 2.4E-56  428.5  18.0  249  257-523    23-277 (350)
  7 4fih_A Serine/threonine-protei 100.0 2.3E-51 7.9E-56  424.1  20.3  248  258-523    74-324 (346)
  8 4gt4_A Tyrosine-protein kinase 100.0 4.2E-51 1.4E-55  417.4  21.5  254  258-529    26-306 (308)
  9 3hyh_A Carbon catabolite-derep 100.0 1.2E-50 4.2E-55  406.8  21.2  244  258-523    13-263 (275)
 10 4fie_A Serine/threonine-protei 100.0 3.6E-50 1.2E-54  425.1  22.6  248  258-523   151-401 (423)
 11 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-50 5.4E-55  411.5  17.6  247  257-523    23-282 (304)
 12 3fpq_A Serine/threonine-protei 100.0 5.7E-50   2E-54  405.1  20.8  246  260-523    28-283 (290)
 13 3hmm_A TGF-beta receptor type- 100.0 1.2E-49 4.1E-54  406.1  22.6  265  258-530     3-298 (303)
 14 4ase_A Vascular endothelial gr 100.0 5.4E-50 1.8E-54  416.4  19.9  266  250-532    56-350 (353)
 15 4g31_A Eukaryotic translation  100.0 1.2E-48 4.1E-53  397.7  13.1  247  258-523     5-280 (299)
 16 4f9c_A Cell division cycle 7-r 100.0 1.8E-47   6E-52  399.2  21.6  259  255-523    18-353 (361)
 17 4b99_A Mitogen-activated prote 100.0 9.1E-47 3.1E-51  398.4  20.6  255  257-523    53-345 (398)
 18 3uto_A Twitchin; kinase, muscl 100.0 1.4E-45 4.6E-50  407.1  20.0  251  257-523   156-411 (573)
 19 3uim_A Brassinosteroid insensi 100.0   5E-45 1.7E-49  373.6  22.2  283  245-527    17-309 (326)
 20 2qkw_B Protein kinase; three-h 100.0 1.1E-44 3.7E-49  370.8  24.2  279  250-531    31-317 (321)
 21 3v5w_A G-protein coupled recep 100.0 3.3E-45 1.1E-49  404.4  21.7  248  257-523   188-450 (689)
 22 4hcu_A Tyrosine-protein kinase 100.0 4.3E-43 1.5E-47  349.4  22.3  257  257-530     9-267 (269)
 23 3s95_A LIMK-1, LIM domain kina 100.0 6.9E-43 2.4E-47  355.4  21.7  260  257-532     9-285 (310)
 24 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.1E-43 1.8E-47  348.4  19.9  257  257-531     7-266 (268)
 25 1csn_A Casein kinase-1; phosph 100.0 2.1E-42 7.4E-47  348.7  23.5  276  257-543     9-297 (298)
 26 3fe3_A MAP/microtubule affinit 100.0 1.5E-42   5E-47  357.5  22.6  246  257-523    14-265 (328)
 27 3gen_A Tyrosine-protein kinase 100.0 3.3E-43 1.1E-47  352.6  16.6  256  257-530    23-281 (283)
 28 2nru_A Interleukin-1 receptor- 100.0 9.1E-42 3.1E-46  346.1  26.4  277  246-529    13-306 (307)
 29 3zgw_A Maternal embryonic leuc 100.0 1.2E-42 4.1E-47  361.0  20.3  249  256-523     8-261 (347)
 30 4eqm_A Protein kinase; transfe 100.0 1.8E-42 6.3E-47  350.5  20.9  268  257-538    10-284 (294)
 31 2psq_A Fibroblast growth facto 100.0   4E-42 1.4E-46  360.0  23.7  259  257-533    80-368 (370)
 32 3kul_A Ephrin type-A receptor  100.0 5.1E-42 1.8E-46  352.5  24.0  260  257-533    48-317 (325)
 33 3soc_A Activin receptor type-2 100.0 1.9E-42 6.4E-47  355.0  20.0  267  257-531    23-320 (322)
 34 3fxz_A Serine/threonine-protei 100.0 4.5E-42 1.5E-46  348.3  22.5  249  257-523    19-270 (297)
 35 3q4u_A Activin receptor type-1 100.0 3.1E-42 1.1E-46  348.0  20.7  259  257-527     7-300 (301)
 36 3p86_A Serine/threonine-protei 100.0 9.1E-42 3.1E-46  348.3  23.3  263  255-533    34-302 (309)
 37 1o6l_A RAC-beta serine/threoni 100.0   1E-41 3.4E-46  352.7  23.7  247  257-523     4-261 (337)
 38 3t9t_A Tyrosine-protein kinase 100.0 8.5E-42 2.9E-46  338.8  21.5  257  257-530     7-265 (267)
 39 2yab_A Death-associated protei 100.0 6.4E-42 2.2E-46  357.4  21.3  250  257-523    11-273 (361)
 40 3niz_A Rhodanese family protei 100.0 6.5E-42 2.2E-46  349.4  20.5  258  257-523    20-301 (311)
 41 3vhe_A Vascular endothelial gr 100.0 2.9E-42 9.8E-47  357.6  17.9  267  249-531    13-357 (359)
 42 2izr_A Casein kinase I isoform 100.0 7.8E-42 2.7E-46  351.2  20.2  268  257-536     8-288 (330)
 43 3uzp_A CKI-delta, CKID, casein 100.0 3.6E-41 1.2E-45  339.4  24.5  275  257-544     8-295 (296)
 44 4euu_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45  344.5  24.7  266  258-528     9-308 (319)
 45 4aw2_A Serine/threonine-protei 100.0 2.1E-42 7.3E-47  369.8  16.4  263  248-523    64-339 (437)
 46 1tki_A Titin; serine kinase, m 100.0 5.7E-42 1.9E-46  351.8  18.7  251  257-523     4-258 (321)
 47 3cbl_A C-FES, proto-oncogene t 100.0 9.6E-42 3.3E-46  357.7  20.8  257  256-530   112-375 (377)
 48 3tt0_A Basic fibroblast growth 100.0 3.5E-41 1.2E-45  354.0  24.7  266  257-539    68-362 (382)
 49 1mp8_A Focal adhesion kinase 1 100.0 1.2E-41   4E-46  341.5  19.9  258  257-532    14-279 (281)
 50 1luf_A Muscle-specific tyrosin 100.0 1.3E-41 4.5E-46  350.1  20.6  265  252-533    41-339 (343)
 51 1ob3_A PFPK5, cell division co 100.0 2.6E-41 8.8E-46  340.4  22.3  254  258-523     2-281 (288)
 52 4hgt_A Casein kinase I isoform 100.0 3.2E-41 1.1E-45  339.5  22.9  275  256-543     7-294 (296)
 53 3ugc_A Tyrosine-protein kinase 100.0 1.1E-41 3.9E-46  343.7  19.6  262  257-531     9-293 (295)
 54 3lb7_A RAF proto-oncogene seri 100.0   8E-41 2.7E-45  340.9  26.0  259  257-531    35-302 (307)
 55 3o0g_A Cell division protein k 100.0 1.7E-41 5.8E-46  342.2  20.5  258  258-523     2-283 (292)
 56 2qol_A Ephrin receptor; recept 100.0 1.7E-41 5.6E-46  355.7  21.2  258  257-532    44-312 (373)
 57 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.2E-42 3.1E-46  355.2  18.8  247  257-523    22-281 (353)
 58 2ivs_A Proto-oncogene tyrosine 100.0 4.1E-41 1.4E-45  341.9  22.8  258  257-531    22-313 (314)
 59 3op5_A Serine/threonine-protei 100.0 1.3E-41 4.3E-46  354.7  19.4  278  257-544    34-344 (364)
 60 1fot_A TPK1 delta, CAMP-depend 100.0 4.5E-41 1.5E-45  345.0  22.9  244  257-523     5-259 (318)
 61 3v8s_A RHO-associated protein  100.0 7.6E-42 2.6E-46  362.7  17.7  257  251-523    62-330 (410)
 62 4dc2_A Protein kinase C IOTA t 100.0 2.8E-41 9.7E-46  356.7  21.7  252  257-523    51-319 (396)
 63 2c30_A Serine/threonine-protei 100.0   1E-40 3.5E-45  342.2  24.9  246  260-523    47-295 (321)
 64 1qpc_A LCK kinase; alpha beta  100.0 8.1E-41 2.8E-45  334.5  23.3  259  256-532    11-272 (279)
 65 4e5w_A Tyrosine-protein kinase 100.0 3.5E-41 1.2E-45  340.7  20.8  260  258-529    21-302 (302)
 66 3tki_A Serine/threonine-protei 100.0 1.5E-41 5.3E-46  348.7  18.4  251  257-523     6-262 (323)
 67 2vd5_A DMPK protein; serine/th 100.0 7.7E-42 2.6E-46  362.9  16.6  262  248-523    51-328 (412)
 68 1t46_A HOMO sapiens V-KIT hard 100.0   3E-41   1E-45  342.7  20.0  260  257-532    22-310 (313)
 69 2y0a_A Death-associated protei 100.0 2.4E-41 8.1E-46  347.7  19.4  249  258-523    11-272 (326)
 70 1qcf_A Haematopoetic cell kina 100.0 2.9E-41 9.9E-46  362.9  20.7  258  255-531   185-446 (454)
 71 2zv2_A Calcium/calmodulin-depe 100.0 7.3E-41 2.5E-45  338.6  22.0  248  257-523    12-293 (298)
 72 3a8x_A Protein kinase C IOTA t 100.0 5.6E-41 1.9E-45  348.1  21.6  251  258-523     9-276 (345)
 73 3mdy_A Bone morphogenetic prot 100.0 5.6E-41 1.9E-45  344.3  21.4  269  255-532    34-334 (337)
 74 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.5E-41 8.7E-46  349.5  18.8  245  257-523     8-259 (336)
 75 3soa_A Calcium/calmodulin-depe 100.0 8.6E-41 2.9E-45  358.2  23.6  251  257-523    10-268 (444)
 76 1xjd_A Protein kinase C, theta 100.0 2.4E-41 8.2E-46  351.0  18.5  247  256-522    15-269 (345)
 77 3c0i_A Peripheral plasma membr 100.0 1.2E-41   4E-46  353.7  16.1  250  258-523    24-287 (351)
 78 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-40 3.8E-45  339.5  22.9  259  257-534     7-268 (307)
 79 1rjb_A FL cytokine receptor; k 100.0   4E-41 1.4E-45  347.2  19.6  262  256-533    43-338 (344)
 80 2w4o_A Calcium/calmodulin-depe 100.0 5.7E-42 1.9E-46  355.9  13.4  252  256-523    51-306 (349)
 81 2xir_A Vascular endothelial gr 100.0 3.8E-41 1.3E-45  342.4  19.1  268  249-532    18-313 (316)
 82 4f0f_A Serine/threonine-protei 100.0   9E-41 3.1E-45  335.5  21.5  253  257-527    18-287 (287)
 83 1rdq_E PKA C-alpha, CAMP-depen 100.0 9.5E-41 3.2E-45  347.1  22.3  243  258-523    41-294 (350)
 84 3kfa_A Tyrosine-protein kinase 100.0 3.8E-41 1.3E-45  338.1  18.4  262  256-534    11-276 (288)
 85 2bdw_A Hypothetical protein K1 100.0 5.9E-41   2E-45  350.1  20.4  250  257-523    28-285 (362)
 86 4fvq_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46  342.0  14.6  261  257-540     7-286 (289)
 87 3dtc_A Mitogen-activated prote 100.0 5.4E-41 1.9E-45  334.1  19.2  252  257-527     6-271 (271)
 88 2i0e_A Protein kinase C-beta I 100.0 8.9E-41   3E-45  347.7  21.6  248  256-523    18-277 (353)
 89 3cc6_A Protein tyrosine kinase 100.0 6.3E-41 2.2E-45  335.9  19.6  258  257-532    11-276 (281)
 90 3g2f_A Bone morphogenetic prot 100.0 2.1E-40 7.1E-45  340.4  23.9  266  257-534    12-323 (336)
 91 1u59_A Tyrosine-protein kinase 100.0 1.9E-40 6.3E-45  333.8  23.0  264  257-538     8-281 (287)
 92 1k9a_A Carboxyl-terminal SRC k 100.0 1.8E-40   6E-45  356.4  23.9  253  255-530   190-446 (450)
 93 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-40 4.4E-45  335.5  21.4  258  257-529    23-288 (289)
 94 3uc3_A Serine/threonine-protei 100.0 7.2E-41 2.5E-45  349.2  20.1  252  257-523    19-275 (361)
 95 4ejn_A RAC-alpha serine/threon 100.0 7.1E-41 2.4E-45  358.9  20.6  248  256-523   146-405 (446)
 96 3l9p_A Anaplastic lymphoma kin 100.0   5E-41 1.7E-45  351.1  18.8  259  257-533    70-349 (367)
 97 3kmu_A ILK, integrin-linked ki 100.0 1.4E-40 4.9E-45  330.0  21.2  252  257-529     9-270 (271)
 98 2pmi_A Negative RE, cyclin-dep 100.0 9.5E-41 3.2E-45  341.5  20.5  255  257-523     4-294 (317)
 99 4fr4_A YANK1, serine/threonine 100.0 1.5E-40 5.1E-45  349.8  22.4  247  258-522    15-271 (384)
100 1kob_A Twitchin; kinase, intra 100.0 8.4E-41 2.9E-45  352.2  20.3  251  257-523    50-305 (387)
101 3a62_A Ribosomal protein S6 ki 100.0 1.3E-40 4.4E-45  342.4  20.9  247  257-523    16-277 (327)
102 3cok_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45  332.8  20.4  248  257-523    10-263 (278)
103 3f66_A Hepatocyte growth facto 100.0 2.5E-40 8.5E-45  334.1  22.5  260  257-533    24-295 (298)
104 2pvf_A Fibroblast growth facto 100.0 3.6E-40 1.2E-44  339.3  24.1  261  257-534    34-323 (334)
105 4eut_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45  350.7  21.7  269  257-530     8-310 (396)
106 3pls_A Macrophage-stimulating  100.0 3.2E-40 1.1E-44  332.7  23.0  260  259-534    22-292 (298)
107 3qup_A Tyrosine-protein kinase 100.0 7.1E-41 2.4E-45  342.3  18.4  262  255-533    20-302 (323)
108 3qd2_B Eukaryotic translation  100.0 4.6E-41 1.6E-45  343.5  16.7  248  257-523     5-326 (332)
109 3poz_A Epidermal growth factor 100.0 8.8E-41   3E-45  343.3  18.7  254  258-530    15-279 (327)
110 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.5E-40   5E-45  357.2  21.3  258  256-532   182-443 (452)
111 2jii_A Serine/threonine-protei 100.0 7.2E-41 2.4E-45  347.3  18.2  273  258-542    42-349 (352)
112 1opk_A P150, C-ABL, proto-onco 100.0 8.5E-41 2.9E-45  363.2  19.5  257  257-531   219-480 (495)
113 3gni_B Strad alpha; kinase fol 100.0 1.6E-40 5.4E-45  349.3  20.8  261  257-523    24-334 (389)
114 1b6c_B TGF-B superfamily recep 100.0 2.4E-40 8.3E-45  340.5  21.7  266  255-532    39-339 (342)
115 2wqm_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45  338.2  19.3  267  257-538    31-306 (310)
116 3lxl_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45  340.9  19.8  264  258-533    23-307 (327)
117 1p4o_A Insulin-like growth fac 100.0 1.1E-40 3.7E-45  340.5  18.5  262  255-533    22-303 (322)
118 1mqb_A Ephrin type-A receptor  100.0 7.9E-40 2.7E-44  337.1  24.6  261  257-535    43-315 (333)
119 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-41 5.7E-46  347.1  11.8  262  260-535    33-316 (318)
120 3kk8_A Calcium/calmodulin depe 100.0 7.4E-40 2.5E-44  328.1  23.2  250  257-523     5-262 (284)
121 3kex_A Receptor tyrosine-prote 100.0 1.3E-40 4.5E-45  341.5  17.8  256  258-531    13-278 (325)
122 3fdn_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44  329.9  20.6  246  256-523     7-258 (279)
123 1xbb_A Tyrosine-protein kinase 100.0   2E-40 6.9E-45  334.2  18.7  265  256-539    14-289 (291)
124 2x4f_A Myosin light chain kina 100.0 2.9E-40   1E-44  346.3  20.6  247  261-523    92-343 (373)
125 1byg_A CSK, protein (C-termina 100.0 1.4E-40 4.8E-45  332.9  17.2  252  257-530    20-274 (278)
126 3g33_A Cell division protein k 100.0 5.3E-40 1.8E-44  333.8  21.7  255  256-523     7-297 (308)
127 2y94_A 5'-AMP-activated protei 100.0 6.3E-40 2.1E-44  354.3  23.5  246  257-523    15-267 (476)
128 3kn6_A Ribosomal protein S6 ki 100.0 4.1E-41 1.4E-45  345.9  13.5  249  263-523    16-271 (325)
129 1fvr_A Tyrosine-protein kinase 100.0 2.8E-40 9.7E-45  338.9  19.7  257  258-533    25-304 (327)
130 2a2a_A Death-associated protei 100.0 2.6E-40 8.9E-45  338.5  19.2  249  258-523    12-273 (321)
131 3brb_A Proto-oncogene tyrosine 100.0   2E-40   7E-45  337.4  18.1  265  250-532    26-311 (313)
132 3lzb_A Epidermal growth factor 100.0 3.1E-40 1.1E-44  339.5  19.6  257  257-531    14-280 (327)
133 2r5t_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44  345.6  20.4  243  257-519    37-286 (373)
134 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-40 3.8E-45  340.1  16.0  243  258-523    57-305 (311)
135 2h34_A Serine/threonine-protei 100.0 8.9E-40 3.1E-44  332.9  22.5  260  257-532    33-299 (309)
136 2eue_A Carbon catabolite derep 100.0 2.9E-40   1E-44  330.0  18.6  244  258-523    13-263 (275)
137 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-40 4.8E-45  346.1  16.9  253  257-524    53-323 (355)
138 2acx_A G protein-coupled recep 100.0 3.6E-40 1.2E-44  362.2  20.8  252  256-523   182-445 (576)
139 3hko_A Calcium/calmodulin-depe 100.0 7.4E-40 2.5E-44  337.6  21.1  254  256-523    24-331 (345)
140 3oz6_A Mitogen-activated prote 100.0 2.3E-40 7.7E-45  348.2  17.5  255  256-523     7-329 (388)
141 3c1x_A Hepatocyte growth facto 100.0 1.1E-39 3.7E-44  342.0  22.6  258  259-534    90-360 (373)
142 2qr7_A Ribosomal protein S6 ki 100.0 3.3E-40 1.1E-44  341.9  18.3  252  257-523    21-278 (342)
143 3ork_A Serine/threonine protei 100.0   3E-40   1E-44  336.6  17.6  258  257-529    11-281 (311)
144 2i1m_A Macrophage colony-stimu 100.0 4.4E-40 1.5E-44  337.8  18.8  259  256-531    44-328 (333)
145 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.4E-40 2.9E-44  357.9  22.1  251  257-522   184-448 (543)
146 3n9x_A Phosphotransferase; mal 100.0 6.3E-40 2.2E-44  350.2  20.6  196  257-457    25-252 (432)
147 2yex_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44  326.7  19.5  251  257-523     6-262 (276)
148 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-39 4.2E-44  339.6  22.3  254  256-532    63-342 (365)
149 3is5_A Calcium-dependent prote 100.0 5.6E-40 1.9E-44  330.4  19.1  248  258-523    22-279 (285)
150 3mtl_A Cell division protein k 100.0 3.2E-40 1.1E-44  338.6  17.5  254  258-523     2-282 (324)
151 3rp9_A Mitogen-activated prote 100.0 5.1E-40 1.7E-44  353.2  19.8  192  257-453    52-280 (458)
152 1nxk_A MAP kinase-activated pr 100.0 8.1E-40 2.8E-44  346.1  20.9  252  257-523    60-322 (400)
153 2a19_B Interferon-induced, dou 100.0 2.7E-40 9.4E-45  330.6  16.3  250  257-532    10-277 (284)
154 3dbq_A Dual specificity protei 100.0 2.7E-40 9.4E-45  341.8  16.7  249  257-523     8-274 (343)
155 1ua2_A CAK, cell division prot 100.0 1.2E-39 4.1E-44  337.4  21.5  256  256-523     8-292 (346)
156 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-39 4.7E-44  325.2  20.7  254  257-528     8-269 (277)
157 3ttj_A Mitogen-activated prote 100.0 2.8E-40 9.5E-45  356.3  16.8  195  257-460    61-266 (464)
158 2v62_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45  342.2  15.9  262  257-528    36-327 (345)
159 4agu_A Cyclin-dependent kinase 100.0 1.2E-39 4.2E-44  331.1  20.1  257  258-523     3-285 (311)
160 3eqc_A Dual specificity mitoge 100.0 1.5E-39 5.1E-44  338.0  21.1  252  257-523    32-325 (360)
161 2ozo_A Tyrosine-protein kinase 100.0 1.4E-39 4.8E-44  362.4  22.3  264  257-539   334-608 (613)
162 3com_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44  329.8  21.7  252  256-523    27-279 (314)
163 3llt_A Serine/threonine kinase 100.0 5.3E-40 1.8E-44  341.1  17.6  200  253-460    30-262 (360)
164 2vgo_A Serine/threonine-protei 100.0   2E-39 6.9E-44  325.5  21.1  245  257-523    13-263 (284)
165 1cm8_A Phosphorylated MAP kina 100.0 1.2E-39 3.9E-44  340.9  20.0  250  257-523    24-308 (367)
166 3dls_A PAS domain-containing s 100.0 3.2E-40 1.1E-44  340.8  15.6  240  257-523    23-275 (335)
167 2buj_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44  333.3  18.4  258  257-529    28-306 (317)
168 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.2E-40 1.8E-44  337.8  17.0  255  256-523    32-319 (329)
169 3bhy_A Death-associated protei 100.0 8.3E-40 2.8E-44  327.6  18.0  254  258-528     5-273 (283)
170 2w1i_A JAK2; chromosomal rearr 100.0   2E-39 6.9E-44  332.6  21.1  261  257-530    40-323 (326)
171 3pfq_A PKC-B, PKC-beta, protei 100.0 2.1E-39   7E-44  364.6  23.1  248  256-523   339-598 (674)
172 2h8h_A Proto-oncogene tyrosine 100.0 6.3E-40 2.2E-44  359.7  18.4  257  256-531   265-525 (535)
173 3i6u_A CDS1, serine/threonine- 100.0 5.9E-40   2E-44  349.2  17.7  251  256-523   133-400 (419)
174 3gxj_A TGF-beta receptor type- 100.0 4.5E-42 1.5E-46  346.8   1.2  262  258-531     3-299 (303)
175 3nsz_A CK II alpha, casein kin 100.0 9.7E-40 3.3E-44  334.6  18.5  254  257-523    35-320 (330)
176 2ac3_A MAP kinase-interacting  100.0 5.7E-40   2E-44  334.3  16.7  256  258-523    12-296 (316)
177 1u46_A ACK-1, activated CDC42  100.0 1.6E-39 5.4E-44  326.6  19.4  256  258-530    18-285 (291)
178 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.8E-40 9.6E-45  336.7  13.9  269  254-541    29-314 (319)
179 2zmd_A Dual specificity protei 100.0 8.4E-40 2.9E-44  344.8  18.0  248  258-523    56-321 (390)
180 3mi9_A Cell division protein k 100.0 2.1E-39 7.1E-44  335.7  20.3  199  258-460    17-232 (351)
181 2h6d_A 5'-AMP-activated protei 100.0 4.1E-39 1.4E-43  321.3  21.6  246  257-523    10-262 (276)
182 3a7i_A MST3 kinase, serine/thr 100.0 1.9E-39 6.4E-44  328.8  19.3  247  258-524    22-272 (303)
183 1u5q_A Serine/threonine protei 100.0 1.8E-39 6.3E-44  337.0  19.7  244  258-523    54-306 (348)
184 2rku_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43  325.5  20.8  246  258-523    15-266 (294)
185 3mwu_A Calmodulin-domain prote 100.0 2.7E-39 9.2E-44  350.3  21.5  248  258-523    22-277 (486)
186 3q5i_A Protein kinase; CDPK, m 100.0 3.7E-39 1.3E-43  350.9  22.4  249  257-523    35-302 (504)
187 3pg1_A Mitogen-activated prote 100.0 1.8E-39 6.3E-44  337.3  19.1  265  246-523    10-317 (362)
188 3lij_A Calcium/calmodulin depe 100.0 3.8E-39 1.3E-43  349.9  22.4  253  258-528    37-299 (494)
189 2jam_A Calcium/calmodulin-depe 100.0 4.3E-39 1.5E-43  326.5  21.1  249  257-523     8-262 (304)
190 2owb_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43  332.8  20.2  247  257-523    40-292 (335)
191 2vwi_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44  332.2  13.4  258  256-523    13-288 (303)
192 2r3i_A Cell division protein k 100.0 6.1E-39 2.1E-43  323.8  21.7  255  257-523     2-284 (299)
193 3nyv_A Calmodulin-domain prote 100.0 2.1E-39   7E-44  350.8  19.2  248  258-523    26-282 (484)
194 1x8b_A WEE1HU, WEE1-like prote 100.0 1.7E-39   6E-44  324.6  17.2  242  257-523    10-280 (289)
195 2yfx_A Tyrosine-protein kinase 100.0 3.5E-39 1.2E-43  330.7  19.8  260  257-533    29-308 (327)
196 3byv_A Rhoptry kinase; malaria 100.0 8.9E-40   3E-44  342.5  15.3  244  257-528    72-367 (377)
197 3fme_A Dual specificity mitoge 100.0 1.8E-39 6.2E-44  325.9  16.3  249  257-523     6-267 (290)
198 2pml_X PFPK7, Ser/Thr protein  100.0   6E-39   2E-43  331.2  20.4  252  257-523    30-323 (348)
199 1zy4_A Serine/threonine-protei 100.0 5.7E-39   2E-43  323.4  19.8  251  257-523     5-284 (303)
200 2w5a_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44  325.2  15.2  253  257-524     5-269 (279)
201 3lm5_A Serine/threonine-protei 100.0   2E-39 6.9E-44  333.1  16.6  251  257-523    27-288 (327)
202 3sv0_A Casein kinase I-like; t 100.0 2.9E-39 9.9E-44  349.7  18.6  271  257-538     6-287 (483)
203 3qyz_A Mitogen-activated prote 100.0 4.5E-39 1.5E-43  335.4  19.3  257  257-523    26-314 (364)
204 2y7j_A Phosphorylase B kinase  100.0 1.1E-38 3.8E-43  333.1  22.2  252  255-523    91-360 (365)
205 1wak_A Serine/threonine-protei 100.0 9.1E-39 3.1E-43  334.9  21.3  259  257-523    36-392 (397)
206 3eb0_A Putative uncharacterize 100.0 3.7E-39 1.3E-43  338.5  18.2  258  255-527     4-328 (383)
207 2ycf_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43  330.3  17.2  249  257-522     9-274 (322)
208 3an0_A Dual specificity mitoge 100.0   1E-39 3.5E-44  336.4  13.5  251  255-523    48-311 (340)
209 3ll6_A Cyclin G-associated kin 100.0 2.3E-39 7.8E-44  331.6  16.1  257  257-532    27-311 (337)
210 1t4h_A Serine/threonine-protei 100.0 1.3E-38 4.6E-43  320.4  21.0  248  258-523    26-283 (290)
211 2j7t_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43  325.7  16.9  251  257-523    18-276 (302)
212 2clq_A Mitogen-activated prote 100.0 6.2E-39 2.1E-43  322.9  18.2  250  258-523    22-279 (295)
213 2fst_X Mitogen-activated prote 100.0 2.3E-39 7.9E-44  338.7  15.4  251  256-523    27-312 (367)
214 2wtk_C Serine/threonine-protei 100.0 3.5E-38 1.2E-42  319.2  23.5  248  257-523     4-264 (305)
215 4aaa_A Cyclin-dependent kinase 100.0   2E-39 6.8E-44  333.3  14.0  255  257-523    24-307 (331)
216 1phk_A Phosphorylase kinase; g 100.0 2.4E-38 8.1E-43  319.3  21.6  249  257-522    16-283 (298)
217 2x7f_A TRAF2 and NCK-interacti 100.0 5.4E-39 1.9E-43  328.5  16.9  252  255-523    21-287 (326)
218 2j0j_A Focal adhesion kinase 1 100.0 1.3E-38 4.6E-43  357.0  21.6  259  256-532   388-654 (656)
219 3rgf_A Cyclin-dependent kinase 100.0 4.5E-39 1.5E-43  340.3  16.6  200  258-461    20-240 (405)
220 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-38 4.7E-43  329.1  19.4  254  257-523    10-306 (353)
221 2xrw_A Mitogen-activated prote 100.0 6.8E-39 2.3E-43  335.2  17.0  195  257-460    24-229 (371)
222 4fl3_A Tyrosine-protein kinase 100.0 2.2E-38 7.5E-43  354.0  22.1  247  264-530   375-632 (635)
223 3q60_A ROP5B; pseudokinase, tr 100.0 2.4E-39 8.4E-44  338.3  13.5  251  258-522    62-352 (371)
224 1blx_A Cyclin-dependent kinase 100.0 3.8E-38 1.3E-42  321.9  21.4  255  256-523     9-297 (326)
225 1j1b_A Glycogen synthase kinas 100.0 1.1E-38 3.9E-43  339.3  17.5  251  258-523    54-337 (420)
226 3kvw_A DYRK2, dual specificity 100.0 2.3E-38 7.8E-43  338.0  19.3  197  257-461    96-303 (429)
227 4e7w_A Glycogen synthase kinas 100.0 1.3E-38 4.3E-43  336.1  17.1  252  258-523    40-322 (394)
228 4exu_A Mitogen-activated prote 100.0 2.6E-38   9E-43  330.8  19.1  249  257-523    41-324 (371)
229 2wei_A Calmodulin-domain prote 100.0 6.6E-38 2.3E-42  315.1  20.0  249  257-523    21-277 (287)
230 3coi_A Mitogen-activated prote 100.0 8.2E-38 2.8E-42  324.2  20.9  249  257-523    23-306 (353)
231 2i6l_A Mitogen-activated prote 100.0 1.4E-38 4.7E-43  323.5  14.5  254  257-523    10-306 (320)
232 1z57_A Dual specificity protei 100.0   8E-38 2.7E-42  320.1  19.9  196  257-460    13-237 (339)
233 3cek_A Dual specificity protei 100.0 5.9E-38   2E-42  319.4  16.7  249  257-523    27-293 (313)
234 2dyl_A Dual specificity mitoge 100.0 2.2E-38 7.4E-43  322.3  13.3  250  257-523    24-284 (318)
235 3fhr_A MAP kinase-activated pr 100.0 9.7E-38 3.3E-42  322.1  18.3  251  257-523    27-288 (336)
236 2vx3_A Dual specificity tyrosi 100.0 2.6E-37   9E-42  324.3  21.6  199  256-460    52-261 (382)
237 3aln_A Dual specificity mitoge 100.0 4.8E-38 1.6E-42  322.1  15.5  251  257-523    21-286 (327)
238 3e3p_A Protein kinase, putativ 100.0 7.6E-38 2.6E-42  324.4  16.7  201  254-460    19-235 (360)
239 2iwi_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42  320.0  13.5  241  255-523    28-284 (312)
240 1q8y_A SR protein kinase; tran 100.0   6E-38 2.1E-42  326.5  13.8  258  258-523    19-334 (373)
241 2rio_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42  332.5  16.2  249  258-522    15-295 (434)
242 3a99_A Proto-oncogene serine/t 100.0 3.6E-38 1.2E-42  322.8  11.0  242  254-523    39-294 (320)
243 2eu9_A Dual specificity protei 100.0 3.2E-37 1.1E-41  318.0  18.2  196  257-460    18-242 (355)
244 3p23_A Serine/threonine-protei 100.0 2.4E-37 8.3E-42  330.4  14.5  247  258-522    24-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0   1E-36 3.5E-41  338.6  12.4  269  258-531    14-311 (676)
246 2pzi_A Probable serine/threoni 100.0 1.2E-35 4.2E-40  334.7  19.6  238  257-529    79-328 (681)
247 3uqc_A Probable conserved tran 100.0 4.1E-35 1.4E-39  296.0  18.9  231  258-531    31-267 (286)
248 3dzo_A Rhoptry kinase domain;  100.0 1.5E-35   5E-40  314.7  16.2  239  257-523    77-364 (413)
249 3m2w_A MAP kinase-activated pr 100.0   7E-35 2.4E-39  295.2  20.0  226  258-523    17-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41  312.3   7.1  188  257-457    19-277 (336)
251 4azs_A Methyltransferase WBDD; 100.0 6.3E-30 2.1E-34  281.9   3.1  183  266-457   242-438 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.6E-26 5.3E-31  253.4   6.6  182  261-457   339-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 5.6E-23 1.9E-27  206.9  10.6  164  250-443    82-275 (282)
254 1zth_A RIO1 serine protein kin  99.8 4.2E-19 1.4E-23  176.0  10.7  136  258-406    47-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 2.3E-16   8E-21  164.3   8.4  140  252-405    89-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.2 1.1E-11 3.6E-16  122.2   8.9  143  256-405    12-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 5.2E-11 1.8E-15  116.2   7.3  138  258-405    20-214 (264)
258 3sg8_A APH(2'')-ID; antibiotic  99.0 2.4E-10 8.2E-15  115.3   5.7  183  263-457    25-287 (304)
259 3dxp_A Putative acyl-COA dehyd  99.0 1.2E-09   4E-14  112.8  10.2  144  259-406    39-249 (359)
260 3r70_A Aminoglycoside phosphot  98.7 5.6E-08 1.9E-12   98.7  11.5  139  258-407    37-239 (320)
261 3tdw_A Gentamicin resistance p  98.5 9.7E-07 3.3E-11   89.0  12.5  138  262-406    23-225 (306)
262 3d1u_A Putative fructosamine-3  98.3 1.7E-06 5.9E-11   86.6  10.8   77  259-339    16-97  (288)
263 4gkh_A Aminoglycoside 3'-phosp  98.3 2.2E-06 7.7E-11   84.1   9.8  135  265-405    31-223 (272)
264 3ats_A Putative uncharacterize  98.3 1.4E-06 4.7E-11   89.4   8.1   79  262-340    24-121 (357)
265 3ovc_A Hygromycin-B 4-O-kinase  98.2   4E-06 1.4E-10   86.7  11.1   79  258-340    41-122 (362)
266 2q83_A YTAA protein; 2635576,   98.0 2.9E-05   1E-09   78.4  10.6  140  263-405    37-252 (346)
267 3a2e_A Ginkbilobin-2; domain 2  97.9 3.9E-06 1.3E-10   71.2   3.0   86   65-169    22-108 (108)
268 2olc_A MTR kinase, methylthior  97.9   3E-05   1E-09   80.7   9.5   74  262-337    34-120 (397)
269 3jr1_A Putative fructosamine-3  97.7 0.00013 4.5E-09   73.7  10.9   78  260-339    38-118 (312)
270 2e79_A Ginkbilobin-2; DUF26 fo  97.6 2.8E-05 9.7E-10   65.8   3.2   84   66-168    23-107 (108)
271 2pyw_A Uncharacterized protein  97.5 0.00026 8.8E-09   74.3   9.4   79  374-454   231-313 (420)
272 3f7w_A Putative fructosamine-3  97.5 0.00057   2E-08   67.6  11.3   78  258-339    15-97  (288)
273 2ppq_A HSK, HK, homoserine kin  97.4 0.00043 1.5E-08   69.5   9.3  142  263-405    27-217 (322)
274 3csv_A Aminoglycoside phosphot  97.2 0.00073 2.5E-08   68.2   9.1   33  374-406   182-218 (333)
275 1nw1_A Choline kinase (49.2 KD  97.2 0.00071 2.4E-08   71.3   9.0   74  262-339    77-159 (429)
276 3feg_A Choline/ethanolamine ki  97.1  0.0012 4.2E-08   68.3   8.7  139  263-405    55-254 (379)
277 3dxq_A Choline/ethanolamine ki  97.0  0.0013 4.5E-08   65.5   8.4   71  262-339    22-95  (301)
278 1zyl_A Hypothetical protein YI  97.0  0.0019 6.4E-08   64.9   9.4  140  263-405    31-223 (328)
279 2yle_A Protein spire homolog 1  96.9  0.0039 1.3E-07   59.1  10.1  101  337-454    33-133 (229)
280 2qg7_A Ethanolamine kinase PV0  96.6  0.0054 1.9E-07   65.1   9.4   74  262-339   112-188 (458)
281 3i1a_A Spectinomycin phosphotr  96.6  0.0075 2.6E-07   61.2  10.0   32  375-406   206-237 (339)
282 3c5i_A Choline kinase; choline  96.5  0.0042 1.4E-07   63.7   7.6   73  263-339    38-121 (369)
283 3f2s_A CK, chetk-alpha, cholin  96.0   0.018 6.2E-07   59.9   9.5  139  263-405    57-280 (401)
284 3mes_A Choline kinase; malaria  94.5    0.09 3.1E-06   55.0   8.7   74  262-339    74-157 (424)
285 3g15_A CK, chetk-alpha, cholin  92.9   0.045 1.5E-06   56.8   2.9   31  376-406   245-281 (401)
286 4ann_A ESSB; membrane protein,  85.6     1.2 4.2E-05   41.8   6.1  115  310-457    43-157 (215)
287 2ks1_B Epidermal growth factor  83.5    0.16 5.5E-06   35.0  -0.7   27  176-202    10-36  (44)
288 4ano_A ESSB; membrane protein,  83.3     1.9 6.3E-05   40.7   6.3  114  310-457    48-162 (219)
289 3cxl_A N-chimerin; SH2, RHO-GA  67.0    0.51 1.8E-05   49.8  -2.7   57  262-321   146-213 (463)
290 2l2t_A Receptor tyrosine-prote  53.7    0.77 2.6E-05   31.6  -2.8   26  177-202    10-35  (44)
291 1cja_A Protein (actin-fragmin   50.6      36  0.0012   34.0   7.5  141  260-405    71-237 (342)
292 2jwa_A Receptor tyrosine-prote  47.6     5.8  0.0002   27.2   0.9   17  187-203    21-37  (44)
293 3oja_A Leucine-rich immune mol  32.2     3.9 0.00013   43.1  -3.1   29  296-324   323-351 (487)
294 3ls8_A Phosphatidylinositol 3-  31.4 2.1E+02  0.0073   30.8  10.4   46  352-404   454-501 (614)
295 2l9u_A Receptor tyrosine-prote  30.7      21 0.00071   22.9   1.4   22  180-201     9-30  (40)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.8e-52  Score=421.97  Aligned_cols=258  Identities=24%  Similarity=0.393  Sum_probs=212.9

Q ss_pred             CCccceeeeeecCceEEEEEEEc------CCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS------NGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ++|.+.+.||+|+||+||+|++.      +++.||||++...  ...++|.+|+++|++++|||||++++++.+++..++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            67899999999999999999853      4788999999643  345689999999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhc------------cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEE
Q 040363          330 VYELCHNGNLSEWLYGK------------AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKL  397 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL  397 (548)
                      ||||+++|+|.++|...            ...+++.+++.++.|++.||.|||+++   ||||||||+|||++.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            99999999999999643            246899999999999999999999877   999999999999999999999


Q ss_pred             EeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHH
Q 040363          398 SDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVM  475 (548)
Q Consensus       398 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~  475 (548)
                      +|||+++........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...+     ..++...+.
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~~i~  244 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-----NNEVIECIT  244 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHH
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHH
Confidence            999999876543322 2334569999999999999999999999999999999999 899996432     344444444


Q ss_pred             hcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          476 RGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       476 ~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      .+..      +..+...|++    +.+++.+|+. ||++|||++||++.|+++.+.+..
T Consensus       245 ~~~~------~~~p~~~~~~----~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~  293 (299)
T 4asz_A          245 QGRV------LQRPRTCPQE----VYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV  293 (299)
T ss_dssp             HTCC------CCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred             cCCC------CCCCccchHH----HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence            4322      2234456665    4556666776 899999999999999998876544


No 2  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-51  Score=420.13  Aligned_cols=257  Identities=28%  Similarity=0.425  Sum_probs=203.1

Q ss_pred             hcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecC----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIIS----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ..+++.+.++||+|+||+||+|+++  ..||||++..    ....+.|.+|+.++++++|||||++++++.+ +..+|||
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            3578999999999999999999864  3699998842    2345689999999999999999999998865 5689999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC-
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ-  410 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~-  410 (548)
                      ||+++|+|.+++......+++.++..|+.|++.||+|||+.+   ||||||||+||||+.++.+||+|||+|+...... 
T Consensus       111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            999999999999777778999999999999999999999877   9999999999999999999999999998765332 


Q ss_pred             CcccccccCCCCccCcccccC---CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRN---HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ........||+.|||||++.+   ..|+.++|||||||+||||+||+.||...+    ....+...+..+...+  ..+.
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~----~~~~~~~~~~~~~~~p--~~~~  261 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN----NRDQIIFMVGRGYASP--DLSK  261 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC----CHHHHHHHHHTTCCCC--CSTT
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC----hHHHHHHHHhcCCCCC--Cccc
Confidence            233455789999999999864   468999999999999999999999996433    2333333333321111  1123


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhh
Q 040363          488 INGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKAL  528 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l  528 (548)
                      ++...+++    +.+++.+|+. +|++||||.||+++|+.+.
T Consensus       262 ~~~~~~~~----l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          262 LYKNCPKA----MKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             SCTTSCHH----HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             ccccchHH----HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            34455655    4556666776 8999999999999998764


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=2.9e-51  Score=422.27  Aligned_cols=256  Identities=25%  Similarity=0.392  Sum_probs=205.8

Q ss_pred             CCccceeeeeecCceEEEEEEEc------CCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS------NGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ++|.+.++||+|+||.||+|++.      +++.||||++...  ...++|.+|+++|++++|||||++++++.+++..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            57888899999999999999863      4789999999643  345689999999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhcc--------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCE
Q 040363          330 VYELCHNGNLSEWLYGKA--------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQA  395 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~  395 (548)
                      ||||+++|+|.+++....              .++++.+++.|+.|++.||+|||+.+   ||||||||+||||+.++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            999999999999996432              36899999999999999999999877   9999999999999999999


Q ss_pred             EEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHH
Q 040363          396 KLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKF  473 (548)
Q Consensus       396 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~  473 (548)
                      ||+|||+++....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||....     ..++...
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~~  272 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-----NTEAIDC  272 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-----HHHHHHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Confidence            9999999987654332 23345679999999999999999999999999999999999 899996432     3344444


Q ss_pred             HHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          474 VMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       474 ~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      +..+.      .+..+...+++    +.+++.+|+. ||++||||+||+++|+.+.+..
T Consensus       273 i~~g~------~~~~p~~~~~~----~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          273 ITQGR------ELERPRACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HHHTC------CCCCCTTCCHH----HHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             HHcCC------CCCCcccccHH----HHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            44432      22334456665    4556667776 8999999999999999988654


No 4  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=3e-52  Score=424.59  Aligned_cols=246  Identities=24%  Similarity=0.364  Sum_probs=212.7

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC-----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS-----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++..     +...+.+.+|+++|+.++|||||++++++++++..|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999999996 5799999999853     234568999999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC-
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ-  410 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~-  410 (548)
                      ||++||+|.+++. +.+.+++.++..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+|+.+.... 
T Consensus       112 Ey~~gG~L~~~i~-~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          112 SYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             CCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             ecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            9999999999995 4467999999999999999999999887   9999999999999999999999999999875433 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      ......++||+.|||||++.+..|+.++|||||||++|||++|+.||...+     ...+.+.+...       ++.++.
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~-------~~~~p~  255 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFAKIIKL-------EYDFPE  255 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHT-------CCCCCT
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC-------CCCCCc
Confidence            334556789999999999999999999999999999999999999996432     33333333332       234456


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVL  522 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~  522 (548)
                      .+++++.+++.+|+   ..||++|||++|++.
T Consensus       256 ~~s~~~~dli~~lL---~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          256 KFFPKARDLVEKLL---VLDATKRLGCEEMEG  284 (311)
T ss_dssp             TCCHHHHHHHHHHS---CSSGGGSTTSGGGTC
T ss_pred             ccCHHHHHHHHHHc---cCCHhHCcChHHHcC
Confidence            78999999888887   779999999998753


No 5  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.2e-51  Score=424.98  Aligned_cols=261  Identities=21%  Similarity=0.224  Sum_probs=213.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCH  335 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  335 (548)
                      .+.|++.++||+|+||.||+|++ .+|+.||||++..+..   ..+|+.+++.++|||||++++++.+++..||||||++
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  133 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE  133 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            45788999999999999999996 4699999999965432   2479999999999999999999999999999999999


Q ss_pred             CCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC-CEEEEeccCcccccCCCCc--
Q 040363          336 NGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF-QAKLSDFGLSKVMDIGQSY--  412 (548)
Q Consensus       336 ~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~-~~kL~DFGla~~~~~~~~~--  412 (548)
                      ||+|.+++. ..+.+++.++..++.|++.||+|||+++   ||||||||+||||+.+| .+||+|||+|+.+......  
T Consensus       134 gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~  209 (336)
T 4g3f_A          134 GGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS  209 (336)
T ss_dssp             TCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred             CCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence            999999995 4467999999999999999999999777   99999999999999988 6999999999887543211  


Q ss_pred             --ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          413 --VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       413 --~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                        ....++||+.|||||++.+..|+.++|||||||++|||++|+.||...+.... ...+    ....    ...+.++.
T Consensus       210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i----~~~~----~~~~~~~~  280 (336)
T 4g3f_A          210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKI----ASEP----PPIREIPP  280 (336)
T ss_dssp             ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHH----HHSC----CGGGGSCT
T ss_pred             eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHH----HcCC----CCchhcCc
Confidence              22346799999999999999999999999999999999999999975543332 2222    1211    11123456


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCC
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNS  536 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~  536 (548)
                      .+++++.+++.+++   ..||++|||+.|++++|..++.......+
T Consensus       281 ~~s~~~~~li~~~L---~~dP~~R~sa~el~~~l~~~l~~~~~l~h  323 (336)
T 4g3f_A          281 SCAPLTAQAIQEGL---RKEPVHRASAMELRRKVGKALQEVGGLKS  323 (336)
T ss_dssp             TSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHTTSSCS
T ss_pred             cCCHHHHHHHHHHc---cCCHhHCcCHHHHHHHHHHHHhhhhhccC
Confidence            67888888777766   66999999999999999999876655433


No 6  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=7.1e-52  Score=428.54  Aligned_cols=249  Identities=25%  Similarity=0.400  Sum_probs=205.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++++.||+|+||+||+|+. .+|+.||||++...    ...+.+.+|+.+|+.++|||||++++++++++..||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            36899999999999999999996 56999999998532    34568999999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          332 ELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      ||++||+|.+++.... ..+++.+++.|+.|++.||.|||+++   ||||||||+||||+.++.+||+|||+|+.+... 
T Consensus       103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-  178 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-  178 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred             eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence            9999999999996543 45789999999999999999999887   999999999999999999999999999876422 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      .......+||+.|||||++.+..|+.++|||||||++|||++|+.||...+     ...+...+..+.      .+.++.
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~------~~~~~~  247 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIISGS------FPPVSL  247 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTC------CCCCCT
T ss_pred             cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCC------CCCCCc
Confidence            122345679999999999999999999999999999999999999996432     333333333321      133455


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+++++.+++.+|+   ..||++|||+.|++++
T Consensus       248 ~~s~~~~~li~~~L---~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          248 HYSYDLRSLVSQLF---KRNPRDRPSVNSILEK  277 (350)
T ss_dssp             TSCHHHHHHHHHHT---CSSGGGSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHc---cCChhHCcCHHHHhcC
Confidence            68888888888777   6799999999999875


No 7  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=2.3e-51  Score=424.09  Aligned_cols=248  Identities=23%  Similarity=0.257  Sum_probs=209.5

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC--cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS--DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      +.|++.++||+|+||+||+|+. .+|+.||||++..  ....+.+.+|+.+|+.++|||||++++++.+++..||||||+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            5699999999999999999996 4699999999843  234457889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCccc
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVS  414 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  414 (548)
                      +||+|.+++..  +.+++.++..++.|++.||.|||+++   ||||||||+||||+.++.+||+|||+++.+.... ...
T Consensus       154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~  227 (346)
T 4fih_A          154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR  227 (346)
T ss_dssp             TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred             CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence            99999999843  56999999999999999999999887   9999999999999999999999999998875332 234


Q ss_pred             ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          415 SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       415 ~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|+.||...+     .......+....    ......+..+++
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~----~~~~~~~~~~s~  298 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLKAMKMIRDNL----PPRLKNLHKVSP  298 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSS----CCCCSCGGGSCH
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCC----CCCCCccccCCH
Confidence            56789999999999999999999999999999999999999996432     233333333221    111222346788


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          495 EAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ++.+++.+|+   ..||++|||+.|+++|
T Consensus       299 ~~~dli~~~L---~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          299 SLKGFLDRLL---VRDPAQRATAAELLKH  324 (346)
T ss_dssp             HHHHHHHHHS---CSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHHHc---CCChhHCcCHHHHhcC
Confidence            8888888777   6799999999999875


No 8  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=4.2e-51  Score=417.38  Aligned_cols=254  Identities=22%  Similarity=0.371  Sum_probs=209.7

Q ss_pred             CCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      +++++.++||+|+||+||+|.+      .+++.||||++...   ...++|.+|+.++++++|||||+++|++.+++..+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            4678889999999999999985      25689999999543   34578999999999999999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhc---------------cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC
Q 040363          329 LVYELCHNGNLSEWLYGK---------------AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF  393 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~  393 (548)
                      +||||+++|+|.++|...               ...+++.++..++.|++.||+|||+.+   ||||||||+||||+.++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence            999999999999999543               246899999999999999999999877   99999999999999999


Q ss_pred             CEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHH
Q 040363          394 QAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMA  471 (548)
Q Consensus       394 ~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~  471 (548)
                      .+||+|||+++....... .......||+.|||||++.++.|+.++|||||||+||||+| |+.||....     ...+.
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----~~~~~  257 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVV  257 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----HHHHH
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----HHHHH
Confidence            999999999987654332 23445679999999999999999999999999999999999 899996432     34444


Q ss_pred             HHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhh
Q 040363          472 KFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALD  529 (548)
Q Consensus       472 ~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~  529 (548)
                      ..+..+..      +..+...+++    +.+++.+|+. ||++||||+||+++|+...+
T Consensus       258 ~~i~~~~~------~~~p~~~~~~----~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          258 EMIRNRQV------LPCPDDCPAW----VYALMIECWNEFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             HHHHTTCC------CCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred             HHHHcCCC------CCCcccchHH----HHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence            44444322      1223345554    5667778887 79999999999999986543


No 9  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.2e-50  Score=406.76  Aligned_cols=244  Identities=24%  Similarity=0.355  Sum_probs=195.6

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.+.||+|+||+||+|.. .+|+.||+|++...     ...+.+.+|+.+++.++|||||++++++++++..|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999995 57999999998532     33567899999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+ +|+|.+++.. .+.+++.++..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.....  
T Consensus        93 Ey~-~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--  165 (275)
T 3hyh_A           93 EYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--  165 (275)
T ss_dssp             ECC-CEEHHHHHHH-SCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             eCC-CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence            999 6799999854 467999999999999999999999887   999999999999999999999999999876532  


Q ss_pred             cccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      ......+||+.|||||++.+..+ +.++|||||||++|||++|+.||...     ....+.+.+...       .+.++.
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~i~~~-------~~~~p~  233 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNG-------VYTLPK  233 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHT-------CCCCCT
T ss_pred             CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcC-------CCCCCC
Confidence            23345789999999999998876 58999999999999999999999643     234444444332       133455


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+++++.+++.+|+   ..||++|||++|+++|
T Consensus       234 ~~s~~~~~li~~~L---~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          234 FLSPGAAGLIKRML---IVNPLNRISIHEIMQD  263 (275)
T ss_dssp             TSCHHHHHHHHHHS---CSSGGGSCCHHHHHHC
T ss_pred             CCCHHHHHHHHHHc---cCChhHCcCHHHHHcC
Confidence            68889888888877   6799999999999874


No 10 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=3.6e-50  Score=425.11  Aligned_cols=248  Identities=23%  Similarity=0.258  Sum_probs=210.2

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC--cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS--DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      +.|++.++||+|+||.||+|+. .+|+.||||++..  ....+.+.+|+.+|+.++|||||++++++.+++..||||||+
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5699999999999999999996 4699999999843  234557899999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCccc
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVS  414 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  414 (548)
                      +||+|.+++.  ...+++.++..++.|++.||+|||+++   ||||||||+||||+.+|.+||+|||+|+.+.... ...
T Consensus       231 ~gG~L~~~i~--~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~  304 (423)
T 4fie_A          231 EGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR  304 (423)
T ss_dssp             TTEEHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred             CCCcHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence            9999999984  356999999999999999999999887   9999999999999999999999999998775332 234


Q ss_pred             ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          415 SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       415 ~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|+.||...+     .......+....    .........+++
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~----~~~~~~~~~~s~  375 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLKAMKMIRDNL----PPRLKNLHKVSP  375 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSC----CCCCSCTTSSCH
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCC----CCCCcccccCCH
Confidence            56789999999999999999999999999999999999999996432     233333333321    111223456788


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          495 EAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ++.++|.+|+   ..||++|||+.|+++|
T Consensus       376 ~~~dli~~~L---~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          376 SLKGFLDRLL---VRDPAQRATAAELLKH  401 (423)
T ss_dssp             HHHHHHHHHS---CSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHHHc---CCChhHCcCHHHHhcC
Confidence            9888888777   6799999999999875


No 11 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.6e-50  Score=411.47  Aligned_cols=247  Identities=26%  Similarity=0.291  Sum_probs=200.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE----cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL----SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~----~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      .++|++.+.||+|+||+||+|+.    .+++.||||++...    ....++.+|+++|+.++|||||++++++++++..|
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            36899999999999999999985    24789999998533    23347889999999999999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||++||+|.+++. +.+.+++.++..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+....
T Consensus       103 ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EEECCCTTCEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEEcCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            9999999999999995 4467999999999999999999999888   99999999999999999999999999986543


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .. ......+||+.|||||++.+..|+.++|||||||++|||++|+.||...+     ...+...+.+.       .+.+
T Consensus       179 ~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~-------~~~~  245 (304)
T 3ubd_A          179 HE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----RKETMTMILKA-------KLGM  245 (304)
T ss_dssp             ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCC
T ss_pred             CC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----HHHHHHHHHcC-------CCCC
Confidence            22 23345789999999999999999999999999999999999999996432     33333333332       2334


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCC-----HHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPS-----MEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT-----~~evl~~  523 (548)
                      +..+|+++.+++.+|+   ..||++|||     ++|+++|
T Consensus       246 p~~~s~~~~~li~~~L---~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          246 PQFLSPEAQSLLRMLF---KRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             CTTSCHHHHHHHHHHT---CSSGGGSTTCSTTTHHHHHTS
T ss_pred             CCcCCHHHHHHHHHHc---ccCHHHCCCCCcCCHHHHHcC
Confidence            5568889888888777   679999998     4677653


No 12 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=5.7e-50  Score=405.09  Aligned_cols=246  Identities=26%  Similarity=0.329  Sum_probs=197.8

Q ss_pred             ccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeeccccc----CCceEEE
Q 040363          260 LSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCED----HNESFLV  330 (548)
Q Consensus       260 y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~lV  330 (548)
                      |++.++||+|+||.||+|.+ .+++.||+|++...    ...+++.+|+++++.++|||||++++++++    ++..+||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            36778899999999999996 46899999998533    345679999999999999999999999864    3557999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC-CCCEEEEeccCcccccCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA-DFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~-~~~~kL~DFGla~~~~~~  409 (548)
                      |||+++|+|.+++. +.+.+++..+..++.|++.||+|||+++ .+|+||||||+||||+. ++.+||+|||+|+.... 
T Consensus       108 mEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-  184 (290)
T 3fpq_A          108 TELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             EECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             EeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence            99999999999995 4467999999999999999999999643 23999999999999984 78999999999986432 


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                        ......+||+.|||||++.+ +|+.++|||||||++|||+||+.||....    ....+.+.+..+.     ..+.++
T Consensus       185 --~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~-----~~~~~~  252 (290)
T 3fpq_A          185 --SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGV-----KPASFD  252 (290)
T ss_dssp             --TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTC-----CCGGGG
T ss_pred             --CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCC-----CCCCCC
Confidence              23456789999999998865 69999999999999999999999995332    2333333332221     122334


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ...++++.+++.+++   ..||++|||++|+++|
T Consensus       253 ~~~~~~~~~li~~~L---~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          253 KVAIPEVKEIIEGCI---RQNKDERYSIKDLLNH  283 (290)
T ss_dssp             GCCCHHHHHHHHHHS---CSSGGGSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHHc---cCChhHCcCHHHHhcC
Confidence            456777777666655   5589999999999874


No 13 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.2e-49  Score=406.10  Aligned_cols=265  Identities=23%  Similarity=0.340  Sum_probs=206.6

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHH-HHHHHHHhcccCCCCceeeeecccccCC----ceEEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVD-TFVREVRSLSHVQHPNLVALLSYCEDHN----ESFLVYE  332 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~-~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~~lV~E  332 (548)
                      .+|.+.++||+|+||+||+|++ +|+.||||++......+ ....|+..+..++|||||++++++.+++    ..+||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            4688889999999999999998 68999999996554332 3345777778899999999999987654    5799999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhC-----CCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTY-----PEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~-----~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      |+++|+|.+++..  ..+++..+..++.|++.||+|||+.     +..+||||||||+||||+.++++||+|||+++...
T Consensus        82 y~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A           82 YHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             CCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence            9999999999953  4689999999999999999999975     12359999999999999999999999999998876


Q ss_pred             CCCCc---ccccccCCCCccCcccccCC------CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCC----------cHH
Q 040363          408 IGQSY---VSSEVRGTFGYVDPEYRRNH------HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPM----------PLD  468 (548)
Q Consensus       408 ~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~----------~~~  468 (548)
                      .....   ......||+.|||||++.+.      .++.++|||||||++|||+||+.|+....+...          ...
T Consensus       160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~  239 (303)
T 3hmm_A          160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE  239 (303)
T ss_dssp             TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred             CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence            44332   22346799999999998654      478899999999999999999888754332222          223


Q ss_pred             HHHHHHHhcCCcccccCCCCCCC-CCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          469 KMAKFVMRGGNIAKFADPTINGE-YSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       469 ~~~~~~~~~~~~~~~~d~~l~~~-~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      .+.+.+...     ..+|.++.. .+.+..+.+.+++.+|+. ||++||||.||++.|+++.+.
T Consensus       240 ~~~~~~~~~-----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          240 EMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHhcc-----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            333322221     223444332 234667788999999997 799999999999999998764


No 14 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=5.4e-50  Score=416.39  Aligned_cols=266  Identities=25%  Similarity=0.376  Sum_probs=215.9

Q ss_pred             HHHHHhhcCCccceeeeeecCceEEEEEEEcC------CcEEEEEEecCc---chHHHHHHHHHhcccCCC-Cceeeeec
Q 040363          250 IKEVYSATNNLSASNYIGQGVAGKVYKGILSN------GQQVAVKHIISD---GYVDTFVREVRSLSHVQH-PNLVALLS  319 (548)
Q Consensus       250 ~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~------g~~vAvK~i~~~---~~~~~~~~E~~il~~l~h-pnIv~l~~  319 (548)
                      ..+++...++|++.+.||+|+||+||+|.+..      ++.||||++...   ...+.+.+|+.+|.+++| ||||++++
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            34555667899999999999999999998542      368999999643   335678999999999965 89999999


Q ss_pred             ccccC-CceEEEEEecCCCChhHHhhhcc---------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccC
Q 040363          320 YCEDH-NESFLVYELCHNGNLSEWLYGKA---------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIK  383 (548)
Q Consensus       320 ~~~~~-~~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlK  383 (548)
                      +|.+. +..++||||+++|+|.++|....               ..+++.++..++.|+++||+|||+++   |||||||
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK  212 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA  212 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccC
Confidence            98654 56899999999999999996532               34899999999999999999999887   9999999


Q ss_pred             CCCeeEcCCCCEEEEeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCC
Q 040363          384 PTNILINADFQAKLSDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGD  461 (548)
Q Consensus       384 p~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~  461 (548)
                      |+|||++.++.+||+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||+||||+| |+.||....
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999876544333 3345679999999999999999999999999999999998 899996433


Q ss_pred             CCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          462 NRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      .    ...+.+.+..+.      .+..+...++++.    +++.+|+. ||++|||+.||+++|+++++.+.
T Consensus       293 ~----~~~~~~~i~~g~------~~~~p~~~~~~~~----~li~~c~~~dP~~RPt~~eil~~L~~llq~~~  350 (353)
T 4ase_A          293 I----DEEFCRRLKEGT------RMRAPDYTTPEMY----QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  350 (353)
T ss_dssp             C----SHHHHHHHHHTC------CCCCCTTCCHHHH----HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             H----HHHHHHHHHcCC------CCCCCccCCHHHH----HHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence            2    223333333332      2233445566644    45566776 89999999999999999997654


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.2e-48  Score=397.74  Aligned_cols=247  Identities=24%  Similarity=0.373  Sum_probs=181.9

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCC--------
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN--------  325 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--------  325 (548)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++...   ...+.+.+|+.+|+.++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4699999999999999999996 47999999998532   33467899999999999999999999986544        


Q ss_pred             ----ceEEEEEecCCCChhHHhhhccC--cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEe
Q 040363          326 ----ESFLVYELCHNGNLSEWLYGKAG--VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSD  399 (548)
Q Consensus       326 ----~~~lV~E~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~D  399 (548)
                          ..|+||||+++|+|.+++.....  ..++..++.++.|++.||+|||+++   |+||||||+|||++.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999965432  3455678899999999999999887   99999999999999999999999


Q ss_pred             ccCcccccCCCCc-----------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 040363          400 FGLSKVMDIGQSY-----------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLD  468 (548)
Q Consensus       400 FGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~  468 (548)
                      ||+|+.+......           .....+||+.|||||++.+..|+.++|||||||++|||++   ||....    ...
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~  234 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERV  234 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHH
Confidence            9999887543221           1234679999999999999999999999999999999996   663211    111


Q ss_pred             HHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          469 KMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       469 ~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .....+. ...     .|......+++..+++.+|+   ..||++|||+.|++++
T Consensus       235 ~~~~~~~-~~~-----~p~~~~~~~~~~~~li~~~L---~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          235 RTLTDVR-NLK-----FPPLFTQKYPCEYVMVQDML---SPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHHHHH-TTC-----CCHHHHHHCHHHHHHHHHHT---CSSGGGSCCHHHHHTS
T ss_pred             HHHHHHh-cCC-----CCCCCcccCHHHHHHHHHHc---CCChhHCcCHHHHhcC
Confidence            1111111 111     11122223444555554444   4589999999999874


No 16 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.8e-47  Score=399.20  Aligned_cols=259  Identities=22%  Similarity=0.299  Sum_probs=204.6

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCcchHHHHHHHHHhcccC-CCCceeeeecccccCCceEE
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ...++|++.++||+|+||+||+|+.+    +++.||+|++.......++.+|+++|+.+ +|||||++++++.+++..++
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l   97 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI   97 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence            34578999999999999999999853    46899999998777777899999999998 69999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC-CCEEEEeccCcccccC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD-FQAKLSDFGLSKVMDI  408 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~-~~~kL~DFGla~~~~~  408 (548)
                      ||||+++|+|.+++    +.+++.++..++.|++.||+|||+++   |+||||||+|||++.+ +.+||+|||+|+....
T Consensus        98 vmE~~~g~~L~~~~----~~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           98 AMPYLEHESFLDIL----NSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EEECCCCCCHHHHH----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EEeCCCcccHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            99999999999998    35899999999999999999999888   9999999999999877 7999999999986543


Q ss_pred             CCC---------------------------cccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          409 GQS---------------------------YVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       409 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                      ...                           ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            211                           112345799999999998775 5899999999999999999999999655


Q ss_pred             CCCCCcHHHHHHHH----------------------------------HhcC-Cc--------ccccCCCCCCCCCHHHH
Q 040363          461 DNRPMPLDKMAKFV----------------------------------MRGG-NI--------AKFADPTINGEYSVEAF  497 (548)
Q Consensus       461 ~~~~~~~~~~~~~~----------------------------------~~~~-~~--------~~~~d~~l~~~~s~~~~  497 (548)
                      .+....+..+....                                  .... ..        ........+...++++.
T Consensus       251 ~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~  330 (361)
T 4f9c_A          251 SDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAY  330 (361)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHH
T ss_pred             CCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHH
Confidence            43222111111100                                  0000 00        00011122346788999


Q ss_pred             HHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          498 DLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       498 ~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +++.+|+   ..||++|||++|+++|
T Consensus       331 DLl~~lL---~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          331 DLLDKLL---DLNPASRITAEEALLH  353 (361)
T ss_dssp             HHHHHHT---CSCTTTSCCHHHHHTS
T ss_pred             HHHHHHC---cCChhHCcCHHHHhcC
Confidence            9999988   7799999999999864


No 17 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.1e-47  Score=398.37  Aligned_cols=255  Identities=22%  Similarity=0.343  Sum_probs=201.7

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccc------cCC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCE------DHN  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~  325 (548)
                      .++|++.+.||+|+||.||+|++ .+|+.||||++...    ...+++.+|+.+|+.++|||||++++++.      +.+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            36799999999999999999996 57999999999543    33457889999999999999999999865      346


Q ss_pred             ceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ..||||||++ |+|.+++. ..+.+++..+..++.|++.||.|||+++   ||||||||+|||++.++.+||+|||+++.
T Consensus       133 ~~~ivmE~~~-g~L~~~i~-~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIH-SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHT-SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEEeCCC-CCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence            7899999996 68999985 4568999999999999999999999888   99999999999999999999999999987


Q ss_pred             ccCCC---CcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcc
Q 040363          406 MDIGQ---SYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIA  481 (548)
Q Consensus       406 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  481 (548)
                      +....   .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...+.    ...+.......+...
T Consensus       208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~----~~~l~~I~~~~g~p~  283 (398)
T 4b99_A          208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY----VHQLQLIMMVLGTPS  283 (398)
T ss_dssp             C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH----HHHHHHHHHHHCCCC
T ss_pred             cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH----HHHHHHHHHhcCCCC
Confidence            64322   2234567899999999998775 579999999999999999999999964431    222221111111110


Q ss_pred             cc----------------cCC-------CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          482 KF----------------ADP-------TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       482 ~~----------------~d~-------~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..                ..+       .+....++++.++|.+|+   ..||++|||+.|+++|
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL---~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML---RFEPSARISAAAALRH  345 (398)
T ss_dssp             GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHS---CSSTTTSCCHHHHTTS
T ss_pred             hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHC---cCChhHCcCHHHHhcC
Confidence            00                000       112346788888888887   7799999999999875


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=1.4e-45  Score=407.09  Aligned_cols=251  Identities=25%  Similarity=0.343  Sum_probs=212.4

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|++.+.||+|+||.||+|.. .+|+.||+|++...  ...+.+.+|+.+|+.++|||||++++++.+++..++||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            36899999999999999999996 47999999998644  3456789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC--CCEEEEeccCcccccCCCC
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD--FQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~--~~~kL~DFGla~~~~~~~~  411 (548)
                      ++||+|.+++....+.+++.++..++.||+.||.|||+++   |+||||||+|||++.+  +.+||+|||+++.+.... 
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-  311 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-  311 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence            9999999999766778999999999999999999999887   9999999999999854  899999999999876433 


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                       .....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+     .......+....   ...++.....
T Consensus       312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-----~~~~~~~i~~~~---~~~~~~~~~~  382 (573)
T 3uto_A          312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-----DDETLRNVKSCD---WNMDDSAFSG  382 (573)
T ss_dssp             -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTC---CCCCSGGGTT
T ss_pred             -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHhCC---CCCCcccccC
Confidence             2345689999999999999999999999999999999999999996433     233333333221   1122333456


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +++++.++|.+|+   ..||++|||+.|+++|
T Consensus       383 ~s~~~~dli~~~L---~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          383 ISEDGKDFIRKLL---LADPNTRMTIHQALEH  411 (573)
T ss_dssp             SCHHHHHHHHTTS---CSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHc---cCChhHCcCHHHHhcC
Confidence            7888888887776   6699999999999875


No 19 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=5e-45  Score=373.59  Aligned_cols=283  Identities=36%  Similarity=0.605  Sum_probs=240.2

Q ss_pred             cchhhHHHHHhhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcc---hHHHHHHHHHhcccCCCCceeeeeccc
Q 040363          245 CLKIAIKEVYSATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG---YVDTFVREVRSLSHVQHPNLVALLSYC  321 (548)
Q Consensus       245 ~~~~~~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~  321 (548)
                      ...++..++....++|++.+.||+|+||.||+|..++++.||+|++....   ....+.+|+.+++.++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            35667788889999999999999999999999998889999999986542   223689999999999999999999999


Q ss_pred             ccCCceEEEEEecCCCChhHHhhhcc---CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEE
Q 040363          322 EDHNESFLVYELCHNGNLSEWLYGKA---GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLS  398 (548)
Q Consensus       322 ~~~~~~~lV~E~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~  398 (548)
                      ...+..++||||+++++|.+++....   ..+++..+..++.|++.||.|||+....+|+||||||+|||++.++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            99999999999999999999996533   348999999999999999999998822239999999999999999999999


Q ss_pred             eccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCC---CCCCCcHHHHHHHHH
Q 040363          399 DFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLG---DNRPMPLDKMAKFVM  475 (548)
Q Consensus       399 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~---~~~~~~~~~~~~~~~  475 (548)
                      |||+++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||...   .........+.+...
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (326)
T 3uim_A          177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL  256 (326)
T ss_dssp             CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred             cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence            99999987655555556677999999999999989999999999999999999999999521   223333444444444


Q ss_pred             hcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHh
Q 040363          476 RGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKA  527 (548)
Q Consensus       476 ~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~  527 (548)
                      .........+..+...++.+..+.+.+++.+|+. +|++|||+.||+++|++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            4556677777777888888888899999999987 799999999999999873


No 20 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.1e-44  Score=370.83  Aligned_cols=279  Identities=39%  Similarity=0.670  Sum_probs=236.8

Q ss_pred             HHHHHhhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          250 IKEVYSATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       250 ~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      ..++...+++|++.+.||+|+||.||+|..++++.||+|++...  ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            33445677899999999999999999999888999999988543  4457899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc---CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          328 FLVYELCHNGNLSEWLYGKA---GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ++||||+++++|.+++....   ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999999999985443   35899999999999999999999877   9999999999999999999999999998


Q ss_pred             cccCCC-CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCC-CcHHHHHHHHHhcCCccc
Q 040363          405 VMDIGQ-SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRP-MPLDKMAKFVMRGGNIAK  482 (548)
Q Consensus       405 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~  482 (548)
                      ...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||....... .....+.......+.+..
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (321)
T 2qkw_B          188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ  267 (321)
T ss_dssp             ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence            754322 223344568999999999998999999999999999999999999997554332 233333334445566777


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          483 FADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       483 ~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      ..++.+....+++....+..++.+|+. ||++|||+.|++++|+.+++..
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            778887778888888889999999987 7999999999999999998654


No 21 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=3.3e-45  Score=404.43  Aligned_cols=248  Identities=23%  Similarity=0.303  Sum_probs=205.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHH---HHHHhcccCCCCceeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFV---REVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~---~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      .++|++.++||+|+||.||+|+. .+|+.||||++...     .....+.   +++.+++.++|||||+++++|.+.+..
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            36899999999999999999996 46999999998432     2222333   346777788999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      |+||||++||+|.++|. +.+.+++..++.++.||+.||.|||+++   ||||||||+||||+.+|++||+|||+|+.+.
T Consensus       268 ylVmEy~~GGdL~~~l~-~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  343 (689)
T ss_dssp             EEEECCCCSCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence            99999999999999995 4467999999999999999999999777   9999999999999999999999999998765


Q ss_pred             CCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ...   ....+||+.|||||++.. ..|+.++|||||||++|||++|+.||......  ....+.+.+...       .+
T Consensus       344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i~~~i~~~-------~~  411 (689)
T 3v5w_A          344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTM-------AV  411 (689)
T ss_dssp             SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHHHHHHHHC-------CC
T ss_pred             CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCC-------CC
Confidence            332   345789999999999864 58999999999999999999999999643322  222333332221       24


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCCC-----HHHHHHH
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRPS-----MEQVVLR  523 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT-----~~evl~~  523 (548)
                      .++..+++++.++|.+|+   ..||++|++     ++||++|
T Consensus       412 ~~p~~~S~~a~dLI~~lL---~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          412 ELPDSFSPELRSLLEGLL---QRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             CCCTTSCHHHHHHHHHHT---CSCGGGCTTCSSSTHHHHTTS
T ss_pred             CCCccCCHHHHHHHHHHc---cCCHhHCCCCCCCCHHHHhcC
Confidence            456678999999999888   779999998     7888765


No 22 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.3e-43  Score=349.42  Aligned_cols=257  Identities=24%  Similarity=0.367  Sum_probs=215.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCH  335 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  335 (548)
                      .++|++.+.||+|+||.||++...+++.||+|++... ...+.+.+|+.++++++||||+++++++.+++..++||||++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            4689999999999999999999888999999999654 345679999999999999999999999999999999999999


Q ss_pred             CCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccc
Q 040363          336 NGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSS  415 (548)
Q Consensus       336 ~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  415 (548)
                      +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++...........
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            99999999777778999999999999999999999887   999999999999999999999999999876543333334


Q ss_pred             cccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          416 EVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       416 ~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     .......+...      ..+..+...++
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~  234 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTG------FRLYKPRLAST  234 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTT------CCCCCCTTSCH
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHhcC------ccCCCCCcCCH
Confidence            4567889999999999999999999999999999999 999985432     33333333322      12233344566


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhh
Q 040363          495 EAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~  530 (548)
                      +..+++.+|+   ..+|++|||++|++++|+++.+.
T Consensus       235 ~~~~li~~~l---~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          235 HVYQIMNHCW---RERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHc---cCCcccCcCHHHHHHHHHHHHHc
Confidence            6655555554   45899999999999999999864


No 23 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=6.9e-43  Score=355.42  Aligned_cols=260  Identities=23%  Similarity=0.360  Sum_probs=210.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC--cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS--DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|.+.++||+|+||.||++.. .+++.||+|++..  ....+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            36899999999999999999996 4689999998854  34456899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      +++++|.+++......+++.++..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.........
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  165 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP  165 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence            9999999999776778999999999999999999999887   9999999999999999999999999998765332211


Q ss_pred             -------------cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCc
Q 040363          414 -------------SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNI  480 (548)
Q Consensus       414 -------------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~  480 (548)
                                   .....||+.|+|||++.+..++.++||||||+++|||++|..|+.................      
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~------  239 (310)
T 3s95_A          166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF------  239 (310)
T ss_dssp             --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH------
T ss_pred             cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc------
Confidence                         1246799999999999999999999999999999999999999865433222111101110      


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          481 AKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       481 ~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                         .+...+..++++..+    ++.+|+. ||++|||+.++++.|+++.....
T Consensus       240 ---~~~~~~~~~~~~l~~----li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~  285 (310)
T 3s95_A          240 ---LDRYCPPNCPPSFFP----ITVRCCDLDPEKRPSFVKLEHWLETLRMHLA  285 (310)
T ss_dssp             ---HHHTCCTTCCTTHHH----HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ---ccccCCCCCCHHHHH----HHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence               111223345555555    4455555 89999999999999999876543


No 24 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=5.1e-43  Score=348.41  Aligned_cols=257  Identities=25%  Similarity=0.375  Sum_probs=212.8

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCH  335 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  335 (548)
                      .++|++.+.||+|+||.||++..+++..||+|++... ...+++.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            4689999999999999999999988889999999654 345679999999999999999999999999999999999999


Q ss_pred             CCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccc
Q 040363          336 NGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSS  415 (548)
Q Consensus       336 ~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  415 (548)
                      +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++............
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  163 (268)
T 3sxs_A           87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV  163 (268)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence            99999999776677999999999999999999999887   999999999999999999999999999877654444444


Q ss_pred             cccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          416 EVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       416 ~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     ............      ....+...++
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~  232 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----NSEVVLKVSQGH------RLYRPHLASD  232 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTC------CCCCCTTSCH
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-----hHHHHHHHHcCC------CCCCCCcChH
Confidence            4567888999999999899999999999999999999 999985333     222222222221      1122233455


Q ss_pred             HHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          495 EAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      +..+    ++..|+. +|++|||+.|++++|+.+.+..
T Consensus       233 ~l~~----li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          233 TIYQ----IMYSCWHELPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             HHHH----HHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred             HHHH----HHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence            5444    5555555 8999999999999999987654


No 25 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=2.1e-42  Score=348.68  Aligned_cols=276  Identities=17%  Similarity=0.166  Sum_probs=223.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++......+.+.+|+.+++.+ +|+|++++++++.+....++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            46899999999999999999995 679999999987666666788999999999 7999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC-----EEEEeccCcccccCC
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ-----AKLSDFGLSKVMDIG  409 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~-----~kL~DFGla~~~~~~  409 (548)
                       +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.     +||+|||+++.....
T Consensus        89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence             99999999766667999999999999999999999777   999999999999988776     999999999877543


Q ss_pred             CCc------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          410 QSY------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       410 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      ...      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......  .......+.....  ..
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~--~~  240 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT--NKQKYERIGEKKQ--ST  240 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC--HHHHHHHHHHHHH--HS
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc--cHHHHHHHHhhcc--Cc
Confidence            321      2345679999999999999999999999999999999999999997543221  1222211111100  01


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCcccccc
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRSHRNC  543 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~~~~  543 (548)
                      ..+.+...++++..+++.+++   ..+|++|||+++|++.|+++++...........|+.
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l---~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~  297 (298)
T 1csn_A          241 PLRELCAGFPEEFYKYMHYAR---NLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL  297 (298)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHH---HCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGGC
T ss_pred             cHHHHHhhCcHHHHHHHHHHh---cCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccCC
Confidence            112223356777666665555   568999999999999999999888777777777764


No 26 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.5e-42  Score=357.50  Aligned_cols=246  Identities=26%  Similarity=0.396  Sum_probs=208.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||+|.+ .+|+.||+|++...    ...+++.+|+.+++.++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            47899999999999999999996 67999999998543    34567889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++++|.+++.. .+.+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++....... 
T Consensus        94 e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  168 (328)
T 3fe3_A           94 EYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-  168 (328)
T ss_dssp             CCCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred             ECCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence            99999999999954 357999999999999999999999887   9999999999999999999999999998765332 


Q ss_pred             cccccccCCCCccCcccccCCCCC-ccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVS-TSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~-~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                       ......||+.|+|||++.+..++ .++||||||+++|||++|+.||...+     ...+...+..+.       ..++.
T Consensus       169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~-------~~~p~  235 (328)
T 3fe3_A          169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVLRGK-------YRIPF  235 (328)
T ss_dssp             -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC-------CCCCT
T ss_pred             -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC-------CCCCC
Confidence             33556899999999999888775 89999999999999999999996432     334444333321       23344


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..++++.+++.+|+   ..||.+|||++|++++
T Consensus       236 ~~s~~~~~li~~~L---~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          236 YMSTDCENLLKRFL---VLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             TSCHHHHHHHHHHC---CSSTTTSCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHC---CCChhHCcCHHHHhcC
Confidence            56888888777776   6699999999999875


No 27 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=3.3e-43  Score=352.60  Aligned_cols=256  Identities=23%  Similarity=0.333  Sum_probs=210.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCH  335 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  335 (548)
                      .++|++.+.||+|+||.||++...++..||+|++... ...+++.+|+++++.++||||+++++++.+.+..++||||++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  102 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA  102 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence            4689999999999999999999988899999999654 345689999999999999999999999999999999999999


Q ss_pred             CCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccc
Q 040363          336 NGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSS  415 (548)
Q Consensus       336 ~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  415 (548)
                      +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++............
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (283)
T 3gen_A          103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  179 (283)
T ss_dssp             TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence            99999999766678999999999999999999999887   999999999999999999999999999876543333334


Q ss_pred             cccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          416 EVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       416 ~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     .......+...      .....+...++
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~  248 (283)
T 3gen_A          180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQG------LRLYRPHLASE  248 (283)
T ss_dssp             STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTT------CCCCCCTTCCH
T ss_pred             CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-----hhHHHHHHhcc------cCCCCCCcCCH
Confidence            4557889999999998899999999999999999998 999985433     23333333322      12222334455


Q ss_pred             HHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          495 EAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      +..+    ++.+|+. +|++|||++|++++|+++++.
T Consensus       249 ~l~~----li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          249 KVYT----IMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHHH----HHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHH----HHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            5444    5555555 899999999999999999865


No 28 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=9.1e-42  Score=346.14  Aligned_cols=277  Identities=32%  Similarity=0.535  Sum_probs=224.1

Q ss_pred             chhhHHHHHhhcCCccce------eeeeecCceEEEEEEEcCCcEEEEEEecCc------chHHHHHHHHHhcccCCCCc
Q 040363          246 LKIAIKEVYSATNNLSAS------NYIGQGVAGKVYKGILSNGQQVAVKHIISD------GYVDTFVREVRSLSHVQHPN  313 (548)
Q Consensus       246 ~~~~~~e~~~~~~~y~~~------~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~------~~~~~~~~E~~il~~l~hpn  313 (548)
                      ..+...++...+++|...      +.||+|+||.||+|.. +++.||+|++...      ...+.+.+|+.+++.++|||
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   91 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN   91 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred             CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence            556777888888888877      9999999999999987 6889999998532      33568899999999999999


Q ss_pred             eeeeecccccCCceEEEEEecCCCChhHHhhhc--cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC
Q 040363          314 LVALLSYCEDHNESFLVYELCHNGNLSEWLYGK--AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA  391 (548)
Q Consensus       314 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~  391 (548)
                      |+++++++.+.+..++||||+++++|.+++...  ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~  168 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDE  168 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECT
T ss_pred             eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcC
Confidence            999999999999999999999999999998543  346899999999999999999999887   999999999999999


Q ss_pred             CCCEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 040363          392 DFQAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKM  470 (548)
Q Consensus       392 ~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~  470 (548)
                      ++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||........ ...+
T Consensus       169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~  246 (307)
T 2nru_A          169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDI  246 (307)
T ss_dssp             TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHH
T ss_pred             CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHH
Confidence            99999999999987654322 22344679999999998765 589999999999999999999999975543332 2233


Q ss_pred             HHHHHh-cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhh
Q 040363          471 AKFVMR-GGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALD  529 (548)
Q Consensus       471 ~~~~~~-~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~  529 (548)
                      .+.... ...+....++.+ ...+....+.+.+++..|+. +|.+|||+.+++++|+++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          247 KEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            222222 222333334333 23456667778888888887 79999999999999998753


No 29 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.2e-42  Score=361.03  Aligned_cols=249  Identities=23%  Similarity=0.341  Sum_probs=201.0

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc---hHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG---YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ..++|++.+.||+|+||.||+|.. .+|+.||||++....   ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~   87 (347)
T 3zgw_A            8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL   87 (347)
T ss_dssp             TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence            357899999999999999999995 579999999985432   3457899999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++++|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++........
T Consensus        88 E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  163 (347)
T 3zgw_A           88 EYCPGGELFDYIIS-QDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD  163 (347)
T ss_dssp             ECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred             eCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence            99999999999954 457999999999999999999999887   99999999999999999999999999987654444


Q ss_pred             cccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      .......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...     ......+.+..+       ...++.
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~-------~~~~p~  231 (347)
T 3zgw_A          164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----NVMALYKKIMRG-------KYDVPK  231 (347)
T ss_dssp             --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHT-------CCCCCT
T ss_pred             ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcC-------CCCCCC
Confidence            44456689999999999988775 89999999999999999999999643     233333333332       123445


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++++..+++.+|+   ..||++|||++|++++
T Consensus       232 ~~s~~~~~li~~~L---~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          232 WLSPSSILLLQQML---QVDPKKRISMKNLLNH  261 (347)
T ss_dssp             TCCHHHHHHHHHHT---CSSGGGSCCHHHHHTC
T ss_pred             CCCHHHHHHHHHHc---ccCHhHCcCHHHHhcC
Confidence            67888888777776   6699999999999975


No 30 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.8e-42  Score=350.48  Aligned_cols=268  Identities=24%  Similarity=0.376  Sum_probs=209.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC-----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS-----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||++.. .+++.||+|.+..     ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            46899999999999999999995 4689999998832     23346789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++......
T Consensus        90 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred             EeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence            999999999999954 457899999999999999999999887   9999999999999999999999999998776444


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      ........||+.|+|||.+.+..++.++||||||+++|||++|+.||....    ......+.. .. ... ........
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~-~~-~~~-~~~~~~~~  238 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET----AVSIAIKHI-QD-SVP-NVTTDVRK  238 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC----HHHHHHHHH-SS-CCC-CHHHHSCT
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHh-hc-cCC-Ccchhccc
Confidence            444455679999999999999999999999999999999999999996432    122222211 11 111 11122344


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCC-CHHHHHHHHHHhhhhhcCCCCCc
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRP-SMEQVVLRLEKALDISKTSNSYR  538 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RP-T~~evl~~L~~~l~~~~~~~~~~  538 (548)
                      .+++...+++.+++   ..||++|| +++++.+.|+.++..........
T Consensus       239 ~~~~~l~~li~~~l---~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~  284 (294)
T 4eqm_A          239 DIPQSLSNVILRAT---EKDKANRYKTIQEMKDDLSSVLHENRANEDVY  284 (294)
T ss_dssp             TSCHHHHHHHHHHS---CSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCC
T ss_pred             CCCHHHHHHHHHHh---cCCHhHccccHHHHHHHHHHHHhhccCCcchh
Confidence            56666666555554   45899998 99999999999887666555443


No 31 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=4e-42  Score=359.96  Aligned_cols=259  Identities=22%  Similarity=0.404  Sum_probs=210.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc--------CCcEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS--------NGQQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDH  324 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~  324 (548)
                      .++|++.+.||+|+||.||+|...        ++..||+|++...   ...+.+.+|+.+++.+ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            468999999999999999999852        3567999998643   3356789999999999 899999999999999


Q ss_pred             CceEEEEEecCCCChhHHhhhcc---------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE
Q 040363          325 NESFLVYELCHNGNLSEWLYGKA---------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl  389 (548)
                      +..++||||+++|+|.+++....               ..+++..++.++.|++.||.|||+.+   |+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence            99999999999999999996543               35789999999999999999999887   9999999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcH
Q 040363          390 NADFQAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPL  467 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~  467 (548)
                      +.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....     .
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-----~  311 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V  311 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----G
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----H
Confidence            9999999999999987654332 22334567889999999999999999999999999999999 999986433     2


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ..+...+..+.      .+..+..++.+..+    ++..|+. +|++|||+.|++++|++++.....
T Consensus       312 ~~~~~~~~~~~------~~~~~~~~~~~l~~----li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~  368 (370)
T 2psq_A          312 EELFKLLKEGH------RMDKPANCTNELYM----MMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  368 (370)
T ss_dssp             GGHHHHHHTTC------CCCCCTTSCHHHHH----HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHhcCC------CCCCCCCCCHHHHH----HHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence            22333333221      12334455666555    4555555 899999999999999999976654


No 32 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=5.1e-42  Score=352.48  Aligned_cols=260  Identities=23%  Similarity=0.369  Sum_probs=209.7

Q ss_pred             cCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+|...    .+..||||++...   ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            368999999999999999999963    3456999999643   345678999999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence            99999999999999777678999999999999999999999887   999999999999999999999999999876543


Q ss_pred             CCc--ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          410 QSY--VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       410 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ...  ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....     .......+....      ..
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~------~~  273 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-----NRDVISSVEEGY------RL  273 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-----HHHHHHHHHTTC------CC
T ss_pred             ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHcCC------CC
Confidence            222  2233456788999999999999999999999999999999 999985432     333333333321      22


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ..+..++++..+++.+++   ..||++|||+.||++.|+.+++....
T Consensus       274 ~~~~~~~~~l~~li~~~l---~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          274 PAPMGCPHALHQLMLDCW---HKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             CCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             CCCCCcCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHhCccc
Confidence            233456666555444443   44899999999999999999876544


No 33 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.9e-42  Score=354.96  Aligned_cols=267  Identities=25%  Similarity=0.337  Sum_probs=207.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcc-hHHHHHHHHHhcccCCCCceeeeecccccCC----ceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG-YVDTFVREVRSLSHVQHPNLVALLSYCEDHN----ESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~~lV~  331 (548)
                      .++|++.++||+|+||.||+|.. .++.||||++.... ......+|+.+++.++||||+++++++....    ..++||
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEE-CCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            46899999999999999999987 47999999986443 3445677999999999999999999987654    369999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhC-------CCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTY-------PEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~-------~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ||+++|+|.+++..  ..+++..++.++.|++.||.|||+.       +..+|+||||||+|||++.++.+||+|||+++
T Consensus       102 e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          102 AFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             ECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence            99999999999944  4599999999999999999999976       00039999999999999999999999999998


Q ss_pred             cccCCCCc-ccccccCCCCccCcccccC-----CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCC-----------cH
Q 040363          405 VMDIGQSY-VSSEVRGTFGYVDPEYRRN-----HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPM-----------PL  467 (548)
Q Consensus       405 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~-----------~~  467 (548)
                      ........ ......||+.|+|||++.+     ..++.++||||||+++|||++|+.||....+...           ..
T Consensus       180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence            76544322 2334679999999999876     4667889999999999999999999975543221           11


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCC-CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEY-SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~-s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      ..+.......     ...+.+.... +....+.+.+++.+|+. ||++|||+.||++.|+++.+..
T Consensus       260 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~  320 (322)
T 3soc_A          260 EDMQEVVVHK-----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT  320 (322)
T ss_dssp             HHHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hhhhhhhhcc-----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            2222222111     1112222111 12344557777778877 8999999999999999987654


No 34 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=4.5e-42  Score=348.34  Aligned_cols=249  Identities=24%  Similarity=0.349  Sum_probs=204.0

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC--cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS--DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++..  ....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            36899999999999999999995 5799999999843  23456789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      +++++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++........ .
T Consensus        99 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  172 (297)
T 3fxz_A           99 LAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K  172 (297)
T ss_dssp             CTTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred             CCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence            999999999944  46899999999999999999999887   99999999999999999999999999987654332 2


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYS  493 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s  493 (548)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||....    ........... ..    .....+..++
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~-~~----~~~~~~~~~~  243 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN----PLRALYLIATN-GT----PELQNPEKLS  243 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHHHH-CS----CCCSCGGGSC
T ss_pred             cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhC-CC----CCCCCccccC
Confidence            345679999999999999999999999999999999999999995432    22222222211 11    1112234566


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          494 VEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       494 ~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+..+++.+|+   ..||++|||+.|++++
T Consensus       244 ~~~~~li~~~l---~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          244 AIFRDFLNRCL---EMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHHHHHHHHS---CSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHHHHc---cCChhHCcCHHHHhhC
Confidence            66666555554   4589999999999874


No 35 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=3.1e-42  Score=347.97  Aligned_cols=259  Identities=24%  Similarity=0.346  Sum_probs=204.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhccc--CCCCceeeeeccccc----CCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSH--VQHPNLVALLSYCED----HNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~----~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|.. +++.||||++... ..+.+.+|.+++..  ++||||+++++++..    ....++|
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            46899999999999999999988 7899999998654 33455666666665  799999999998543    3567999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhh--------hCCCCceEecccCCCCeeEcCCCCEEEEeccC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLH--------TYPEGCIIHRDIKPTNILINADFQAKLSDFGL  402 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGl  402 (548)
                      |||+++|+|.+++.  ...+++..++.++.|++.||.|||        +.+   |+||||||+|||++.++.+||+|||+
T Consensus        85 ~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           85 THYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             ECCCTTCBHHHHHT--TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             hhhccCCCHHHHHh--hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCC
Confidence            99999999999993  457999999999999999999999        666   99999999999999999999999999


Q ss_pred             cccccCCCCcc---cccccCCCCccCcccccCC------CCCccccHHHHHHHHHHHHcC----------CCCCCCCCCC
Q 040363          403 SKVMDIGQSYV---SSEVRGTFGYVDPEYRRNH------HVSTSGDVYSFGVVLLQLLSG----------QRVINLGDNR  463 (548)
Q Consensus       403 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~eLltG----------~~pf~~~~~~  463 (548)
                      ++.........   .....||+.|+|||++.+.      .++.++||||||+++|||++|          +.||......
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            98765433321   2345799999999998876      566899999999999999999          7777655444


Q ss_pred             CCcHHHHHHHHHhcCCcccccCCCCCC-CCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHh
Q 040363          464 PMPLDKMAKFVMRGGNIAKFADPTING-EYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKA  527 (548)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~  527 (548)
                      ......+..........     +.++. ..+....+.+.+++..|+. ||++|||+.||++.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQR-----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHHHHHHHHTTSCCC-----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhhHHHhccCCC-----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            44444444433222221     12211 1233455667778888877 799999999999999875


No 36 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=9.1e-42  Score=348.29  Aligned_cols=263  Identities=26%  Similarity=0.358  Sum_probs=201.4

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      ...++|++.+.||+|+||.||+|.. +++.||+|++...    ...+++.+|+.++++++||||+++++++.+.+..++|
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3457899999999999999999987 6889999998543    3345788999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhcc--CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          331 YELCHNGNLSEWLYGKA--GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~--~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      |||+++++|.+++....  ..+++..++.++.|++.||+|||+.+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            99999999999995432  24899999999999999999999532 1299999999999999999999999999986543


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      . ........||+.|+|||.+.+..++.++||||||+++|||++|+.||....     ............     ....+
T Consensus       192 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~-----~~~~~  260 (309)
T 3p86_A          192 T-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-----PAQVVAAVGFKC-----KRLEI  260 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHHSC-----CCCCC
T ss_pred             c-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcC-----CCCCC
Confidence            2 222344679999999999999999999999999999999999999996432     222222222111     12334


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      +..++++..+++.+++   ..+|++|||+.|+++.|+.+++....
T Consensus       261 ~~~~~~~l~~li~~~l---~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          261 PRNLNPQVAAIIEGCW---TNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             CTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             CccCCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHHhCCC
Confidence            4566777666555544   45899999999999999999876443


No 37 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1e-41  Score=352.69  Aligned_cols=247  Identities=24%  Similarity=0.318  Sum_probs=209.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||++..+ +|+.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            368999999999999999999964 6899999998543     3456789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++|+|.+++. ..+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..... 
T Consensus        84 ~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  158 (337)
T 1o6l_A           84 MEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-  158 (337)
T ss_dssp             EECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred             EeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence            99999999999985 3467899999999999999999999887   999999999999999999999999999864322 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      ........||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+...       ...++.
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~-------~~~~p~  226 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILME-------EIRFPR  226 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCCCT
T ss_pred             CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----HHHHHHHHHcC-------CCCCCC
Confidence            223445789999999999999999999999999999999999999996432     23333333322       123445


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCC-----CHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRP-----SMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RP-----T~~evl~~  523 (548)
                      .+++++.+++.+|+   ..||++||     +++|+++|
T Consensus       227 ~~s~~~~~li~~lL---~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          227 TLSPEAKSLLAGLL---KKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             TSCHHHHHHHHHHT---CSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCHHHHHHHHHHh---hcCHHHhcCCCCCCHHHHHcC
Confidence            67888888887776   67999999     99999876


No 38 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=8.5e-42  Score=338.84  Aligned_cols=257  Identities=24%  Similarity=0.354  Sum_probs=213.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCH  335 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  335 (548)
                      .++|++.+.||+|+||.||++...+++.||+|.+... ...+.+.+|+++++.++||||+++++++.+++..++||||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            4689999999999999999999888999999999654 345689999999999999999999999999999999999999


Q ss_pred             CCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccc
Q 040363          336 NGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSS  415 (548)
Q Consensus       336 ~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  415 (548)
                      +++|.+++......+++..++.++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++............
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  163 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence            99999999776677999999999999999999999877   999999999999999999999999999876533222333


Q ss_pred             cccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          416 EVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       416 ~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     .......+....      .+..+...+.
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~i~~~~------~~~~~~~~~~  232 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGF------RLYKPRLAST  232 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTC------CCCCCTTSCH
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC-----HHHHHHHHhcCC------cCCCCccCcH
Confidence            4567889999999998899999999999999999999 899985432     233333333221      1222334566


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhh
Q 040363          495 EAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~  530 (548)
                      +..+++.+|+   ..+|++|||+.+++++|+++.+.
T Consensus       233 ~l~~li~~~l---~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          233 HVYQIMNHCW---RERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHhc
Confidence            6555554444   44899999999999999998764


No 39 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=6.4e-42  Score=357.45  Aligned_cols=250  Identities=26%  Similarity=0.313  Sum_probs=208.2

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc--------hHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG--------YVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~--------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      .++|++.+.||+|+||.||++..+ +|+.||+|.+....        ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            468999999999999999999964 68999999985332        246789999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC----CEEEEeccCc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF----QAKLSDFGLS  403 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~----~~kL~DFGla  403 (548)
                      ++||||+++|+|.+++. ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++    .+||+|||++
T Consensus        91 ~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           91 VLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEECCCSCBHHHHHT-TCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            99999999999999994 4467999999999999999999999887   99999999999998877    7999999999


Q ss_pred             ccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          404 KVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       404 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      .......  ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...+     .......+....   ..
T Consensus       167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~~~---~~  236 (361)
T 2yab_A          167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITAVS---YD  236 (361)
T ss_dssp             EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTC---CC
T ss_pred             eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcC---CC
Confidence            8765432  2345679999999999999999999999999999999999999996432     223333333221   11


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++..+..+++++.+++.+|+   ..||++|||+.|+++|
T Consensus       237 ~~~~~~~~~s~~~~~li~~~L---~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          237 FDEEFFSQTSELAKDFIRKLL---VKETRKRLTIQEALRH  273 (361)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHS---CSSTTTSCCHHHHHTS
T ss_pred             CCchhccCCCHHHHHHHHHHC---CCChhHCcCHHHHhcC
Confidence            222333567888888887777   6699999999999863


No 40 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=6.5e-42  Score=349.43  Aligned_cols=258  Identities=26%  Similarity=0.346  Sum_probs=204.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|++.++||+|+||.||+|...+++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            4789999999999999999999988999999998533    234678899999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~  412 (548)
                      |+++ +|.+++......+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....... 
T Consensus       100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-  174 (311)
T 3niz_A          100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-  174 (311)
T ss_dssp             CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred             CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence            9975 888888766677999999999999999999999877   99999999999999999999999999987653322 


Q ss_pred             ccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC--ccc-------
Q 040363          413 VSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN--IAK-------  482 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~-------  482 (548)
                      ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...... .....+.........  +..       
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-THHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHHCCCChHHhhhhhccchh
Confidence            2334578999999998876 56899999999999999999999999654432 222222221111000  000       


Q ss_pred             ------ccC----CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          483 ------FAD----PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       483 ------~~d----~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                            ...    ..+...+++++.+++.+|+   ..||++|||++|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNML---CFDPNKRISARDAMNH  301 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHS---CSCTTTSCCHHHHHTS
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHc---CCChhHCCCHHHHhcC
Confidence                  000    0112346677777777766   6699999999999874


No 41 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.9e-42  Score=357.58  Aligned_cols=267  Identities=24%  Similarity=0.369  Sum_probs=212.8

Q ss_pred             hHHHHHhhcCCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeee
Q 040363          249 AIKEVYSATNNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALL  318 (548)
Q Consensus       249 ~~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~  318 (548)
                      ...++....++|++.+.||+|+||.||+|.+      .+++.||||++...   ...+.+.+|++++..+ +||||++++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            3445555678999999999999999999983      24679999999653   2345789999999999 799999999


Q ss_pred             cccccCCc-eEEEEEecCCCChhHHhhhccC-------------------------------------------------
Q 040363          319 SYCEDHNE-SFLVYELCHNGNLSEWLYGKAG-------------------------------------------------  348 (548)
Q Consensus       319 ~~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~-------------------------------------------------  348 (548)
                      +++.+.+. .++||||+++|+|.+++.....                                                 
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            99877554 8999999999999999965432                                                 


Q ss_pred             ----------------cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC-
Q 040363          349 ----------------VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS-  411 (548)
Q Consensus       349 ----------------~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~-  411 (548)
                                      .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....... 
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence                            1889999999999999999999887   99999999999999999999999999987643332 


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      .......||+.|+|||++.+..++.++||||||+++|||++ |+.||......    ......+....      .+..+.
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~------~~~~~~  319 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT------RMRAPD  319 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHHTC------CCCCCT
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh----HHHHHHHHcCC------CCCCCC
Confidence            23344678999999999999999999999999999999998 99999644322    22222222221      223344


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhh
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      .++++..+++.+|+   ..+|++|||+.|++++|+++++..
T Consensus       320 ~~~~~l~~li~~~l---~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          320 YTTPEMYQTMLDCW---HGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             TCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHc---cCChhhCCCHHHHHHHHHHHHHHh
Confidence            56777666555544   458999999999999999998754


No 42 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=7.8e-42  Score=351.19  Aligned_cols=268  Identities=17%  Similarity=0.142  Sum_probs=212.3

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||||.+......+.+.+|+.+++.+ +||||+++++++...+..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            46899999999999999999995 579999999987665556789999999999 9999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC-----EEEEeccCcccccCC
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ-----AKLSDFGLSKVMDIG  409 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~-----~kL~DFGla~~~~~~  409 (548)
                       +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.     +||+|||+++.....
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence             99999999766678999999999999999999999887   999999999999999887     999999999876543


Q ss_pred             CCc------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          410 QSY------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       410 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      ...      ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....  .........+..... . .
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~~-~-~  239 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA--DTLKERYQKIGDTKR-A-T  239 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--SSHHHHHHHHHHHHH-H-S
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc--ccHHHHHHHHHhhhc-c-C
Confidence            321      12456799999999999999999999999999999999999999975432  222222222211100 0 0


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCC
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNS  536 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~  536 (548)
                      ....+....+ +..+++.+++   ..+|.+||++++|++.|+++++.......
T Consensus       240 ~~~~~~~~~p-~~~~li~~~l---~~~p~~RP~~~~l~~~l~~~~~~~~~~~~  288 (330)
T 2izr_A          240 PIEVLCENFP-EMATYLRYVR---RLDFFEKPDYDYLRKLFTDLFDRKGYMFD  288 (330)
T ss_dssp             CHHHHTTTCH-HHHHHHHHHH---HCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred             CHHHHhccCh-HHHHHHHHHH---hCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            0011111223 4444444443   44899999999999999999876544433


No 43 
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=3.6e-41  Score=339.38  Aligned_cols=275  Identities=19%  Similarity=0.209  Sum_probs=221.3

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccc-ccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYC-EDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++......+.+.+|+.+++.++|++++..+..+ .+.+..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            47899999999999999999996 679999999987666666799999999999988766655554 5667789999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCcccccCCCC
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~~~~~  411 (548)
                       +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||+   +.++.+||+|||++........
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence             89999999766678999999999999999999999887   9999999999999   4788999999999987664433


Q ss_pred             c------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCC--CcHHHHHHHHHhcCCcccc
Q 040363          412 Y------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRP--MPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       412 ~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~  483 (548)
                      .      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......  .....+......      .
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------~  237 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS------T  237 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH------S
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC------C
Confidence            1      1345679999999999999999999999999999999999999997543221  222222221111      0


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCccccccC
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRSHRNCI  544 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~~~~~  544 (548)
                      ..+.+...++++..+++.+++   ..+|++|||+.++++.|++++...........+|+.+
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 3uzp_A          238 PIEVLCKGYPSEFATYLNFCR---SLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHH---TSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGGC
T ss_pred             chHHHHhhCCHHHHHHHHHHH---hcCcCcCCCHHHHHHHHHHHHHhcCCccccccccccc
Confidence            111223456777666665555   5589999999999999999999888877777777754


No 44 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=3.5e-41  Score=344.47  Aligned_cols=266  Identities=23%  Similarity=0.298  Sum_probs=212.2

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCC--ceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN--ESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lV~  331 (548)
                      ++|++.++||+|+||.||+|... +++.||||++...   ...+.+.+|+++++.++||||+++++++...+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            67999999999999999999964 5899999998643   33567889999999999999999999987655  779999


Q ss_pred             EecCCCChhHHhhhccC--cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE----cCCCCEEEEeccCccc
Q 040363          332 ELCHNGNLSEWLYGKAG--VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI----NADFQAKLSDFGLSKV  405 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl----~~~~~~kL~DFGla~~  405 (548)
                      ||+++++|.+++.....  .+++..++.++.|++.||.|||+.+   |+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            99999999999965433  3899999999999999999999887   9999999999999    7788899999999987


Q ss_pred             ccCCCCcccccccCCCCccCccccc--------CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRR--------NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG  477 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~  477 (548)
                      ......  .....||+.|+|||++.        +..++.++||||||+++|||++|+.||............+.+.....
T Consensus       166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence            654332  23457999999999876        57889999999999999999999999975544443344443333221


Q ss_pred             CC--ccc-----------ccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhh
Q 040363          478 GN--IAK-----------FADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKAL  528 (548)
Q Consensus       478 ~~--~~~-----------~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l  528 (548)
                      ..  +..           .........++....+.+..++..|+. ||++|||++|++++.++..
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            10  000           001112234566777778888888877 8999999999999998643


No 45 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.1e-42  Score=369.77  Aligned_cols=263  Identities=22%  Similarity=0.252  Sum_probs=215.1

Q ss_pred             hhHHHHHhhcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc-----hHHHHHHHHHhcccCCCCceeeeeccc
Q 040363          248 IAIKEVYSATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG-----YVDTFVREVRSLSHVQHPNLVALLSYC  321 (548)
Q Consensus       248 ~~~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~-----~~~~~~~E~~il~~l~hpnIv~l~~~~  321 (548)
                      ....+.....++|++.++||+|+||+||+|+.+ +++.||+|++....     ..+.+.+|..++..++||||+++++++
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            344556667789999999999999999999975 58899999985432     223488999999999999999999999


Q ss_pred             ccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEecc
Q 040363          322 EDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFG  401 (548)
Q Consensus       322 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFG  401 (548)
                      .+.+..++||||+++|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence            9999999999999999999999765678999999999999999999999887   9999999999999999999999999


Q ss_pred             CcccccCCCCcccccccCCCCccCccccc-----CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHh
Q 040363          402 LSKVMDIGQSYVSSEVRGTFGYVDPEYRR-----NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMR  476 (548)
Q Consensus       402 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~  476 (548)
                      +++..............||+.|+|||++.     ...++.++|||||||++|||++|+.||...+     .......+..
T Consensus       221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~  295 (437)
T 4aw2_A          221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMN  295 (437)
T ss_dssp             TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHT
T ss_pred             hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-----hhHHHHhhhh
Confidence            99877655444455578999999999986     5678999999999999999999999996432     2222222221


Q ss_pred             cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCC--CCCHHHHHHH
Q 040363          477 GGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQ--RPSMEQVVLR  523 (548)
Q Consensus       477 ~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~--RPT~~evl~~  523 (548)
                      ..  .....|.....+++++.+++.+|+   ..+|++  ||+++|+++|
T Consensus       296 ~~--~~~~~p~~~~~~s~~~~dLi~~lL---~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          296 HK--ERFQFPTQVTDVSENAKDLIRRLI---CSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HH--HHCCCCSSCCCSCHHHHHHHHTTS---SCGGGCTTTTTTHHHHTS
T ss_pred             cc--ccccCCcccccCCHHHHHHHHHHh---cccccccCCCCHHHHhCC
Confidence            11  111223333457899999888876   345666  9999999875


No 46 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.7e-42  Score=351.80  Aligned_cols=251  Identities=22%  Similarity=0.269  Sum_probs=207.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||++... +++.||+|.+... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            478999999999999999999964 6889999998644 34457889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC--CCCEEEEeccCcccccCCCCc
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA--DFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~--~~~~kL~DFGla~~~~~~~~~  412 (548)
                      ++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.  ++.+||+|||+++......  
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--  158 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--  158 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence            999999999666667999999999999999999999887   999999999999987  7899999999998765332  


Q ss_pred             ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCC
Q 040363          413 VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEY  492 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  492 (548)
                      ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....     .......+.....   ..++.....+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~---~~~~~~~~~~  230 (321)
T 1tki_A          159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEY---TFDEEAFKEI  230 (321)
T ss_dssp             EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC---CCCHHHHTTS
T ss_pred             ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHcCCC---CCChhhhccC
Confidence            2344579999999999999889999999999999999999999996432     2333333332211   1111222356


Q ss_pred             CHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          493 SVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       493 s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +.++.+++.+|+   ..||++|||+.|++++
T Consensus       231 s~~~~~li~~~L---~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          231 SIEAMDFVDRLL---VKERKSRMTASEALQH  258 (321)
T ss_dssp             CHHHHHHHHTTS---CSSGGGSCCHHHHHHS
T ss_pred             CHHHHHHHHHHc---CCChhHCcCHHHHhcC
Confidence            777777666665   5589999999999985


No 47 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=9.6e-42  Score=357.73  Aligned_cols=257  Identities=27%  Similarity=0.405  Sum_probs=209.9

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ..++|.+.+.||+|+||.||+|... +++.||||.+...   ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3468999999999999999999975 7899999998643   23346889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++|+|.+++......+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.......
T Consensus       192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY  268 (377)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence            999999999999776667999999999999999999999887   99999999999999999999999999986543221


Q ss_pred             ccc-ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          412 YVS-SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       412 ~~~-~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                      ... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....     .......+..+..      ...+
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~------~~~~  337 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-----NQQTREFVEKGGR------LPCP  337 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----HHHHHHHHHTTCC------CCCC
T ss_pred             eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCC------CCCC
Confidence            111 12235778999999998999999999999999999998 999986432     3333344433322      1223


Q ss_pred             CCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          490 GEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      ...+++.    .+++..|+. +|++|||+.++++.|+++.+.
T Consensus       338 ~~~~~~l----~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          338 ELCPDAV----FRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             TTCCHHH----HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCHHH----HHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            3455554    455566665 899999999999999998753


No 48 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.5e-41  Score=353.97  Aligned_cols=266  Identities=23%  Similarity=0.364  Sum_probs=214.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEc--------CCcEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS--------NGQQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDH  324 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~  324 (548)
                      .++|.+.+.||+|+||.||+|...        ++..||+|++...   ...+++.+|+++++.+ +||||+++++++..+
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            468999999999999999999852        2357999998654   3346789999999999 899999999999999


Q ss_pred             CceEEEEEecCCCChhHHhhhcc---------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE
Q 040363          325 NESFLVYELCHNGNLSEWLYGKA---------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl  389 (548)
                      +..++||||+++|+|.+++....               ..+++..++.++.|++.||.|||+.+   |+||||||+|||+
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence            99999999999999999996543               35899999999999999999999877   9999999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcH
Q 040363          390 NADFQAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPL  467 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~  467 (548)
                      +.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....     .
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-----~  299 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----V  299 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----H
Confidence            9999999999999987654332 22344567899999999999999999999999999999999 999985332     3


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCcc
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRS  539 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s  539 (548)
                      ..+.+.+....      .+..+..++++..+++.+++   ..+|++|||++||+++|++++...........
T Consensus       300 ~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l---~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~  362 (382)
T 3tt0_A          300 EELFKLLKEGH------RMDKPSNCTNELYMMMRDCW---HAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY  362 (382)
T ss_dssp             HHHHHHHHTTC------CCCCCSSCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred             HHHHHHHHcCC------CCCCCccCCHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence            44444443322      22333456766555554444   44899999999999999999987776554443


No 49 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.2e-41  Score=341.52  Aligned_cols=258  Identities=24%  Similarity=0.386  Sum_probs=198.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+|...    .+..||+|.+...   ...+.+.+|+.+++.++||||+++++++. ++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            468999999999999999999963    2457999988543   34567899999999999999999999985 467899


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCcc
Confidence            99999999999999766667999999999999999999999877   999999999999999999999999999877644


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......     .....+....      .+.+
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~~~~------~~~~  238 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGE------RLPM  238 (281)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTC------CCCC
T ss_pred             cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHHcCC------CCCC
Confidence            4333344567889999999998999999999999999999997 99998644321     1222222221      1233


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      +..++++..+++.+++   ..+|++|||+.|++++|+++++..+
T Consensus       239 ~~~~~~~l~~li~~~l---~~~p~~Rps~~~l~~~l~~~~~~~~  279 (281)
T 1mp8_A          239 PPNCPPTLYSLMTKCW---AYDPSRRPRFTELKAQLSTILEEEK  279 (281)
T ss_dssp             CTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHHHhc
Confidence            4456777666555554   4589999999999999999987654


No 50 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-41  Score=350.12  Aligned_cols=265  Identities=25%  Similarity=0.374  Sum_probs=211.7

Q ss_pred             HHHhhcCCccceeeeeecCceEEEEEEEc------CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccc
Q 040363          252 EVYSATNNLSASNYIGQGVAGKVYKGILS------NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCE  322 (548)
Q Consensus       252 e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~  322 (548)
                      .+....++|++.+.||+|+||.||+|...      +++.||+|.+...   ...+.+.+|+.+++.++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            34455689999999999999999999964      3489999998643   23567899999999999999999999999


Q ss_pred             cCCceEEEEEecCCCChhHHhhhcc-----------------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEe
Q 040363          323 DHNESFLVYELCHNGNLSEWLYGKA-----------------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIH  379 (548)
Q Consensus       323 ~~~~~~lV~E~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH  379 (548)
                      +.+..++||||+++++|.+++....                       ..+++.+++.++.|++.||.|||+.+   |+|
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH  197 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH  197 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence            9999999999999999999996532                       56899999999999999999999887   999


Q ss_pred             cccCCCCeeEcCCCCEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCC
Q 040363          380 RDIKPTNILINADFQAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVI  457 (548)
Q Consensus       380 ~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf  457 (548)
                      |||||+|||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            99999999999999999999999987643322 22334568999999999998899999999999999999999 99998


Q ss_pred             CCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          458 NLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ....     .......+..+. .     +..+..++.+..+++.+++   ..+|++|||+.+++++|+++.+....
T Consensus       278 ~~~~-----~~~~~~~~~~~~-~-----~~~~~~~~~~l~~li~~~l---~~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          278 YGMA-----HEEVIYYVRDGN-I-----LACPENCPLELYNLMRLCW---SKLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             TTSC-----HHHHHHHHHTTC-C-----CCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHTTC----
T ss_pred             CCCC-----hHHHHHHHhCCC-c-----CCCCCCCCHHHHHHHHHHc---ccCcccCCCHHHHHHHHHHHHhhhhh
Confidence            5432     333333333321 1     2233456666555554443   44899999999999999999865543


No 51 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.6e-41  Score=340.44  Aligned_cols=254  Identities=25%  Similarity=0.362  Sum_probs=200.1

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      ++|++.+.||+|+||.||+|...+++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            579999999999999999999988999999998533    2346788999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      +++ +|.+++......+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....... .
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  156 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K  156 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence            976 999998766678999999999999999999999877   99999999999999999999999999987653222 2


Q ss_pred             cccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCc-----cc-----
Q 040363          414 SSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNI-----AK-----  482 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~-----  482 (548)
                      .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||....    ......+.....+..     ..     
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS----EADQLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHHCCCChhhchhhhccc
Confidence            234568999999999876 468999999999999999999999996432    122222221111100     00     


Q ss_pred             ccCC-----------CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          483 FADP-----------TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       483 ~~d~-----------~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..++           .....++++..+++.+|+   ..||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKML---KLDPNQRITAKQALEH  281 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHc---CCCcccCCCHHHHhcC
Confidence            0000           122346777777777766   6699999999999864


No 52 
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=3.2e-41  Score=339.48  Aligned_cols=275  Identities=19%  Similarity=0.205  Sum_probs=215.0

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccc-ccCCceEEEEEe
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYC-EDHNESFLVYEL  333 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~~~lV~E~  333 (548)
                      ..++|++.+.||+|+||.||+|.. .+++.||+|++......+.+.+|+.+++.++|++++..+..+ ...+..++||||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            347899999999999999999995 678999999886665556788999999999888776666554 667778999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCcccccCCC
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~~~~  410 (548)
                      + +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||+   +.++.+||+|||+++......
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            9 89999999766678999999999999999999999887   9999999999999   788999999999998775443


Q ss_pred             Cc------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCC--cHHHHHHHHHhcCCccc
Q 040363          411 SY------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPM--PLDKMAKFVMRGGNIAK  482 (548)
Q Consensus       411 ~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~  482 (548)
                      ..      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........  ...........      
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------  236 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS------  236 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH------
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc------
Confidence            21      22356799999999999999999999999999999999999999975443221  12222211111      


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCcccccc
Q 040363          483 FADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRSHRNC  543 (548)
Q Consensus       483 ~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~~~~  543 (548)
                      ...+.+...++++..+++.+++   ..+|++|||+.++++.|+++++.....-...-+|+.
T Consensus       237 ~~~~~~~~~~~~~l~~li~~~l---~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~  294 (296)
T 4hgt_A          237 TPIEVLCKGYPSEFATYLNFCR---SLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM  294 (296)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHH---TSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGG
T ss_pred             chhhhhhccCCHHHHHHHHHHH---hcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhh
Confidence            0011222345666666555555   458999999999999999999888877766666654


No 53 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.1e-41  Score=343.71  Aligned_cols=262  Identities=25%  Similarity=0.354  Sum_probs=203.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE-----cCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccC--Cce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-----SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDH--NES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~  327 (548)
                      .++|++.+.||+|+||.||++..     .+++.||+|++...  ...+.+.+|+.+++.++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            36899999999999999999984     36889999998644  3346789999999999999999999987543  558


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~  165 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP  165 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence            9999999999999999776677999999999999999999999877   9999999999999999999999999998765


Q ss_pred             CCCC--cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCC--------CCCc---HHHHHHHH
Q 040363          408 IGQS--YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDN--------RPMP---LDKMAKFV  474 (548)
Q Consensus       408 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~--------~~~~---~~~~~~~~  474 (548)
                      ....  .......++..|+|||.+.+..++.++||||||+++|||++|..|+.....        ....   .......+
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (295)
T 3ugc_A          166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  245 (295)
T ss_dssp             ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence            4332  122334578889999999999999999999999999999999998853210        0111   11111122


Q ss_pred             HhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          475 MRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       475 ~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      ...      .....+..++++..+    ++..|+. +|++|||+.|+++.|+++++..
T Consensus       246 ~~~------~~~~~~~~~~~~l~~----li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          246 KNN------GRLPRPDGCPDEIYM----IMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HTT------CCCCCCTTCCHHHHH----HHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             hcc------CcCCCCcCcCHHHHH----HHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            211      122234456666555    4555555 8999999999999999998653


No 54 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=8e-41  Score=340.87  Aligned_cols=259  Identities=28%  Similarity=0.411  Sum_probs=202.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecC----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIIS----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|.+.++||+|+||.||+|...  ..+|+|.+..    ....+.+.+|+.+++.++||||+++++++. .+..++|||
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e  111 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence            478999999999999999999853  3588888743    234567899999999999999999999875 456899999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC-CC
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG-QS  411 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~-~~  411 (548)
                      |+++++|.+++......+++.+++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..... ..
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~  188 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred             cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence            99999999999777788999999999999999999999877   999999999999999999999999999865432 22


Q ss_pred             cccccccCCCCccCccccc---CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRR---NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .......||+.|+|||++.   +..++.++||||||+++|||++|+.||....    ...............  ...+.+
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~----~~~~~~~~~~~~~~~--~~~~~~  262 (307)
T 3lb7_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN----NRDQIIFMVGRGYAS--PDLSKL  262 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC----CHHHHHHHHHHTCCC--CCSTTS
T ss_pred             ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC----cHHHHHHHHhcCCCC--cchhhh
Confidence            2334467999999999886   6678999999999999999999999996433    223333322222111  111233


Q ss_pred             CCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          489 NGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      ....+++..++    +..|+. +|++|||+.|++++|+.+....
T Consensus       263 ~~~~~~~l~~l----i~~~l~~~p~~RPs~~~il~~l~~l~~~~  302 (307)
T 3lb7_A          263 YKNCPKAMKRL----VADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             CSSSCHHHHHH----HHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             hcCCcHHHHHH----HHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence            34566665554    445555 8999999999999999987554


No 55 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=1.7e-41  Score=342.23  Aligned_cols=258  Identities=25%  Similarity=0.341  Sum_probs=201.6

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ++|++.+.||+|+||.||+|... +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            58999999999999999999964 6899999998532    334678899999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~  412 (548)
                      |+++ +|.+.+....+.+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  156 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R  156 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence            9976 676666566678999999999999999999999887   9999999999999999999999999998765332 2


Q ss_pred             ccccccCCCCccCcccccCCC-CCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC--Ccccc------
Q 040363          413 VSSEVRGTFGYVDPEYRRNHH-VSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG--NIAKF------  483 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~------  483 (548)
                      ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||....+.......+.+......  .+...      
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence            234467899999999987765 899999999999999999999887543322111111111111000  00000      


Q ss_pred             ----------cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ----------ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ----------~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                ........++.+..+++.+|+   ..||++|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLL---KCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHS---CSSGGGSCCHHHHHTS
T ss_pred             cccccccCCcchhhcccccChHHHHHHHHHh---ccChhhCCCHHHHhcC
Confidence                      001112346777777777766   5699999999999874


No 56 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=1.7e-41  Score=355.72  Aligned_cols=258  Identities=26%  Similarity=0.408  Sum_probs=198.8

Q ss_pred             cCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+|+.+    ++..||||++...   ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            368999999999999999999864    5778999998543   345678999999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++......+++.+++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence            99999999999999776678999999999999999999999877   999999999999999999999999999876543


Q ss_pred             CCcc--cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          410 QSYV--SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       410 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ....  .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....     .....+.+....      ..
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----~~~~~~~i~~~~------~~  269 (373)
T 2qol_A          201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDEGY------RL  269 (373)
T ss_dssp             -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----HHHHHHHHHTTE------EC
T ss_pred             CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC------CC
Confidence            2221  222345788999999999999999999999999999998 999985432     333333333221      11


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          487 TINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      ..+...+.+.    .+++..|+. +|++|||+.||++.|+++++...
T Consensus       270 ~~~~~~~~~l----~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~  312 (373)
T 2qol_A          270 PPPMDCPAAL----YQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG  312 (373)
T ss_dssp             CCCTTCBHHH----HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred             CCCccccHHH----HHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence            2223455554    445555665 89999999999999999987643


No 57 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=9.2e-42  Score=355.18  Aligned_cols=247  Identities=23%  Similarity=0.324  Sum_probs=203.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccC-CCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+|+.+ +++.||||++...     ...+.+.+|..+++.+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            479999999999999999999964 6899999998543     3456788999999988 79999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       102 v~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence            9999999999999954 467999999999999999999999887   999999999999999999999999999864322


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                       .......+||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+...       ...++
T Consensus       178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~-------~~~~p  244 (353)
T 3txo_A          178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILND-------EVVYP  244 (353)
T ss_dssp             ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCCC
T ss_pred             -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC-------CCCCC
Confidence             223445689999999999999999999999999999999999999996433     23333333332       12344


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCH------HHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSM------EQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~------~evl~~  523 (548)
                      ..+++++.+++.+|+   ..+|++||++      +|+++|
T Consensus       245 ~~~~~~~~~li~~lL---~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          245 TWLHEDATGILKSFM---TKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             TTSCHHHHHHHHHHT---CSSGGGSTTSGGGTCTHHHHTS
T ss_pred             CCCCHHHHHHHHHHh---hhCHHHccCCcccCCHHHHhhC
Confidence            557888888888877   6799999998      777763


No 58 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=4.1e-41  Score=341.88  Aligned_cols=258  Identities=25%  Similarity=0.379  Sum_probs=211.0

Q ss_pred             cCCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      .++|.+.+.||+|+||.||+|..      .+++.||+|++...   ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            46899999999999999999985      24578999998643   3446788999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc-----------------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCC
Q 040363          328 FLVYELCHNGNLSEWLYGKA-----------------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKP  384 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp  384 (548)
                      ++||||+++++|.+++....                       ..+++..++.++.|++.||.|||+.+   |+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence            99999999999999996532                       24899999999999999999999887   99999999


Q ss_pred             CCeeEcCCCCEEEEeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCC
Q 040363          385 TNILINADFQAKLSDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDN  462 (548)
Q Consensus       385 ~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~  462 (548)
                      +||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999876543322 2234567889999999999999999999999999999999 9999864432


Q ss_pred             CCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhh
Q 040363          463 RPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~  531 (548)
                           ..+...+....      .+..+..++++..+++.+|+   ..||++|||+.|++++|+++++..
T Consensus       259 -----~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~~l~~~l~~~~~~~  313 (314)
T 2ivs_A          259 -----ERLFNLLKTGH------RMERPDNCSEEMYRLMLQCW---KQEPDKRPVFADISKDLEKMMVKR  313 (314)
T ss_dssp             -----GGHHHHHHTTC------CCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             -----HHHHHHhhcCC------cCCCCccCCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHhhc
Confidence                 12222222221      22334556777666555554   458999999999999999998753


No 59 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.3e-41  Score=354.72  Aligned_cols=278  Identities=17%  Similarity=0.150  Sum_probs=210.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEcC------CcEEEEEEecCcch-------------HHHHHHHHHhcccCCCCceeee
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSN------GQQVAVKHIISDGY-------------VDTFVREVRSLSHVQHPNLVAL  317 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~------g~~vAvK~i~~~~~-------------~~~~~~E~~il~~l~hpnIv~l  317 (548)
                      .++|++.++||+|+||.||+|.+.+      ++.||||++.....             ...+..|+..++.++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            4689999999999999999999754      47899999854421             1123456667778899999999


Q ss_pred             ecccccC----CceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc--C
Q 040363          318 LSYCEDH----NESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN--A  391 (548)
Q Consensus       318 ~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~--~  391 (548)
                      ++++...    ...++||||+ +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++  .
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESSC
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecCC
Confidence            9998664    4579999999 99999999776678999999999999999999999887   99999999999999  8


Q ss_pred             CCCEEEEeccCcccccCCCCc------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 040363          392 DFQAKLSDFGLSKVMDIGQSY------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPM  465 (548)
Q Consensus       392 ~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~  465 (548)
                      ++.+||+|||+++.+......      ......||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~  269 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK  269 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence            899999999999876533221      11345599999999999999999999999999999999999999974332211


Q ss_pred             cHHHHHHHHHhcCCcccccCCCCC-CCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcCCCCCcccccc
Q 040363          466 PLDKMAKFVMRGGNIAKFADPTIN-GEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKTSNSYRSHRNC  543 (548)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~~d~~l~-~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~~~~  543 (548)
                      ........  ....+....++.+. ..++.+..+++    ..|+. +|++||++.++++.|+++++......+....|..
T Consensus       270 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li----~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~  343 (364)
T 3op5_A          270 YVRDSKIR--YRENIASLMDKCFPAANAPGEIAKYM----ETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSV  343 (364)
T ss_dssp             HHHHHHHH--HHHCHHHHHHHHSCTTCCCHHHHHHH----HHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC--
T ss_pred             HHHHHHHH--hhhhHHHHHHHhcccccCHHHHHHHH----HHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceEe
Confidence            11111111  11122222222222 34566655544    45555 8999999999999999999887777666666554


Q ss_pred             C
Q 040363          544 I  544 (548)
Q Consensus       544 ~  544 (548)
                      .
T Consensus       344 ~  344 (364)
T 3op5_A          344 V  344 (364)
T ss_dssp             -
T ss_pred             c
Confidence            3


No 60 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=4.5e-41  Score=344.95  Aligned_cols=244  Identities=24%  Similarity=0.312  Sum_probs=207.2

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||++..+ +|+.||+|++...     ...+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            368999999999999999999964 6999999998543     3456788999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..... 
T Consensus        85 ~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-  159 (318)
T 1fot_A           85 MDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-  159 (318)
T ss_dssp             ECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred             EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence            999999999999954 457899999999999999999999777   999999999999999999999999999875422 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                         .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+     .....+.+...       ...++.
T Consensus       160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~-------~~~~p~  224 (318)
T 1fot_A          160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----TMKTYEKILNA-------ELRFPP  224 (318)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHC-------CCCCCT
T ss_pred             ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhC-------CCCCCC
Confidence               234679999999999999999999999999999999999999996432     22233333322       123445


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCC-----CHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRP-----SMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RP-----T~~evl~~  523 (548)
                      .+++++.+++.+|+   ..||++||     +++|+++|
T Consensus       225 ~~~~~~~~li~~lL---~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          225 FFNEDVKDLLSRLI---TRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             TSCHHHHHHHHHHT---CSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCHHHHHHHHHHh---ccCHHHcCCCcCCCHHHHhcC
Confidence            67888888888877   67999999     89999865


No 61 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=7.6e-42  Score=362.70  Aligned_cols=257  Identities=21%  Similarity=0.254  Sum_probs=209.4

Q ss_pred             HHHHhhcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccC
Q 040363          251 KEVYSATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDH  324 (548)
Q Consensus       251 ~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~  324 (548)
                      .++....++|++.++||+|+||.||++..+ +++.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            345556789999999999999999999965 5889999998542     2234578999999999999999999999999


Q ss_pred             CceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          325 NESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      +..++||||+++|+|.+++..  ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~  216 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM  216 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeE
Confidence            999999999999999999843  46899999999999999999999887   9999999999999999999999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCC----CCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCc
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHH----VSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNI  480 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~  480 (548)
                      ..............||+.|+|||++.+..    ++.++||||||+++|||++|+.||...+     .......+......
T Consensus       217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~  291 (410)
T 3v8s_A          217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMNHKNS  291 (410)
T ss_dssp             ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTHHHH
T ss_pred             eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-----hhhHHHHHHhcccc
Confidence            77654433445678999999999987765    8899999999999999999999996432     22222222221100


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCC--CCCHHHHHHH
Q 040363          481 AKFADPTINGEYSVEAFDLVFKLALSCTGIKQQ--RPSMEQVVLR  523 (548)
Q Consensus       481 ~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~--RPT~~evl~~  523 (548)
                         ........++.++.+++.+|+   ..+|++  ||+++||++|
T Consensus       292 ---~~~p~~~~~s~~~~~li~~lL---~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          292 ---LTFPDDNDISKEAKNLICAFL---TDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             ---CCCCTTCCCCHHHHHHHHHHS---SCGGGCTTSSCHHHHHTS
T ss_pred             ---ccCCCcccccHHHHHHHHHHc---cChhhhCCCCCHHHHhcC
Confidence               111112357888888888876   446777  9999999976


No 62 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.8e-41  Score=356.65  Aligned_cols=252  Identities=21%  Similarity=0.286  Sum_probs=206.7

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccC-CCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.++||+|+||.||+++.+ +++.||+|++...     ...+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            468999999999999999999964 5889999998543     2234678899999887 89999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++|+|..++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.... 
T Consensus       131 V~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~-  205 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-  205 (396)
T ss_dssp             EEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-
T ss_pred             EEEcCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc-
Confidence            9999999999999854 467999999999999999999999887   99999999999999999999999999986332 


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCC----CcHHHHHHHHHhcCCcccccC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRP----MPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      ........+||+.|+|||++.+..++.++||||||+++|||++|+.||.......    .....+.+.+...       .
T Consensus       206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-------~  278 (396)
T 4dc2_A          206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------Q  278 (396)
T ss_dssp             TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-------C
T ss_pred             CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-------c
Confidence            2233456789999999999999999999999999999999999999996443221    2223333333322       2


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCH------HHHHHH
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSM------EQVVLR  523 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~------~evl~~  523 (548)
                      ..++..+++++.+++.+|+   ..||++||++      .|+++|
T Consensus       279 ~~~p~~~s~~~~~li~~lL---~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          279 IRIPRSLSVKAASVLKSFL---NKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             CCCCTTSCHHHHHHHHHHT---CSCTTTSTTCSTTTHHHHHHHS
T ss_pred             cCCCCcCCHHHHHHHHHHh---cCCHhHcCCCCCCCCHHHHhcC
Confidence            3445567888888888877   6799999995      566554


No 63 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1e-40  Score=342.18  Aligned_cols=246  Identities=23%  Similarity=0.274  Sum_probs=201.9

Q ss_pred             ccceeeeeecCceEEEEEEEc-CCcEEEEEEecC--cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecCC
Q 040363          260 LSASNYIGQGVAGKVYKGILS-NGQQVAVKHIIS--DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCHN  336 (548)
Q Consensus       260 y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~  336 (548)
                      |+..+.||+|+||.||+|... +|+.||||++..  ....+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            778889999999999999975 799999999853  33456789999999999999999999999999999999999999


Q ss_pred             CChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCccccc
Q 040363          337 GNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSSE  416 (548)
Q Consensus       337 gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  416 (548)
                      ++|.+++.  ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++........ ....
T Consensus       127 ~~L~~~l~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~  200 (321)
T 2c30_A          127 GALTDIVS--QVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKS  200 (321)
T ss_dssp             CBHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCC
T ss_pred             CCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-cccc
Confidence            99999984  346899999999999999999999877   99999999999999999999999999987653322 2345


Q ss_pred             ccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHH
Q 040363          417 VRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEA  496 (548)
Q Consensus       417 ~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~  496 (548)
                      ..||+.|+|||++.+..++.++||||||+++|||++|+.||....     .......+.... ...   ......++++.
T Consensus       201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~-~~~---~~~~~~~~~~l  271 (321)
T 2c30_A          201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-----PVQAMKRLRDSP-PPK---LKNSHKVSPVL  271 (321)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSS-CCC---CTTGGGSCHHH
T ss_pred             ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCC-CCC---cCccccCCHHH
Confidence            679999999999999999999999999999999999999996432     222222222221 111   11123456676


Q ss_pred             HHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          497 FDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       497 ~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+++.+|+   ..||++|||+.|++++
T Consensus       272 ~~li~~~l---~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          272 RDFLERML---VRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHHHHS---CSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHc---cCChhhCcCHHHHhcC
Confidence            66666554   4589999999999875


No 64 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=8.1e-41  Score=334.48  Aligned_cols=259  Identities=22%  Similarity=0.359  Sum_probs=211.8

Q ss_pred             hcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      ..++|++.+.||+|+||.||+|..++++.||+|.+... ...+.+.+|+++++.++||||+++++++. .+..++||||+
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            34689999999999999999999888889999998644 34678999999999999999999999886 45689999999


Q ss_pred             CCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          335 HNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       335 ~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      ++++|.+++.... ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++..........
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence            9999999995433 26899999999999999999999887   9999999999999999999999999998776444333


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEY  492 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  492 (548)
                      .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....     .......+...      ..+..+..+
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~------~~~~~~~~~  235 (279)
T 1qpc_A          167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERG------YRMVRPDNC  235 (279)
T ss_dssp             CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTT------CCCCCCTTC
T ss_pred             ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhcc------cCCCCcccc
Confidence            344567889999999998899999999999999999999 899985432     23333333322      122334456


Q ss_pred             CHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          493 SVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       493 s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      +.+..+++.+|+   ..+|++|||+.++++.|++++....
T Consensus       236 ~~~l~~li~~~l---~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          236 PEELYQLMRLCW---KERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             CHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             cHHHHHHHHHHh---ccChhhCCCHHHHHHHHHHHHHhcc
Confidence            766665555544   4589999999999999999986543


No 65 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=3.5e-41  Score=340.75  Aligned_cols=260  Identities=25%  Similarity=0.371  Sum_probs=208.7

Q ss_pred             CCccceeeeeecCceEEEEEEE-----cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccC--Cce
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-----SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDH--NES  327 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~  327 (548)
                      .+|++.+.||+|+||.||++..     .+++.||+|++...   ...+.+.+|+.+++.++||||+++++++.+.  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4699999999999999999983     46899999998643   3456889999999999999999999998776  668


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+++++|.+++......+++..++.++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence            9999999999999999777778999999999999999999999877   9999999999999999999999999998776


Q ss_pred             CCCC--cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCC----------CCCCcHHHHHHHHH
Q 040363          408 IGQS--YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGD----------NRPMPLDKMAKFVM  475 (548)
Q Consensus       408 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~----------~~~~~~~~~~~~~~  475 (548)
                      ....  .......||..|+|||.+.+..++.++||||||+++|+|++|+.|+....          ..............
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (302)
T 4e5w_A          178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK  257 (302)
T ss_dssp             TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred             CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence            4432  22344568889999999999999999999999999999999999864221          11112222222222


Q ss_pred             hcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhh
Q 040363          476 RGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALD  529 (548)
Q Consensus       476 ~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~  529 (548)
                      ..      .....+..++++..+++.+|+   ..||++|||+.|+++.|+++++
T Consensus       258 ~~------~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          258 EG------KRLPCPPNCPDEVYQLMRKCW---EFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             TT------CCCCCCTTCCHHHHHHHHHTT---CSSGGGSCCHHHHHHHHHHHHC
T ss_pred             cc------CCCCCCCCCCHHHHHHHHHHc---CCCCCCCCCHHHHHHHHHHHhC
Confidence            22      122334456766655555544   4489999999999999999874


No 66 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.5e-41  Score=348.75  Aligned_cols=251  Identities=22%  Similarity=0.319  Sum_probs=203.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc---hHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG---YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|++....   ..+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            478999999999999999999965 78999999985432   23568899999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC-C
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ-S  411 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~-~  411 (548)
                      |+++++|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.... .
T Consensus        86 ~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           86 YCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             CCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             cCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            999999999984 4457999999999999999999999877   9999999999999999999999999998764332 2


Q ss_pred             cccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      .......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...........   .. ....     .......
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---~~-~~~~-----~~~~~~~  232 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DW-KEKK-----TYLNPWK  232 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH---HH-HTTC-----TTSTTGG
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HH-hccc-----ccCCccc
Confidence            23345679999999999987765 7899999999999999999999975443222111   11 1111     1111124


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++++..+++.+|+   ..||++|||+.|++++
T Consensus       233 ~~~~~~~~li~~~L---~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          233 KIDSAPLALLHKIL---VENPSARITIPDIKKD  262 (323)
T ss_dssp             GSCHHHHHHHHHHS---CSSTTTSCCHHHHTTC
T ss_pred             cCCHHHHHHHHHHc---cCChhhCcCHHHHhhC
Confidence            56777777666665   5689999999999875


No 67 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.7e-42  Score=362.89  Aligned_cols=262  Identities=21%  Similarity=0.232  Sum_probs=211.1

Q ss_pred             hhHHHHHhhcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeeccc
Q 040363          248 IAIKEVYSATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYC  321 (548)
Q Consensus       248 ~~~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~  321 (548)
                      +...+.....++|++.+.||+|+||.||++..+ +|+.||+|++...     ...+.+.+|..++..++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            344556667789999999999999999999974 7999999998543     2234578999999999999999999999


Q ss_pred             ccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEecc
Q 040363          322 EDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFG  401 (548)
Q Consensus       322 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFG  401 (548)
                      .+.+..++||||+++|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++++||+|||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence            9999999999999999999999766568999999999999999999999887   9999999999999999999999999


Q ss_pred             CcccccCCCCcccccccCCCCccCccccc-------CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHH
Q 040363          402 LSKVMDIGQSYVSSEVRGTFGYVDPEYRR-------NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFV  474 (548)
Q Consensus       402 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~  474 (548)
                      +++..............||+.|+|||++.       ...++.++|||||||++|||++|+.||...+     .......+
T Consensus       208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i  282 (412)
T 2vd5_A          208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-----TAETYGKI  282 (412)
T ss_dssp             TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHH
T ss_pred             hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-----HHHHHHHH
Confidence            99887654443344568999999999987       4578999999999999999999999996433     22222222


Q ss_pred             HhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC---CCHHHHHHH
Q 040363          475 MRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQR---PSMEQVVLR  523 (548)
Q Consensus       475 ~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~R---PT~~evl~~  523 (548)
                      ....  .....|.....+++++.+++.+|+   . +|++|   |+++|+++|
T Consensus       283 ~~~~--~~~~~p~~~~~~s~~~~dli~~lL---~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          283 VHYK--EHLSLPLVDEGVPEEARDFIQRLL---C-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HTHH--HHCCCC----CCCHHHHHHHHTTS---S-CGGGCTTTTTHHHHHTS
T ss_pred             Hhcc--cCcCCCccccCCCHHHHHHHHHHc---C-ChhhcCCCCCHHHHhcC
Confidence            2110  011123334567888888777765   3 88766   799999875


No 68 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3e-41  Score=342.70  Aligned_cols=260  Identities=27%  Similarity=0.394  Sum_probs=211.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccCCc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNE  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~  326 (548)
                      .++|++.+.||+|+||.||+|..      .+++.||+|.+...   ...+.+.+|+.+++.+ +||||+++++++.+++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            46899999999999999999984      34689999998644   2346789999999999 89999999999999999


Q ss_pred             eEEEEEecCCCChhHHhhhccC-----------------cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE
Q 040363          327 SFLVYELCHNGNLSEWLYGKAG-----------------VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl  389 (548)
                      .++||||+++|+|.+++.....                 .+++..++.++.|++.||.|||+.+   |+||||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence            9999999999999999965432                 4899999999999999999999887   9999999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcH
Q 040363          390 NADFQAKLSDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPL  467 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~  467 (548)
                      +.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......    
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----  254 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----  254 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence            99999999999999876544332 2334567889999999999999999999999999999999 99998644321    


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      ..........      ..+..+...+.+..+++.+|+   ..||++|||+.|++++|+++++...
T Consensus       255 ~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          255 SKFYKMIKEG------FRMLSPEHAPAEMYDIMKTCW---DADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             HHHHHHHHHT------CCCCCCTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHhccC------CCCCCcccCCHHHHHHHHHHc---CCCchhCcCHHHHHHHHHHHHHHhh
Confidence            2222222221      112223456666666555544   4589999999999999999997654


No 69 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.4e-41  Score=347.69  Aligned_cols=249  Identities=25%  Similarity=0.336  Sum_probs=204.2

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc--------hHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG--------YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~--------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      ++|++.+.||+|+||.||++... +++.||+|.+....        ..+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            57999999999999999999964 68999999985321        3567999999999999999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC----CEEEEeccCcc
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF----QAKLSDFGLSK  404 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~----~~kL~DFGla~  404 (548)
                      +||||+++++|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++    .+||+|||+++
T Consensus        91 lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           91 LILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             EEEECCCSCBHHHHHT-TSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEcCCCCCHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            9999999999999995 4467999999999999999999999887   99999999999999887    79999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ......  ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....     .......+....   ...
T Consensus       167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~---~~~  236 (326)
T 2y0a_A          167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANVSAVN---YEF  236 (326)
T ss_dssp             ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHTC---CCC
T ss_pred             ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHHhcC---CCc
Confidence            765332  2344679999999999999999999999999999999999999995432     222222222211   011


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ........+.++.+++.+|+   ..||++|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          237 EDEYFSNTSALAKDFIRRLL---VKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             CHHHHTTSCHHHHHHHHHHS---CSSGGGSCCHHHHHHS
T ss_pred             CccccccCCHHHHHHHHHHc---cCChhhCCCHHHHhcC
Confidence            11222345777667666665   5689999999999974


No 70 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.9e-41  Score=362.86  Aligned_cols=258  Identities=21%  Similarity=0.374  Sum_probs=210.8

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      ...++|++.+.||+|+||.||+|..++++.||||++... ...+.+.+|+.+++.++||||+++++++. .+..++||||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~  263 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF  263 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence            345789999999999999999999988999999999643 45678999999999999999999999986 5678999999


Q ss_pred             cCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc
Q 040363          334 CHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       334 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~  412 (548)
                      +++|+|.+++.... ..+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++........
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence            99999999996443 36888999999999999999999877   999999999999999999999999999876533222


Q ss_pred             ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          413 VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                      ......+|..|+|||.+....++.++||||||+++|||++ |+.||....     ...+...+..+..      ...+..
T Consensus       341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~------~~~~~~  409 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALERGYR------MPRPEN  409 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHHTCC------CCCCTT
T ss_pred             ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCC------CCCCCC
Confidence            2333456789999999998999999999999999999999 999996432     3334444443322      122334


Q ss_pred             CCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          492 YSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      .+++..    .++.+|+. ||++|||+++|++.|+++....
T Consensus       410 ~~~~l~----~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          410 CPEELY----NIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             SCHHHH----HHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             CCHHHH----HHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence            566544    45555665 8999999999999999887543


No 71 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=7.3e-41  Score=338.56  Aligned_cols=248  Identities=24%  Similarity=0.337  Sum_probs=197.3

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc----------------------------hHHHHHHHHHhcc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG----------------------------YVDTFVREVRSLS  307 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~----------------------------~~~~~~~E~~il~  307 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++....                            ..+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            47899999999999999999996 468999999985432                            1246889999999


Q ss_pred             cCCCCceeeeeccccc--CCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCC
Q 040363          308 HVQHPNLVALLSYCED--HNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPT  385 (548)
Q Consensus       308 ~l~hpnIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~  385 (548)
                      .++||||+++++++.+  .+..++||||+++++|.+++  ....+++..++.++.|++.||.|||+.+   |+||||||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~  166 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPS  166 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHH
Confidence            9999999999999876  56789999999999999876  3457999999999999999999999887   999999999


Q ss_pred             CeeEcCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCC---CCccccHHHHHHHHHHHHcCCCCCCCCCC
Q 040363          386 NILINADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHH---VSTSGDVYSFGVVLLQLLSGQRVINLGDN  462 (548)
Q Consensus       386 NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDIwSlGvil~eLltG~~pf~~~~~  462 (548)
                      |||++.++.+||+|||+++....... ......||+.|+|||.+.+..   ++.++||||||+++|||++|+.||.... 
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-  244 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER-  244 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred             HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-
Confidence            99999999999999999987653322 234467999999999987755   4789999999999999999999995332 


Q ss_pred             CCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          463 RPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                          ...+...+.... .    .......++++..+++.+|+   ..||++|||+.|++++
T Consensus       245 ----~~~~~~~~~~~~-~----~~~~~~~~~~~l~~li~~~l---~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          245 ----IMCLHSKIKSQA-L----EFPDQPDIAEDLKDLITRML---DKNPESRIVVPEIKLH  293 (298)
T ss_dssp             ----HHHHHHHHHHCC-C----CCCSSSCCCHHHHHHHHHHT---CSCTTTSCCHHHHTTC
T ss_pred             ----HHHHHHHHhccc-C----CCCCccccCHHHHHHHHHHh---hcChhhCCCHHHHhcC
Confidence                223333222221 1    11122456777777666665   5689999999999864


No 72 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=5.6e-41  Score=348.12  Aligned_cols=251  Identities=22%  Similarity=0.287  Sum_probs=206.0

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccC-CCCceeeeecccccCCceEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      ++|++.+.||+|+||.||+++.+ +++.||+|++...     ...+.+.+|..++..+ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            68999999999999999999964 6899999998543     2345688999999988 899999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..... 
T Consensus        89 ~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-  163 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-  163 (345)
T ss_dssp             ECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-
T ss_pred             EeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC-
Confidence            999999999999954 457999999999999999999999887   999999999999999999999999999864322 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCC----CcHHHHHHHHHhcCCcccccCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRP----MPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ........||+.|+|||++.+..++.++||||||+++|||++|+.||.......    .....+.+.+...       ..
T Consensus       164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-------~~  236 (345)
T 3a8x_A          164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------QI  236 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-------CC
T ss_pred             CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-------CC
Confidence            223455689999999999999999999999999999999999999996432211    1222233333322       12


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCH------HHHHHH
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRPSM------EQVVLR  523 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~------~evl~~  523 (548)
                      .++..++.++.+++.+|+   ..||++||++      .|+++|
T Consensus       237 ~~p~~~s~~~~~li~~lL---~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          237 RIPRSLSVKAASVLKSFL---NKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             CCCTTSCHHHHHHHHHHT---CSSTTTSTTCCTTTHHHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHh---cCCHhHCCCCCCcCCHHHHhcC
Confidence            344567888888887776   6699999995      677654


No 73 
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.6e-41  Score=344.25  Aligned_cols=269  Identities=25%  Similarity=0.338  Sum_probs=203.8

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhccc--CCCCceeeeecccccC----CceE
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSH--VQHPNLVALLSYCEDH----NESF  328 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~----~~~~  328 (548)
                      ...++|++.+.||+|+||.||+|.. +++.||||++..... ....+|.+++..  ++||||+++++++...    ...+
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  111 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEE-ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY  111 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecccc-chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence            3446899999999999999999997 489999999865433 344445555444  4899999999998776    6789


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCC-----CCceEecccCCCCeeEcCCCCEEEEeccCc
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP-----EGCIIHRDIKPTNILINADFQAKLSDFGLS  403 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-----~~~IvH~DlKp~NILl~~~~~~kL~DFGla  403 (548)
                      +||||+++|+|.+++..  ..+++..++.++.|++.||.|||+..     ..+|+||||||+|||++.++.+||+|||++
T Consensus       112 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEeccCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            99999999999999943  46899999999999999999999760     113999999999999999999999999999


Q ss_pred             ccccCCCCcc---cccccCCCCccCcccccCCCCCcc------ccHHHHHHHHHHHHcC----------CCCCCCCCCCC
Q 040363          404 KVMDIGQSYV---SSEVRGTFGYVDPEYRRNHHVSTS------GDVYSFGVVLLQLLSG----------QRVINLGDNRP  464 (548)
Q Consensus       404 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------sDIwSlGvil~eLltG----------~~pf~~~~~~~  464 (548)
                      +.........   .....||+.|+|||++.+...+.+      +||||||+++|||++|          +.||.......
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence            7765333221   234579999999999987766655      9999999999999999          55654433333


Q ss_pred             CcHHHHHHHHHhcCCcccccCCCCCCCC-CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          465 MPLDKMAKFVMRGGNIAKFADPTINGEY-SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~-s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      .............     ...+.++... +.+..+.+.+++.+|+. ||++|||+.|++++|+++++...
T Consensus       270 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          270 PSYEDMREIVCIK-----KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             CCHHHHHHHHTTS-----CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             CchhhhHHHHhhh-----ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            3334333322211     1122222211 23566667788888887 79999999999999999987654


No 74 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.5e-41  Score=349.53  Aligned_cols=245  Identities=22%  Similarity=0.314  Sum_probs=202.5

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|.+.+.||+|+||.||+|.+ .+++.||+|++...     ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            47899999999999999999996 67899999998533     2245789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+ +|+|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++.......
T Consensus        88 ~E~~-~g~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           88 IEYA-GGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             ECCC-CEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EECC-CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            9999 6799998854 457999999999999999999999887   9999999999999999999999999998765332


Q ss_pred             CcccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                        ......||+.|+|||++.+..+ ++++||||||+++|+|++|+.||.........           ..+ ......++
T Consensus       163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------~~i-~~~~~~~p  228 (336)
T 3h4j_B          163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------KKV-NSCVYVMP  228 (336)
T ss_dssp             --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------CCC-CSSCCCCC
T ss_pred             --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------HHH-HcCCCCCc
Confidence              2345679999999999988776 78999999999999999999999654322110           000 11122334


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..+++++.+++.+|+   ..||.+|||++|++++
T Consensus       229 ~~~s~~~~~li~~~L---~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          229 DFLSPGAQSLIRRMI---VADPMQRITIQEIRRD  259 (336)
T ss_dssp             TTSCHHHHHHHHTTS---CSSGGGSCCHHHHTTC
T ss_pred             ccCCHHHHHHHHHHc---CCChhHCcCHHHHHhC
Confidence            556777777666665   5589999999999875


No 75 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=8.6e-41  Score=358.23  Aligned_cols=251  Identities=24%  Similarity=0.296  Sum_probs=206.1

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||++.. .+|+.+|+|++...    ...+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            46899999999999999999995 57899999998543    23457889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc---CCCCEEEEeccCcccccC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN---ADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~---~~~~~kL~DFGla~~~~~  408 (548)
                      ||+++|+|.+.+.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++   .++.+||+|||++.....
T Consensus        90 E~~~gg~L~~~i~~-~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           90 DLVTGGELFEDIVA-REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             CCCBCCBHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            99999999999854 467999999999999999999999887   99999999999998   467899999999987653


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .. .......||+.|+|||++.+..++.++||||||+++|+|++|+.||...+     .......+..+. .  ......
T Consensus       166 ~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~-~--~~~~~~  236 (444)
T 3soa_A          166 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----QHRLYQQIKAGA-Y--DFPSPE  236 (444)
T ss_dssp             TC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTC-C--CCCTTT
T ss_pred             CC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhCC-C--CCCccc
Confidence            32 22345679999999999999999999999999999999999999995432     233333333321 1  112223


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ...+++++.+++.+|+   ..||++|||+.|++++
T Consensus       237 ~~~~s~~~~~li~~~L---~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          237 WDTVTPEAKDLINKML---TINPSKRITAAEALKH  268 (444)
T ss_dssp             TTTSCHHHHHHHHHHS---CSSTTTSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHc---CCChhHCCCHHHHhcC
Confidence            3467888888777776   6699999999999975


No 76 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=2.4e-41  Score=350.95  Aligned_cols=247  Identities=27%  Similarity=0.370  Sum_probs=206.9

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccC-CCCceeeeecccccCCceE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~  328 (548)
                      ..++|++.+.||+|+||.||+|+.+ +++.||+|++...     ...+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            4579999999999999999999964 6899999998543     3456788899999877 8999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++|+|.+++.. .+.+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        95 lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             EEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence            99999999999999954 457899999999999999999999887   99999999999999999999999999986432


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .. .......||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+...       .+.+
T Consensus       171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~-------~~~~  237 (345)
T 1xjd_A          171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD-----EEELFHSIRMD-------NPFY  237 (345)
T ss_dssp             TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCC
T ss_pred             CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHhC-------CCCC
Confidence            22 23455789999999999999999999999999999999999999996432     23333333322       2334


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHH-HHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSME-QVVL  522 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~-evl~  522 (548)
                      +..++.++.+++.+|+   ..||++||++. ++++
T Consensus       238 p~~~s~~~~~li~~lL---~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          238 PRWLEKEAKDLLVKLF---VREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             CTTSCHHHHHHHHHHS---CSSGGGSBTTBSCGGG
T ss_pred             CcccCHHHHHHHHHHh---cCCHhHcCCChHHHHc
Confidence            5567888888887776   66999999997 6654


No 77 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=1.2e-41  Score=353.68  Aligned_cols=250  Identities=24%  Similarity=0.291  Sum_probs=203.7

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-------chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-------GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ++|++.+.||+|+||.||++.. .+++.||+|++...       ...+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            5799999999999999999996 46899999998432       135679999999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhc---cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC---EEEEeccCc
Q 040363          330 VYELCHNGNLSEWLYGK---AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ---AKLSDFGLS  403 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~---~kL~DFGla  403 (548)
                      ||||+++++|.+++...   ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            99999999999887543   235899999999999999999999887   999999999999987655   999999999


Q ss_pred             ccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          404 KVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       404 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      ....... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||...      .......+.... .  .
T Consensus       181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~i~~~~-~--~  250 (351)
T 3c0i_A          181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT------KERLFEGIIKGK-Y--K  250 (351)
T ss_dssp             EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS------HHHHHHHHHHTC-C--C
T ss_pred             eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHcCC-C--C
Confidence            8765432 2234567999999999999999999999999999999999999999642      122222222221 1  1


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..+.....++.++.+++.+|+   ..||++|||+.|++++
T Consensus       251 ~~~~~~~~~s~~~~~li~~~L---~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          251 MNPRQWSHISESAKDLVRRML---MLDPAERITVYEALNH  287 (351)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             CCccccccCCHHHHHHHHHHC---CCChhHCcCHHHHhcC
Confidence            112222456777777777766   6699999999999864


No 78 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=339.47  Aligned_cols=259  Identities=25%  Similarity=0.416  Sum_probs=203.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecCC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCHN  336 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~  336 (548)
                      .++|++.+.||+|+||.||++.. .++.||+|++..+...+.+.+|+.+++.++||||+++++++.+  ..++||||+++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~   83 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG   83 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred             HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence            36899999999999999999997 5789999999877777889999999999999999999999874  47899999999


Q ss_pred             CChhHHhhhccC--cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC-EEEEeccCcccccCCCCcc
Q 040363          337 GNLSEWLYGKAG--VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ-AKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       337 gsL~~~l~~~~~--~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~-~kL~DFGla~~~~~~~~~~  413 (548)
                      ++|.+++.....  .+++..++.++.|+++||.|||+.+..+|+||||||+||+++.++. +||+|||++......    
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----  159 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----  159 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence            999999965432  4688899999999999999999843345999999999999998887 799999999765422    


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYS  493 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s  493 (548)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ......+.....      ..+.....++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~------~~~~~~~~~~  230 (307)
T 2eva_A          160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG---PAFRIMWAVHNG------TRPPLIKNLP  230 (307)
T ss_dssp             -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS---SHHHHHHHHHTT------CCCCCBTTCC
T ss_pred             cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc---cHHHHHHHHhcC------CCCCcccccC
Confidence            2234689999999999999999999999999999999999999964332   222222222221      1223344567


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCC
Q 040363          494 VEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTS  534 (548)
Q Consensus       494 ~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~  534 (548)
                      .+..+++.+++   ..+|++|||+.|++++|+.+.+.....
T Consensus       231 ~~l~~li~~~l---~~dp~~Rps~~ell~~L~~~~~~~~~~  268 (307)
T 2eva_A          231 KPIESLMTRCW---SKDPSQRPSMEEIVKIMTHLMRYFPGA  268 (307)
T ss_dssp             HHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred             HHHHHHHHHHh---cCChhhCcCHHHHHHHHHHHHHhccCC
Confidence            66555554443   448999999999999999998766543


No 79 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-41  Score=347.22  Aligned_cols=262  Identities=24%  Similarity=0.360  Sum_probs=207.4

Q ss_pred             hcCCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccCC
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHN  325 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~  325 (548)
                      ..++|++.+.||+|+||.||+|..      .+++.||+|.+...   ...+.+.+|+.+++.+ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            457899999999999999999995      24568999998643   3446789999999999 8999999999999999


Q ss_pred             ceEEEEEecCCCChhHHhhhccC----------------------cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccC
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAG----------------------VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIK  383 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlK  383 (548)
                      ..++||||+++|+|.+++.....                      .+++..++.++.|++.||.|||+.+   |+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            99999999999999999965432                      3789999999999999999999887   9999999


Q ss_pred             CCCeeEcCCCCEEEEeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCC
Q 040363          384 PTNILINADFQAKLSDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGD  461 (548)
Q Consensus       384 p~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~  461 (548)
                      |+|||++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            99999999999999999999876543322 2334567889999999999999999999999999999998 999996543


Q ss_pred             CCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          462 NRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ..    ......+...      ..+..+...+++..+++.+|+   ..||.+|||+.|++++|+.+++....
T Consensus       280 ~~----~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~l~~~l~~~~~~~~~  338 (344)
T 1rjb_A          280 VD----ANFYKLIQNG------FKMDQPFYATEEIYIIMQSCW---AFDSRKRPSFPNLTSFLGCQLADAEE  338 (344)
T ss_dssp             CS----HHHHHHHHTT------CCCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHC-----
T ss_pred             cH----HHHHHHHhcC------CCCCCCCCCCHHHHHHHHHHc---CCCchhCcCHHHHHHHHHHHHHHHHH
Confidence            21    1222222221      122233445666555555444   44899999999999999999876554


No 80 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=5.7e-42  Score=355.86  Aligned_cols=252  Identities=26%  Similarity=0.317  Sum_probs=190.2

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      ..++|++.+.||+|+||.||+|... +++.||+|++......+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            3468999999999999999999975 588999999977666677889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC---CCCEEEEeccCcccccCCCC
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA---DFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~---~~~~kL~DFGla~~~~~~~~  411 (548)
                      ++++|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.   ++.+||+|||+++.....  
T Consensus       131 ~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--  204 (349)
T 2w4o_A          131 TGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--  204 (349)
T ss_dssp             CSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcc--
Confidence            99999999854 456899999999999999999999877   999999999999975   889999999999876432  


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                      .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....    .....+.+....   ..........
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~i~~~~---~~~~~~~~~~  277 (349)
T 2w4o_A          205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG----DQFMFRRILNCE---YYFISPWWDE  277 (349)
T ss_dssp             --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC----HHHHHHHHHTTC---CCCCTTTTTT
T ss_pred             cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc----cHHHHHHHHhCC---CccCCchhhh
Confidence            223446799999999999999999999999999999999999999964332    222222222221   1112233445


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ++.++.+++.+|+   ..||++|||+.|++++
T Consensus       278 ~~~~~~~li~~~L---~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          278 VSLNAKDLVRKLI---VLDPKKRLTTFQALQH  306 (349)
T ss_dssp             SCHHHHHHHHTTS---CSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHc---cCChhhCcCHHHHhcC
Confidence            6777666666555   5589999999999874


No 81 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=3.8e-41  Score=342.43  Aligned_cols=268  Identities=24%  Similarity=0.368  Sum_probs=213.3

Q ss_pred             hHHHHHhhcCCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCcc---hHHHHHHHHHhcccC-CCCceeeee
Q 040363          249 AIKEVYSATNNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISDG---YVDTFVREVRSLSHV-QHPNLVALL  318 (548)
Q Consensus       249 ~~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~~---~~~~~~~E~~il~~l-~hpnIv~l~  318 (548)
                      ...+.....++|++.+.||+|+||.||+|..      .+++.||+|.+....   ..+.+.+|+.++..+ +||||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            3344455668999999999999999999984      346899999986542   345788999999999 799999999


Q ss_pred             cccccCC-ceEEEEEecCCCChhHHhhhccC---------------cchHHHHHHHHHHHHHHHHHhhhCCCCceEeccc
Q 040363          319 SYCEDHN-ESFLVYELCHNGNLSEWLYGKAG---------------VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDI  382 (548)
Q Consensus       319 ~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~Dl  382 (548)
                      +++...+ ..++||||+++++|.+++.....               .+++..++.++.|++.||.|||+.+   |+||||
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~di  174 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL  174 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccC
Confidence            9987654 58999999999999999965433               2899999999999999999999887   999999


Q ss_pred             CCCCeeEcCCCCEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCC
Q 040363          383 KPTNILINADFQAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLG  460 (548)
Q Consensus       383 Kp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~  460 (548)
                      ||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus       175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  254 (316)
T 2xir_A          175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  254 (316)
T ss_dssp             SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence            99999999999999999999987654332 22334568899999999999999999999999999999998 99998644


Q ss_pred             CCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          461 DNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       461 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      ...    ......+....      ....+...+++..+++.+++   ..+|.+|||+.|++++|+++++.+.
T Consensus       255 ~~~----~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~~L~~~~~~~~  313 (316)
T 2xir_A          255 KID----EEFCRRLKEGT------RMRAPDYTTPEMYQTMLDCW---HGEPSQRPTFSELVEHLGNLLQANA  313 (316)
T ss_dssp             CCS----HHHHHHHHHTC------CCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             chh----HHHHHHhccCc------cCCCCCCCCHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHhhhc
Confidence            321    22222222221      12233456766666555544   4489999999999999999997654


No 82 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=9e-41  Score=335.55  Aligned_cols=253  Identities=27%  Similarity=0.420  Sum_probs=202.4

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcch---------HHHHHHHHHhcccCCCCceeeeecccccCCc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGY---------VDTFVREVRSLSHVQHPNLVALLSYCEDHNE  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~---------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~  326 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++.....         .+.+.+|+.+++.++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            37899999999999999999996 5789999999843211         167899999999999999999999987665 


Q ss_pred             eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC-----EEEEecc
Q 040363          327 SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ-----AKLSDFG  401 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~-----~kL~DFG  401 (548)
                       ++||||+++++|.+++......+++..++.++.|++.||.|||+.+ .+|+||||||+|||++.++.     +||+|||
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence             6999999999999999777778999999999999999999999532 12999999999999988776     9999999


Q ss_pred             CcccccCCCCcccccccCCCCccCcccc--cCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC
Q 040363          402 LSKVMDIGQSYVSSEVRGTFGYVDPEYR--RNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN  479 (548)
Q Consensus       402 la~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~  479 (548)
                      +++....    ......||+.|+|||.+  ....++.++||||||+++|||++|+.||.......   ..........  
T Consensus       175 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~--  245 (287)
T 4f0f_A          175 LSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMIREE--  245 (287)
T ss_dssp             TCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---HHHHHHHHHS--
T ss_pred             ccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---HHHHHHHhcc--
Confidence            9975432    23446799999999998  45567899999999999999999999996443221   1112222221  


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHh
Q 040363          480 IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKA  527 (548)
Q Consensus       480 ~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~  527 (548)
                         ...+.++..++++..+++.+|+   ..||++|||++|+++.|+++
T Consensus       246 ---~~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          246 ---GLRPTIPEDCPPRLRNVIELCW---SGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             ---CCCCCCCTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHTC
T ss_pred             ---CCCCCCCcccCHHHHHHHHHHh---cCChhhCcCHHHHHHHHHhC
Confidence               1233445566777666555554   45899999999999999864


No 83 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=9.5e-41  Score=347.10  Aligned_cols=243  Identities=21%  Similarity=0.276  Sum_probs=206.9

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.+.||+|+||.||++..+ +|+.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            68999999999999999999964 6899999998533     34567889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++|+|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....  
T Consensus       121 e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC--
Confidence            99999999999954 356899999999999999999999887   999999999999999999999999999876432  


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                        .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+..+       ...++..
T Consensus       195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~-------~~~~p~~  260 (350)
T 1rdq_E          195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIVSG-------KVRFPSH  260 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCCCTT
T ss_pred             --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHHHHHcC-------CCCCCCC
Confidence              234679999999999999999999999999999999999999996432     23333333332       1234456


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCC-----HHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPS-----MEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT-----~~evl~~  523 (548)
                      ++.++.+++.+|+   ..||++||+     ++|+++|
T Consensus       261 ~~~~~~~li~~lL---~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          261 FSSDLKDLLRNLL---QVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             CCHHHHHHHHHHS---CSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCHHHHHHHHHHh---hcCHHhccCCccCCHHHHHhC
Confidence            7888888777776   669999998     8888764


No 84 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=3.8e-41  Score=338.14  Aligned_cols=262  Identities=24%  Similarity=0.373  Sum_probs=217.5

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      ..++|++.+.||+|+||.||+|... +++.||+|.+..+ ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            3578999999999999999999975 4889999998654 3457899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc
Q 040363          334 CHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       334 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~  412 (548)
                      +++++|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.........
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence            9999999999653 346899999999999999999999887   999999999999999999999999999887655444


Q ss_pred             ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          413 VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                      ......+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||.....     ......+...      .....+..
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~~~~~~~~~------~~~~~~~~  236 (288)
T 3kfa_A          168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKD------YRMERPEG  236 (288)
T ss_dssp             EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTT------CCCCCCTT
T ss_pred             cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcc------CCCCCCCC
Confidence            4455567889999999999999999999999999999999 9999864331     1222222221      12233455


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCC
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTS  534 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~  534 (548)
                      ++++..+++.+|+   ..||++|||+.|+++.|+++++.....
T Consensus       237 ~~~~l~~li~~~l---~~dp~~Rps~~~~~~~l~~~~~~~~~~  276 (288)
T 3kfa_A          237 CPEKVYELMRACW---QWNPSDRPSFAEIHQAFETMFQESSIS  276 (288)
T ss_dssp             CCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh---CCChhhCcCHHHHHHHHHHHHHhcccc
Confidence            6777666666555   558999999999999999998776543


No 85 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=5.9e-41  Score=350.10  Aligned_cols=250  Identities=24%  Similarity=0.327  Sum_probs=205.7

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||++..+ +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            467999999999999999999964 6899999998543    34467889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC---CEEEEeccCcccccC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF---QAKLSDFGLSKVMDI  408 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~---~~kL~DFGla~~~~~  408 (548)
                      ||+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++   .+||+|||++.....
T Consensus       108 e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          108 DLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             CCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             ecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            99999999999853 457899999999999999999999887   99999999999998654   599999999987653


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      ..  ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...+     ...+...+..+. .  ......
T Consensus       184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~~~~~~~i~~~~-~--~~~~~~  253 (362)
T 2bdw_A          184 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGA-Y--DYPSPE  253 (362)
T ss_dssp             CC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC-C--CCCTTG
T ss_pred             Cc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCC-C--CCCccc
Confidence            32  2345679999999999999999999999999999999999999996432     223333333221 1  111222


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +..+++++.+++.+|+   ..||++|||+.|++++
T Consensus       254 ~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          254 WDTVTPEAKSLIDSML---TVNPKKRITADQALKV  285 (362)
T ss_dssp             GGGSCHHHHHHHHHHS---CSSGGGSCCHHHHTTS
T ss_pred             ccCCCHHHHHHHHHHc---CCChhhCcCHHHHhcC
Confidence            3456788777777766   6699999999999876


No 86 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.2e-41  Score=341.98  Aligned_cols=261  Identities=23%  Similarity=0.340  Sum_probs=201.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CC-------cEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NG-------QQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNE  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g-------~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~  326 (548)
                      .++|.+.+.||+|+||.||+|... ++       ..||+|.+...  ...+.+.+|+.+++.++||||+++++++.+++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            368999999999999999999954 33       47999998543  445789999999999999999999999999999


Q ss_pred             eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC--------EEEE
Q 040363          327 SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ--------AKLS  398 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~--------~kL~  398 (548)
                      .++||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.        +||+
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeec
Confidence            99999999999999999776666999999999999999999999887   999999999999998887        9999


Q ss_pred             eccCcccccCCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc
Q 040363          399 DFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG  477 (548)
Q Consensus       399 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~  477 (548)
                      |||++......     ....||+.|+|||.+.+ ..++.++||||||+++|||++|..|+....    ............
T Consensus       164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~~~~~~  234 (289)
T 4fvq_A          164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----DSQRKLQFYEDR  234 (289)
T ss_dssp             CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----CHHHHHHHHHTT
T ss_pred             cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----chHHHHHHhhcc
Confidence            99998754321     23457899999999887 779999999999999999999665543222    222222222221


Q ss_pred             CCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCccc
Q 040363          478 GNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRSH  540 (548)
Q Consensus       478 ~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~  540 (548)
                              +.++...+++..+++.+|+   ..||++|||+.|++++|++++...-+.....+|
T Consensus       235 --------~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~~l~~l~~p~~~~~~~~~~  286 (289)
T 4fvq_A          235 --------HQLPAPKAAELANLINNCM---DYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHH  286 (289)
T ss_dssp             --------CCCCCCSSCTTHHHHHHHS---CSSGGGSCCHHHHHHHHHTCC------------
T ss_pred             --------CCCCCCCCHHHHHHHHHHc---CCChhHCcCHHHHHHHHHHhcCCCCCCCCcccc
Confidence                    2223334555555554444   448999999999999999998655544444333


No 87 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=5.4e-41  Score=334.05  Aligned_cols=252  Identities=28%  Similarity=0.363  Sum_probs=194.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc------chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD------GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|.. +++.||+|++...      ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            46899999999999999999997 5899999998532      2346789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC--------CCCEEEEeccC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA--------DFQAKLSDFGL  402 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~--------~~~~kL~DFGl  402 (548)
                      |||+++++|.+++.  ...+++..++.++.|++.||.|||+.+..+|+||||||+||+++.        ++.+||+|||+
T Consensus        85 ~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~  162 (271)
T 3dtc_A           85 MEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL  162 (271)
T ss_dssp             EECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred             EEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence            99999999999983  457899999999999999999999766445889999999999986        67899999999


Q ss_pred             cccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccc
Q 040363          403 SKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAK  482 (548)
Q Consensus       403 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  482 (548)
                      ++......   .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     ............    
T Consensus       163 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~----  230 (271)
T 3dtc_A          163 AREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYGVAMNK----  230 (271)
T ss_dssp             ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHTSC----
T ss_pred             cccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHhhhcCC----
Confidence            98665332   224578999999999999999999999999999999999999996432     222222222211    


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHh
Q 040363          483 FADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKA  527 (548)
Q Consensus       483 ~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~  527 (548)
                       .....+...+++..+++.+++   ..+|++|||+.|++++|+++
T Consensus       231 -~~~~~~~~~~~~~~~li~~~l---~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          231 -LALPIPSTCPEPFAKLMEDCW---NPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHC-
T ss_pred             -CCCCCCcccCHHHHHHHHHHh---cCCcccCcCHHHHHHHHhcC
Confidence             122334456666555555544   44899999999999999853


No 88 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=8.9e-41  Score=347.75  Aligned_cols=248  Identities=25%  Similarity=0.319  Sum_probs=207.7

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccC-CCCceeeeecccccCCceE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~  328 (548)
                      ..++|++.+.||+|+||.||++..+ +++.||+|++...     ...+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3578999999999999999999975 4889999998543     3456788999999988 7999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++|+|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        98 lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            99999999999999954 357999999999999999999999887   99999999999999999999999999986432


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      . ........||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+...       ...+
T Consensus       174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~-------~~~~  240 (353)
T 2i0e_A          174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEH-------NVAY  240 (353)
T ss_dssp             T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCC
T ss_pred             C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhC-------CCCC
Confidence            2 223455789999999999999999999999999999999999999996432     23333333332       1234


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCC-----HHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPS-----MEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT-----~~evl~~  523 (548)
                      +..+++++.+++.+|+   ..||++||+     ++++++|
T Consensus       241 p~~~s~~~~~li~~lL---~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          241 PKSMSKEAVAICKGLM---TKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             CTTSCHHHHHHHHHHT---CSCTTSCTTCSTTHHHHHHTS
T ss_pred             CCCCCHHHHHHHHHHh---hcCHHHcCCCCCCCHHHHhcC
Confidence            4567888888888887   679999995     6788765


No 89 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=6.3e-41  Score=335.89  Aligned_cols=258  Identities=24%  Similarity=0.407  Sum_probs=205.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEcC----CcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSN----GQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~----g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+|...+    +..||+|.+...   ...+.+.+|+.+++.++||||+++++++.++ ..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence            4689999999999999999998543    346999998654   3456789999999999999999999998654 5689


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++......+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++......
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  166 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE  166 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred             EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence            99999999999999776677999999999999999999999887   999999999999999999999999999876644


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......     .....+.....      +..
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~------~~~  235 (281)
T 3cc6_A          167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDR------LPK  235 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCC------CCC
T ss_pred             cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCC------CCC
Confidence            4333444567889999999998999999999999999999998 99998643321     12222222211      222


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      +..++++..+++.+++   ..+|++|||+.|++++|+++++..+
T Consensus       236 ~~~~~~~l~~li~~~l---~~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          236 PDLCPPVLYTLMTRCW---DYDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             CTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHc---cCCchhCcCHHHHHHHHHHHHHhhh
Confidence            3446666555555544   4589999999999999999987543


No 90 
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=340.45  Aligned_cols=266  Identities=24%  Similarity=0.393  Sum_probs=198.2

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHH--HHHHhcccCCCCceeeeecc-----cccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFV--REVRSLSHVQHPNLVALLSY-----CEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~--~E~~il~~l~hpnIv~l~~~-----~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+|+. +++.||||++..... +.+.  .|+..+..++||||+++++.     .......++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR-QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch-hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            47899999999999999999987 789999999864432 2333  44555666899999999873     334456789


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhC---------CCCceEecccCCCCeeEcCCCCEEEEec
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTY---------PEGCIIHRDIKPTNILINADFQAKLSDF  400 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~---------~~~~IvH~DlKp~NILl~~~~~~kL~DF  400 (548)
                      ||||+++|+|.+++..  ...++..+..++.|++.||.|||+.         +   |+||||||+|||++.++.+||+||
T Consensus        90 v~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSL--HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEecCCCCcHHHHHhh--cccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeec
Confidence            9999999999999943  3458889999999999999999977         5   999999999999999999999999


Q ss_pred             cCcccccCCC-------CcccccccCCCCccCcccccC-------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 040363          401 GLSKVMDIGQ-------SYVSSEVRGTFGYVDPEYRRN-------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPM-  465 (548)
Q Consensus       401 Gla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~-  465 (548)
                      |+++.+....       ........||+.|+|||++.+       ..++.++||||||+++|||++|+.||........ 
T Consensus       165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  244 (336)
T 3g2f_A          165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY  244 (336)
T ss_dssp             TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred             cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence            9998765322       112234579999999999876       5677899999999999999999887754432211 


Q ss_pred             ------------cHHHHHHHHHhcCCcccccCCCCCCCC--CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          466 ------------PLDKMAKFVMRGGNIAKFADPTINGEY--SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       466 ------------~~~~~~~~~~~~~~~~~~~d~~l~~~~--s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                                  ....+.........     .+.++...  .....+.+.+++..|+. ||++|||++|+++.|+++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          245 QMAFQTEVGNHPTFEDMQVLVSREKQ-----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCC-----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhhhcccCCCchHHHHHhhhccccc-----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence                        11111111111111     11222111  12344456777777776 899999999999999999876


Q ss_pred             hcCC
Q 040363          531 SKTS  534 (548)
Q Consensus       531 ~~~~  534 (548)
                      ....
T Consensus       320 ~~~~  323 (336)
T 3g2f_A          320 WERN  323 (336)
T ss_dssp             CCC-
T ss_pred             HHhc
Confidence            6553


No 91 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-40  Score=333.77  Aligned_cols=264  Identities=24%  Similarity=0.376  Sum_probs=213.7

Q ss_pred             cCCcccee-eeeecCceEEEEEEEc---CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASN-YIGQGVAGKVYKGILS---NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~-~LG~G~fg~Vy~a~~~---~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|.+.+ .||+|+||.||+|...   +++.||+|.+...   ...+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            35677776 9999999999999853   6788999999653   3456789999999999999999999998 4567899


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++......
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  163 (287)
T ss_dssp             EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence            99999999999999766778999999999999999999999887   999999999999999999999999999877543


Q ss_pred             CCcc--cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          410 QSYV--SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       410 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ....  .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....     ......+....      .+
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~i~~~~------~~  232 (287)
T 1u59_A          164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGK------RM  232 (287)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTC------CC
T ss_pred             cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHhcCC------cC
Confidence            3221  233457899999999998899999999999999999998 9999964332     22333333321      22


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCc
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYR  538 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~  538 (548)
                      ..+..++++..+++.+|+   ..+|++|||+.+++++|++++..........
T Consensus       233 ~~~~~~~~~l~~li~~~l---~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~  281 (287)
T 1u59_A          233 ECPPECPPELYALMSDCW---IYKWEDRPDFLTVEQRMRACYYSLASKVEGH  281 (287)
T ss_dssp             CCCTTCCHHHHHHHHHTT---CSSGGGSCCHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             CCCCCcCHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHHhcCCcccCC
Confidence            334456766555544443   3489999999999999999998877755443


No 92 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=1.8e-40  Score=356.42  Aligned_cols=253  Identities=27%  Similarity=0.392  Sum_probs=207.5

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecccccCC-ceEEEEEe
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCEDHN-ESFLVYEL  333 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~~lV~E~  333 (548)
                      ...++|++.+.||+|+||.||+|.. +++.||||.+..+...+.+.+|+.+++.++||||+++++++.+.+ ..++||||
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            3457899999999999999999998 478999999987777788999999999999999999999976654 78999999


Q ss_pred             cCCCChhHHhhhccC-cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc
Q 040363          334 CHNGNLSEWLYGKAG-VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~  412 (548)
                      +++|+|.+++..... .+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....   
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---  342 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  342 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence            999999999966543 4789999999999999999999877   999999999999999999999999999864322   


Q ss_pred             ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          413 VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                       .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......     .....+..+.      ....+..
T Consensus       343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~------~~~~p~~  410 (450)
T 1k9a_A          343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGY------KMDAPDG  410 (450)
T ss_dssp             -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHHHTTC------CCCCCTT
T ss_pred             -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCC------CCCCCCc
Confidence             122357889999999999999999999999999999998 99999654322     1222233221      1223345


Q ss_pred             CCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          492 YSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      .+++..+    ++..|+. +|++|||+.++++.|+++...
T Consensus       411 ~~~~l~~----li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          411 CPPAVYD----VMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             CCHHHHH----HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCHHHHH----HHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            6666554    5555665 899999999999999998753


No 93 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.3e-40  Score=335.50  Aligned_cols=258  Identities=26%  Similarity=0.424  Sum_probs=195.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|++.++||+|+||.||+|...  ..||+|++...    ...+.+.+|+.+++.++||||++++++. ..+..++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            478999999999999999999853  35999998532    3456789999999999999999999965 4567899999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC-C
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ-S  411 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~-~  411 (548)
                      |+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++....... .
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A          100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccccccc
Confidence            99999999999777778999999999999999999999887   9999999999999999999999999998654322 2


Q ss_pred             cccccccCCCCccCccccc---CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRR---NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .......||+.|+|||.+.   +..++.++||||||+++|+|++|+.||....    ....+........ ... .....
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~-~~~-~~~~~  250 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN----NRDQIIEMVGRGS-LSP-DLSKV  250 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC----CHHHHHHHHHHTS-CCC-CTTSS
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc----hHHHHHHHhcccc-cCc-chhhc
Confidence            2234467999999999886   6678999999999999999999999996433    2333333333322 111 11233


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhh
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALD  529 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~  529 (548)
                      ...++++..+++.+++   ..+|++|||+.|+++.|+++.+
T Consensus       251 ~~~~~~~l~~li~~~l---~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          251 RSNCPKRMKRLMAECL---KKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             CTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHTTC
T ss_pred             cccCCHHHHHHHHHHc---cCChhhCCCHHHHHHHHHHHhh
Confidence            4456766666555554   4589999999999999999864


No 94 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=7.2e-41  Score=349.25  Aligned_cols=252  Identities=22%  Similarity=0.243  Sum_probs=195.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||++... +++.||+|++... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            468999999999999999999965 7899999998643 33467889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC--EEEEeccCcccccCCCCc
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ--AKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~--~kL~DFGla~~~~~~~~~  412 (548)
                      ++|+|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.  +||+|||+++.....  .
T Consensus        99 ~~~~L~~~l~~-~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~  172 (361)
T 3uc3_A           99 SGGELYERICN-AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--S  172 (361)
T ss_dssp             CSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc--C
Confidence            99999999854 457999999999999999999999887   999999999999987765  999999999754322  2


Q ss_pred             ccccccCCCCccCcccccCCCCCcc-ccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          413 VSSEVRGTFGYVDPEYRRNHHVSTS-GDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~~~~~~k-sDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                      ......||+.|+|||++.+..++.+ +||||||+++|+|++|+.||........ .....+.+....     ........
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~  246 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVK-----YSIPDDIR  246 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTC-----CCCCTTSC
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCC-----CCCCCcCC
Confidence            2334579999999999988887655 9999999999999999999975543333 333333322211     01111224


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +++++.+++.+|+   ..+|++|||+.|+++|
T Consensus       247 ~s~~~~~li~~~L---~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          247 ISPECCHLISRIF---VADPATRISIPEIKTH  275 (361)
T ss_dssp             CCHHHHHHHHHHS---CSCTTTSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHc---cCChhHCcCHHHHHhC
Confidence            6777777777666   5689999999999986


No 95 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=7.1e-41  Score=358.86  Aligned_cols=248  Identities=23%  Similarity=0.302  Sum_probs=198.6

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ..++|++.++||+|+||.||++.. .+|+.||||++...     .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346899999999999999999995 46899999998532     334567899999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhh-CCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHT-YPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      ||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+   |+||||||+|||++.++.+||+|||+++....
T Consensus       226 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  301 (446)
T 4ejn_A          226 VMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  301 (446)
T ss_dssp             EECCCSSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred             EEeeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence            9999999999999854 4678999999999999999999997 77   99999999999999999999999999986432


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      . ........||+.|+|||++.+..++.++||||||+++|||++|+.||...+     .......+...       ...+
T Consensus       302 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~-------~~~~  368 (446)
T 4ejn_A          302 D-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILME-------EIRF  368 (446)
T ss_dssp             ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-------CCCC
T ss_pred             C-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHHhC-------CCCC
Confidence            2 223345789999999999999999999999999999999999999995432     23333333322       1234


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCC-----CHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRP-----SMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RP-----T~~evl~~  523 (548)
                      +..+++++.+++.+|+   ..||++||     |++|+++|
T Consensus       369 p~~~~~~~~~li~~~L---~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          369 PRTLGPEAKSLLSGLL---KKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             CTTSCHHHHHHHHHHT---CSSTTTSTTCSTTTHHHHHTS
T ss_pred             CccCCHHHHHHHHHHc---ccCHHHhCCCCCCCHHHHHhC
Confidence            4567888888777776   66999999     99999874


No 96 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=5e-41  Score=351.14  Aligned_cols=259  Identities=24%  Similarity=0.346  Sum_probs=209.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEc------CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS------NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      .++|++.+.||+|+||.||+|...      +++.||||++...   ....++.+|+.+++.++||||+++++++.+....
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            368999999999999999999842      4678999998543   3445788999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC---CEEEE
Q 040363          328 FLVYELCHNGNLSEWLYGKA------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF---QAKLS  398 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~---~~kL~  398 (548)
                      ++||||+++|+|.+++....      ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999996543      35899999999999999999999887   99999999999999655   49999


Q ss_pred             eccCcccccCCC-CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHh
Q 040363          399 DFGLSKVMDIGQ-SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMR  476 (548)
Q Consensus       399 DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~  476 (548)
                      |||+++...... ........||+.|+|||++.+..++.++||||||+++|||++ |+.||....     .....+.+..
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-----~~~~~~~i~~  301 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLEFVTS  301 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHT
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHc
Confidence            999998653222 222334568999999999999999999999999999999998 999986432     3344444433


Q ss_pred             cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          477 GGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       477 ~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ...      +..+...+.+..+    ++..|+. +|++|||+.+|+++|+.+.+....
T Consensus       302 ~~~------~~~~~~~~~~l~~----li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~  349 (367)
T 3l9p_A          302 GGR------MDPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQDPDV  349 (367)
T ss_dssp             TCC------CCCCTTCCHHHHH----HHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred             CCC------CCCCccCCHHHHH----HHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence            321      2223455666555    5555555 899999999999999998765543


No 97 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1.4e-40  Score=330.04  Aligned_cols=252  Identities=24%  Similarity=0.310  Sum_probs=203.8

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccC--CceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDH--NESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|.. +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.  +..++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            36899999999999999999998 5899999998543    3356789999999999999999999998877  778999


Q ss_pred             EEecCCCChhHHhhhccC-cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          331 YELCHNGNLSEWLYGKAG-VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      |||+++++|.+++..... .+++..++.++.|++.||.|||+.+ ..|+||||||+||+++.++.++|.|||++....  
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--  164 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--  164 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec--
Confidence            999999999999965443 5899999999999999999999532 229999999999999999999999999876432  


Q ss_pred             CCcccccccCCCCccCcccccCCCCCc---cccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVST---SGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                          .....||+.|+|||.+.+..++.   ++||||||+++|||++|+.||....     ...........+     ..+
T Consensus       165 ----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~-----~~~  230 (271)
T 3kmu_A          165 ----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEG-----LRP  230 (271)
T ss_dssp             ----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSC-----CCC
T ss_pred             ----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcC-----CCC
Confidence                22346899999999988765544   8999999999999999999996332     222222222222     223


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhh
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALD  529 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~  529 (548)
                      .++..++++..+++.+++   ..||++|||++|+++.|+++.+
T Consensus       231 ~~~~~~~~~~~~li~~~l---~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          231 TIPPGISPHVSKLMKICM---NEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             CCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CCCCCCCHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHhhc
Confidence            445567777666666554   4589999999999999998864


No 98 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=9.5e-41  Score=341.53  Aligned_cols=255  Identities=26%  Similarity=0.372  Sum_probs=188.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++...   ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46899999999999999999995 46899999998533   334678899999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhcc-----CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          333 LCHNGNLSEWLYGKA-----GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      |++ ++|.+++....     ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 59999885432     35889999999999999999999877   9999999999999999999999999998765


Q ss_pred             CCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcc-----
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIA-----  481 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----  481 (548)
                      .... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.....    ...........+...     
T Consensus       160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND----EEQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCSCCTTTCG
T ss_pred             CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCChhHhh
Confidence            3322 2234578999999999876 4689999999999999999999999964431    111111111111000     


Q ss_pred             ---------------------cccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          482 ---------------------KFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       482 ---------------------~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                           ....+.....++.+..+++.+|+   ..||++|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L---~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL---QLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHS---CSSGGGSCCHHHHTTS
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHC---CCCcccCCCHHHHhCC
Confidence                                 00111222356777777777766   5699999999999875


No 99 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=349.82  Aligned_cols=247  Identities=24%  Similarity=0.307  Sum_probs=205.5

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.+.||+|+||.||++... +++.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            68999999999999999999964 5889999998533     34567889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+.+|+|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....  
T Consensus        95 e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--  168 (384)
T 4fr4_A           95 DLLLGGDLRYHLQ-QNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--  168 (384)
T ss_dssp             CCCTTEEHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred             ecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence            9999999999995 4467999999999999999999999887   999999999999999999999999999876533  


Q ss_pred             cccccccCCCCccCcccccC---CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRN---HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~---~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .......||+.|+|||++..   ..++.++||||||+++|||++|+.||......  ........+...       ....
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~~~-------~~~~  239 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFETT-------VVTY  239 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHHHC-------CCCC
T ss_pred             CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhhc-------ccCC
Confidence            23355789999999999864   46899999999999999999999999644322  233333333221       2334


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCC-HHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPS-MEQVVL  522 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT-~~evl~  522 (548)
                      +..++.++.+++.+|+   ..+|++||+ ++++++
T Consensus       240 p~~~s~~~~~li~~lL---~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          240 PSAWSQEMVSLLKKLL---EPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CTTSCHHHHHHHHHHS---CSSGGGSCCSHHHHHT
T ss_pred             CCcCCHHHHHHHHHHh---cCCHhHhcccHHHHHc
Confidence            4567888878777776   669999999 777765


No 100
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=8.4e-41  Score=352.19  Aligned_cols=251  Identities=23%  Similarity=0.279  Sum_probs=207.2

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|++.+.||+|+||.||+|..+ +++.||+|.+...  .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            368999999999999999999964 6899999998654  2345788999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC--CCCEEEEeccCcccccCCCC
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA--DFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~--~~~~kL~DFGla~~~~~~~~  411 (548)
                      +++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.  ++.+||+|||+++...... 
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-  205 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-  205 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence            9999999999766668999999999999999999999887   999999999999974  4679999999998765332 


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                       ......||+.|+|||++.+..++.++||||||+++|||++|+.||....     .......+....   ...++.....
T Consensus       206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~i~~~~---~~~~~~~~~~  276 (387)
T 1kob_A          206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----DLETLQNVKRCD---WEFDEDAFSS  276 (387)
T ss_dssp             -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHCC---CCCCSSTTTT
T ss_pred             -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC---CCCCcccccc
Confidence             2234579999999999999999999999999999999999999996432     222222222221   1123334456


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +++++.+++.+|+   ..||++|||+.|++++
T Consensus       277 ~s~~~~~li~~~L---~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          277 VSPEAKDFIKNLL---QKEPRKRLTVHDALEH  305 (387)
T ss_dssp             SCHHHHHHHHTTS---CSSGGGSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHc---CCChhHCcCHHHHhhC
Confidence            7777777666665   5589999999999975


No 101
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.3e-40  Score=342.37  Aligned_cols=247  Identities=24%  Similarity=0.286  Sum_probs=196.7

Q ss_pred             cCCccceeeeeecCceEEEEEEE----cCCcEEEEEEecCc------chHHHHHHHHHhcccCCCCceeeeecccccCCc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL----SNGQQVAVKHIISD------GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNE  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~----~~g~~vAvK~i~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~  326 (548)
                      .++|++.+.||+|+||.||++..    .+++.||+|++...      .....+.+|+.+++.++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46899999999999999999996    47899999998643      234567889999999999999999999999999


Q ss_pred             eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          327 SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      .++||||+++++|.+++.. .+.+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        96 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             EEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            9999999999999999954 456889999999999999999999887   999999999999999999999999999764


Q ss_pred             cCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          407 DIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       407 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      .... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...+     .......+...       ..
T Consensus       172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~-------~~  238 (327)
T 3a62_A          172 IHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----RKKTIDKILKC-------KL  238 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHT-------CC
T ss_pred             ccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhC-------CC
Confidence            3222 22345679999999999999999999999999999999999999996432     22333333322       12


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCC-----CHHHHHHH
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRP-----SMEQVVLR  523 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RP-----T~~evl~~  523 (548)
                      .++..++.++.+++.+|+   ..+|++||     ++.|+++|
T Consensus       239 ~~p~~~~~~~~~li~~~L---~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          239 NLPPYLTQEARDLLKKLL---KRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             CCCTTSCHHHHHHHHHHS---CSCGGGSTTSSTTTHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHH---hcCHhhccCCCCCCHHHHHcC
Confidence            344567788777777776   66899999     78888764


No 102
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=332.76  Aligned_cols=248  Identities=28%  Similarity=0.475  Sum_probs=184.9

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|.+...     ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46899999999999999999996 57999999998533     2346789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            9999999999999766678999999999999999999999877   9999999999999999999999999998765322


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      . ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .       .. .   ...+...+.
T Consensus       167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~-------~~-~---~~~~~~~~~  233 (278)
T 3cok_A          167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L-------NK-V---VLADYEMPS  233 (278)
T ss_dssp             --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------C---CSSCCCCCT
T ss_pred             C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H-------HH-H---hhcccCCcc
Confidence            2 22345789999999999999999999999999999999999999965442211 0       00 0   011223445


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++.+..+++.+|+   ..||++|||+++++++
T Consensus       234 ~~~~~~~~li~~~l---~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          234 FLSIEAKDLIHQLL---RRNPADRLSLSSVLDH  263 (278)
T ss_dssp             TSCHHHHHHHHHHS---CSSGGGSCCHHHHTTS
T ss_pred             ccCHHHHHHHHHHc---ccCHhhCCCHHHHhcC
Confidence            56777776666665   5589999999999863


No 103
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=2.5e-40  Score=334.14  Aligned_cols=260  Identities=21%  Similarity=0.339  Sum_probs=202.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEcC----CcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeeccc-ccCCceE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSN----GQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYC-EDHNESF  328 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~----g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~~~  328 (548)
                      ..+|++.++||+|+||.||+|...+    ...+|+|.+...   ...+.+.+|+.+++.++||||+++++++ ..++..+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            3578999999999999999998532    236899988543   3456789999999999999999999985 5566789


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++....
T Consensus       104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence            999999999999999776777899999999999999999999887   99999999999999999999999999987643


Q ss_pred             CCC---cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCC-CCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          409 GQS---YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQ-RVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       409 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ...   .......+|+.|+|||.+.+..++.++||||||+++|+|++|. +||.... .....    .......      
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~~~----~~~~~~~------  249 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDIT----VYLLQGR------  249 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-TTTHH----HHHHTTC------
T ss_pred             cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-HHHHH----HHHhcCC------
Confidence            321   1223456788999999999999999999999999999999955 4553322 22211    1112211      


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      .+..+..++.+..+++.+++   ..+|++|||+.|+++.|+++++....
T Consensus       250 ~~~~~~~~~~~l~~li~~~l---~~~p~~Rps~~ell~~L~~~~~~~~~  295 (298)
T 3f66_A          250 RLLQPEYCPDPLYEVMLKCW---HPKAEMRPSFSELVSRISAIFSTFIG  295 (298)
T ss_dssp             CCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred             CCCCCccCCHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            12223445666555555444   44899999999999999999875443


No 104
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=3.6e-40  Score=339.33  Aligned_cols=261  Identities=23%  Similarity=0.413  Sum_probs=210.0

Q ss_pred             cCCccceeeeeecCceEEEEEEE--------cCCcEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL--------SNGQQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDH  324 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~--------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~  324 (548)
                      .++|++.+.||+|+||.||+|..        .+++.||+|++...   ...+.+.+|+.+++.+ +||||+++++++.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            47899999999999999999986        35678999998644   3356788999999999 899999999999999


Q ss_pred             CceEEEEEecCCCChhHHhhhcc---------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE
Q 040363          325 NESFLVYELCHNGNLSEWLYGKA---------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl  389 (548)
                      +..++||||+++++|.+++....               ..+++..++.++.|++.||.|||+.+   |+||||||+||++
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence            99999999999999999996543               24889999999999999999999887   9999999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcH
Q 040363          390 NADFQAKLSDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPL  467 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~  467 (548)
                      +.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...     ..
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~  265 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PV  265 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-----CH
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-----CH
Confidence            99999999999999876543322 2234467889999999988899999999999999999999 99998543     23


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCC
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTS  534 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~  534 (548)
                      ..+...+....      .+..+..++.+..+++.+++   ..+|.+|||+.|++++|++++......
T Consensus       266 ~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~~L~~l~~~~~~~  323 (334)
T 2pvf_A          266 EELFKLLKEGH------RMDKPANCTNELYMMMRDCW---HAVPSQRPTFKQLVEDLDRILTLTTNE  323 (334)
T ss_dssp             HHHHHHHHHTC------CCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHhcCC------CCCCCccCCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHhccccC
Confidence            34444333322      12233456666555444443   348999999999999999999876553


No 105
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.6e-40  Score=350.73  Aligned_cols=269  Identities=22%  Similarity=0.286  Sum_probs=215.8

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCC--ceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN--ESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lV  330 (548)
                      .++|.+.++||+|+||.||+|... +++.||||++...   ...+.+.+|+++++.++||||+++++++.+.+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            367999999999999999999964 5899999998643   33567889999999999999999999987655  67999


Q ss_pred             EEecCCCChhHHhhhccC--cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE----cCCCCEEEEeccCcc
Q 040363          331 YELCHNGNLSEWLYGKAG--VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI----NADFQAKLSDFGLSK  404 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl----~~~~~~kL~DFGla~  404 (548)
                      |||+++++|.+++.....  .+++..++.++.|++.||.|||+.+   |+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999965432  3899999999999999999999887   9999999999999    777889999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccC--------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHh
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRN--------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMR  476 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~  476 (548)
                      ......  ......||+.|+|||++.+        ..++.++||||||+++|||++|+.||............+.+....
T Consensus       165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~  242 (396)
T 4eut_A          165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (396)
T ss_dssp             ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred             EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence            765332  2334679999999998765        578899999999999999999999997655444444444443332


Q ss_pred             cCC--c-----------ccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          477 GGN--I-----------AKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       477 ~~~--~-----------~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      ...  +           ....+......++....+.+..++..|+. ||++|||+.|+++.++++++.
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            110  0           00001122234567777888888888887 899999999999999999864


No 106
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.2e-40  Score=332.73  Aligned_cols=260  Identities=20%  Similarity=0.288  Sum_probs=206.2

Q ss_pred             CccceeeeeecCceEEEEEEEc-CC---cEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCce-EEE
Q 040363          259 NLSASNYIGQGVAGKVYKGILS-NG---QQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES-FLV  330 (548)
Q Consensus       259 ~y~~~~~LG~G~fg~Vy~a~~~-~g---~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~-~lV  330 (548)
                      .|...++||+|+||.||+|... ++   ..||+|.+...   ...+.+.+|+.+++.++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            4667799999999999999853 33   37999998543   3346788999999999999999999999776665 999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+.+++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++......
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            9999999999999776778999999999999999999999887   9999999999999999999999999998654322


Q ss_pred             ---CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          411 ---SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       411 ---~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                         ........+|+.|+|||.+.+..++.++||||||+++|+|++|..|+....+.    ......+....      ...
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~------~~~  248 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGR------RLP  248 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTC------CCC
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCC------CCC
Confidence               12223456889999999999999999999999999999999976665433221    12222222221      122


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCC
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTS  534 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~  534 (548)
                      .+..++++..+++.+|+   ..+|.+|||++++++.|+++++.....
T Consensus       249 ~~~~~~~~l~~li~~~l---~~~p~~Rps~~~ll~~l~~~~~~l~~~  292 (298)
T 3pls_A          249 QPEYCPDSLYQVMQQCW---EADPAVRPTFRVLVGEVEQIVSALLGD  292 (298)
T ss_dssp             CCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred             CCccchHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence            33445666655555554   458999999999999999998766543


No 107
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=7.1e-41  Score=342.30  Aligned_cols=262  Identities=22%  Similarity=0.387  Sum_probs=193.0

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEcC-Cc---EEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCc
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILSN-GQ---QVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNE  326 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~-g~---~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~  326 (548)
                      ...++|++.+.||+|+||.||+|.... ++   .||+|++...    ...+.+.+|+.+++.++||||+++++++...+.
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345789999999999999999999543 32   7999998533    345689999999999999999999999877765


Q ss_pred             e------EEEEEecCCCChhHHhhhcc-----CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCE
Q 040363          327 S------FLVYELCHNGNLSEWLYGKA-----GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQA  395 (548)
Q Consensus       327 ~------~lV~E~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~  395 (548)
                      .      ++||||+++++|.+++....     ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence            5      89999999999999985432     25899999999999999999999887   9999999999999999999


Q ss_pred             EEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHH
Q 040363          396 KLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKF  473 (548)
Q Consensus       396 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~  473 (548)
                      ||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....     ......
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~  251 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYNY  251 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHH
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHHHHH
Confidence            9999999987654332 22233457889999999999999999999999999999999 8999864332     122222


Q ss_pred             HHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          474 VMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       474 ~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      +....      .+..+..++++..+++.+|+   ..||++|||+.++++.|+++++....
T Consensus       252 ~~~~~------~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~l~~~l~~~l~~~~~  302 (323)
T 3qup_A          252 LIGGN------RLKQPPECMEEVYDLMYQCW---SADPKQRPSFTCLRMELENILGHLSV  302 (323)
T ss_dssp             HHTTC------CCCCCTTCCHHHHHHHHHTT---CSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred             HhcCC------CCCCCCccCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHHHhhh
Confidence            22221      12233456666555554444   44899999999999999999865543


No 108
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=4.6e-41  Score=343.53  Aligned_cols=248  Identities=23%  Similarity=0.366  Sum_probs=191.7

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecC---cchHHHHHHHHHhcccCCCCceeeeecccccCC-------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIIS---DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHN-------  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-------  325 (548)
                      .++|++.+.||+|+||.||+|..+ +++.||||++..   +...+.+.+|+.+++.++||||+++++++.+.+       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            357999999999999999999975 799999999853   234568999999999999999999999875443       


Q ss_pred             --------------------------------------------------ceEEEEEecCCCChhHHhhhccC--cchHH
Q 040363          326 --------------------------------------------------ESFLVYELCHNGNLSEWLYGKAG--VLSWI  353 (548)
Q Consensus       326 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~--~l~~~  353 (548)
                                                                        ..++||||+++++|.+++.....  ..++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              27899999999999999965432  34566


Q ss_pred             HHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC-----------cccccccCCCC
Q 040363          354 QRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS-----------YVSSEVRGTFG  422 (548)
Q Consensus       354 ~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~-----------~~~~~~~gt~~  422 (548)
                      .++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.......           .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            78999999999999999877   99999999999999999999999999988764321           12234579999


Q ss_pred             ccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHH
Q 040363          423 YVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFK  502 (548)
Q Consensus       423 y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~  502 (548)
                      |+|||++.+..++.++||||||+++|||++|..|+.       ........... .     ..+......+++..+++.+
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-------~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~li~~  308 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-------ERVRIITDVRN-L-----KFPLLFTQKYPQEHMMVQD  308 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-------HHHHHHHHHHT-T-----CCCHHHHHHCHHHHHHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-------HHHHHHHHhhc-c-----CCCcccccCChhHHHHHHH
Confidence            999999999999999999999999999999876541       11111111111 1     1111122334555555555


Q ss_pred             HHHHhhCCCCCCCCHHHHHHH
Q 040363          503 LALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       503 ll~~C~~dP~~RPT~~evl~~  523 (548)
                      |+   ..||++|||+.|++++
T Consensus       309 ~l---~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          309 ML---SPSPTERPEATDIIEN  326 (332)
T ss_dssp             HH---CSSGGGSCCHHHHHHS
T ss_pred             Hc---cCCCCcCCCHHHHhhc
Confidence            54   4589999999999874


No 109
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=8.8e-41  Score=343.27  Aligned_cols=254  Identities=19%  Similarity=0.368  Sum_probs=200.7

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCc----EEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQ----QVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~----~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ++|++.++||+|+||.||+|.+. +++    +||+|.+...   ...+++.+|+.+++.++||||+++++++.+.+ .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            67999999999999999999953 444    3688877432   34568999999999999999999999998754 789


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      |+||+++|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            99999999999999777778999999999999999999999887   999999999999999999999999999877544


Q ss_pred             CCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          410 QSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       410 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....     ..+...+.....      ..
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~~------~~  239 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEKGER------LP  239 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCC------CC
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHHHHHHHcCCC------CC
Confidence            322 2233457889999999999999999999999999999999 9999964332     222233332221      12


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          488 INGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      .+...+.+..+    ++.+|+. +|++|||+.|++++|+++...
T Consensus       240 ~~~~~~~~~~~----li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          240 QPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             CCTTBCHHHHH----HHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             CCccCCHHHHH----HHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            23345555444    5555665 899999999999999998754


No 110
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.5e-40  Score=357.22  Aligned_cols=258  Identities=23%  Similarity=0.380  Sum_probs=204.8

Q ss_pred             hcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      ..++|++.++||+|+||.||+|..+++..||||++... ...+.+.+|+.+++.++||||+++++++.+ +..++||||+
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            34689999999999999999999988889999999653 345689999999999999999999999876 6789999999


Q ss_pred             CCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          335 HNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       335 ~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      ++|+|.+++... ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.........
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  337 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  337 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence            999999999643 346899999999999999999999877   9999999999999999999999999998765433333


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEY  492 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  492 (548)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||....     .......+..+..      ...+...
T Consensus       338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~------~~~~~~~  406 (452)
T 1fmk_A          338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYR------MPCPPEC  406 (452)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCC------CCCCTTS
T ss_pred             ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCC------CCCCCCC
Confidence            334557889999999999999999999999999999999 999985432     2333333333211      2223445


Q ss_pred             CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          493 SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       493 s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      +++..    .++..|+. +|++|||++++++.|+++.....
T Consensus       407 ~~~l~----~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          407 PESLH----DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             CHHHH----HHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             CHHHH----HHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence            65544    45556665 89999999999999999875443


No 111
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=7.2e-41  Score=347.26  Aligned_cols=273  Identities=17%  Similarity=0.156  Sum_probs=211.8

Q ss_pred             CCccceeeeeecCceEEEEEEEc---------CCcEEEEEEecCcchHHHHHHHHHhcccCCCCceee------------
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS---------NGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVA------------  316 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~---------~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~------------  316 (548)
                      ++|++.+.||+|+||.||+|...         +++.||+|.+...   +.+.+|+++++.++||||++            
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            68999999999999999999965         3789999998654   36789999999999999998            


Q ss_pred             ---eeccccc-CCceEEEEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC
Q 040363          317 ---LLSYCED-HNESFLVYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA  391 (548)
Q Consensus       317 ---l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~  391 (548)
                         +++++.. ++..++||||+ +++|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP  194 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence               4445444 67789999999 99999999654 367999999999999999999999887   999999999999999


Q ss_pred             CC--CEEEEeccCcccccCCCCc------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCC
Q 040363          392 DF--QAKLSDFGLSKVMDIGQSY------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNR  463 (548)
Q Consensus       392 ~~--~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~  463 (548)
                      ++  .+||+|||+++.+......      ......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence            98  8999999999876533221      123457999999999999999999999999999999999999999754422


Q ss_pred             CCcHHHHHHHHHhcCCcccccCCC-CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCccccc
Q 040363          464 PMPLDKMAKFVMRGGNIAKFADPT-INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRSHRN  542 (548)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~~d~~-l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~~~  542 (548)
                      .............  ....+.+.. ....++.+..+++.+|+   ..||++|||++++++.|+++++...........|+
T Consensus       275 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~dw~  349 (352)
T 2jii_A          275 TEDIMKQKQKFVD--KPGPFVGPCGHWIRPSETLQKYLKVVM---ALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGLP  349 (352)
T ss_dssp             HHHHHHHHHHHHH--SCCCEECTTSCEECCCHHHHHHHHHHH---TCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCCCC
T ss_pred             HHHHHHHHHhccC--ChhhhhhhccccCCCcHHHHHHHHHHH---hCChhhCCCHHHHHHHHHHHHHhcCCCcCccccCc
Confidence            2222222221111  111121111 12346777777666665   56899999999999999999988776655555443


No 112
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=8.5e-41  Score=363.21  Aligned_cols=257  Identities=24%  Similarity=0.397  Sum_probs=211.7

Q ss_pred             cCCccceeeeeecCceEEEEEEEcC-CcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSN-GQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~-g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||+|.++. ++.||||.+..+ ...+.+.+|+.+|+.++||||+++++++.+.+..++||||+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            4679999999999999999999754 889999999644 35678999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          335 HNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       335 ~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      ++|+|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.........
T Consensus       299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  375 (495)
T 1opk_A          299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  375 (495)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence            999999999653 356899999999999999999999877   9999999999999999999999999998765443333


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEY  492 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  492 (548)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.....     ..+.+.+....      ....+...
T Consensus       376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~------~~~~~~~~  444 (495)
T 1opk_A          376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY------RMERPEGC  444 (495)
T ss_dssp             CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTTC------CCCCCTTC
T ss_pred             cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCC------CCCCCCCC
Confidence            344557789999999999999999999999999999999 9999864432     22222332221      12233455


Q ss_pred             CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          493 SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       493 s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      +++..+    ++.+|+. +|++|||+.++++.|+++++..
T Consensus       445 ~~~l~~----li~~cl~~dP~~RPs~~el~~~L~~~~~~~  480 (495)
T 1opk_A          445 PEKVYE----LMRACWQWNPSDRPSFAEIHQAFETMFQES  480 (495)
T ss_dssp             CHHHHH----HHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred             CHHHHH----HHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence            666554    5555665 8999999999999999987543


No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.6e-40  Score=349.32  Aligned_cols=261  Identities=18%  Similarity=0.198  Sum_probs=200.1

Q ss_pred             cCCccceeeeeec--CceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQG--VAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G--~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.++||+|  +||.||+|..+ +++.||||++...    ...+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3689999999999  99999999965 7999999998533    334678889999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          330 VYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      ||||+++++|.+++... ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||.+.....
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            99999999999999654 356899999999999999999999887   99999999999999999999999998865432


Q ss_pred             CC------CcccccccCCCCccCcccccC--CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHh----
Q 040363          409 GQ------SYVSSEVRGTFGYVDPEYRRN--HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMR----  476 (548)
Q Consensus       409 ~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~----  476 (548)
                      ..      ........||+.|+|||++.+  ..++.++||||||+++|||++|+.||............+......    
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  260 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT  260 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence            11      111233478999999999887  679999999999999999999999996544322111111000000    


Q ss_pred             ------------------------------cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          477 ------------------------------GGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       477 ------------------------------~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                                    ...............+++++.+++.+|+   ..||++|||+.|++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L---~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL---QRNPDARPSASTLLNH  334 (389)
T ss_dssp             ---------------------------------------------CCHHHHHHHHHHT---CSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHh---hcCcccCCCHHHHhcC
Confidence                                          0000000111233446667666666665   5589999999999976


No 114
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.4e-40  Score=340.52  Aligned_cols=266  Identities=24%  Similarity=0.337  Sum_probs=214.1

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhccc--CCCCceeeeecccccCC----ceE
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSH--VQHPNLVALLSYCEDHN----ESF  328 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~----~~~  328 (548)
                      ...++|++.+.||+|+||.||+|.. +++.||+|.+... ..+.+.+|.+++..  ++||||+++++++...+    ..+
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~  116 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW  116 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence            3456899999999999999999998 6899999998644 34567888888877  68999999999987775    789


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhh--------hCCCCceEecccCCCCeeEcCCCCEEEEec
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLH--------TYPEGCIIHRDIKPTNILINADFQAKLSDF  400 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~IvH~DlKp~NILl~~~~~~kL~DF  400 (548)
                      +||||+++|+|.+++..  ..+++..++.++.|++.||.|||        +.+   |+||||||+|||++.++.+||+||
T Consensus       117 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Df  191 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADL  191 (342)
T ss_dssp             EEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEEC
Confidence            99999999999999953  46899999999999999999999        666   999999999999999999999999


Q ss_pred             cCcccccCCCCc---ccccccCCCCccCcccccCC------CCCccccHHHHHHHHHHHHcC----------CCCCCCCC
Q 040363          401 GLSKVMDIGQSY---VSSEVRGTFGYVDPEYRRNH------HVSTSGDVYSFGVVLLQLLSG----------QRVINLGD  461 (548)
Q Consensus       401 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~eLltG----------~~pf~~~~  461 (548)
                      |++.........   ......||+.|+|||++.+.      .++.++||||||+++|||++|          +.||....
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            999876644322   23445799999999998765      344789999999999999999          67776554


Q ss_pred             CCCCcHHHHHHHHHhcCCcccccCCCCCCC-CCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          462 NRPMPLDKMAKFVMRGGNIAKFADPTINGE-YSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      ........+.+.+...     ...+.++.. .+.+..+.+.+++.+|+. +|++|||+.||+++|+++.+...
T Consensus       272 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~  339 (342)
T 1b6c_B          272 PSDPSVEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG  339 (342)
T ss_dssp             CSSCCHHHHHHHHTTS-----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred             cCcccHHHHHHHHHHH-----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence            4444445444433222     122222222 234677788899999987 79999999999999999987543


No 115
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.4e-40  Score=338.19  Aligned_cols=267  Identities=24%  Similarity=0.323  Sum_probs=199.7

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC-----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS-----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++..     ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            36899999999999999999996 5789999999853     23456788999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhh---ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          331 YELCHNGNLSEWLYG---KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      |||+++++|.+++..   ....+++..++.++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999853   3456899999999999999999999877   9999999999999999999999999998765


Q ss_pred             CCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ... .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....   .........+.... .    .+.
T Consensus       188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~-~----~~~  258 (310)
T 2wqm_A          188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEQCD-Y----PPL  258 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------CCHHHHHHHHHTTC-S----CCC
T ss_pred             CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---hhHHHHHHHhhccc-C----CCC
Confidence            322 22234578999999999999999999999999999999999999986432   22333333333221 1    112


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCc
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYR  538 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~  538 (548)
                      ....++.+..+++.+++   ..||++|||+.+|+++|+++....+.+-+.+
T Consensus       259 ~~~~~~~~l~~li~~~l---~~dp~~Rps~~~il~~l~~l~~~~~~~~~~~  306 (310)
T 2wqm_A          259 PSDHYSEELRQLVNMCI---NPDPEKRPDVTYVYDVAKRMHACTASSLEHH  306 (310)
T ss_dssp             CTTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHC------
T ss_pred             cccccCHHHHHHHHHHc---CCChhhCCCHHHHHHHHHHHHHhhhhhhhhh
Confidence            22456666555554444   4489999999999999999987776654433


No 116
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.5e-40  Score=340.89  Aligned_cols=264  Identities=23%  Similarity=0.306  Sum_probs=208.5

Q ss_pred             CCccceeeeeecCceEEEEEEE-----cCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccc--cCCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-----SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCE--DHNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~  328 (548)
                      ++|++.+.||+|+||.||++..     .+++.||+|++...  ...+.+.+|+++++.++||||+++++++.  +.+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            6899999999999999999984     46889999998654  33457899999999999999999999875  456689


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            999999999999999766677999999999999999999999877   99999999999999999999999999987754


Q ss_pred             CCCc--ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCC----------CCCcHHHHHHHHHh
Q 040363          409 GQSY--VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDN----------RPMPLDKMAKFVMR  476 (548)
Q Consensus       409 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~----------~~~~~~~~~~~~~~  476 (548)
                      ....  ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....          ..............
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            3322  23345688899999999999999999999999999999999999853321          11111222222222


Q ss_pred             cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          477 GGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       477 ~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      .      .....+..++++..+++.+|+   ..||++|||+.|++++|+.+......
T Consensus       260 ~------~~~~~~~~~~~~l~~li~~~l---~~dP~~Rps~~ell~~L~~~~~~~~~  307 (327)
T 3lxl_A          260 G------QRLPAPPACPAEVHELMKLCW---APSPQDRPSFSALGPQLDMLWSGSRG  307 (327)
T ss_dssp             T------CCCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHC------
T ss_pred             c------cCCCCCCcccHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHhhhcC
Confidence            1      122334456777666555554   45899999999999999999765544


No 117
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.1e-40  Score=340.50  Aligned_cols=262  Identities=22%  Similarity=0.360  Sum_probs=210.6

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEc------CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCC
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILS------NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN  325 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~  325 (548)
                      ...++|++.+.||+|+||.||+|...      +++.||+|.+...   .....+.+|+.+++.++||||+++++++.+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  101 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ  101 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence            34578999999999999999999854      4788999998643   23456889999999999999999999999999


Q ss_pred             ceEEEEEecCCCChhHHhhhcc---------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEE
Q 040363          326 ESFLVYELCHNGNLSEWLYGKA---------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAK  396 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~k  396 (548)
                      ..++||||+++++|.+++....         ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+|
T Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~k  178 (322)
T 1p4o_A          102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK  178 (322)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEE
T ss_pred             ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEE
Confidence            9999999999999999985432         35688999999999999999999887   99999999999999999999


Q ss_pred             EEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHH
Q 040363          397 LSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFV  474 (548)
Q Consensus       397 L~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~  474 (548)
                      |+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....     .......+
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~  253 (322)
T 1p4o_A          179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLRFV  253 (322)
T ss_dssp             ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHHHHHH
T ss_pred             ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-----HHHHHHHH
Confidence            999999986643322 12233457889999999999999999999999999999999 888885332     33333333


Q ss_pred             HhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          475 MRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       475 ~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      .... .     +..+...+.+..+++.+|+   ..+|++|||+.|++++|+++++....
T Consensus       254 ~~~~-~-----~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~e~l~~L~~~~~~~~~  303 (322)
T 1p4o_A          254 MEGG-L-----LDKPDNCPDMLFELMRMCW---QYNPKMRPSFLEIISSIKEEMEPGFR  303 (322)
T ss_dssp             HTTC-C-----CCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             HcCC-c-----CCCCCCCCHHHHHHHHHHc---CCCcccCcCHHHHHHHHHHhhccCCc
Confidence            3322 1     2233456666555555544   44899999999999999998764443


No 118
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.9e-40  Score=337.15  Aligned_cols=261  Identities=25%  Similarity=0.407  Sum_probs=204.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEcC-----CcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSN-----GQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~-----g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      .++|++.+.||+|+||.||+|....     +..||+|.+...   .....+.+|+.+++.++||||+++++++.+.+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            4688999999999999999998643     246999998643   33457889999999999999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++....
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED  199 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence            999999999999999776678999999999999999999999887   99999999999999999999999999987653


Q ss_pred             CCCc--ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          409 GQSY--VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       409 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      ....  ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....     .......+.....      
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~~~~~~------  268 (333)
T 1mqb_A          200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEVMKAINDGFR------  268 (333)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCC------
T ss_pred             ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHCCCc------
Confidence            3221  1223446889999999999999999999999999999999 999985332     2333333333211      


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcCCC
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKTSN  535 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~~~  535 (548)
                      +..+...+.+..+    ++..|+. +|++|||+.+++++|+++++......
T Consensus       269 ~~~~~~~~~~l~~----li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~  315 (333)
T 1mqb_A          269 LPTPMDCPSAIYQ----LMMQCWQQERARRPKFADIVSILDKLIRAPDSLK  315 (333)
T ss_dssp             CCCCTTCBHHHHH----HHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGG
T ss_pred             CCCcccCCHHHHH----HHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhh
Confidence            1223345665544    5555555 89999999999999999987655433


No 119
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.7e-41  Score=347.09  Aligned_cols=262  Identities=24%  Similarity=0.346  Sum_probs=205.6

Q ss_pred             ccceeeeeecCceEEEEEEE-----cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccC--CceEE
Q 040363          260 LSASNYIGQGVAGKVYKGIL-----SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDH--NESFL  329 (548)
Q Consensus       260 y~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~l  329 (548)
                      |++.+.||+|+||.||++..     .+++.||+|++..+   ...+.+.+|+++++.++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            49999999999999998864     36889999999654   3356789999999999999999999998764  56799


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++..  ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++......
T Consensus       113 v~e~~~~~~L~~~l~~--~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EECCCTTCBHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             EEecccCCcHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            9999999999999943  35899999999999999999999887   999999999999999999999999999887644


Q ss_pred             CC--cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCC-------C---CcHHHHHHHHHhc
Q 040363          410 QS--YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNR-------P---MPLDKMAKFVMRG  477 (548)
Q Consensus       410 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~-------~---~~~~~~~~~~~~~  477 (548)
                      ..  .......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......       .   .....+...+.. 
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  266 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER-  266 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT-
T ss_pred             ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc-
Confidence            32  1233456888999999999999999999999999999999999998633210       0   001111111111 


Q ss_pred             CCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 040363          478 GNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSN  535 (548)
Q Consensus       478 ~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~  535 (548)
                           ......+..++.+..+++.+++   ..+|++|||+.|+++.|+++.+......
T Consensus       267 -----~~~~~~~~~~~~~l~~li~~~l---~~dP~~Rps~~ell~~L~~l~~~~~~~~  316 (318)
T 3lxp_A          267 -----GERLPRPDKCPAEVYHLMKNCW---ETEASFRPTFENLIPILKTVHEKYQGQA  316 (318)
T ss_dssp             -----TCCCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred             -----ccCCCCCccccHHHHHHHHHHc---CCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence                 1122334456766665555444   4489999999999999999987766543


No 120
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=7.4e-40  Score=328.09  Aligned_cols=250  Identities=24%  Similarity=0.335  Sum_probs=204.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||+|..+ +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            478999999999999999999964 6899999998543    23467889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC---EEEEeccCcccccC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ---AKLSDFGLSKVMDI  408 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~---~kL~DFGla~~~~~  408 (548)
                      ||+++++|.+.+.. ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.   +||+|||++.....
T Consensus        85 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           85 DLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             CCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             ecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            99999999998854 467899999999999999999999887   999999999999987655   99999999987653


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      ..  ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+.... ..  .....
T Consensus       161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~-~~--~~~~~  230 (284)
T 3kk8_A          161 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGA-YD--YPSPE  230 (284)
T ss_dssp             SC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC-CC--CCTTT
T ss_pred             Cc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-----hhHHHHHHHhcc-cc--CCchh
Confidence            32  2344679999999999999999999999999999999999999995432     222333222221 11  11222


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ...++++..+++.+|+   ..+|++|||+.|++++
T Consensus       231 ~~~~~~~~~~li~~~l---~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          231 WDTVTPEAKSLIDSML---TVNPKKRITADQALKV  262 (284)
T ss_dssp             TTTSCHHHHHHHHHHS---CSSTTTSCCHHHHTTS
T ss_pred             hcccCHHHHHHHHHHc---ccChhhCCCHHHHhcC
Confidence            3456777777666665   5589999999999985


No 121
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=1.3e-40  Score=341.51  Aligned_cols=256  Identities=19%  Similarity=0.335  Sum_probs=201.9

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcE----EEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQ----VAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~----vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ++|++.+.||+|+||.||+|... +++.    ||+|.+...   ...+.+.+|+.+++.++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            68999999999999999999953 4544    788877433   22346778999999999999999999886 567899


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            99999999999999776678999999999999999999999887   999999999999999999999999999887544


Q ss_pred             CCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          410 QSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       410 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ... ......||..|+|||.+.+..++.++||||||+++|||++ |+.||.....     ......+....      ...
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~------~~~  237 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----AEVPDLLEKGE------RLA  237 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----THHHHHHHTTC------BCC
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCC------CCC
Confidence            322 2344568889999999999999999999999999999999 9999964332     12222222221      112


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhh
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      .+...+.+..+++.+++   ..+|++|||+.|++++|+++....
T Consensus       238 ~~~~~~~~~~~li~~~l---~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          238 QPQICTIDVYMVMVKCW---MIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             CCTTBCTTTTHHHHHHT---CSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             CCCcCcHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHhcc
Confidence            22234555445444443   448999999999999999987543


No 122
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.7e-40  Score=329.94  Aligned_cols=246  Identities=26%  Similarity=0.377  Sum_probs=200.9

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ..++|++.+.||+|+||.||+|... +++.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            3478999999999999999999964 5789999998533     234578899999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++......
T Consensus        87 v~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             EECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            9999999999999854 356899999999999999999999777   999999999999999999999999998654322


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                         ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .....+.+...       ...++
T Consensus       163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~-------~~~~~  227 (279)
T 3fdn_A          163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETYKRISRV-------EFTFP  227 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHT-------CCCCC
T ss_pred             ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-----HHHHHHHHHhC-------CCCCC
Confidence               2234578999999999999999999999999999999999999996332     23333332221       22334


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..++++..+++.+|+   ..+|++|||++|++++
T Consensus       228 ~~~~~~~~~li~~~l---~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          228 DFVTEGARDLISRLL---KHNPSQRPMLREVLEH  258 (279)
T ss_dssp             TTSCHHHHHHHHHHC---CSSGGGSCCHHHHHHC
T ss_pred             CcCCHHHHHHHHHHh---ccChhhCCCHHHHhhC
Confidence            456777666666655   5589999999999986


No 123
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2e-40  Score=334.17  Aligned_cols=265  Identities=23%  Similarity=0.353  Sum_probs=210.2

Q ss_pred             hcCCcccee-eeeecCceEEEEEEE---cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          256 ATNNLSASN-YIGQGVAGKVYKGIL---SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       256 ~~~~y~~~~-~LG~G~fg~Vy~a~~---~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      ..++|.+.+ .||+|+||.||+|..   .+++.||+|++...    ...+++.+|+.+++.++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            346788888 999999999999964   34789999998543    2356789999999999999999999998 56678


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus        93 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             EEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            999999999999999954 456899999999999999999999887   9999999999999999999999999998765


Q ss_pred             CCCCcc--cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          408 IGQSYV--SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       408 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ......  .....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     .......+....      
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~------  237 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGE------  237 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC------
T ss_pred             cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC------
Confidence            443322  222346789999999998899999999999999999999 999986432     233333333321      


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCcc
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRS  539 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s  539 (548)
                      .+..+..++++..+++.+++   ..||++|||+.++++.|++++......++...
T Consensus       238 ~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~  289 (291)
T 1xbb_A          238 RMGCPAGCPREMYDLMNLCW---TYDVENRPGFAAVELRLRNYYYDVVNEGHHHH  289 (291)
T ss_dssp             CCCCCTTCCHHHHHHHHHHT---CSSTTTSCCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             CCCCCCCCCHHHHHHHHHHc---CCChhhCcCHHHHHHHHHHHHHHHhhcccccc
Confidence            22334456766555555544   45899999999999999999987766554443


No 124
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=2.9e-40  Score=346.30  Aligned_cols=247  Identities=25%  Similarity=0.296  Sum_probs=197.6

Q ss_pred             cceeeeeecCceEEEEEEE-cCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecCCC
Q 040363          261 SASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCHNG  337 (548)
Q Consensus       261 ~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g  337 (548)
                      ...+.||+|+||.||+|.. .+|+.||+|++...  ...+.+.+|+.+++.++||||+++++++.+.+..++||||++++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            3467899999999999996 56899999998654  34568899999999999999999999999999999999999999


Q ss_pred             ChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE--cCCCCEEEEeccCcccccCCCCcccc
Q 040363          338 NLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI--NADFQAKLSDFGLSKVMDIGQSYVSS  415 (548)
Q Consensus       338 sL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~~  415 (548)
                      +|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||+  +.++.+||+|||+++.......  ..
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~  246 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK  246 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence            999999766677999999999999999999999887   9999999999999  5678899999999987654322  23


Q ss_pred             cccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHH
Q 040363          416 EVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVE  495 (548)
Q Consensus       416 ~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~  495 (548)
                      ...||+.|+|||++.+..++.++||||||+++|||++|+.||....     .......+.... .  ...+.....++++
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~-~--~~~~~~~~~~~~~  318 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-----DAETLNNILACR-W--DLEDEEFQDISEE  318 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTC-C--CSCSGGGTTSCHH
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcc-C--CCChhhhccCCHH
Confidence            4569999999999999999999999999999999999999996433     122222222221 0  1112223456777


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          496 AFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       496 ~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +.+++.+|+   ..||++|||+.|++++
T Consensus       319 ~~~li~~~L---~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          319 AKEFISKLL---IKEKSWRISASEALKH  343 (373)
T ss_dssp             HHHHHHTTS---CSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHc---CCChhhCCCHHHHhcC
Confidence            777666665   5589999999999983


No 125
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.4e-40  Score=332.86  Aligned_cols=252  Identities=27%  Similarity=0.376  Sum_probs=199.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccccc-CCceEEEEEecC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCED-HNESFLVYELCH  335 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lV~E~~~  335 (548)
                      .++|++.+.||+|+||.||++.. +|+.||+|.+..+...+.+.+|+.+++.++||||+++++++.+ .+..++||||++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   98 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   98 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence            46899999999999999999987 5889999999877777889999999999999999999998654 457899999999


Q ss_pred             CCChhHHhhhccC-cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCccc
Q 040363          336 NGNLSEWLYGKAG-VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVS  414 (548)
Q Consensus       336 ~gsL~~~l~~~~~-~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  414 (548)
                      +++|.+++..... .+++..++.++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++.......    
T Consensus        99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----  171 (278)
T 1byg_A           99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----  171 (278)
T ss_dssp             TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc----
Confidence            9999999965432 3788999999999999999999877   9999999999999999999999999987654321    


Q ss_pred             ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCC
Q 040363          415 SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYS  493 (548)
Q Consensus       415 ~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s  493 (548)
                      ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....     ......+...      ..+..+..++
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~------~~~~~~~~~~  240 (278)
T 1byg_A          172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKG------YKMDAPDGCP  240 (278)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTT------CCCCCCTTCC
T ss_pred             cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcC------CCCCCcccCC
Confidence            23357889999999999999999999999999999998 9999864331     2222222211      1233445567


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhh
Q 040363          494 VEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       494 ~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~  530 (548)
                      ++..+++.+++   ..+|++|||+.|+++.|+++...
T Consensus       241 ~~l~~li~~~l---~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          241 PAVYEVMKNCW---HLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh---cCChhhCCCHHHHHHHHHHHHhh
Confidence            76665555544   44899999999999999998754


No 126
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=5.3e-40  Score=333.78  Aligned_cols=255  Identities=27%  Similarity=0.348  Sum_probs=196.9

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-------chHHHHHHHHHhcccCC---CCceeeeecccccC
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-------GYVDTFVREVRSLSHVQ---HPNLVALLSYCEDH  324 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-------~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~  324 (548)
                      ..++|++.+.||+|+||.||+|.. .+++.||+|++...       .....+.+|+.+++.++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357999999999999999999995 57899999998522       12346778888877774   99999999998765


Q ss_pred             C-----ceEEEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEE
Q 040363          325 N-----ESFLVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLS  398 (548)
Q Consensus       325 ~-----~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~  398 (548)
                      .     ..++||||+. ++|.+++.... ..+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence            4     4789999997 59999986543 24899999999999999999999887   9999999999999999999999


Q ss_pred             eccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC
Q 040363          399 DFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG  478 (548)
Q Consensus       399 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~  478 (548)
                      |||+++.....  .......||+.|+|||++.+..++.++||||||+++|||++|+.||....    ......+.....+
T Consensus       163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~~  236 (308)
T 3g33_A          163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS----EADQLGKIFDLIG  236 (308)
T ss_dssp             SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS----HHHHHHHHHHHHC
T ss_pred             eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhC
Confidence            99999876532  22345679999999999999999999999999999999999999996433    1222222222111


Q ss_pred             CcccccCC-------------------CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 NIAKFADP-------------------TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ~~~~~~d~-------------------~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .......+                   .....++++..+++.+|+   ..||++|||+.|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEML---TFNPHKRISAFRALQH  297 (308)
T ss_dssp             CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHh---cCCCccCCCHHHHhcC
Confidence            11000000                   112346677777776666   5699999999999864


No 127
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=6.3e-40  Score=354.25  Aligned_cols=246  Identities=25%  Similarity=0.391  Sum_probs=206.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|.+.+.||+|+||.||+|.+. +|+.||||++...     ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            368999999999999999999965 7999999998543     2346789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++. ..+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++.......
T Consensus        95 ~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           95 MEYVSGGELFDYIC-KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             EECCSSEEHHHHTT-SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred             EeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence            99999999999995 4467999999999999999999999777   9999999999999999999999999998765332


Q ss_pred             CcccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                        ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....     .......+..+.       ...+
T Consensus       171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~-------~~~p  236 (476)
T 2y94_A          171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKICDGI-------FYTP  236 (476)
T ss_dssp             --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHHHTTC-------CCCC
T ss_pred             --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCC-------cCCC
Confidence              2345679999999999988765 789999999999999999999996432     222333333221       1233


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..+++++.+++.+|+   ..||++|||++|++++
T Consensus       237 ~~~s~~~~~Li~~~L---~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          237 QYLNPSVISLLKHML---QVDPMKRATIKDIREH  267 (476)
T ss_dssp             TTCCHHHHHHHHHHT---CSSTTTSCCHHHHHTC
T ss_pred             ccCCHHHHHHHHHHc---CCCchhCcCHHHHHhC
Confidence            456788777777776   6699999999999984


No 128
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=4.1e-41  Score=345.88  Aligned_cols=249  Identities=26%  Similarity=0.317  Sum_probs=182.3

Q ss_pred             eeeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEEEecCCCChh
Q 040363          263 SNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVYELCHNGNLS  340 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~gsL~  340 (548)
                      .+.||+|+||.||++..+ +++.||+|++... ....+.+|+.+++.++ ||||+++++++.++...++||||+++++|.
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   94 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF   94 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence            378999999999999964 6899999998544 4457889999999996 999999999999999999999999999999


Q ss_pred             HHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC---CEEEEeccCcccccCCCCcccccc
Q 040363          341 EWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF---QAKLSDFGLSKVMDIGQSYVSSEV  417 (548)
Q Consensus       341 ~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~~~  417 (548)
                      +++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++   .+||+|||+++...... ......
T Consensus        95 ~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~  169 (325)
T 3kn6_A           95 ERIKK-KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTP  169 (325)
T ss_dssp             HHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred             HHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccccc
Confidence            99954 467999999999999999999999877   99999999999998765   79999999998765332 223445


Q ss_pred             cCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCC--CCcHHHHHHHHHhcCCcccccCCCCCCCCCHH
Q 040363          418 RGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNR--PMPLDKMAKFVMRGGNIAKFADPTINGEYSVE  495 (548)
Q Consensus       418 ~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~  495 (548)
                      .||+.|+|||++.+..++.++||||||+++|+|++|+.||......  ..........+..+. .  ......+..++++
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~s~~  246 (325)
T 3kn6_A          170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD-F--SFEGEAWKNVSQE  246 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC-C--CCCSHHHHTSCHH
T ss_pred             CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC-C--CCCcccccCCCHH
Confidence            7899999999999999999999999999999999999999754432  122333333332221 1  1112222346788


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          496 AFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       496 ~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +.+++.+|+   ..||++|||+.|++++
T Consensus       247 ~~~li~~~L---~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          247 AKDLIQGLL---TVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHHHHHHH---CCCTTTCCCTTTSTTC
T ss_pred             HHHHHHHHC---CCChhHCCCHHHHhcC
Confidence            888777777   6699999999999754


No 129
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.8e-40  Score=338.89  Aligned_cols=257  Identities=28%  Similarity=0.418  Sum_probs=205.8

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEE--EEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccCCceEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQV--AVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~v--AvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      ++|++.+.||+|+||.||+|.. .++..+  |+|.+...   ...+.+.+|+++++.+ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            6899999999999999999995 456644  99988542   3345789999999999 899999999999999999999


Q ss_pred             EEecCCCChhHHhhhcc---------------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCE
Q 040363          331 YELCHNGNLSEWLYGKA---------------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQA  395 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~  395 (548)
                      |||+++++|.+++....               ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999996442               36899999999999999999999887   9999999999999999999


Q ss_pred             EEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHH
Q 040363          396 KLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFV  474 (548)
Q Consensus       396 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~  474 (548)
                      ||+|||+++....  ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....     .......+
T Consensus       182 kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~  254 (327)
T 1fvr_A          182 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEKL  254 (327)
T ss_dssp             EECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHG
T ss_pred             EEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-----HHHHHHHh
Confidence            9999999874331  112233457889999999998899999999999999999998 999985432     22333222


Q ss_pred             HhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          475 MRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       475 ~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ...      ..+..+..++++..+++.+|+   ..+|++|||+.|++++|+++++..+.
T Consensus       255 ~~~------~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~~L~~~~~~~~~  304 (327)
T 1fvr_A          255 PQG------YRLEKPLNCDDEVYDLMRQCW---REKPYERPSFAQILVSLNRMLEERKT  304 (327)
T ss_dssp             GGT------CCCCCCTTBCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred             hcC------CCCCCCCCCCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHHhhcC
Confidence            221      122334456777666665554   45899999999999999999976654


No 130
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=2.6e-40  Score=338.48  Aligned_cols=249  Identities=25%  Similarity=0.295  Sum_probs=203.4

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc--------hHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG--------YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~--------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      ++|++.+.||+|+||.||++..+ +|+.||+|.+....        ..+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            57999999999999999999964 68999999985321        3567999999999999999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC----CEEEEeccCcc
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF----QAKLSDFGLSK  404 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~----~~kL~DFGla~  404 (548)
                      +||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++    .+||+|||++.
T Consensus        92 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             EEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             EEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            99999999999999953 467899999999999999999999887   99999999999999888    79999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ......  ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+....   ...
T Consensus       168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~---~~~  237 (321)
T 2a2a_A          168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITSVS---YDF  237 (321)
T ss_dssp             ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTC---CCC
T ss_pred             ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcc---ccc
Confidence            765332  2344579999999999999999999999999999999999999995432     222222222211   111


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ++.....++.+..+++.+|+   ..||++|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          238 DEEFFSHTSELAKDFIRKLL---VKETRKRLTIQEALRH  273 (321)
T ss_dssp             CHHHHTTCCHHHHHHHHTTS---CSSTTTSCCHHHHHHS
T ss_pred             ChhhhcccCHHHHHHHHHHc---CCChhhCcCHHHHhcC
Confidence            22222455666666555554   4589999999999874


No 131
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=2e-40  Score=337.39  Aligned_cols=265  Identities=24%  Similarity=0.404  Sum_probs=199.0

Q ss_pred             HHHHHhhcCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeeccc
Q 040363          250 IKEVYSATNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYC  321 (548)
Q Consensus       250 ~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~  321 (548)
                      ..++....++|.+.+.||+|+||.||+|...    +++.||+|.+...    ...+.+.+|+.+++.++||||+++++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            3344455678999999999999999999853    3458999998533    3346789999999999999999999998


Q ss_pred             ccCC-----ceEEEEEecCCCChhHHhhh-----ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC
Q 040363          322 EDHN-----ESFLVYELCHNGNLSEWLYG-----KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA  391 (548)
Q Consensus       322 ~~~~-----~~~lV~E~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~  391 (548)
                      .+.+     ..++||||+++++|.+++..     ....+++..++.++.|++.||.|||+.+   |+||||||+||+++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~  182 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRD  182 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECT
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcC
Confidence            7654     34999999999999999842     3356899999999999999999999777   999999999999999


Q ss_pred             CCCEEEEeccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHH
Q 040363          392 DFQAKLSDFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDK  469 (548)
Q Consensus       392 ~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~  469 (548)
                      ++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.....     ..
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~  257 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----HE  257 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GG
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----HH
Confidence            99999999999987654322 22233457889999999999999999999999999999999 8888864432     12


Q ss_pred             HHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhc
Q 040363          470 MAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       470 ~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      .........      .+..+..++++..+    ++..|+. +|++|||+.+++++|+++++...
T Consensus       258 ~~~~~~~~~------~~~~~~~~~~~l~~----li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          258 MYDYLLHGH------RLKQPEDCLDELYE----IMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             HHHHHHTTC------CCCCBTTCCHHHHH----HHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHcCC------CCCCCccccHHHHH----HHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            222222221      12233456666555    4455554 89999999999999999987543


No 132
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.1e-40  Score=339.47  Aligned_cols=257  Identities=19%  Similarity=0.363  Sum_probs=199.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcE----EEEEEecC---cchHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQ----VAVKHIIS---DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~----vAvK~i~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      .++|++.++||+|+||.||+|.. .+++.    ||+|.+..   ....+.+.+|+.+++.++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            36899999999999999999995 34554    57777643   245678999999999999999999999988654 78


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +|+|++.+|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence            999999999999999777778999999999999999999999887   99999999999999999999999999987653


Q ss_pred             CCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          409 GQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       409 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....     ..+...+....      ..
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~------~~  238 (327)
T 3lzb_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEKGE------RL  238 (327)
T ss_dssp             ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTC------CC
T ss_pred             ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCC------CC
Confidence            322 22233457889999999999999999999999999999999 9999964432     22222333221      12


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhh
Q 040363          487 TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      ..+...+.+..+++.+++   ..+|++|||+.|+++.|+++.+..
T Consensus       239 ~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          239 PQPPICTIDVYMIMRKCW---MIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             CCCccCCHHHHHHHHHHc---CCChhHCcCHHHHHHHHHHHHhCc
Confidence            223445666555554444   448999999999999999997543


No 133
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.7e-40  Score=345.63  Aligned_cols=243  Identities=23%  Similarity=0.277  Sum_probs=194.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHh-cccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRS-LSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||+++.+ +++.||+|++...     ...+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            368999999999999999999964 5889999998543     233456777776 577899999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       117 v~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~  192 (373)
T 2r5t_A          117 VLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  192 (373)
T ss_dssp             EEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred             EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence            9999999999999954 457889999999999999999999887   999999999999999999999999999864322


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                       ........||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+...       ...++
T Consensus       193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~-------~~~~~  259 (373)
T 2r5t_A          193 -NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNK-------PLQLK  259 (373)
T ss_dssp             -CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----HHHHHHHHHHS-------CCCCC
T ss_pred             -CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhc-------ccCCC
Confidence             223455789999999999999999999999999999999999999995432     33333333322       12344


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQ  519 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~e  519 (548)
                      ..++.++.+++.+|+   ..||++||++.+
T Consensus       260 ~~~~~~~~~li~~lL---~~dp~~R~~~~~  286 (373)
T 2r5t_A          260 PNITNSARHLLEGLL---QKDRTKRLGAKD  286 (373)
T ss_dssp             SSSCHHHHHHHHHHT---CSSGGGSTTTTT
T ss_pred             CCCCHHHHHHHHHHc---ccCHHhCCCCCC
Confidence            567888888887776   669999999853


No 134
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=340.10  Aligned_cols=243  Identities=25%  Similarity=0.325  Sum_probs=192.5

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.++||+|+||+||+|... +++.||||++...    ....+..+|+..+..+ +||||+++++++.+.+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999999999975 7999999988542    2233455566555555 8999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+ +++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++......  
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--  210 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--  210 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence            999 67999998777778999999999999999999999877   999999999999999999999999999876532  


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                      .......||+.|+|||++.+ .++.++||||||+++|||++|..|+...       ..+. .+. .+    ...+.+...
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~-~~~-~~----~~~~~~~~~  276 (311)
T 3p1a_A          211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-------EGWQ-QLR-QG----YLPPEFTAG  276 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-------HHHH-HHT-TT----CCCHHHHTT
T ss_pred             CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-------cHHH-HHh-cc----CCCcccccC
Confidence            22344569999999998876 7999999999999999999997765321       1111 111 11    112233345


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ++++..+++.+|+   ..||++|||+.|++++
T Consensus       277 ~~~~l~~li~~~L---~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          277 LSSELRSVLVMML---EPDPKLRATAEALLAL  305 (311)
T ss_dssp             SCHHHHHHHHHHS---CSSTTTSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHc---CCChhhCcCHHHHHhC
Confidence            6777666666655   5589999999999864


No 135
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=8.9e-40  Score=332.93  Aligned_cols=260  Identities=22%  Similarity=0.278  Sum_probs=199.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||++... +++.||+|++...     ...+.+.+|+.+++.++||||+++++++..++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            478999999999999999999964 6899999998543     2246788999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus       113 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          113 MRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence            999999999999954 457899999999999999999999887   9999999999999999999999999998765443


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      ........||+.|+|||.+.+..++.++||||||+++|||++|+.||....     ...+...+......    ......
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~----~~~~~~  259 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-----LSVMGAHINQAIPR----PSTVRP  259 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-----HHHHHHHHHSCCCC----GGGTST
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-----HHHHHHHhccCCCC----ccccCC
Confidence            333445679999999999999999999999999999999999999996432     22222222221111    112334


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCC-CHHHHHHHHHHhhhhhc
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRP-SMEQVVLRLEKALDISK  532 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RP-T~~evl~~L~~~l~~~~  532 (548)
                      .++++..+++.+++   ..+|++|| |++++++.|+++++...
T Consensus       260 ~~~~~l~~li~~~l---~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          260 GIPVAFDAVIARGM---AKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             TCCTHHHHHHHHHT---CSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             CCCHHHHHHHHHhc---cCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            56777666655555   45899999 99999999999876554


No 136
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.9e-40  Score=330.01  Aligned_cols=244  Identities=24%  Similarity=0.350  Sum_probs=181.8

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.+.||+|+||.||+|.. .+++.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            6899999999999999999995 57899999998543     33557889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+ +++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++....... 
T Consensus        93 e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  166 (275)
T 2eue_A           93 EYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-  166 (275)
T ss_dssp             ECC-CEEHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred             hhc-CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence            999 6788888743 457999999999999999999999887   9999999999999999999999999998765332 


Q ss_pred             cccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                       ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....     .......+...       ...++.
T Consensus       167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~-------~~~~~~  233 (275)
T 2eue_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNG-------VYTLPK  233 (275)
T ss_dssp             ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHT-------CCCCCT
T ss_pred             -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhC-------CCCCCc
Confidence             2234569999999999988765 789999999999999999999995332     33333333322       123345


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++++..+++.+|+   ..||++|||+.|++++
T Consensus       234 ~~~~~~~~li~~~l---~~dP~~Rps~~e~l~h  263 (275)
T 2eue_A          234 FLSPGAAGLIKRML---IVNPLNRISIHEIMQD  263 (275)
T ss_dssp             TSCHHHHHHHHHHS---CSSGGGSCCHHHHTTC
T ss_pred             cCCHHHHHHHHHHh---hcCHhHCCCHHHHhhC
Confidence            56777777666665   5689999999999864


No 137
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-40  Score=346.07  Aligned_cols=253  Identities=24%  Similarity=0.330  Sum_probs=206.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE----cCCcEEEEEEecCc------chHHHHHHHHHhcccC-CCCceeeeecccccCC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL----SNGQQVAVKHIISD------GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHN  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~----~~g~~vAvK~i~~~------~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~  325 (548)
                      .++|++.+.||+|+||.||++..    .+++.||||++...      ...+.+.+|+.+++.+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            36899999999999999999996    47899999998532      2345677899999999 6999999999999999


Q ss_pred             ceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  208 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eEEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence            99999999999999999954 457899999999999999999999877   99999999999999999999999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccC--CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRN--HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      .............||+.|+|||++.+  ..++.++||||||+++|||++|+.||........ ...+.+.....      
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~------  281 (355)
T 1vzo_A          209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKS------  281 (355)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHC------
T ss_pred             cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhcc------
Confidence            65444444455679999999999875  4578999999999999999999999975543332 33333333221      


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-----CHHHHHHHH
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRP-----SMEQVVLRL  524 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RP-----T~~evl~~L  524 (548)
                       .+.++..++....+++.+|+   ..||++||     |++|++++.
T Consensus       282 -~~~~~~~~~~~~~~li~~~L---~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          282 -EPPYPQEMSALAKDLIQRLL---MKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHT---CSSGGGSTTSSTTTHHHHHTSG
T ss_pred             -CCCCCcccCHHHHHHHHHHh---hhCHHHhcCCCCCCHHHHHcCc
Confidence             23444566777666666665   55899999     999998864


No 138
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.6e-40  Score=362.20  Aligned_cols=252  Identities=24%  Similarity=0.312  Sum_probs=211.9

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ..++|++.+.||+|+||.||++..+ +|+.||+|++...     ...+.+.+|+.+|+.++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3467999999999999999999964 7999999998532     334578899999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          330 VYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      ||||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            999999999999986543 35899999999999999999999887   99999999999999999999999999987653


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      ..  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.+.+...       ...+
T Consensus       339 ~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~~~-------~~~~  408 (576)
T 2acx_A          339 GQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKEV-------PEEY  408 (576)
T ss_dssp             TC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHHHC-------CCCC
T ss_pred             Cc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhhcc-------cccC
Confidence            32  2334589999999999999999999999999999999999999997554322 233333333321       2334


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCC-----CHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRP-----SMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RP-----T~~evl~~  523 (548)
                      +..+++++.+++.+|+   ..||++||     +++|+++|
T Consensus       409 p~~~s~~~~dLI~~lL---~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          409 SERFSPQARSLCSQLL---CKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CTTSCHHHHHHHHHHT---CSSGGGSTTCSSSHHHHHHTS
T ss_pred             CccCCHHHHHHHHHhc---cCCHHHcCCCCCCCHHHHHhC
Confidence            4668889888888887   67999999     78999875


No 139
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.4e-40  Score=337.58  Aligned_cols=254  Identities=28%  Similarity=0.272  Sum_probs=198.4

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC-------cchHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS-------DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~-------~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      ..++|++.+.||+|+||.||+|.. .+++.||+|++..       ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  103 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI  103 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeE
Confidence            347899999999999999999996 5688999998843       24456899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhc---------------------------------------cCcchHHHHHHHHHHHHHHHHH
Q 040363          328 FLVYELCHNGNLSEWLYGK---------------------------------------AGVLSWIQRLKIAIDSATGLWF  368 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~qia~aL~y  368 (548)
                      ++||||+++|+|.+++...                                       ...+++..++.++.|++.||.|
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  183 (345)
T 3hko_A          104 CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY  183 (345)
T ss_dssp             EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence            9999999999999988410                                       1234678888999999999999


Q ss_pred             hhhCCCCceEecccCCCCeeEcCCC--CEEEEeccCcccccCCC---CcccccccCCCCccCcccccC--CCCCccccHH
Q 040363          369 LHTYPEGCIIHRDIKPTNILINADF--QAKLSDFGLSKVMDIGQ---SYVSSEVRGTFGYVDPEYRRN--HHVSTSGDVY  441 (548)
Q Consensus       369 LH~~~~~~IvH~DlKp~NILl~~~~--~~kL~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDIw  441 (548)
                      ||+.+   |+||||||+|||++.++  .+||+|||+++.+....   ........||+.|+|||.+.+  ..++.++|||
T Consensus       184 LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  260 (345)
T 3hko_A          184 LHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW  260 (345)
T ss_dssp             HHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred             HHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence            99887   99999999999998776  89999999998764322   122345679999999999865  6789999999


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHH
Q 040363          442 SFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVV  521 (548)
Q Consensus       442 SlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl  521 (548)
                      |||+++|||++|+.||....     .......+......   ........+++++.+++.+|+   ..+|++|||+.|++
T Consensus       261 slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l---~~~p~~Rps~~~~l  329 (345)
T 3hko_A          261 SAGVLLHLLLMGAVPFPGVN-----DADTISQVLNKKLC---FENPNYNVLSPLARDLLSNLL---NRNVDERFDAMRAL  329 (345)
T ss_dssp             HHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC---TTSGGGGGSCHHHHHHHHHHS---CSCTTTSCCHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhcccc---cCCcccccCCHHHHHHHHHHc---CCChhHCCCHHHHh
Confidence            99999999999999995433     22222222222111   111122346777777666665   55899999999998


Q ss_pred             HH
Q 040363          522 LR  523 (548)
Q Consensus       522 ~~  523 (548)
                      ++
T Consensus       330 ~h  331 (345)
T 3hko_A          330 QH  331 (345)
T ss_dssp             HS
T ss_pred             cC
Confidence            74


No 140
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.3e-40  Score=348.21  Aligned_cols=255  Identities=24%  Similarity=0.352  Sum_probs=190.6

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC----cchHHHHHHHHHhcccCC-CCceeeeecccccC--Cce
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS----DGYVDTFVREVRSLSHVQ-HPNLVALLSYCEDH--NES  327 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~----~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~~  327 (548)
                      ..++|++.+.||+|+||.||+|.. .+|+.||||++..    ....+++.+|+.+++.+. ||||+++++++...  ...
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            357999999999999999999995 5789999999843    234567889999999997 99999999998644  468


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||++ ++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            99999997 589998843  57899999999999999999999887   9999999999999999999999999998754


Q ss_pred             CCC--------------------CcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCc
Q 040363          408 IGQ--------------------SYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMP  466 (548)
Q Consensus       408 ~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~  466 (548)
                      ...                    ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----  236 (388)
T 3oz6_A          161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST----  236 (388)
T ss_dssp             SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----
T ss_pred             ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH----
Confidence            211                    112344679999999999876 6799999999999999999999999964431    


Q ss_pred             HHHHHHHHHhcCCc---------------------------ccccC------------CCCCCCCCHHHHHHHHHHHHHh
Q 040363          467 LDKMAKFVMRGGNI---------------------------AKFAD------------PTINGEYSVEAFDLVFKLALSC  507 (548)
Q Consensus       467 ~~~~~~~~~~~~~~---------------------------~~~~d------------~~l~~~~s~~~~~ll~~ll~~C  507 (548)
                      ...+...+...+..                           .....            .......++++.+++.+|+   
T Consensus       237 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L---  313 (388)
T 3oz6_A          237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL---  313 (388)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC---
T ss_pred             HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh---
Confidence            11111111100000                           00000            0112256778777777776   


Q ss_pred             hCCCCCCCCHHHHHHH
Q 040363          508 TGIKQQRPSMEQVVLR  523 (548)
Q Consensus       508 ~~dP~~RPT~~evl~~  523 (548)
                      ..||++|||++|+++|
T Consensus       314 ~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          314 QFNPNKRISANDALKH  329 (388)
T ss_dssp             CSSGGGSCCHHHHTTS
T ss_pred             ccCcccCCCHHHHhCC
Confidence            6699999999999987


No 141
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-39  Score=341.98  Aligned_cols=258  Identities=23%  Similarity=0.388  Sum_probs=194.9

Q ss_pred             CccceeeeeecCceEEEEEEEc--CC--cEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccc-cCCceEEE
Q 040363          259 NLSASNYIGQGVAGKVYKGILS--NG--QQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCE-DHNESFLV  330 (548)
Q Consensus       259 ~y~~~~~LG~G~fg~Vy~a~~~--~g--~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lV  330 (548)
                      .|.+.+.||+|+||.||+|...  ++  ..||+|.+...   ...+++.+|+.+++.++||||+++++++. .++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4778899999999999999953  22  46899988532   34568999999999999999999999864 45678999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccccc
Confidence            9999999999999776677899999999999999999999887   9999999999999999999999999998664332


Q ss_pred             Cc---ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          411 SY---VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       411 ~~---~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ..   ......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||.......  ..   ..+..+.      .+
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~---~~~~~~~------~~  315 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--IT---VYLLQGR------RL  315 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HH---HHHHTTC------CC
T ss_pred             cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HH---HHHHcCC------CC
Confidence            11   1233457889999999999999999999999999999999 666665433221  11   1222221      11


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcCC
Q 040363          487 TINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKTS  534 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~~  534 (548)
                      ..+...+.+..+    ++..|+. +|++|||+.|++++|++++......
T Consensus       316 ~~p~~~~~~l~~----li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~  360 (373)
T 3c1x_A          316 LQPEYCPDPLYE----VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  360 (373)
T ss_dssp             CCCTTCCHHHHH----HHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             CCCCCCCHHHHH----HHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence            223345655444    5555555 8999999999999999998765543


No 142
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=3.3e-40  Score=341.93  Aligned_cols=252  Identities=23%  Similarity=0.295  Sum_probs=204.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.+.||+|+||.||++..+ +++.||+|.+.....  ...+|++++.++ +||||+++++++.+++..++||||+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~   98 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM   98 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence            467999999999999999999964 689999999854432  345688888888 7999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC----CCEEEEeccCcccccCCC
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD----FQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~----~~~kL~DFGla~~~~~~~  410 (548)
                      ++|+|.+++.. .+.+++..+..++.|++.||.|||+.+   |+||||||+|||+..+    +.+||+|||+++......
T Consensus        99 ~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           99 KGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             CSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             CCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            99999999854 457999999999999999999999887   9999999999998543    349999999998765432


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      . ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....  .....+...+..+. .  ......+.
T Consensus       175 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~-~--~~~~~~~~  248 (342)
T 2qr7_A          175 G-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSGK-F--SLSGGYWN  248 (342)
T ss_dssp             C-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHCC-C--CCCSTTTT
T ss_pred             C-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccCC-c--ccCccccc
Confidence            2 23456789999999999988899999999999999999999999964322  23344444443322 1  12223445


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+++++.+++.+|+   ..||++|||+.|++++
T Consensus       249 ~~s~~~~~li~~~L---~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          249 SVSDTAKDLVSKML---HVDPHQRLTAALVLRH  278 (342)
T ss_dssp             TSCHHHHHHHHHHT---CSSTTTSCCHHHHTTS
T ss_pred             cCCHHHHHHHHHHC---CCChhHCcCHHHHhcC
Confidence            67888888888777   6799999999999875


No 143
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=3e-40  Score=336.56  Aligned_cols=258  Identities=25%  Similarity=0.362  Sum_probs=195.0

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCce---
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES---  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~---  327 (548)
                      .++|++.+.||+|+||.||++.. .+++.||+|++..+     ...+.+.+|+.+++.++||||+++++++......   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            36899999999999999999995 57899999998543     2345789999999999999999999998765543   


Q ss_pred             -EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          328 -FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       328 -~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                       ++||||+++++|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        91 ~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             cEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence             999999999999999954 457899999999999999999999887   999999999999999999999999999876


Q ss_pred             cCCCC--cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          407 DIGQS--YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       407 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      .....  .......||+.|+|||++.+..++.++||||||+++|||++|+.||....     ...............   
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~---  238 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-----PVSVAYQHVREDPIP---  238 (311)
T ss_dssp             ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCCCC---
T ss_pred             cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCCC---
Confidence            54322  22334579999999999999999999999999999999999999995432     222222222221111   


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHH-HHHHHhhh
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVV-LRLEKALD  529 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl-~~L~~~l~  529 (548)
                      .......++.+..+++.+++   ..||++||++.+++ ..+.+...
T Consensus       239 ~~~~~~~~~~~l~~li~~~l---~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          239 PSARHEGLSADLDAVVLKAL---AKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             HHHHSTTCCHHHHHHHHHHT---CSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             cccccCCCCHHHHHHHHHHH---hcCHhhChhhHHHHHHHHHHHhc
Confidence            11122346777666665555   55899999665544 55555543


No 144
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=4.4e-40  Score=337.85  Aligned_cols=259  Identities=27%  Similarity=0.405  Sum_probs=207.3

Q ss_pred             hcCCccceeeeeecCceEEEEEEEcC-C-----cEEEEEEecCc---chHHHHHHHHHhcccC-CCCceeeeecccccCC
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILSN-G-----QQVAVKHIISD---GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHN  325 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~~-g-----~~vAvK~i~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~  325 (548)
                      ..++|++.+.||+|+||.||+|.... +     ..||+|.+...   ...+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            35789999999999999999999642 2     47999998654   3456789999999999 8999999999999999


Q ss_pred             ceEEEEEecCCCChhHHhhhc-------------cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC
Q 040363          326 ESFLVYELCHNGNLSEWLYGK-------------AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD  392 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~  392 (548)
                      ..++||||+++|+|.+++...             ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.+
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence            999999999999999998543             235789999999999999999999887   9999999999999999


Q ss_pred             CCEEEEeccCcccccCCCCc-ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHH
Q 040363          393 FQAKLSDFGLSKVMDIGQSY-VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKM  470 (548)
Q Consensus       393 ~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~  470 (548)
                      +.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||......    ...
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~  276 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN----SKF  276 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS----HHH
T ss_pred             CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh----HHH
Confidence            99999999999876543322 2334567889999999999999999999999999999999 89998643321    122


Q ss_pred             HHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          471 AKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       471 ~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      .......      ..+..+...+++..++    +..|+. +|.+|||+.|++++|+++....
T Consensus       277 ~~~~~~~------~~~~~~~~~~~~l~~l----i~~~l~~~p~~Rps~~~l~~~L~~~~~~~  328 (333)
T 2i1m_A          277 YKLVKDG------YQMAQPAFAPKNIYSI----MQACWALEPTHRPTFQQICSFLQEQAQED  328 (333)
T ss_dssp             HHHHHHT------CCCCCCTTCCHHHHHH----HHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcC------CCCCCCCCCCHHHHHH----HHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence            2222221      1122233456665554    445555 8999999999999999987643


No 145
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=8.4e-40  Score=357.95  Aligned_cols=251  Identities=21%  Similarity=0.300  Sum_probs=209.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|.+.+.||+|+||.||+++.+ +|+.||+|++...     ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            368999999999999999999974 6999999998543     3346788999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhc---cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          331 YELCHNGNLSEWLYGK---AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      |||++||+|.+++...   ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            9999999999998653   346899999999999999999999887   9999999999999999999999999998765


Q ss_pred             CCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      .... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.+.+...       ...
T Consensus       341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~~-------~~~  411 (543)
T 3c4z_A          341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLEQ-------AVT  411 (543)
T ss_dssp             TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHHC-------CCC
T ss_pred             CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhhc-------ccC
Confidence            4332 2344689999999999999999999999999999999999999997554322 233344333322       123


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCH-----HHHHH
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSM-----EQVVL  522 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~-----~evl~  522 (548)
                      ++..+++++.+++.+|+   ..||++||++     +++++
T Consensus       412 ~p~~~s~~~~~li~~lL---~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          412 YPDKFSPASKDFCEALL---QKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             CCTTSCHHHHHHHHHHS---CSSGGGSCCCBTTBSHHHHT
T ss_pred             CCcccCHHHHHHHHHhc---cCCHhHCCCCcccCHHHHHc
Confidence            44567888888887776   6699999975     66765


No 146
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=6.3e-40  Score=350.23  Aligned_cols=196  Identities=25%  Similarity=0.351  Sum_probs=166.0

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccC-----Cc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDH-----NE  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~  326 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||||++...    ...+++.+|+.+++.++||||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            47899999999999999999996 46889999998542    3346789999999999999999999998766     57


Q ss_pred             eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          327 SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      .++||||++ ++|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~lv~e~~~-~~L~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             EEEEEECCS-EEHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCC-cCHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            899999986 59999984 4467999999999999999999999887   999999999999999999999999999876


Q ss_pred             cCCCC---------------------cccccccCCCCccCcccc-cCCCCCccccHHHHHHHHHHHHcCCCCC
Q 040363          407 DIGQS---------------------YVSSEVRGTFGYVDPEYR-RNHHVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       407 ~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      .....                     .......||+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            53321                     123556799999999985 5667999999999999999999865554


No 147
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=6.8e-40  Score=326.72  Aligned_cols=251  Identities=22%  Similarity=0.320  Sum_probs=203.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|.+...   ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            367999999999999999999964 6899999998533   345688999999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC-
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS-  411 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~-  411 (548)
                      |+++++|.+++. ....+++..++.++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++........ 
T Consensus        86 ~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           86 YCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             CCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             ecCCCcHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence            999999999984 3457899999999999999999999877   99999999999999999999999999987643321 


Q ss_pred             cccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                      .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...........   .. .....     ......
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~-~~~~~-----~~~~~~  232 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DW-KEKKT-----YLNPWK  232 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH---HH-HTTCT-----TSTTGG
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH---Hh-hhccc-----ccCchh
Confidence            22345679999999999987765 7899999999999999999999975543222111   11 11111     111123


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++++..+++.+|+   ..||++|||+.|++++
T Consensus       233 ~~~~~~~~li~~~l---~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          233 KIDSAPLALLHKIL---VENPSARITIPDIKKD  262 (276)
T ss_dssp             GSCHHHHHHHHHHS---CSSTTTSCCHHHHTTC
T ss_pred             hcCHHHHHHHHHHC---CCCchhCCCHHHHhcC
Confidence            56777666666655   5589999999999864


No 148
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=339.65  Aligned_cols=254  Identities=17%  Similarity=0.153  Sum_probs=201.0

Q ss_pred             hcCCccceeeeeecCceEEEEEE------EcCCcEEEEEEecCcchHHHHHHHHHhcccCC---CCceeeeecccccCCc
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGI------LSNGQQVAVKHIISDGYVDTFVREVRSLSHVQ---HPNLVALLSYCEDHNE  326 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~------~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~  326 (548)
                      ..++|.+.++||+|+||.||+|.      ..+++.||+|++... ...++.+|+.+++.++   |+||+++++++...+.
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            34789999999999999999994      457899999998654 3456777887777775   9999999999999999


Q ss_pred             eEEEEEecCCCChhHHhhh----ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC-----------
Q 040363          327 SFLVYELCHNGNLSEWLYG----KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA-----------  391 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~-----------  391 (548)
                      .++||||+++|+|.+++..    ....+++..++.++.|++.||+|||+.+   |+||||||+|||++.           
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccc
Confidence            9999999999999999964    3457999999999999999999999777   999999999999998           


Q ss_pred             CCCEEEEeccCcccccC-CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 040363          392 DFQAKLSDFGLSKVMDI-GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKM  470 (548)
Q Consensus       392 ~~~~kL~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~  470 (548)
                      ++.+||+|||+++.+.. ..........||+.|+|||++.+..++.++||||||+++|||++|+.||........     
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----  293 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-----  293 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----
Confidence            89999999999976542 223334556799999999999999999999999999999999999999853322110     


Q ss_pred             HHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCC-CCCHHHHHHHHHHhhhhhc
Q 040363          471 AKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQ-RPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       471 ~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~-RPT~~evl~~L~~~l~~~~  532 (548)
                              ....... ..  ..++...+++.+++   ..+|.+ +|+++++.+.|++.++...
T Consensus       294 --------~~~~~~~-~~--~~~~~~~~~~~~~l---~~~p~~r~~~~~~l~~~l~~~l~~~~  342 (365)
T 3e7e_A          294 --------KPEGLFR-RL--PHLDMWNEFFHVML---NIPDCHHLPSLDLLRQKLKKVFQQHY  342 (365)
T ss_dssp             --------EECSCCT-TC--SSHHHHHHHHHHHH---CCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             --------eechhcc-cc--CcHHHHHHHHHHHc---CCCCCCcchHHHHHHHHHHHHHHHhh
Confidence                    0001111 11  12334444444444   447755 5899999999999987643


No 149
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=5.6e-40  Score=330.37  Aligned_cols=248  Identities=25%  Similarity=0.370  Sum_probs=196.3

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      ++|.+.+.||+|+||.||++.. .+++.+|+|++...   ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            5799999999999999999996 46899999998543   3457899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhc---cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCccccc
Q 040363          334 CHNGNLSEWLYGK---AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       334 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~  407 (548)
                      +++++|.+++...   ...+++..++.++.|++.||.|||+.+   |+||||||+||++   +.++.+||+|||++....
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999988543   367999999999999999999999877   9999999999999   456789999999998765


Q ss_pred             CCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ...  ......||+.|+|||.+. ..++.++||||||+++|||++|+.||....     .............    ..+.
T Consensus       179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~----~~~~  246 (285)
T 3is5_A          179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-----LEEVQQKATYKEP----NYAV  246 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC----CCCC
T ss_pred             Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC-----HHHHHhhhccCCc----cccc
Confidence            332  234467999999999875 578999999999999999999999996432     3333332222211    1111


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ....++++..+++.+|+   ..||++|||+.|++++
T Consensus       247 ~~~~~~~~~~~li~~~L---~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          247 ECRPLTPQAVDLLKQML---TKDPERRPSAAQVLHH  279 (285)
T ss_dssp             --CCCCHHHHHHHHHHT---CSCTTTSCCHHHHHTS
T ss_pred             ccCcCCHHHHHHHHHHc---cCChhhCcCHHHHhcC
Confidence            12336777777666665   5689999999999863


No 150
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.2e-40  Score=338.62  Aligned_cols=254  Identities=24%  Similarity=0.307  Sum_probs=193.7

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcchH---HHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYV---DTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      ++|++.+.||+|+||.||+|... +++.||+|++......   ..+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999965 7899999998543221   2456799999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      ++ ++|.+++......+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...... ..
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~  156 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT  156 (324)
T ss_dssp             CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence            97 5999998777778999999999999999999999887   9999999999999999999999999998654322 22


Q ss_pred             cccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC------
Q 040363          414 SSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP------  486 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------  486 (548)
                      .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.....    ...........+.......+      
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~  232 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV----EEQLHFIFRILGTPTEETWPGILSNE  232 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCChHhchhhhcch
Confidence            234568999999998876 6789999999999999999999999964331    11111111111100000000      


Q ss_pred             ----------------CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          487 ----------------TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       487 ----------------~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                      .....+++++.+++.+|+   ..||++|||++|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLL---QFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHS---CSSGGGSCCHHHHTTS
T ss_pred             hhcccccccccchhhhhhcCCCCHHHHHHHHHHc---CcCcccCCCHHHHhcC
Confidence                            011245677777776666   5589999999999873


No 151
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=5.1e-40  Score=353.16  Aligned_cols=192  Identities=24%  Similarity=0.393  Sum_probs=153.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccc-----cCCc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCE-----DHNE  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~~~~  326 (548)
                      .++|++.++||+|+||.||+|.. .+++.||||++...    ...+++.+|+.+|+.++||||+++++++.     ..+.
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            47899999999999999999995 47899999998542    34567899999999999999999999984     3357


Q ss_pred             eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          327 SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      .|+||||+ +++|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       132 ~~lv~e~~-~~~L~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFR-TPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             EEEEECCC-SEEHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             EEEEEecc-ccchhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhc
Confidence            89999998 569999884 4467999999999999999999999887   999999999999999999999999999876


Q ss_pred             cCCCC--------------------------cccccccCCCCccCcccc-cCCCCCccccHHHHHHHHHHHHcC
Q 040363          407 DIGQS--------------------------YVSSEVRGTFGYVDPEYR-RNHHVSTSGDVYSFGVVLLQLLSG  453 (548)
Q Consensus       407 ~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDIwSlGvil~eLltG  453 (548)
                      .....                          ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            53221                          122445789999999976 566799999999999999999993


No 152
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=8.1e-40  Score=346.10  Aligned_cols=252  Identities=22%  Similarity=0.269  Sum_probs=192.0

Q ss_pred             cCCccce-eeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhccc-CCCCceeeeeccccc----CCceEE
Q 040363          257 TNNLSAS-NYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSH-VQHPNLVALLSYCED----HNESFL  329 (548)
Q Consensus       257 ~~~y~~~-~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~----~~~~~l  329 (548)
                      .++|.+. ++||+|+||.||++..+ +++.||||++...   ..+.+|+.++.+ .+||||+++++++..    .+..++
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            3567776 78999999999999964 6899999998643   356788888754 489999999998765    567899


Q ss_pred             EEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC---CCCEEEEeccCccc
Q 040363          330 VYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA---DFQAKLSDFGLSKV  405 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~---~~~~kL~DFGla~~  405 (548)
                      ||||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.   ++.+||+|||+++.
T Consensus       137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            999999999999996543 46999999999999999999999877   999999999999998   78899999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      .....  ......||+.|+|||++.+..++.++||||||+++|||++|+.||............. ..+..+. ..  ..
T Consensus       214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~-~~i~~~~-~~--~~  287 (400)
T 1nxk_A          214 TTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK-TRIRMGQ-YE--FP  287 (400)
T ss_dssp             CC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH-HHHHHTC-CC--CC
T ss_pred             cCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH-HHHHcCc-cc--CC
Confidence            54322  2345678999999999999999999999999999999999999997554332211111 1112111 11  11


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ......++.++.+++.+|+   ..||++|||+.|++++
T Consensus       288 ~~~~~~~s~~~~~li~~~L---~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          288 NPEWSEVSEEVKMLIRNLL---KTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTTTTTSCHHHHHHHHTTS---CSSGGGSCCHHHHHHS
T ss_pred             CcccccCCHHHHHHHHHHC---CCChhHCcCHHHHhcC
Confidence            1223456777666665555   5589999999999986


No 153
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.7e-40  Score=330.63  Aligned_cols=250  Identities=23%  Similarity=0.403  Sum_probs=203.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccccc------------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCED------------  323 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------------  323 (548)
                      ..+|++.+.||+|+||.||+|... +++.||+|.+....  +.+.+|+++++.++||||+++++++..            
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence            357999999999999999999975 79999999986543  357789999999999999999998754            


Q ss_pred             ----CCceEEEEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEE
Q 040363          324 ----HNESFLVYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLS  398 (548)
Q Consensus       324 ----~~~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~  398 (548)
                          ....++||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEEC
T ss_pred             cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEEC
Confidence                44579999999999999999654 357899999999999999999999877   9999999999999999999999


Q ss_pred             eccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC
Q 040363          399 DFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG  478 (548)
Q Consensus       399 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~  478 (548)
                      |||++.......  ......||+.|+|||.+.+..++.++||||||+++|||++|..|+..       .......+.   
T Consensus       165 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~-------~~~~~~~~~---  232 (284)
T 2a19_B          165 DFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE-------TSKFFTDLR---  232 (284)
T ss_dssp             CCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH-------HHHHHHHHH---
T ss_pred             cchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh-------HHHHHHHhh---
Confidence            999998765432  22345799999999999999999999999999999999999988631       111111111   


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          479 NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       479 ~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                            ...++..++.+..+++.+|+   ..||++|||+.|++++|+.+.+...
T Consensus       233 ------~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          233 ------DGIISDIFDKKEKTLLQKLL---SKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             ------TTCCCTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             ------cccccccCCHHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHhhCCC
Confidence                  12233456777666665554   4589999999999999998865443


No 154
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.7e-40  Score=341.83  Aligned_cols=249  Identities=23%  Similarity=0.314  Sum_probs=192.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCC--CceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQH--PNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||++...+++.||+|++...    ...+.+.+|+.+++.++|  |||+++++++.+++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4679999999999999999999888999999998532    334678999999999976  9999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      ||+ .+++|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++ ++.+||+|||+++......
T Consensus        88 ~e~-~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~  161 (343)
T 3dbq_A           88 MEC-GNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  161 (343)
T ss_dssp             ECC-CSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred             EeC-CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence            995 57899999954 467899999999999999999999887   99999999999997 5789999999998765433


Q ss_pred             Cc-ccccccCCCCccCcccccC-----------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC
Q 040363          411 SY-VSSEVRGTFGYVDPEYRRN-----------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG  478 (548)
Q Consensus       411 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~  478 (548)
                      .. ......||+.|+|||++.+           ..++.++||||||+++|||++|+.||.....   ....... .... 
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~~-~~~~-  236 (343)
T 3dbq_A          162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHA-IIDP-  236 (343)
T ss_dssp             --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHHHHH-HHCT-
T ss_pred             ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh---HHHHHHH-HhcC-
Confidence            22 2345679999999999864           6789999999999999999999999963221   1222221 1111 


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                          ......+...+.++.+++.+|+   ..||++|||+.|++++
T Consensus       237 ----~~~~~~~~~~~~~l~~li~~~L---~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          237 ----NHEIEFPDIPEKDLQDVLKCCL---KRDPKQRISIPELLAH  274 (343)
T ss_dssp             ----TSCCCCCCCSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             ----CcccCCcccCCHHHHHHHHHHc---CCChhHCCCHHHHHhC
Confidence                1112233344556555555544   4489999999999876


No 155
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-39  Score=337.39  Aligned_cols=256  Identities=24%  Similarity=0.303  Sum_probs=198.4

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc-------hHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG-------YVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~-------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      ..++|++.+.||+|+||.||+|.. .+|+.||+|++....       ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            357899999999999999999996 468999999985321       124678999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+++ +|.+++......+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            999999986 899988766677999999999999999999999887   9999999999999999999999999998765


Q ss_pred             CCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ... .......||+.|+|||++.+ ..++.++||||||+++|||++|..||....    ....+.+.....+.......+
T Consensus       164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~  238 (346)
T 1ua2_A          164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS----DLDQLTRIFETLGTPTEEQWP  238 (346)
T ss_dssp             SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCTTTSS
T ss_pred             CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHcCCCChhhhh
Confidence            332 22344678999999999865 458999999999999999999999886433    222222222221111000000


Q ss_pred             --------------------CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          487 --------------------TINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       487 --------------------~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                          .+...++.+..+++.+|+   ..||++|||+.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLF---LFNPCARITATQALKM  292 (346)
T ss_dssp             STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHH---CSSTTTSCCHHHHHTS
T ss_pred             hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHh---ccChhhCCCHHHHhcC
Confidence                                011345677777777776   6699999999999875


No 156
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.4e-39  Score=325.24  Aligned_cols=254  Identities=28%  Similarity=0.351  Sum_probs=204.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|++.+.||+|+||.||+|... ++..||+|++...  ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            367999999999999999999964 5779999998543  4467899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCcccccCCC
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~~~~  410 (548)
                      +++++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||++   +.++.+||+|||++.......
T Consensus        88 ~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~  163 (277)
T 3f3z_A           88 CTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK  163 (277)
T ss_dssp             CCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred             cCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence            999999998854 456899999999999999999999877   9999999999999   788899999999998765332


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                        ......||+.|+|||.+.+. ++.++||||||+++|+|++|+.||....     .......+..... .  .......
T Consensus       164 --~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-~--~~~~~~~  232 (277)
T 3f3z_A          164 --MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTF-T--FPEKDWL  232 (277)
T ss_dssp             --CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC-C--CCHHHHT
T ss_pred             --chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCC-C--CCchhhh
Confidence              23445799999999988664 8999999999999999999999996432     2223333322211 0  0111112


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH--HHHhh
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR--LEKAL  528 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~--L~~~l  528 (548)
                      .++++..+++.+|+   ..||++|||+.|++++  +++.+
T Consensus       233 ~~~~~~~~li~~~l---~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          233 NVSPQAESLIRRLL---TKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             TSCHHHHHHHHHHT---CSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             cCCHHHHHHHHHHc---cCChhhCcCHHHHhcCHHHhccc
Confidence            45677666666665   5589999999999874  44443


No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=2.8e-40  Score=356.31  Aligned_cols=195  Identities=24%  Similarity=0.337  Sum_probs=164.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccC------C
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDH------N  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~  325 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||||++...    ...+++.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            57899999999999999999995 46899999999543    3456788999999999999999999998654      4


Q ss_pred             ceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ..++||||+++ +|.+.+.   ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       141 ~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~  213 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART  213 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred             eEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence            56999999976 5666663   24889999999999999999999887   99999999999999999999999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                      ....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~  266 (464)
T 3ttj_A          214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  266 (464)
T ss_dssp             ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            6532  2334568999999999999999999999999999999999999999644


No 158
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=2.7e-40  Score=342.16  Aligned_cols=262  Identities=16%  Similarity=0.183  Sum_probs=196.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCcch-------------HHHHHHHHHhcccCCCCceeeeec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISDGY-------------VDTFVREVRSLSHVQHPNLVALLS  319 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~~~-------------~~~~~~E~~il~~l~hpnIv~l~~  319 (548)
                      .++|++.+.||+|+||.||+|...    ++..+|+|++.....             ...+.+|+..++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            368999999999999999999975    678999999854321             123667888899999999999999


Q ss_pred             cccc----CCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC--
Q 040363          320 YCED----HNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF--  393 (548)
Q Consensus       320 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~--  393 (548)
                      ++..    ....++||||+ +++|.+++... +.+++..++.++.|++.||.|||+.+   |+||||||+|||++.++  
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~  190 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPD  190 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTT
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCC
Confidence            9877    67889999999 99999999544 38999999999999999999999887   99999999999999887  


Q ss_pred             CEEEEeccCcccccCCCC------cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcH
Q 040363          394 QAKLSDFGLSKVMDIGQS------YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPL  467 (548)
Q Consensus       394 ~~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~  467 (548)
                      .+||+|||+++.+.....      .......||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  270 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV  270 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence            999999999987643221      11244679999999999999999999999999999999999999996432222212


Q ss_pred             HHHHHHHHhcCCcccccC-CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhh
Q 040363          468 DKMAKFVMRGGNIAKFAD-PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKAL  528 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d-~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l  528 (548)
                      .........  ....... ......++.+..+++.+++   ..+|++|||+++|++.|+++.
T Consensus       271 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          271 QTAKTNLLD--ELPQSVLKWAPSGSSCCEIAQFLVCAH---SLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHH--TTTHHHHHHSCTTSCCHHHHHHHHHHH---TCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHhhcc--cccHHHHhhccccccHHHHHHHHHHHh---hcCcccCCCHHHHHHHHhccC
Confidence            211111111  1111110 0111256667666655554   458999999999999998864


No 159
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=331.10  Aligned_cols=257  Identities=26%  Similarity=0.318  Sum_probs=193.8

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc----hHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG----YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ++|++.+.||+|+||.||+|... +|+.||+|++....    ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            68999999999999999999964 58999999885432    24567899999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY  412 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~  412 (548)
                      |+++++|.+++. ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++........ 
T Consensus        83 ~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  157 (311)
T 4agu_A           83 YCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-  157 (311)
T ss_dssp             CCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             eCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence            999999998874 4466899999999999999999999887   99999999999999999999999999987653322 


Q ss_pred             ccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH-----------HHhcCCc
Q 040363          413 VSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKF-----------VMRGGNI  480 (548)
Q Consensus       413 ~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~-----------~~~~~~~  480 (548)
                      ......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ....+.+.           .......
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFSTNQYF  236 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhccccccccccccccccc
Confidence            2334578999999998876 678999999999999999999999996443211 01111110           0000000


Q ss_pred             cc--ccCCCC-------CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          481 AK--FADPTI-------NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       481 ~~--~~d~~l-------~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..  ..++..       ...++.+..+++.+|+   ..||++|||++|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCL---HMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHC---CSSTTTSCCHHHHHTS
T ss_pred             ccCcCCCccccchhhhhcccccHHHHHHHHHHc---cCChhhcCCHHHHhcC
Confidence            00  001100       1245666666555554   4589999999999875


No 160
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.5e-39  Score=337.97  Aligned_cols=252  Identities=26%  Similarity=0.390  Sum_probs=202.2

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .++|++.+.||+|+||.||++... +++.||+|++..+   ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            468999999999999999999964 6899999998643   335678999999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      |+++++|.+++.. ...+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||++......  
T Consensus       112 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  185 (360)
T ss_dssp             CCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred             CCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence            9999999999954 45689999999999999999999974 6   999999999999999999999999999765322  


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCC---------------------------
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRP---------------------------  464 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~---------------------------  464 (548)
                       ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.......                           
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             2234579999999999999999999999999999999999999996433110                           


Q ss_pred             ----------CcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          465 ----------MPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       465 ----------~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                .........+...     .........++.+..+++.+|+   ..||++|||++|+++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNE-----PPPKLPSGVFSLEFQDFVNKCL---IKNPAERADLKQLMVH  325 (360)
T ss_dssp             ---------CCCHHHHHHHHHHS-----CCCCCCTTTSCHHHHHHHHHHH---CSSTTTSCCHHHHHTS
T ss_pred             cccccCCCCcccchhhhhHHhcc-----CCCCCCcccccHHHHHHHHHHh---hcChhhCCCHHHHhhC
Confidence                      0011111111111     0111122346777777777766   6699999999999875


No 161
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-39  Score=362.35  Aligned_cols=264  Identities=25%  Similarity=0.396  Sum_probs=208.6

Q ss_pred             cCCcccee-eeeecCceEEEEEEEc---CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          257 TNNLSASN-YIGQGVAGKVYKGILS---NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~-~LG~G~fg~Vy~a~~~---~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .+++.+.+ .||+|+||.||+|...   ++..||||++...   ...+.+.+|+.+|+.++||||+++++++.. +..++
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l  412 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML  412 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence            34555565 8999999999999864   4668999998643   356789999999999999999999999876 56899


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++|+|.+++......+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       413 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          413 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             EEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            99999999999999777778999999999999999999999877   999999999999999999999999999876543


Q ss_pred             CCccc--ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          410 QSYVS--SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       410 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      .....  ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....     ..+...+..+..      .
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~------~  558 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKR------M  558 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCC------C
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCC------C
Confidence            32221  22345689999999999999999999999999999998 9999964432     233333433321      2


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhhcCCCCCcc
Q 040363          487 TINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDISKTSNSYRS  539 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~~~~~~~~s  539 (548)
                      ..+...+++    +.+++..|+. +|++|||+.+|++.|+.+...........+
T Consensus       559 ~~p~~~~~~----l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~s  608 (613)
T 2ozo_A          559 ECPPECPPE----LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGS  608 (613)
T ss_dssp             CCCTTCCHH----HHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCSS
T ss_pred             CCCCcCCHH----HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCcc
Confidence            233345655    5556666776 899999999999999999877665544433


No 162
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.1e-39  Score=329.83  Aligned_cols=252  Identities=23%  Similarity=0.336  Sum_probs=202.0

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      ..++|++.+.||+|+||.||+|... +|+.||+|.+..+...+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC  106 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence            3478999999999999999999964 589999999977766778999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCccc
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVS  414 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  414 (548)
                      ++++|.+++......+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++........ ..
T Consensus       107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~  182 (314)
T 3com_A          107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KR  182 (314)
T ss_dssp             TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CB
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-cc
Confidence            999999999766678999999999999999999999887   99999999999999999999999999987653322 23


Q ss_pred             ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCH
Q 040363          415 SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSV  494 (548)
Q Consensus       415 ~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~  494 (548)
                      ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....    ... ......... ...   ...+..++.
T Consensus       183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~-~~~~~~~~~-~~~---~~~~~~~~~  253 (314)
T 3com_A          183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH----PMR-AIFMIPTNP-PPT---FRKPELWSD  253 (314)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC----HHH-HHHHHHHSC-CCC---CSSGGGSCH
T ss_pred             CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----hHH-HHHHHhcCC-Ccc---cCCcccCCH
Confidence            44578999999999999999999999999999999999999996332    111 112222211 111   112234566


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          495 EAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       495 ~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +..+++.+|+   ..||.+|||+.+++++
T Consensus       254 ~l~~li~~~l---~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          254 NFTDFVKQCL---VKSPEQRATATQLLQH  279 (314)
T ss_dssp             HHHHHHHHHT---CSCTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHc---cCChhhCcCHHHHHhC
Confidence            6666555554   4589999999999873


No 163
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=5.3e-40  Score=341.11  Aligned_cols=200  Identities=24%  Similarity=0.271  Sum_probs=175.7

Q ss_pred             HHhhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-chHHHHHHHHHhcccCC-----CCceeeeecccccCC
Q 040363          253 VYSATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-GYVDTFVREVRSLSHVQ-----HPNLVALLSYCEDHN  325 (548)
Q Consensus       253 ~~~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~-----hpnIv~l~~~~~~~~  325 (548)
                      .....++|++.++||+|+||.||+|.. .+++.||||++... ...+.+.+|+.+++.++     ||||+++++++...+
T Consensus        30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~  109 (360)
T 3llt_A           30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD  109 (360)
T ss_dssp             TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred             ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence            344568999999999999999999996 57899999998653 44567788999999886     999999999999999


Q ss_pred             ceEEEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC-------------
Q 040363          326 ESFLVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA-------------  391 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~-------------  391 (548)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.             
T Consensus       110 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~  185 (360)
T 3llt_A          110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRV  185 (360)
T ss_dssp             EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred             eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhcc
Confidence            999999999 889999996543 35899999999999999999999887   999999999999975             


Q ss_pred             ------------CCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCC
Q 040363          392 ------------DFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINL  459 (548)
Q Consensus       392 ------------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~  459 (548)
                                  ++.+||+|||+++.....    .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus       186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             TTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence                        788999999999865422    2346789999999999999999999999999999999999999964


Q ss_pred             C
Q 040363          460 G  460 (548)
Q Consensus       460 ~  460 (548)
                      .
T Consensus       262 ~  262 (360)
T 3llt_A          262 H  262 (360)
T ss_dssp             S
T ss_pred             C
Confidence            3


No 164
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2e-39  Score=325.46  Aligned_cols=245  Identities=24%  Similarity=0.350  Sum_probs=203.7

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|.+...     ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            368999999999999999999964 6789999998532     2346789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++...... 
T Consensus        93 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-  167 (284)
T 2vgo_A           93 LEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-  167 (284)
T ss_dssp             ECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred             EEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence            999999999999954 356899999999999999999999777   999999999999999999999999998765422 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                        ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+...       +..++.
T Consensus       168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~-------~~~~~~  233 (284)
T 2vgo_A          168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----HTETHRRIVNV-------DLKFPP  233 (284)
T ss_dssp             --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTT-------CCCCCT
T ss_pred             --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----HhHHHHHHhcc-------ccCCCC
Confidence              2234679999999999999999999999999999999999999996432     22222222221       223445


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++.+..+++.+|+   ..+|.+|||++|++++
T Consensus       234 ~~~~~~~~li~~~l---~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          234 FLSDGSKDLISKLL---RYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             TSCHHHHHHHHHHS---CSSGGGSCCHHHHHTC
T ss_pred             cCCHHHHHHHHHHh---hcCHhhCCCHHHHhhC
Confidence            56777766666665   5589999999999974


No 165
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-39  Score=340.89  Aligned_cols=250  Identities=24%  Similarity=0.360  Sum_probs=195.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCC------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN------  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~------  325 (548)
                      .++|++.+.||+|+||.||+|.. .+|+.||||++...    ...+++.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            47899999999999999999996 57999999998432    33567889999999999999999999987653      


Q ss_pred             ceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ..++||||+ +++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ  177 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence            459999999 7899999854  56899999999999999999999887   99999999999999999999999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC------
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG------  478 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~------  478 (548)
                      ....    .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.    ...+.......+      
T Consensus       178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~l~~i~~~~g~~~~~~  249 (367)
T 1cm8_A          178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH----LDQLKEIMKVTGTPPAEF  249 (367)
T ss_dssp             CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCHHH
T ss_pred             cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCCHHH
Confidence            5432    234678999999998877 7899999999999999999999999964431    111111111100      


Q ss_pred             -----------------CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 -----------------NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 -----------------~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                       .........+....++++.+++.+|+   ..||++|||+.|+++|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL---~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML---VLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS---CSSTTTSCCHHHHHHS
T ss_pred             HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHc---cCChhHCCCHHHHhcC
Confidence                             01111111233456788888888777   6699999999999985


No 166
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=3.2e-40  Score=340.77  Aligned_cols=240  Identities=25%  Similarity=0.331  Sum_probs=199.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc----------hHHHHHHHHHhcccCCCCceeeeecccccCC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG----------YVDTFVREVRSLSHVQHPNLVALLSYCEDHN  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~----------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~  325 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++....          ..+.+.+|+.+++.++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46899999999999999999995 578999999985432          2345778999999999999999999999999


Q ss_pred             ceEEEEEecCCC-ChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          326 ESFLVYELCHNG-NLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       326 ~~~lV~E~~~~g-sL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ..++||||+.+| +|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHH-TCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccce
Confidence            999999999776 9999984 4457999999999999999999999887   9999999999999999999999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      ......  ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.....                .... 
T Consensus       179 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------------~~~~-  239 (335)
T 3dls_A          179 YLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------------TVEA-  239 (335)
T ss_dssp             ECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------------GTTT-
T ss_pred             ECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------------HHhh-
Confidence            765432  2334679999999999988776 8899999999999999999999953210                0000 


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                       ....+..++++..+++.+|+   ..||++|||+.|++++
T Consensus       240 -~~~~~~~~~~~l~~li~~~L---~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          240 -AIHPPYLVSKELMSLVSGLL---QPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -CCCCSSCCCHHHHHHHHHHT---CSSGGGSCCHHHHHHC
T ss_pred             -ccCCCcccCHHHHHHHHHHc---cCChhhCcCHHHHhcC
Confidence             11223346777777666665   5589999999999986


No 167
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=8.1e-40  Score=333.32  Aligned_cols=258  Identities=24%  Similarity=0.272  Sum_probs=200.7

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC--cchHHHHHHHHHhcccCCCCceeeeecccc----cCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS--DGYVDTFVREVRSLSHVQHPNLVALLSYCE----DHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||++.. .+++.||+|++..  ....+.+.+|+.+++.++||||+++++++.    .....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46899999999999999999996 6799999998843  344567899999999999999999999986    3457899


Q ss_pred             EEEecCCCChhHHhhh---ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          330 VYELCHNGNLSEWLYG---KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      ||||+++++|.+++..   ....+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            9999999999999865   3567999999999999999999999887   999999999999999999999999998765


Q ss_pred             cCCCCc--------ccccccCCCCccCcccccCCC---CCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHH
Q 040363          407 DIGQSY--------VSSEVRGTFGYVDPEYRRNHH---VSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVM  475 (548)
Q Consensus       407 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~  475 (548)
                      ......        ......||+.|+|||.+.+..   ++.++||||||+++|||++|+.||.............   ..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~  261 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA---VQ  261 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH---HH
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH---hh
Confidence            321111        012245799999999987544   7899999999999999999999985322111122211   11


Q ss_pred             hcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhh
Q 040363          476 RGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALD  529 (548)
Q Consensus       476 ~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~  529 (548)
                      ..      ........++.+..+++.+|+   ..||.+|||+.+++++|+.+..
T Consensus       262 ~~------~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          262 NQ------LSIPQSPRHSSALWQLLNSMM---TVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             CC--------CCCCTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHTCC
T ss_pred             cc------CCCCccccCCHHHHHHHHHHh---hcChhhCCCHHHHHHHhhhcCC
Confidence            11      111222356666666555554   4589999999999999998753


No 168
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=5.2e-40  Score=337.77  Aligned_cols=255  Identities=24%  Similarity=0.319  Sum_probs=191.2

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc----hHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG----YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      ..++|++.++||+|+||.||+|.. .+++.||+|++....    ..+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            347899999999999999999995 478999999985432    234678999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc-----CCCCEEEEeccCccc
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN-----ADFQAKLSDFGLSKV  405 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~-----~~~~~kL~DFGla~~  405 (548)
                      |||+++ +|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++     .++.+||+|||+++.
T Consensus       112 ~e~~~~-~L~~~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          112 FEYAEN-DLKKYMDK-NPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EECCSE-EHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EecCCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            999975 99999854 456899999999999999999999887   99999999999994     445699999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ...... ......||+.|+|||++.+. .++.++||||||+++|||++|+.||....    ............+......
T Consensus       187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~  261 (329)
T 3gbz_A          187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS----EIDQLFKIFEVLGLPDDTT  261 (329)
T ss_dssp             HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCTTT
T ss_pred             cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC----HHHHHHHHHHHhCCCchhh
Confidence            653322 23345689999999998774 58999999999999999999999996433    2222222222111100000


Q ss_pred             C-------------CC---------CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          485 D-------------PT---------INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       485 d-------------~~---------l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .             +.         +...+++++.+++.+|+   ..||++|||++|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAML---EMDPVKRISAKNALEH  319 (329)
T ss_dssp             STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHT---CSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHc---cCChhhCCCHHHHhCC
Confidence            0             00         01125667666666665   5589999999999863


No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=8.3e-40  Score=327.57  Aligned_cols=254  Identities=24%  Similarity=0.312  Sum_probs=200.5

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc--------chHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD--------GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~--------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      ++|++.+.||+|+||.||++... +++.||+|.+...        ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            57999999999999999999975 6899999988532        13578999999999999999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC----CEEEEeccCcc
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF----QAKLSDFGLSK  404 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~----~~kL~DFGla~  404 (548)
                      +||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++    .+||+|||++.
T Consensus        85 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            99999999999999954 457899999999999999999999877   99999999999998877    79999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ......  ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+....   ...
T Consensus       161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~---~~~  230 (283)
T 3bhy_A          161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVN---YDF  230 (283)
T ss_dssp             ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTC---CCC
T ss_pred             eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhcc---cCC
Confidence            765332  2234568999999999999999999999999999999999999996432     222222222211   111


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH--HHHhh
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR--LEKAL  528 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~--L~~~l  528 (548)
                      ++......+.+..+++.+|+   ..+|++|||+.|++++  ++.+.
T Consensus       231 ~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          231 DEEYFSNTSELAKDFIRRLL---VKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CHHHHTTCCHHHHHHHHTTS---CSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             cchhcccCCHHHHHHHHHHc---cCCHhHCcCHHHHHhCHHHHHHH
Confidence            11222345655555444443   4489999999999984  45443


No 170
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2e-39  Score=332.60  Aligned_cols=261  Identities=26%  Similarity=0.383  Sum_probs=206.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE-----cCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCC--ce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-----SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN--ES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~  327 (548)
                      .++|++.+.||+|+||.||++..     .+++.||+|++...  ...+.+.+|+.+++.++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            36799999999999999999983     36899999998643  34567899999999999999999999876544  68


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~  196 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP  196 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence            9999999999999999776677999999999999999999999877   9999999999999999999999999998775


Q ss_pred             CCCCc--ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCC--------CCCC---cHHHHHHHH
Q 040363          408 IGQSY--VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGD--------NRPM---PLDKMAKFV  474 (548)
Q Consensus       408 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~--------~~~~---~~~~~~~~~  474 (548)
                      .....  ......++..|+|||.+.+..++.++||||||+++|||++|+.|+....        ....   ....+...+
T Consensus       197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (326)
T 2w1i_A          197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  276 (326)
T ss_dssp             SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence            44322  1233457888999999998899999999999999999999999885321        0000   011112222


Q ss_pred             HhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          475 MRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       475 ~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      ....      .+..+..++++..+    ++..|+. +|++|||+.|+++.|+++.+.
T Consensus       277 ~~~~------~~~~~~~~~~~l~~----li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          277 KNNG------RLPRPDGCPDEIYM----IMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HTTC------CCCCCTTCCHHHHH----HHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcCC------CCCCCCcccHHHHH----HHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            2211      12233456666555    4455555 899999999999999998764


No 171
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.1e-39  Score=364.62  Aligned_cols=248  Identities=25%  Similarity=0.320  Sum_probs=209.3

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccC-CCCceeeeecccccCCceE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~  328 (548)
                      ..++|++.++||+|+||.||+|..+ +++.||||++...     ...+.+.+|..++..+ +||+|+++++++.+.+..|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4578999999999999999999964 6889999998533     3456788999999988 7999999999999999999


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++|+|.+++.. .+.+++..++.++.|++.||.|||+.+   |+||||||+||||+.++.+||+|||+++....
T Consensus       419 lV~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~  494 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  494 (674)
T ss_dssp             EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred             EEEeCcCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence            99999999999999954 357999999999999999999999887   99999999999999999999999999986432


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      . ........||+.|+|||++.+..++.++||||||+++|||++|+.||...+     ...+.+.+...       ...+
T Consensus       495 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~-------~~~~  561 (674)
T 3pfq_A          495 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEH-------NVAY  561 (674)
T ss_dssp             T-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHSS-------CCCC
T ss_pred             C-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhC-------CCCC
Confidence            2 223456789999999999999999999999999999999999999996432     33344443332       2344


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCH-----HHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSM-----EQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~-----~evl~~  523 (548)
                      +..+++++.+++.+|+   ..||++||++     +||++|
T Consensus       562 p~~~s~~~~~li~~lL---~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          562 PKSMSKEAVAICKGLM---TKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             CTTSCHHHHHHHHHHS---CSSSTTCTTCSTTHHHHHHSS
T ss_pred             CccCCHHHHHHHHHHc---cCCHHHCCCCCCCcHHHHhcC
Confidence            5578899999888887   7799999997     777654


No 172
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=6.3e-40  Score=359.65  Aligned_cols=257  Identities=23%  Similarity=0.380  Sum_probs=209.8

Q ss_pred             hcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      ..++|++.++||+|+||.||+|.++++..||||++... ...+.+.+|+.+|+.++||||+++++++.+ +..++||||+
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~  343 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  343 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence            34689999999999999999999988889999999654 345689999999999999999999999876 6789999999


Q ss_pred             CCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          335 HNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       335 ~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      ++|+|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.........
T Consensus       344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  420 (535)
T 2h8h_A          344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  420 (535)
T ss_dssp             TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred             cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence            999999999643 346899999999999999999999877   9999999999999999999999999998765322222


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEY  492 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  492 (548)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||....     ..++...+..+..      ...+..+
T Consensus       421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~------~~~~~~~  489 (535)
T 2h8h_A          421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYR------MPCPPEC  489 (535)
T ss_dssp             TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-----HHHHHHHHHTTCC------CCCCTTC
T ss_pred             ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCC------CCCCCCC
Confidence            233457889999999999999999999999999999999 899985432     3333333333221      1223345


Q ss_pred             CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          493 SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       493 s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      +.++.    +++..|+. +|++|||+++|+++|++++...
T Consensus       490 ~~~l~----~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          490 PESLH----DLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CHHHH----HHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CHHHH----HHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            65544    45555665 8999999999999999987543


No 173
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=5.9e-40  Score=349.18  Aligned_cols=251  Identities=24%  Similarity=0.330  Sum_probs=192.1

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc----------hHHHHHHHHHhcccCCCCceeeeecccccC
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG----------YVDTFVREVRSLSHVQHPNLVALLSYCEDH  324 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~----------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~  324 (548)
                      ..++|.+.+.||+|+||.||+|.. .+++.||+|++....          ....+.+|+.+++.++||||+++++++.. 
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence            357999999999999999999996 468999999985431          12247899999999999999999999754 


Q ss_pred             CceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC---CEEEEecc
Q 040363          325 NESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF---QAKLSDFG  401 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~---~~kL~DFG  401 (548)
                      +..++||||+++++|.+++. ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++   .+||+|||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             CceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecc
Confidence            45799999999999999884 4467999999999999999999999877   99999999999997554   59999999


Q ss_pred             CcccccCCCCcccccccCCCCccCccccc---CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC
Q 040363          402 LSKVMDIGQSYVSSEVRGTFGYVDPEYRR---NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG  478 (548)
Q Consensus       402 la~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~  478 (548)
                      +++....  ........||+.|+|||++.   ...++.++||||||+++|+|++|+.||............    +.. +
T Consensus       288 ~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~----i~~-~  360 (419)
T 3i6u_A          288 HSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ----ITS-G  360 (419)
T ss_dssp             TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHH----HHT-T
T ss_pred             cceecCC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHH----Hhc-C
Confidence            9987653  22334567999999999875   367889999999999999999999999754433222211    111 1


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..  ...+.....+++++.+++.+|+   ..||++|||+.|++++
T Consensus       361 ~~--~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          361 KY--NFIPEVWAEVSEKALDLVKKLL---VVDPKARFTTEEALRH  400 (419)
T ss_dssp             CC--CCCHHHHTTSCHHHHHHHHHHS---CSSTTTSCCHHHHHHS
T ss_pred             CC--CCCchhhcccCHHHHHHHHHHc---cCChhHCcCHHHHhCC
Confidence            11  1112223456777777766665   5689999999999874


No 174
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.5e-42  Score=346.83  Aligned_cols=262  Identities=24%  Similarity=0.353  Sum_probs=190.4

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhccc--CCCCceeeeecccccCC----ceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSH--VQHPNLVALLSYCEDHN----ESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~----~~~lV~  331 (548)
                      ++|++.+.||+|+||.||+|.. +++.||||++... ....+.+|.+++..  ++||||+++++++...+    ..++||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~   80 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T-THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc-chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence            5799999999999999999987 5899999998654 34567778888777  78999999999987776    789999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhh--------hCCCCceEecccCCCCeeEcCCCCEEEEeccCc
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLH--------TYPEGCIIHRDIKPTNILINADFQAKLSDFGLS  403 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla  403 (548)
                      ||+++|+|.+++..  ..+++..++.++.|++.||.|||        +.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a  155 (303)
T 3gxj_A           81 DYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             ECCTTCCHHHHHHH--CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred             eccCCCCHHHHHhc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence            99999999999943  46888899999999999999999        767   999999999999999999999999999


Q ss_pred             ccccCCCCcc---cccccCCCCccCcccccCC------CCCccccHHHHHHHHHHHHcC----------CCCCCCCCCCC
Q 040363          404 KVMDIGQSYV---SSEVRGTFGYVDPEYRRNH------HVSTSGDVYSFGVVLLQLLSG----------QRVINLGDNRP  464 (548)
Q Consensus       404 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~eLltG----------~~pf~~~~~~~  464 (548)
                      +.........   .....||+.|+|||++.+.      .++.++||||||+++|||++|          +.||.......
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3gxj_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred             eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence            8765443321   2334799999999998776      455789999999999999999          55554332222


Q ss_pred             CcHHHHHHHHHhcCCcccccCCCCCCCC-CHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhhh
Q 040363          465 MPLDKMAKFVMRGGNIAKFADPTINGEY-SVEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~-s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      .....+.......     ...+.++..+ +.+..+.+.+++.+|+. ||++|||+.|+++.|+++.+..
T Consensus       236 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~  299 (303)
T 3gxj_A          236 PSVEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             CCCC-CHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred             ccHHHHHHHHHHh-----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence            2222222222111     1122222221 23667788999999987 7999999999999999887554


No 175
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=9.7e-40  Score=334.62  Aligned_cols=254  Identities=22%  Similarity=0.326  Sum_probs=199.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccCC-CCceeeeeccccc--CCceEEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHVQ-HPNLVALLSYCED--HNESFLVYE  332 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~--~~~~~lV~E  332 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++... ..+.+.+|+.+++.++ ||||+++++++.+  ....++|||
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            46899999999999999999995 57899999998643 3567899999999997 9999999999987  567899999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC-CEEEEeccCcccccCCCC
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF-QAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~-~~kL~DFGla~~~~~~~~  411 (548)
                      |+++++|.+++.    .+++..+..++.|++.||.|||+.+   |+||||||+|||++.++ .+||+|||+++.......
T Consensus       114 ~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~  186 (330)
T 3nsz_A          114 HVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  186 (330)
T ss_dssp             CCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred             ccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence            999999999883    4888999999999999999999887   99999999999999777 899999999987654332


Q ss_pred             cccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH---------HHHhc----
Q 040363          412 YVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAK---------FVMRG----  477 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~---------~~~~~----  477 (548)
                        .....||+.|+|||.+.+ ..++.++||||||+++|||++|+.||............+..         .+...    
T Consensus       187 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  264 (330)
T 3nsz_A          187 --YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  264 (330)
T ss_dssp             --CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             --cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence              344578999999999877 67899999999999999999999999644332211111111         11100    


Q ss_pred             -------------CCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          478 -------------GNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       478 -------------~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                   ..+...........+++++.+++.+|+   ..||++|||++|+++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL---RYDHQSRLTAREAMEH  320 (330)
T ss_dssp             CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTS---CSSGGGSCCHHHHHTS
T ss_pred             ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHh---cCCcccCCCHHHHhcC
Confidence                         011112222223336777666666655   5589999999999874


No 176
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=5.7e-40  Score=334.26  Aligned_cols=256  Identities=26%  Similarity=0.310  Sum_probs=196.1

Q ss_pred             CCccce-eeeeecCceEEEEEEE-cCCcEEEEEEecCc--chHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEEE
Q 040363          258 NNLSAS-NYIGQGVAGKVYKGIL-SNGQQVAVKHIISD--GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       258 ~~y~~~-~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      +.|.+. +.||+|+||.||+|.. .+++.||||++...  ...+.+.+|+.++.++ +||||+++++++.+++..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            578885 7899999999999994 57999999998543  3456889999999885 79999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC---EEEEeccCcccccCC
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ---AKLSDFGLSKVMDIG  409 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~---~kL~DFGla~~~~~~  409 (548)
                      |+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.   +||+|||++......
T Consensus        92 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           92 KMRGGSILSHIHK-RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             CCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             cCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            9999999999954 357899999999999999999999887   999999999999998776   999999998765422


Q ss_pred             CC------cccccccCCCCccCcccccC-----CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCc----------HH
Q 040363          410 QS------YVSSEVRGTFGYVDPEYRRN-----HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMP----------LD  468 (548)
Q Consensus       410 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~----------~~  468 (548)
                      ..      .......||+.|+|||++.+     ..++.++||||||+++|||++|+.||.........          ..
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  247 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN  247 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence            11      11223469999999999875     56899999999999999999999999755432211          11


Q ss_pred             HHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          469 KMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       469 ~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+...+.... ..  ........++.++.+++.+|+   ..||++|||+.|++++
T Consensus       248 ~~~~~i~~~~-~~--~~~~~~~~~~~~~~~li~~~L---~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          248 MLFESIQEGK-YE--FPDKDWAHISCAAKDLISKLL---VRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHCC-CC--CCHHHHTTSCHHHHHHHHHHS---CSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhccC-cc--cCchhcccCCHHHHHHHHHHh---hCChhhCCCHHHHhcC
Confidence            1222222221 10  001111345777777666665   5689999999999874


No 177
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.6e-39  Score=326.56  Aligned_cols=256  Identities=23%  Similarity=0.351  Sum_probs=198.2

Q ss_pred             CCccceeeeeecCceEEEEEEEc--CCc--EEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS--NGQ--QVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~--~g~--~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      ++|++.+.||+|+||.||+|.+.  +++  .||+|.+...     ...+.+.+|+.+++.++||||+++++++...+ .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            68999999999999999999853  333  6899988532     34568899999999999999999999988765 88


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +|+||+++++|.+++......+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++.....
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence            999999999999999776678999999999999999999999887   99999999999999999999999999987654


Q ss_pred             CCCc--ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          409 GQSY--VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       409 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      ....  ......+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     .......+.....     .
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~-----~  243 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQILHKIDKEGE-----R  243 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTSCC-----C
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-----HHHHHHHHHccCC-----C
Confidence            3322  2233567889999999998899999999999999999999 999986432     2333333333221     1


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhh
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~  530 (548)
                      +.....++.+..+++.+|+   ..+|++|||+.+++++|+++...
T Consensus       244 ~~~~~~~~~~l~~li~~~l---~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          244 LPRPEDCPQDIYNVMVQCW---AHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             CCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHC--
T ss_pred             CCCCcCcCHHHHHHHHHHc---cCCcccCcCHHHHHHHHHHhCcc
Confidence            2233456777666555554   45899999999999999987643


No 178
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=2.8e-40  Score=336.74  Aligned_cols=269  Identities=21%  Similarity=0.282  Sum_probs=200.2

Q ss_pred             HhhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEE
Q 040363          254 YSATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       254 ~~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ....++|++.+.||+|+||.||+|..++  .+|+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i  106 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI  106 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence            3345899999999999999999998743  5999988532    233567889999999999999999999999999999


Q ss_pred             EEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCC
Q 040363          330 VYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~  409 (548)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++ ++.+||+|||+++.....
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred             EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence            99999999999999766667999999999999999999999887   99999999999998 679999999998765322


Q ss_pred             C----CcccccccCCCCccCcccccC---------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHh
Q 040363          410 Q----SYVSSEVRGTFGYVDPEYRRN---------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMR  476 (548)
Q Consensus       410 ~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~  476 (548)
                      .    ........||+.|+|||.+..         ..++.++||||||+++|||++|+.||....     .....+....
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~  257 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQMGT  257 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHHHT
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHhcc
Confidence            1    112233468999999998864         457899999999999999999999996432     3333333332


Q ss_pred             cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCcccc
Q 040363          477 GGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYRSHR  541 (548)
Q Consensus       477 ~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~s~~  541 (548)
                      .. ..    ......++.+..+++.+|+   ..+|++|||+.+++++|+++.+.....++....|
T Consensus       258 ~~-~~----~~~~~~~~~~l~~li~~~l---~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~  314 (319)
T 2y4i_B          258 GM-KP----NLSQIGMGKEISDILLFCW---AFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFW  314 (319)
T ss_dssp             TC-CC----CCCCSSCCTTHHHHHHHHH---CSSTTTSCCHHHHHHHHTTC--------------
T ss_pred             CC-CC----CCCcCCCCHHHHHHHHHHh---cCChhhCcCHHHHHHHHHHHHHhhccCCCCcccc
Confidence            21 11    1112245666666665555   5589999999999999999988766655444433


No 179
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=8.4e-40  Score=344.78  Aligned_cols=248  Identities=23%  Similarity=0.338  Sum_probs=192.8

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCC--CCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQ--HPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .+|++.+.||+|+||.||++...+++.||||++...    ...+.+.+|+.+++.++  ||||+++++++..++..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            469999999999999999999878999999998532    34567899999999996  599999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      | +.+++|.+++... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++ ++.+||+|||+++.+.....
T Consensus       136 E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~  209 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT  209 (390)
T ss_dssp             E-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred             e-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence            9 5678999999544 57889999999999999999999777   99999999999995 57999999999987654332


Q ss_pred             c-ccccccCCCCccCcccccC-----------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC
Q 040363          412 Y-VSSEVRGTFGYVDPEYRRN-----------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN  479 (548)
Q Consensus       412 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~  479 (548)
                      . ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....   ....+ ..+.... 
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~~~~~-~~~~~~~-  284 (390)
T 2zmd_A          210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKL-HAIIDPN-  284 (390)
T ss_dssp             ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC---HHHHH-HHHHCTT-
T ss_pred             cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH---HHHHH-HHHhCcc-
Confidence            2 2345679999999998865           4689999999999999999999999963321   11222 2222111 


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          480 IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       480 ~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                          .....+...+.++.+++.+|+   ..||++|||+.|++++
T Consensus       285 ----~~~~~~~~~~~~~~~li~~~L---~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          285 ----HEIEFPDIPEKDLQDVLKCCL---KRDPKQRISIPELLAH  321 (390)
T ss_dssp             ----SCCCCCCCSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             ----ccCCCCccchHHHHHHHHHHc---ccChhhCCCHHHHhhC
Confidence                112223334566555555544   4589999999999875


No 180
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=2.1e-39  Score=335.73  Aligned_cols=199  Identities=26%  Similarity=0.476  Sum_probs=171.7

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeeccccc--------C
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCED--------H  324 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--------~  324 (548)
                      ++|++.+.||+|+||.||+|.. .+|+.||+|++...    .....+.+|+.+++.++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            6899999999999999999996 57899999988433    234578899999999999999999999876        3


Q ss_pred             CceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          325 NESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      +..++||||+++ +|.+.+......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence            468999999975 888887666678999999999999999999999887   9999999999999999999999999998


Q ss_pred             cccCCCC---cccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          405 VMDIGQS---YVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       405 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                      .+.....   .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  232 (351)
T 3mi9_A          173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN  232 (351)
T ss_dssp             ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence            7653222   22344678999999998876 56899999999999999999999998643


No 181
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=4.1e-39  Score=321.34  Aligned_cols=246  Identities=24%  Similarity=0.385  Sum_probs=195.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|.+.+.||+|+||.||+|... +++.||+|.+...     ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            478999999999999999999975 7999999998533     2345789999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++.......
T Consensus        90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  165 (276)
T 2h6d_A           90 MEYVSGGELFDYICK-HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  165 (276)
T ss_dssp             EECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred             EeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence            999999999999954 356899999999999999999999887   9999999999999999999999999998765332


Q ss_pred             CcccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                        ......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||....     .....+.+....       ..++
T Consensus       166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~-------~~~~  231 (276)
T 2h6d_A          166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKIRGGV-------FYIP  231 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC-------CCCC
T ss_pred             --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCc-------ccCc
Confidence              2234568999999999988765 689999999999999999999985432     333333333221       1233


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..++.+..+++.+|+   ..||++|||+.|++++
T Consensus       232 ~~~~~~l~~li~~~l---~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          232 EYLNRSVATLLMHML---QVDPLKRATIKDIREH  262 (276)
T ss_dssp             TTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHS
T ss_pred             hhcCHHHHHHHHHHc---cCChhhCCCHHHHHhC
Confidence            456777666665555   5589999999999985


No 182
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.9e-39  Score=328.75  Aligned_cols=247  Identities=24%  Similarity=0.343  Sum_probs=205.4

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      +.|++.+.||+|+||.||+|.. .+++.||+|.+...   ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            5799999999999999999995 46899999998533   3457899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      +++++|.+++.  ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++....... ..
T Consensus       102 ~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~  175 (303)
T 3a7i_A          102 LGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK  175 (303)
T ss_dssp             CTTEEHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CC
T ss_pred             CCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-cc
Confidence            99999999984  357899999999999999999999887   9999999999999999999999999998765332 22


Q ss_pred             cccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCC
Q 040363          414 SSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYS  493 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s  493 (548)
                      .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+...      ..+.+...++
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~------~~~~~~~~~~  244 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKN------NPPTLEGNYS  244 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHS------CCCCCCSSCC
T ss_pred             cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcC------CCCCCccccC
Confidence            344679999999999999999999999999999999999999985332     22222222221      1234555677


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCHHHHHHHH
Q 040363          494 VEAFDLVFKLALSCTGIKQQRPSMEQVVLRL  524 (548)
Q Consensus       494 ~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L  524 (548)
                      .+..+++.+|+   ..+|++|||+.|++++.
T Consensus       245 ~~l~~li~~~l---~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          245 KPLKEFVEACL---NKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             HHHHHHHHHHC---CSSGGGSCCHHHHTTCH
T ss_pred             HHHHHHHHHHc---CCChhhCcCHHHHhhCh
Confidence            77666555554   45899999999999863


No 183
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.8e-39  Score=337.01  Aligned_cols=244  Identities=25%  Similarity=0.348  Sum_probs=197.9

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      +.|+..+.||+|+||.||+|.. .+++.||||++...     ...+.+.+|+++++.++||||+++++++.+++..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4599999999999999999995 57999999998532     23457889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+. |+|.+++......+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++......  
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--  207 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--  207 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence            9997 5888888666678999999999999999999999887   999999999999999999999999999875422  


Q ss_pred             cccccccCCCCccCccccc---CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRR---NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                         ....||+.|+|||++.   ...++.++||||||+++|||++|+.||....    ..... ..+.....     ....
T Consensus       208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~----~~~~~-~~~~~~~~-----~~~~  274 (348)
T 1u5q_A          208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----AMSAL-YHIAQNES-----PALQ  274 (348)
T ss_dssp             ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHH-HHHHHSCC-----CCCC
T ss_pred             ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----hHHHH-HHHHhcCC-----CCCC
Confidence               3457999999999874   5678999999999999999999999985432    12222 22222211     1112


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ...++++..+++.+++   ..+|++|||+++++++
T Consensus       275 ~~~~~~~l~~li~~~l---~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          275 SGHWSEYFRNFVDSCL---QKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CTTSCHHHHHHHHHHT---CSSGGGSCCHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHc---ccChhhCcCHHHHhhC
Confidence            3345666555554443   4489999999999865


No 184
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=3.3e-39  Score=325.51  Aligned_cols=246  Identities=22%  Similarity=0.327  Sum_probs=203.4

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|.+.+.||+|+||.||++... +++.||+|.+...     ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            68999999999999999999965 5889999988533     34567889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++++|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++........
T Consensus        95 e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           95 ELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             ECCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             ecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            9999999999884 3457899999999999999999999877   99999999999999999999999999987653222


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                       ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+...       ...++..
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~-------~~~~~~~  237 (294)
T 2rku_A          171 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKN-------EYSIPKH  237 (294)
T ss_dssp             -CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTT-------CCCCCTT
T ss_pred             -ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhhc-------cCCCccc
Confidence             2344679999999999999999999999999999999999999996432     22222222221       1233445


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ++++..+++.+|+   ..+|++|||+.|++++
T Consensus       238 ~~~~~~~li~~~l---~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          238 INPVAASLIQKML---QTDPTARPTINELLND  266 (294)
T ss_dssp             SCHHHHHHHHHHT---CSSGGGSCCGGGGGGS
T ss_pred             cCHHHHHHHHHHc---ccChhhCcCHHHHhhC
Confidence            6777666665554   4589999999999985


No 185
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=2.7e-39  Score=350.32  Aligned_cols=248  Identities=30%  Similarity=0.357  Sum_probs=203.3

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecC----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIIS----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ++|++.++||+|+||.||++... +++.||+|++..    ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            57999999999999999999964 789999999842    3346688999999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc---CCCCEEEEeccCcccccCC
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN---ADFQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~---~~~~~kL~DFGla~~~~~~  409 (548)
                      |+++++|.+.+.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++   .++.+||+|||+++.....
T Consensus       102 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A          102 LYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             cCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            9999999998854 467999999999999999999999887   99999999999995   4567999999999876533


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                      .  ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||....     .....+.+..+..   ..+...+
T Consensus       178 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~---~~~~~~~  246 (486)
T 3mwu_A          178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKY---AFDLPQW  246 (486)
T ss_dssp             ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC---CSCSGGG
T ss_pred             C--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC---CCCCccc
Confidence            2  2344679999999999876 59999999999999999999999996432     2333333333211   1112223


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..+++++.+++.+|+   ..+|++|||+.|++++
T Consensus       247 ~~~s~~~~~li~~~L---~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          247 RTISDDAKDLIRKML---TFHPSLRITATQCLEH  277 (486)
T ss_dssp             GGSCHHHHHHHHHHT---CSSTTTSCCHHHHHHC
T ss_pred             CCCCHHHHHHHHHHc---CCChhhCcCHHHHhcC
Confidence            457888888777776   6699999999999986


No 186
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.7e-39  Score=350.88  Aligned_cols=249  Identities=26%  Similarity=0.333  Sum_probs=203.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---------------chHHHHHHHHHhcccCCCCceeeeecc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---------------GYVDTFVREVRSLSHVQHPNLVALLSY  320 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---------------~~~~~~~~E~~il~~l~hpnIv~l~~~  320 (548)
                      .++|.+.++||+|+||.||+|..+ +++.||+|++...               ...+.+.+|+.+++.++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            478999999999999999999964 6889999998532               234678999999999999999999999


Q ss_pred             cccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCC---CEEE
Q 040363          321 CEDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADF---QAKL  397 (548)
Q Consensus       321 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~---~~kL  397 (548)
                      +.+....++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++   .+||
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEE
Confidence            9999999999999999999999854 467999999999999999999999887   99999999999998876   6999


Q ss_pred             EeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc
Q 040363          398 SDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG  477 (548)
Q Consensus       398 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~  477 (548)
                      +|||++.......  ......||+.|+|||++. ..++.++||||||+++|+|++|+.||....     ...+...+..+
T Consensus       191 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~  262 (504)
T 3q5i_A          191 VDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN-----DQDIIKKVEKG  262 (504)
T ss_dssp             CCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC
T ss_pred             EECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC
Confidence            9999998765332  234567999999999887 469999999999999999999999996433     33344444333


Q ss_pred             CCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          478 GNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       478 ~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ...   .+...+..+++++.+++.+|+   ..||.+|||+.|++++
T Consensus       263 ~~~---~~~~~~~~~s~~~~~li~~~L---~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          263 KYY---FDFNDWKNISDEAKELIKLML---TYDYNKRCTAEEALNS  302 (504)
T ss_dssp             CCC---CCHHHHTTSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             CCC---CCccccCCCCHHHHHHHHHHc---CCChhHCCCHHHHhcC
Confidence            211   111122456788888777776   6699999999999875


No 187
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1.8e-39  Score=337.33  Aligned_cols=265  Identities=23%  Similarity=0.324  Sum_probs=199.3

Q ss_pred             chhhHHHHHhhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcc-------------hHHHHHHHHHhcccCCCC
Q 040363          246 LKIAIKEVYSATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG-------------YVDTFVREVRSLSHVQHP  312 (548)
Q Consensus       246 ~~~~~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~-------------~~~~~~~E~~il~~l~hp  312 (548)
                      .+....++....++|++.+.||+|+||.||+|...+|+.||||++....             ..+.+.+|+.+++.++||
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   89 (362)
T 3pg1_A           10 MRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP   89 (362)
T ss_dssp             HHHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred             HHHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence            3455677888889999999999999999999998889999999884321             136789999999999999


Q ss_pred             ceeeeecccc-----cCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCe
Q 040363          313 NLVALLSYCE-----DHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNI  387 (548)
Q Consensus       313 nIv~l~~~~~-----~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NI  387 (548)
                      ||+++++++.     .....++||||++ |+|.+++......+++..+..++.|++.||.|||+.+   |+||||||+||
T Consensus        90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NI  165 (362)
T 3pg1_A           90 NILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNI  165 (362)
T ss_dssp             TBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGE
T ss_pred             CccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHE
Confidence            9999999983     3446799999997 5888888766678999999999999999999999887   99999999999


Q ss_pred             eEcCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCc
Q 040363          388 LINADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMP  466 (548)
Q Consensus       388 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~  466 (548)
                      |++.++.+||+|||++......  .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.....    
T Consensus       166 l~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----  239 (362)
T 3pg1_A          166 LLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF----  239 (362)
T ss_dssp             EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----
T ss_pred             EEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH----
Confidence            9999999999999999764422  22344578999999998877 6789999999999999999999999964331    


Q ss_pred             HHHHHHHHHhcC---------------------CcccccC---CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHH
Q 040363          467 LDKMAKFVMRGG---------------------NIAKFAD---PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVL  522 (548)
Q Consensus       467 ~~~~~~~~~~~~---------------------~~~~~~d---~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~  522 (548)
                      ...........+                     .......   .......+++..+++.+|+   ..||++|||+.|+++
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKML---EFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHh---cCChhhCCCHHHHHc
Confidence            111111111000                     0000000   0112344666666666665   558999999999997


Q ss_pred             H
Q 040363          523 R  523 (548)
Q Consensus       523 ~  523 (548)
                      +
T Consensus       317 h  317 (362)
T 3pg1_A          317 H  317 (362)
T ss_dssp             S
T ss_pred             C
Confidence            5


No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=3.8e-39  Score=349.90  Aligned_cols=253  Identities=26%  Similarity=0.343  Sum_probs=203.6

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ++|++.++||+|+||.||+|..+ +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            57999999999999999999964 6889999998543    335678999999999999999999999999999999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC---CCEEEEeccCcccccCC
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD---FQAKLSDFGLSKVMDIG  409 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~---~~~kL~DFGla~~~~~~  409 (548)
                      |+++|+|.+.+.. ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.+   +.+||+|||++......
T Consensus       117 ~~~~g~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          117 CYKGGELFDEIIH-RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred             cCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence            9999999998853 467899999999999999999999887   9999999999999764   45999999999876533


Q ss_pred             CCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          410 QSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       410 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                      .  ......||+.|+|||++. ..++.++||||||+++|+|++|+.||....     ...+...+.....   ..+...+
T Consensus       193 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~---~~~~~~~  261 (494)
T 3lij_A          193 K--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-----DQEILRKVEKGKY---TFDSPEW  261 (494)
T ss_dssp             B--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC---CCCSGGG
T ss_pred             c--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC---CCCchhc
Confidence            2  234567999999999876 469999999999999999999999996433     2333333333221   1122233


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH--HHHhh
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR--LEKAL  528 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~--L~~~l  528 (548)
                      ..+++++.+++.+|+   ..+|++|||+.|++++  |.+..
T Consensus       262 ~~~s~~~~~li~~~L---~~dp~~R~s~~e~l~hp~~~~~~  299 (494)
T 3lij_A          262 KNVSEGAKDLIKQML---QFDSQRRISAQQALEHPWIKEMC  299 (494)
T ss_dssp             TTSCHHHHHHHHHHT---CSSTTTSCCHHHHHTCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHC---CCChhhCccHHHHhcCcccccCc
Confidence            457888888777776   6699999999999975  55543


No 189
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=4.3e-39  Score=326.52  Aligned_cols=249  Identities=25%  Similarity=0.345  Sum_probs=204.2

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc--hHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG--YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|.+.+.||+|+||.||++... +|+.||+|.+....  ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            367999999999999999999964 78999999986432  345688999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCcccccCCC
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~~~~  410 (548)
                      +++++|.+++.. .+.+++..+..++.|++.||.|||+.+   |+||||||+||++   +.++.+||+|||++...... 
T Consensus        88 ~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-  162 (304)
T 2jam_A           88 VSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-  162 (304)
T ss_dssp             CCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred             CCCccHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence            999999999854 457899999999999999999999877   9999999999999   77889999999998764322 


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                        ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+.....   ........
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~---~~~~~~~~  232 (304)
T 2jam_A          163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-----ESKLFEKIKEGYY---EFESPFWD  232 (304)
T ss_dssp             --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHCCC---CCCTTTTT
T ss_pred             --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCC---CCCccccc
Confidence              2234568999999999999999999999999999999999999986432     2233333333211   11223345


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++++..+++.+|+   ..||++|||+.|++++
T Consensus       233 ~~~~~~~~li~~~l---~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          233 DISESAKDFICHLL---EKDPNERYTCEKALSH  262 (304)
T ss_dssp             TSCHHHHHHHHHHH---CSSTTTSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHc---CCChhHCcCHHHHhcC
Confidence            67888777777776   6699999999999874


No 190
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=3.1e-39  Score=332.84  Aligned_cols=247  Identities=22%  Similarity=0.316  Sum_probs=204.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|.+.+.||+|+||.||++... +++.||+|.+...     ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            368999999999999999999964 5889999988533     3456788999999999999999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++.. ...+++.+++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++.......
T Consensus       120 ~e~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          120 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             ECCCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EecCCCCCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            999999999998843 467899999999999999999999887   9999999999999999999999999998765332


Q ss_pred             CcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCC
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTING  490 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  490 (548)
                       .......||+.|+|||++.+..++.++||||||+++|+|++|+.||....     .......+...       ...++.
T Consensus       196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~-------~~~~~~  262 (335)
T 2owb_A          196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKN-------EYSIPK  262 (335)
T ss_dssp             -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHT-------CCCCCT
T ss_pred             -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHhcC-------CCCCCc
Confidence             22344679999999999999999999999999999999999999996432     22222222221       123344


Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          491 EYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       491 ~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++++..+++.+|+   ..||++|||+.|++++
T Consensus       263 ~~~~~~~~li~~~l---~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          263 HINPVAASLIQKML---QTDPTARPTINELLND  292 (335)
T ss_dssp             TSCHHHHHHHHHHT---CSSGGGSCCGGGGGGS
T ss_pred             cCCHHHHHHHHHHc---cCChhHCcCHHHHhcC
Confidence            56777666665554   4589999999999974


No 191
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=4.5e-40  Score=332.20  Aligned_cols=258  Identities=22%  Similarity=0.350  Sum_probs=184.9

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ..++|++.+.||+|+||.||++.. .+++.||+|++...   ...+++.+|+.+++.++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            457999999999999999999994 57899999988543   33467889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhh-------ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          332 ELCHNGNLSEWLYG-------KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       332 E~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ||+++++|.+++..       ....+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            99999999999853       2456899999999999999999999877   9999999999999999999999999997


Q ss_pred             cccCCCC----cccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC-
Q 040363          405 VMDIGQS----YVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG-  478 (548)
Q Consensus       405 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~-  478 (548)
                      .......    .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||......    ........... 
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~  245 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQNDPP  245 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHHHHHHTSSCC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----hHHHHHhccCCC
Confidence            7643321    12234579999999999876 57899999999999999999999999654321    11111111110 


Q ss_pred             C-cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 N-IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ~-~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      . .....++.....++.+..+++.+|+   ..||++|||+.|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          246 SLETGVQDKEMLKKYGKSFRKMISLCL---QKDPEKRPTAAELLRH  288 (303)
T ss_dssp             CTTC-----CCCCCCCHHHHHHHHHHC---CSSGGGSCCHHHHHTS
T ss_pred             ccccccccchhhhhhhHHHHHHHHHHc---cCChhhCcCHHHHhhC
Confidence            0 1112223444566777665555544   4489999999999874


No 192
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=6.1e-39  Score=323.83  Aligned_cols=255  Identities=26%  Similarity=0.399  Sum_probs=199.8

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||+|..+ +++.||+|++...    ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   81 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence            368999999999999999999965 6899999998533    22367889999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          332 ELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      ||++ ++|.+++.... ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  157 (299)
T 2r3i_A           82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  157 (299)
T ss_dssp             ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence            9997 59999985543 46889999999999999999999887   9999999999999999999999999998765332


Q ss_pred             CcccccccCCCCccCcccccCCC-CCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc------
Q 040363          411 SYVSSEVRGTFGYVDPEYRRNHH-VSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF------  483 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------  483 (548)
                      . ......+|+.|+|||.+.+.. ++.++||||||+++|+|++|+.||....    ............+.....      
T Consensus       158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
T 2r3i_A          158 R-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS----EIDQLFRIFRTLGTPDEVVWPGVT  232 (299)
T ss_dssp             B-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             c-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHHHHhCCCchhhhhHhh
Confidence            2 223456899999999987765 7999999999999999999999996443    122222222221111100      


Q ss_pred             ----cCCCC-----------CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ----ADPTI-----------NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ----~d~~l-----------~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                          ..+.+           ...++.+..+++.+|+   ..||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~~~l~h  284 (299)
T 2r3i_A          233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML---HYDPNKRISAKAALAH  284 (299)
T ss_dssp             GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhc---CcCcccCCCHHHHhcC
Confidence                00111           1235677777666666   5689999999999873


No 193
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=2.1e-39  Score=350.84  Aligned_cols=248  Identities=28%  Similarity=0.390  Sum_probs=205.4

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecC-----cchHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIIS-----DGYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.++||+|+||.||++... +++.||||++..     ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            57999999999999999999964 789999999843     234678999999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCcccccC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~~  408 (548)
                      ||+.+++|.+++. ....+++..+..++.|++.||.|||+.+   |+||||||+|||+   +.++.+||+|||+++....
T Consensus       106 e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          106 EVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             CCCCSCBHHHHHH-TCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             ecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            9999999999885 4467999999999999999999999887   9999999999999   5678999999999987654


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      ..  ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||...+     .......+..+...   .....
T Consensus       182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~---~~~~~  250 (484)
T 3nyv_A          182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-----EYDILKKVEKGKYT---FELPQ  250 (484)
T ss_dssp             CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC---CCSGG
T ss_pred             cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC---CCCcc
Confidence            33  2234579999999999876 69999999999999999999999996432     23333333332211   11122


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +..+++++.+++.+|+   ..+|++|||+.|+++|
T Consensus       251 ~~~~s~~~~~li~~~L---~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          251 WKKVSESAKDLIRKML---TYVPSMRISARDALDH  282 (484)
T ss_dssp             GGGSCHHHHHHHHHHT---CSSGGGSCCHHHHHTS
T ss_pred             cccCCHHHHHHHHHHC---CCChhHCcCHHHHhhC
Confidence            3457888888777776   6699999999999975


No 194
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.7e-39  Score=324.62  Aligned_cols=242  Identities=21%  Similarity=0.326  Sum_probs=196.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccC-CCCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|++...    ....++.+|+..+..+ +||||+++++++.+++..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            367999999999999999999975 7999999998542    3456788999999999 999999999999999999999


Q ss_pred             EEecCCCChhHHhhhcc---CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC---------------
Q 040363          331 YELCHNGNLSEWLYGKA---GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD---------------  392 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~---------------  392 (548)
                      |||+++++|.+++....   ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.+               
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            99999999999995432   56899999999999999999999887   9999999999999844               


Q ss_pred             ----CCEEEEeccCcccccCCCCcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcH
Q 040363          393 ----FQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPL  467 (548)
Q Consensus       393 ----~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~  467 (548)
                          ..+||+|||++.......     ...||+.|+|||.+.+. .++.++||||||+++|+|++|.+|+...       
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------  234 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-------  234 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------
T ss_pred             cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------
Confidence                479999999998765322     23589999999998775 6678999999999999999998775321       


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..+ ..+.. +.     .+.++..++++..+++.+|+   ..||++|||+.|++++
T Consensus       235 ~~~-~~~~~-~~-----~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          235 DQW-HEIRQ-GR-----LPRIPQVLSQEFTELLKVMI---HPDPERRPSAMALVKH  280 (289)
T ss_dssp             HHH-HHHHT-TC-----CCCCSSCCCHHHHHHHHHHT---CSSGGGSCCHHHHHTC
T ss_pred             hHH-HHHHc-CC-----CCCCCcccCHHHHHHHHHHh---CCCcccCCCHHHHhhC
Confidence            111 11111 11     23445567777777666665   5589999999999864


No 195
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=3.5e-39  Score=330.74  Aligned_cols=260  Identities=23%  Similarity=0.331  Sum_probs=204.7

Q ss_pred             cCCccceeeeeecCceEEEEEEE------cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL------SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~  327 (548)
                      .++|++.+.||+|+||.||+|..      .+++.||+|.+...   ....++.+|+.+++.++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46899999999999999999983      35778999998533   3455788999999999999999999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc------CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC---CCEEEE
Q 040363          328 FLVYELCHNGNLSEWLYGKA------GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD---FQAKLS  398 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~---~~~kL~  398 (548)
                      ++||||+++++|.+++....      ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.+   ..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            99999999999999996543      35889999999999999999999887   9999999999999844   469999


Q ss_pred             eccCcccccCCCC-cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHh
Q 040363          399 DFGLSKVMDIGQS-YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMR  476 (548)
Q Consensus       399 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~  476 (548)
                      |||++........ .......||+.|+|||.+.+..++.++||||||+++|+|++ |+.||....     .......+..
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~  260 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLEFVTS  260 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHT
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-----HHHHHHHHhc
Confidence            9999986543322 22234568999999999998999999999999999999998 999985432     2333333333


Q ss_pred             cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcC
Q 040363          477 GGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKT  533 (548)
Q Consensus       477 ~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~  533 (548)
                      ..      .+..+..++.+..+++.+|+   ..+|.+|||+.+++++|+.+......
T Consensus       261 ~~------~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~~l~~~~~~~~~  308 (327)
T 2yfx_A          261 GG------RMDPPKNCPGPVYRIMTQCW---QHQPEDRPNFAIILERIEYCTQDPDV  308 (327)
T ss_dssp             TC------CCCCCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred             CC------CCCCCCCCCHHHHHHHHHHh---cCChhhCcCHHHHHHHHHHHhcCHHH
Confidence            22      12233456666555554444   44899999999999999998765543


No 196
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=8.9e-40  Score=342.52  Aligned_cols=244  Identities=16%  Similarity=0.144  Sum_probs=188.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecC-----cchHHHHHHHH---HhcccCCCCceeeee-------cc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIIS-----DGYVDTFVREV---RSLSHVQHPNLVALL-------SY  320 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~-----~~~~~~~~~E~---~il~~l~hpnIv~l~-------~~  320 (548)
                      .++|++.+.||+|+||.||+|.. .+|+.||||++..     ....+.+.+|+   .+++.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46799999999999999999995 5799999999842     23457889999   556666899999998       44


Q ss_pred             cccCC-----------------ceEEEEEecCCCChhHHhhhcc------CcchHHHHHHHHHHHHHHHHHhhhCCCCce
Q 040363          321 CEDHN-----------------ESFLVYELCHNGNLSEWLYGKA------GVLSWIQRLKIAIDSATGLWFLHTYPEGCI  377 (548)
Q Consensus       321 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~qia~aL~yLH~~~~~~I  377 (548)
                      +.+.+                 ..++||||+ +|+|.+++....      ..+++..++.++.|++.||+|||+.+   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            44332                 278999999 679999996432      23456888899999999999999887   9


Q ss_pred             EecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCC-----------CCCccccHHHHHHH
Q 040363          378 IHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNH-----------HVSTSGDVYSFGVV  446 (548)
Q Consensus       378 vH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDIwSlGvi  446 (548)
                      +||||||+|||++.++.+||+|||+++..+.    ......| +.|+|||++.+.           .++.++||||||++
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999986432    2334567 999999999887           89999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHH--HH
Q 040363          447 LLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVL--RL  524 (548)
Q Consensus       447 l~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~--~L  524 (548)
                      +|||++|+.||........              .....  .....++++..+++.+|+   ..||++|||+.|+++  .+
T Consensus       303 l~elltg~~Pf~~~~~~~~--------------~~~~~--~~~~~~~~~~~~li~~~L---~~dp~~Rpt~~e~l~hp~f  363 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGG--------------SEWIF--RSCKNIPQPVRALLEGFL---RYPKEDRLLPLQAMETPEY  363 (377)
T ss_dssp             HHHHHHSSCCC------CC--------------SGGGG--SSCCCCCHHHHHHHHHHT---CSSGGGCCCHHHHHTSHHH
T ss_pred             HHHHHHCCCCCcccccccc--------------hhhhh--hhccCCCHHHHHHHHHHc---CCCchhCCCHHHHhhChHH
Confidence            9999999999964332111              01111  112456777666666555   558999999999997  44


Q ss_pred             HHhh
Q 040363          525 EKAL  528 (548)
Q Consensus       525 ~~~l  528 (548)
                      +++.
T Consensus       364 ~~~~  367 (377)
T 3byv_A          364 EQLR  367 (377)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443


No 197
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.8e-39  Score=325.95  Aligned_cols=249  Identities=24%  Similarity=0.300  Sum_probs=185.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc----hHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG----YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||++.. .+++.||+|++....    ..+.+.++...++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46899999999999999999996 578999999985432    2223445555688889999999999999999999999


Q ss_pred             EecCCCChhHHhhh---ccCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          332 ELCHNGNLSEWLYG---KAGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       332 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ||+++ +|.+++..   ....+++..++.++.|++.||.|||+. +   |+||||||+||+++.++.+||+|||+++...
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            99975 88777643   456799999999999999999999986 7   9999999999999999999999999998765


Q ss_pred             CCCCcccccccCCCCccCcccc----cCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYR----RNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      ...  ......||+.|+|||.+    .+..++.++||||||+++|+|++|+.||....   .....+....... .    
T Consensus       162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~-~----  231 (290)
T 3fme_A          162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG---TPFQQLKQVVEEP-S----  231 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS---CHHHHHHHHHHSC-C----
T ss_pred             ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC---chHHHHHHHhccC-C----
Confidence            332  22334699999999996    56678999999999999999999999996432   2233333222221 1    


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                       .......++++..+++.+|+   ..+|++|||+.|++++
T Consensus       232 -~~~~~~~~~~~~~~li~~~l---~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          232 -PQLPADKFSAEFVDFTSQCL---KKNSKERPTYPELMQH  267 (290)
T ss_dssp             -CCCCTTTSCHHHHHHHHHHT---CSSGGGSCCHHHHTTS
T ss_pred             -CCcccccCCHHHHHHHHHHh---hcChhhCcCHHHHHhC
Confidence             11122356777666666555   5589999999999983


No 198
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=6e-39  Score=331.19  Aligned_cols=252  Identities=21%  Similarity=0.273  Sum_probs=202.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcch-------------------HHHHHHHHHhcccCCCCceeee
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGY-------------------VDTFVREVRSLSHVQHPNLVAL  317 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~-------------------~~~~~~E~~il~~l~hpnIv~l  317 (548)
                      .++|++.+.||+|+||.||+|.. +++.||+|.+.....                   .+.+.+|+.+++.++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            47999999999999999999999 999999999843311                   1789999999999999999999


Q ss_pred             ecccccCCceEEEEEecCCCChhHH------hhhc-cCcchHHHHHHHHHHHHHHHHHhhh-CCCCceEecccCCCCeeE
Q 040363          318 LSYCEDHNESFLVYELCHNGNLSEW------LYGK-AGVLSWIQRLKIAIDSATGLWFLHT-YPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       318 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~IvH~DlKp~NILl  389 (548)
                      ++++.+.+..++||||+++++|.++      +... ...+++..++.++.|++.||.|||+ .+   |+||||||+||++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~  185 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM  185 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence            9999999999999999999999998      5332 4679999999999999999999998 77   9999999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCC-CCCc-cccHHHHHHHHHHHHcCCCCCCCCCCCCCcH
Q 040363          390 NADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNH-HVST-SGDVYSFGVVLLQLLSGQRVINLGDNRPMPL  467 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-ksDIwSlGvil~eLltG~~pf~~~~~~~~~~  467 (548)
                      +.++.+||+|||++......   ......||+.|+|||.+.+. .++. ++||||||+++|||++|+.||......    
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----  258 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL----  258 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred             cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence            99999999999999876433   33456799999999999887 6766 999999999999999999999654321    


Q ss_pred             HHHHHHHHhcCCcccccC-------------CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          468 DKMAKFVMRGGNIAKFAD-------------PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d-------------~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ......+... ......+             ......++.+..+++.+|+   ..||++|||+.|++++
T Consensus       259 ~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L---~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          259 VELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFL---RKNPAERITSEDALKH  323 (348)
T ss_dssp             HHHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHC---CSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHc---cCChhhCCCHHHHhcC
Confidence            2222222221 1111100             0011446777666666555   4589999999999874


No 199
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=5.7e-39  Score=323.44  Aligned_cols=251  Identities=22%  Similarity=0.315  Sum_probs=190.8

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeeccccc-----------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCED-----------  323 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----------  323 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|.+... ...+.+.+|+.+++.++||||+++++++.+           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            35799999999999999999996 47899999998543 345678999999999999999999998754           


Q ss_pred             --CCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEecc
Q 040363          324 --HNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFG  401 (548)
Q Consensus       324 --~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFG  401 (548)
                        .+..++||||+++++|.+++......+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg  161 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFG  161 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCc
Confidence              45679999999999999999766667888999999999999999999887   9999999999999999999999999


Q ss_pred             CcccccCCC-------------CcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcH
Q 040363          402 LSKVMDIGQ-------------SYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPL  467 (548)
Q Consensus       402 la~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~  467 (548)
                      ++.......             ........||+.|+|||.+.+. .++.++||||||+++|||++   ||....    ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~----~~  234 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM----ER  234 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH----HH
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch----hH
Confidence            998764321             1122345689999999998764 78999999999999999998   443111    11


Q ss_pred             HHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          468 DKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       468 ~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ......+..   ......+.+....+....+++.+|+   ..||++|||+.|++++
T Consensus       235 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          235 VNILKKLRS---VSIEFPPDFDDNKMKVEKKIIRLLI---DHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHHHHS---TTCCCCTTCCTTTSHHHHHHHHHHT---CSSGGGSCCHHHHHHS
T ss_pred             HHHHHhccc---cccccCccccccchHHHHHHHHHHH---hcCcccCcCHHHHhCC
Confidence            122222221   1112223344445555555555544   4589999999999864


No 200
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.4e-39  Score=325.15  Aligned_cols=253  Identities=23%  Similarity=0.335  Sum_probs=200.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeeccc--ccCCceEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYC--EDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~--~~~~~~~l  329 (548)
                      .++|++.+.||+|+||.||++... +++.||+|.+...    ...+.+.+|+.+++.++||||+++++++  ......++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            468999999999999999999964 6899999998532    3456789999999999999999999987  44667899


Q ss_pred             EEEecCCCChhHHhhhc---cCcchHHHHHHHHHHHHHHHHHhhhCC--CCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          330 VYELCHNGNLSEWLYGK---AGVLSWIQRLKIAIDSATGLWFLHTYP--EGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ||||+++++|.+++...   ...+++..++.++.|++.||.|||+.+  ..+|+||||||+||+++.++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            99999999999999543   234899999999999999999999654  1239999999999999999999999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCccccc
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFA  484 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (548)
                      ....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....     .......+..+.      
T Consensus       165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~~------  232 (279)
T 2w5a_A          165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-----QKELAGKIREGK------  232 (279)
T ss_dssp             HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC------
T ss_pred             eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-----HHHHHHHHhhcc------
Confidence            7653321 2234568999999999999999999999999999999999999986432     233333333321      


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHH
Q 040363          485 DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRL  524 (548)
Q Consensus       485 d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L  524 (548)
                      .+.++..++.+..+++.+|+   ..+|++|||+.|+++++
T Consensus       233 ~~~~~~~~~~~l~~li~~~l---~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          233 FRRIPYRYSDELNEIITRML---NLKDYHRPSVEEILENP  269 (279)
T ss_dssp             CCCCCTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHTST
T ss_pred             cccCCcccCHHHHHHHHHHc---CCCcccCCCHHHHHhCh
Confidence            12344466777666665555   45899999999999765


No 201
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=2e-39  Score=333.13  Aligned_cols=251  Identities=22%  Similarity=0.298  Sum_probs=199.6

Q ss_pred             cCCccce-eeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccC-CCCceeeeecccccCCceEE
Q 040363          257 TNNLSAS-NYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       257 ~~~y~~~-~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l  329 (548)
                      .+.|.+. +.||+|+||.||+|... +++.||+|++...    .....+.+|+.+++.+ .||||+++++++.+.+..++
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l  106 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL  106 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence            4567777 89999999999999964 6899999998543    3456889999999999 56999999999999999999


Q ss_pred             EEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC---CCCEEEEeccCccc
Q 040363          330 VYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA---DFQAKLSDFGLSKV  405 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~---~~~~kL~DFGla~~  405 (548)
                      ||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+|||++.   ++.+||+|||+++.
T Consensus       107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~  183 (327)
T 3lm5_A          107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK  183 (327)
T ss_dssp             EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred             EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence            99999999999998543 357899999999999999999999877   999999999999988   78999999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      .....  ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....     .......+....   ....
T Consensus       184 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~---~~~~  253 (327)
T 3lm5_A          184 IGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED-----NQETYLNISQVN---VDYS  253 (327)
T ss_dssp             C-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC---CCCC
T ss_pred             cCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHHHhcc---cccC
Confidence            65332  2344679999999999999999999999999999999999999995433     222222222211   1122


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ......++.++.+++.+|+   ..||++|||++|++++
T Consensus       254 ~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          254 EETFSSVSQLATDFIQSLL---VKNPEKRPTAEICLSH  288 (327)
T ss_dssp             TTTTTTSCHHHHHHHHHHS---CSSGGGSCCHHHHTTC
T ss_pred             chhhcccCHHHHHHHHHHc---CCChhhCcCHHHHhCC
Confidence            2333456777666666655   5589999999999875


No 202
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2.9e-39  Score=349.69  Aligned_cols=271  Identities=20%  Similarity=0.210  Sum_probs=211.4

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccCCC-CceeeeecccccCCceEEEEEec
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHVQH-PNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      .++|++.++||+|+||.||+|.. .+++.||||++......+++.+|+++++.++| ++++.+..++.+.+..++||||+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            47899999999999999999995 57999999988665555678899999999976 56666666677788889999999


Q ss_pred             CCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE---cCCCCEEEEeccCcccccCCCC
Q 040363          335 HNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI---NADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       335 ~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl---~~~~~~kL~DFGla~~~~~~~~  411 (548)
                       +++|.+++......+++..++.++.||+.||.|||+.+   |+||||||+||||   +.++.+||+|||+++.+.....
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence             89999999766778999999999999999999999887   9999999999999   6889999999999987764432


Q ss_pred             c------ccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          412 Y------VSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       412 ~------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      .      ......||+.|+|||.+.+..++.++||||||++||||++|+.||....... ....+.+.....  ... ..
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~i~~~~--~~~-~~  237 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-KKQKYEKISEKK--VAT-SI  237 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-HHHHHHHHHHHH--HHS-CH
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh-HHHHHHHHhhcc--ccc-cH
Confidence            2      1235679999999999999999999999999999999999999997543221 111111111110  000 00


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhcCCCCCc
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISKTSNSYR  538 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~~~~~~~  538 (548)
                      ..+...++.++.+++.+++   ..+|++||++.+|++.|++++....-.....
T Consensus       238 ~~l~~~~p~~l~~li~~cl---~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~  287 (483)
T 3sv0_A          238 EALCRGYPTEFASYFHYCR---SLRFDDKPDYSYLKRLFRDLFIREGFQFDYV  287 (483)
T ss_dssp             HHHHTTSCHHHHHHHHHHH---TCCTTCCCCHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             HHHhcCCcHHHHHHHHHHh---cCChhhCcCHHHHHHHHHHHHHHcCCCccCC
Confidence            1122345666555554444   4489999999999999999987665444433


No 203
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=4.5e-39  Score=335.40  Aligned_cols=257  Identities=25%  Similarity=0.339  Sum_probs=198.9

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccC-----Cce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDH-----NES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~  327 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++...   ...+.+.+|+.+++.++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            46899999999999999999996 46889999998543   3346788999999999999999999988654     468


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+++ +|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       106 ~iv~e~~~~-~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          106 YIVQDLMET-DLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEEEECCSE-EHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEcccCc-CHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            999999974 99998843  46899999999999999999999887   9999999999999999999999999998765


Q ss_pred             CCCCc--ccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHH----------
Q 040363          408 IGQSY--VSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFV----------  474 (548)
Q Consensus       408 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~----------  474 (548)
                      .....  ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||....... ....+....          
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~  258 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNC  258 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHT
T ss_pred             CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHH
Confidence            33222  2345679999999998654 558999999999999999999999996543211 111111100          


Q ss_pred             ----------HhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          475 ----------MRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       475 ----------~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                .............+...+++++.+++.+|+   ..||++|||+.|++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML---TFNPHKRIEVEQALAH  314 (364)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHc---CCChhhCCCHHHHhcC
Confidence                      000000000011122346777777777776   6699999999999874


No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.1e-38  Score=333.08  Aligned_cols=252  Identities=28%  Similarity=0.408  Sum_probs=202.0

Q ss_pred             hhcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc----------hHHHHHHHHHhcccC-CCCceeeeecccc
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG----------YVDTFVREVRSLSHV-QHPNLVALLSYCE  322 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~----------~~~~~~~E~~il~~l-~hpnIv~l~~~~~  322 (548)
                      ...++|++.+.||+|+||.||+|.+. +|+.||||++....          ..+.+.+|+.+++.+ +||||+++++++.
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            34567999999999999999999975 79999999884321          135678999999999 7999999999999


Q ss_pred             cCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccC
Q 040363          323 DHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGL  402 (548)
Q Consensus       323 ~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGl  402 (548)
                      .....++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+   |+|+||||+|||++.++.+||+|||+
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             eCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCc
Confidence            99999999999999999999953 457899999999999999999999887   99999999999999999999999999


Q ss_pred             cccccCCCCcccccccCCCCccCcccccC------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHh
Q 040363          403 SKVMDIGQSYVSSEVRGTFGYVDPEYRRN------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMR  476 (548)
Q Consensus       403 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~  476 (548)
                      +..+....  ......||+.|+|||++.+      ..++.++||||||+++|||++|+.||....     .......+..
T Consensus       247 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~~~~i~~  319 (365)
T 2y7j_A          247 SCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----QILMLRMIME  319 (365)
T ss_dssp             CEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHH
T ss_pred             ccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHh
Confidence            98765332  2345679999999998753      368899999999999999999999995432     2222222222


Q ss_pred             cCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          477 GGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       477 ~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .. ..  .....+...+.+..+++.+|+   ..||++|||+.|++++
T Consensus       320 ~~-~~--~~~~~~~~~~~~~~~li~~~L---~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          320 GQ-YQ--FSSPEWDDRSSTVKDLISRLL---QVDPEARLTAEQALQH  360 (365)
T ss_dssp             TC-CC--CCHHHHSSSCHHHHHHHHHHS---CSSTTTSCCHHHHHHS
T ss_pred             CC-CC--CCCcccccCCHHHHHHHHHHc---CCChhHCcCHHHHhcC
Confidence            21 10  011112345666666666555   5589999999999874


No 205
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=9.1e-39  Score=334.92  Aligned_cols=259  Identities=23%  Similarity=0.273  Sum_probs=200.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-chHHHHHHHHHhcccCC--------CCceeeeecccc----
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-GYVDTFVREVRSLSHVQ--------HPNLVALLSYCE----  322 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~--------hpnIv~l~~~~~----  322 (548)
                      .++|++.++||+|+||.||+|+. .+++.||||++... ...+.+.+|+.+++.++        ||||+++++++.    
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            37899999999999999999995 56899999999654 34567889999999885        788999999987    


Q ss_pred             cCCceEEEEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEcCCC-------
Q 040363          323 DHNESFLVYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILINADF-------  393 (548)
Q Consensus       323 ~~~~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~~~~-------  393 (548)
                      .....++||||+ +++|.+.+... ...+++..++.++.|++.||.|||+. +   |+||||||+|||++.++       
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhh
Confidence            567889999999 55666665443 36799999999999999999999986 7   99999999999999775       


Q ss_pred             ------------------------------------------CEEEEeccCcccccCCCCcccccccCCCCccCcccccC
Q 040363          394 ------------------------------------------QAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRN  431 (548)
Q Consensus       394 ------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  431 (548)
                                                                .+||+|||++......    .....||+.|+|||++.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence                                                      7999999999876532    234578999999999999


Q ss_pred             CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcH--HHHHHHHHhcCCc---------------------ccccCCCC
Q 040363          432 HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPL--DKMAKFVMRGGNI---------------------AKFADPTI  488 (548)
Q Consensus       432 ~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~--~~~~~~~~~~~~~---------------------~~~~d~~l  488 (548)
                      ..++.++||||||+++|||++|+.||..........  ..+.......+..                     ....+...
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP  347 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence            999999999999999999999999997655443321  1111111111110                     00000000


Q ss_pred             ---------CCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHHH
Q 040363          489 ---------NGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ---------~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~  523 (548)
                               ....+.+..+.+..++.+|+. ||++|||+.|+++|
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence                     012345566667778888877 89999999999864


No 206
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.7e-39  Score=338.54  Aligned_cols=258  Identities=21%  Similarity=0.271  Sum_probs=196.0

Q ss_pred             hhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccccc----------
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCED----------  323 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----------  323 (548)
                      ...++|++.+.||+|+||.||+|.. .+|+.||+|++..+..  ...+|+.+++.++||||+++++++..          
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence            3467899999999999999999995 5799999999865422  23479999999999999999998833          


Q ss_pred             ----------------------------CCceEEEEEecCCCChhHHhhh---ccCcchHHHHHHHHHHHHHHHHHhhhC
Q 040363          324 ----------------------------HNESFLVYELCHNGNLSEWLYG---KAGVLSWIQRLKIAIDSATGLWFLHTY  372 (548)
Q Consensus       324 ----------------------------~~~~~lV~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qia~aL~yLH~~  372 (548)
                                                  ....++||||+++ +|.+.+..   ....+++..+..++.|++.||.|||+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL  160 (383)
T ss_dssp             ----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                                        3347899999984 88777642   356799999999999999999999977


Q ss_pred             CCCceEecccCCCCeeEc-CCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHH
Q 040363          373 PEGCIIHRDIKPTNILIN-ADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQL  450 (548)
Q Consensus       373 ~~~~IvH~DlKp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eL  450 (548)
                      +   |+||||||+|||++ .++.+||+|||+++......  ......||+.|+|||.+.+. .++.++||||||+++|||
T Consensus       161 g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (383)
T 3eb0_A          161 G---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL  235 (383)
T ss_dssp             T---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             c---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence            7   99999999999998 68899999999998765333  23445789999999988764 589999999999999999


Q ss_pred             HcCCCCCCCCCCCCCcHHHHHHHHHhcC------------CcccccC---------CCCCCCCCHHHHHHHHHHHHHhhC
Q 040363          451 LSGQRVINLGDNRPMPLDKMAKFVMRGG------------NIAKFAD---------PTINGEYSVEAFDLVFKLALSCTG  509 (548)
Q Consensus       451 ltG~~pf~~~~~~~~~~~~~~~~~~~~~------------~~~~~~d---------~~l~~~~s~~~~~ll~~ll~~C~~  509 (548)
                      ++|+.||....    ....+.+.+...+            ......-         ..++...++++.+++.+|+   ..
T Consensus       236 l~g~~pf~~~~----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~  308 (383)
T 3eb0_A          236 ILGKPLFSGET----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL---RY  308 (383)
T ss_dssp             HHSSCSSCCSS----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC---CS
T ss_pred             HhCCCCCCCCC----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc---cC
Confidence            99999996433    2222222211111            1111111         1133446777777777666   56


Q ss_pred             CCCCCCCHHHHHHH--HHHh
Q 040363          510 IKQQRPSMEQVVLR--LEKA  527 (548)
Q Consensus       510 dP~~RPT~~evl~~--L~~~  527 (548)
                      +|++|||+.|+++|  ++++
T Consensus       309 dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          309 EPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             SGGGSCCHHHHHTSGGGHHH
T ss_pred             ChhhCCCHHHHhcCHHHHHH
Confidence            89999999999864  4444


No 207
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=3.2e-39  Score=330.31  Aligned_cols=249  Identities=25%  Similarity=0.337  Sum_probs=195.3

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc----------hHHHHHHHHHhcccCCCCceeeeecccccCC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG----------YVDTFVREVRSLSHVQHPNLVALLSYCEDHN  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~----------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~  325 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||||.+....          ....+.+|+.+++.++||||+++++++..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            36799999999999999999996 468999999985431          1235789999999999999999999987654


Q ss_pred             ceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC---EEEEeccC
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ---AKLSDFGL  402 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~---~kL~DFGl  402 (548)
                       .++||||+++++|.+++. ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.   +||+|||+
T Consensus        89 -~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             -EEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             -eEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence             899999999999999884 4467899999999999999999999887   999999999999987665   99999999


Q ss_pred             cccccCCCCcccccccCCCCccCccccc---CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC
Q 040363          403 SKVMDIGQSYVSSEVRGTFGYVDPEYRR---NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN  479 (548)
Q Consensus       403 a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~  479 (548)
                      ++.....  .......||+.|+|||++.   ...++.++||||||+++|+|++|+.||............    +... .
T Consensus       164 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~-~  236 (322)
T 2ycf_A          164 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ----ITSG-K  236 (322)
T ss_dssp             CEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHH----HHHT-C
T ss_pred             ceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHH----HHhC-c
Confidence            9876432  2223456899999999863   567899999999999999999999999754433222211    1111 1


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHH
Q 040363          480 IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVL  522 (548)
Q Consensus       480 ~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~  522 (548)
                      ..  ..+.....++.+..+++.+|+   ..||++|||+.|+++
T Consensus       237 ~~--~~~~~~~~~~~~~~~li~~~l---~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          237 YN--FIPEVWAEVSEKALDLVKKLL---VVDPKARFTTEEALR  274 (322)
T ss_dssp             CC--CCHHHHTTSCHHHHHHHHHHS---CSSTTTSCCHHHHHT
T ss_pred             cc--cCchhhhhcCHHHHHHHHHHc---ccCHhhCCCHHHHhh
Confidence            11  112223456777666666655   558999999999985


No 208
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1e-39  Score=336.37  Aligned_cols=251  Identities=23%  Similarity=0.312  Sum_probs=196.9

Q ss_pred             hhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHh-cccCCCCceeeeecccccCCceEE
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRS-LSHVQHPNLVALLSYCEDHNESFL  329 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~l  329 (548)
                      ...++|++.+.||+|+||.||+|.. .+|+.||||++...   ....++..|..+ ++.++||||+++++++.+++..++
T Consensus        48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l  127 (340)
T 3an0_A           48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI  127 (340)
T ss_dssp             CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred             EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence            3457899999999999999999996 57999999998543   233455566655 778899999999999999999999


Q ss_pred             EEEecCCCChhHHhhh---ccCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          330 VYELCHNGNLSEWLYG---KAGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ||||+++ +|.+++..   ....+++..++.++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||+++.
T Consensus       128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  203 (340)
T 3an0_A          128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGY  203 (340)
T ss_dssp             EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred             EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence            9999976 99888753   456899999999999999999999975 7   99999999999999999999999999987


Q ss_pred             ccCCCCcccccccCCCCccCccccc----CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcc
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRR----NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIA  481 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  481 (548)
                      ....  .......||+.|+|||++.    ...++.++||||||+++|||++|+.||....   .....+.+.... ..  
T Consensus       204 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~---~~~~~~~~~~~~-~~--  275 (340)
T 3an0_A          204 LVDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG---TPFQQLKQVVEE-PS--  275 (340)
T ss_dssp             HSCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS---CHHHHHHHHHHS-CC--
T ss_pred             cccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc---chHHHHHHHhcC-CC--
Confidence            6422  2223357999999999864    4478999999999999999999999996432   122333222221 11  


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          482 KFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       482 ~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                         .......++.+..+++.+|+   ..+|++|||+.|++++
T Consensus       276 ---~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~ell~h  311 (340)
T 3an0_A          276 ---PQLPADKFSAEFVDFTSQCL---KKNSKERPTYPELMQH  311 (340)
T ss_dssp             ---CCCCGGGSCHHHHHHHHHHT---CSSGGGSCCHHHHTTS
T ss_pred             ---CCCCcccCCHHHHHHHHHHc---cCCcccCcCHHHHhcC
Confidence               11112345666666555554   4589999999999984


No 209
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.3e-39  Score=331.65  Aligned_cols=257  Identities=25%  Similarity=0.316  Sum_probs=184.3

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc--chHHHHHHHHHhcccCC-CCceeeeeccc--------ccC
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQ-HPNLVALLSYC--------EDH  324 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~--------~~~  324 (548)
                      ..+|++.++||+|+||.||++.. .+++.||+|++...  ...+.+.+|+.+++.+. ||||+++++++        ...
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            35899999999999999999996 47899999988443  34567889999999995 99999999987        344


Q ss_pred             CceEEEEEecCCCChhHHhhh--ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccC
Q 040363          325 NESFLVYELCHNGNLSEWLYG--KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGL  402 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGl  402 (548)
                      ...+++|||+. |+|.+++..  ....+++..++.++.|++.||.|||+.+ .+|+||||||+|||++.++.+||+|||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence            56799999996 699998854  3456999999999999999999999532 1299999999999999999999999999


Q ss_pred             cccccCCCCcc-----------cccccCCCCccCcccc---cCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 040363          403 SKVMDIGQSYV-----------SSEVRGTFGYVDPEYR---RNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLD  468 (548)
Q Consensus       403 a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~  468 (548)
                      ++.........           .....||+.|+|||++   .+..++.++||||||+++|||++|+.||.......    
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----  260 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----  260 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----
Confidence            98765432211           1134689999999998   56778999999999999999999999995332110    


Q ss_pred             HHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          469 KMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       469 ~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                          ....      ..........+.+..+++.+|+   ..+|++|||+.|++++|+.+.....
T Consensus       261 ----~~~~------~~~~~~~~~~~~~~~~li~~~l---~~~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          261 ----IVNG------KYSIPPHDTQYTVFHSLIRAML---QVNPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             ---------------CCCCTTCCSSGGGHHHHHHHS---CSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             ----hhcC------cccCCcccccchHHHHHHHHHc---cCChhhCcCHHHHHHHHHHHHhccC
Confidence                0000      1111122334455445444443   4489999999999999999986543


No 210
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.3e-38  Score=320.41  Aligned_cols=248  Identities=26%  Similarity=0.321  Sum_probs=194.8

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeeccccc----CCceE
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCED----HNESF  328 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~  328 (548)
                      ..|++.+.||+|+||.||+|.. .++..||+|.+...    ...+.+.+|+.+++.++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            4588899999999999999996 46889999998532    345678999999999999999999998754    45689


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc-CCCCEEEEeccCccccc
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN-ADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~-~~~~~kL~DFGla~~~~  407 (548)
                      +||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ .+|+||||||+||+++ .++.+||+|||++....
T Consensus       106 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            99999999999999953 467899999999999999999999543 2399999999999998 78999999999997654


Q ss_pred             CCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          408 IGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       408 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ..   ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||....    .............     ....
T Consensus       184 ~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~-----~~~~  250 (290)
T 1t4h_A          184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGV-----KPAS  250 (290)
T ss_dssp             TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTC-----CCGG
T ss_pred             cc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccC-----Cccc
Confidence            22   2334579999999998764 59999999999999999999999996432    2333333222211     1122


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .+...+++..+++.+|+   ..+|.+|||+.|++++
T Consensus       251 ~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          251 FDKVAIPEVKEIIEGCI---RQNKDERYSIKDLLNH  283 (290)
T ss_dssp             GGGCCCHHHHHHHHHHS---CSSGGGSCCHHHHHTS
T ss_pred             cCCCCCHHHHHHHHHHc---cCChhhCCCHHHHhhC
Confidence            33345566555555544   4489999999999864


No 211
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=3.9e-39  Score=325.74  Aligned_cols=251  Identities=22%  Similarity=0.303  Sum_probs=198.1

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEe
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|.+...  ...+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            468999999999999999999975 5899999998543  4467889999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcc
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYV  413 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~  413 (548)
                      +++++|.+++......+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++...... ...
T Consensus        98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~  173 (302)
T 2j7t_A           98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK  173 (302)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence            9999999998766678999999999999999999999877   999999999999999999999999987643211 111


Q ss_pred             cccccCCCCccCcccc-----cCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          414 SSEVRGTFGYVDPEYR-----RNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       414 ~~~~~gt~~y~aPE~~-----~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      .....||+.|+|||++     ....++.++||||||+++|+|++|+.||...+     ............. .   ....
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-~---~~~~  244 (302)
T 2j7t_A          174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDP-P---TLLT  244 (302)
T ss_dssp             -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC-C---CCSS
T ss_pred             cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCC-c---ccCC
Confidence            2335689999999987     46778999999999999999999999986432     1222222222211 1   1122


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +..++.+..+++.+|+   ..+|++|||+.+++++
T Consensus       245 ~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          245 PSKWSVEFRDFLKIAL---DKNPETRPSAAQLLEH  276 (302)
T ss_dssp             GGGSCHHHHHHHHHHS---CSCTTTSCCHHHHTTS
T ss_pred             ccccCHHHHHHHHHHc---ccChhhCCCHHHHhcC
Confidence            3345666666555554   4589999999999863


No 212
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=6.2e-39  Score=322.87  Aligned_cols=250  Identities=26%  Similarity=0.326  Sum_probs=195.7

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEec
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELC  334 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~  334 (548)
                      ++|.....||+|+||.||+|.. .+++.||+|.+...  ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            4566667999999999999995 56889999998543  34567899999999999999999999999999999999999


Q ss_pred             CCCChhHHhhhccC--cchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC-CCCEEEEeccCcccccCCCC
Q 040363          335 HNGNLSEWLYGKAG--VLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA-DFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       335 ~~gsL~~~l~~~~~--~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~-~~~~kL~DFGla~~~~~~~~  411 (548)
                      ++++|.+++.....  .+++..+..++.|++.||.|||+.+   |+|+||||+||+++. ++.+||+|||++....... 
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-  177 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-  177 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence            99999999965433  4568889999999999999999877   999999999999987 8999999999998764322 


Q ss_pred             cccccccCCCCccCcccccCCC--CCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHH--VSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTIN  489 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~--~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  489 (548)
                      .......||+.|+|||.+.+..  ++.++||||||+++|+|++|+.||......   ..........      ...+.++
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~------~~~~~~~  248 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMF------KVHPEIP  248 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---HHHHHHHHHH------CCCCCCC
T ss_pred             CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---hHHHHhhccc------ccccccc
Confidence            2233457899999999987643  889999999999999999999999533211   1111111111      1233445


Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          490 GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       490 ~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..++++..+++.+|+   ..||++|||+.|++++
T Consensus       249 ~~~~~~~~~li~~~l---~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          249 ESMSAEAKAFILKCF---EPDPDKRACANDLLVD  279 (295)
T ss_dssp             TTSCHHHHHHHHHTT---CSSTTTSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHHc---cCChhhCCCHHHHhcC
Confidence            566777666555544   4489999999999864


No 213
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.3e-39  Score=338.73  Aligned_cols=251  Identities=25%  Similarity=0.347  Sum_probs=182.1

Q ss_pred             hcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccC------
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDH------  324 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------  324 (548)
                      ..++|++.+.||+|+||.||+|.. .+|+.||||++...    ...+++.+|+.+++.++||||+++++++...      
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            357999999999999999999995 57899999998542    3456788999999999999999999988654      


Q ss_pred             CceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          325 NESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       325 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ...++++|++ +++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             CeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            5679999999 6899998843  57999999999999999999999887   9999999999999999999999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC-----
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG-----  478 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~-----  478 (548)
                      .....    .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...+.    ...+.......+     
T Consensus       181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~l~~i~~~~g~p~~~  252 (367)
T 2fst_X          181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAE  252 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCSCCHH
T ss_pred             ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHH
Confidence            75422    234678999999999877 6889999999999999999999999964431    111111111000     


Q ss_pred             ------------------CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 ------------------NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ------------------~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                        ..............++++.+++.+|+   ..||++|||+.|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL---~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML---VLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHS---CSSGGGSCCHHHHHTS
T ss_pred             HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhC---CCCcccCcCHHHHhcC
Confidence                              00000001112345777777777776   6699999999999875


No 214
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3.5e-38  Score=319.18  Aligned_cols=248  Identities=22%  Similarity=0.305  Sum_probs=198.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc------chHHHHHHHHHhcccCCCCceeeeeccc--ccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD------GYVDTFVREVRSLSHVQHPNLVALLSYC--EDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~--~~~~~~  327 (548)
                      .++|++.+.||+|+||.||++.. .+++.||+|.+...      ...+.+.+|+.+++.++||||+++++++  .+.+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            47899999999999999999996 46899999998543      3456789999999999999999999988  455678


Q ss_pred             EEEEEecCCCChhHHhhh-ccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          328 FLVYELCHNGNLSEWLYG-KAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      ++||||++++ |.+++.. ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++...
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence            9999999876 7676643 3457899999999999999999999887   999999999999999999999999999876


Q ss_pred             cCCC-CcccccccCCCCccCcccccCCC--CCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccc
Q 040363          407 DIGQ-SYVSSEVRGTFGYVDPEYRRNHH--VSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKF  483 (548)
Q Consensus       407 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (548)
                      .... ........||+.|+|||++.+..  ++.++||||||+++|||++|+.||....     .......+...      
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~------  228 (305)
T 2wtk_C          160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIGKG------  228 (305)
T ss_dssp             CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHC------
T ss_pred             CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHhcC------
Confidence            5322 22234467999999999987643  4789999999999999999999996432     33333333332      


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          484 ADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       484 ~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                       ...++..++++..+++.+|+   ..||++|||+.|++++
T Consensus       229 -~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          229 -SYAIPGDCGPPLSDLLKGML---EYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             -CCCCCSSSCHHHHHHHHHHT---CSSTTTSCCHHHHHHS
T ss_pred             -CCCCCCccCHHHHHHHHHHc---cCChhhCCCHHHHhcC
Confidence             12344567777777666665   5589999999999975


No 215
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=2e-39  Score=333.34  Aligned_cols=255  Identities=25%  Similarity=0.370  Sum_probs=194.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||++... +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            468999999999999999999964 5899999998433    22456789999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++++|.+++. ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++...... 
T Consensus       104 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  178 (331)
T 4aaa_A          104 EFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-  178 (331)
T ss_dssp             ECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             ecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence            9999988888763 4457999999999999999999999887   9999999999999999999999999998765332 


Q ss_pred             cccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHH--------------h
Q 040363          412 YVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVM--------------R  476 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~--------------~  476 (548)
                      .......||+.|+|||++.+. .++.++||||||+++|+|++|+.||.....    .........              .
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD----IDQLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHHHhCCCChhhhhHhhh
Confidence            223345789999999998775 789999999999999999999999964432    111111111              1


Q ss_pred             cCCcccccCCCC---------CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          477 GGNIAKFADPTI---------NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       477 ~~~~~~~~d~~l---------~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .........+.+         ...++++..+++.+|+   ..||++|||+.|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L---~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCL---HIDPDKRPFCAELLHH  307 (331)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHT---CSSGGGSCCGGGGGGS
T ss_pred             ccccccccCccccccchhhhcccchhHHHHHHHHHHh---ccCcccCCCHHHHhcC
Confidence            111111111111         1234666555555554   4589999999999875


No 216
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.4e-38  Score=319.34  Aligned_cols=249  Identities=30%  Similarity=0.406  Sum_probs=200.8

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----------chHHHHHHHHHhcccCC-CCceeeeeccccc
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----------GYVDTFVREVRSLSHVQ-HPNLVALLSYCED  323 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----------~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~  323 (548)
                      .++|++.+.||+|+||.||+|..+ +++.||+|.+...           ...+.+.+|+.+++.+. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            478999999999999999999964 6899999998532           12356789999999995 9999999999999


Q ss_pred             CCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCc
Q 040363          324 HNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLS  403 (548)
Q Consensus       324 ~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla  403 (548)
                      .+..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccch
Confidence            9999999999999999999954 457899999999999999999999887   999999999999999999999999999


Q ss_pred             ccccCCCCcccccccCCCCccCccccc------CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc
Q 040363          404 KVMDIGQSYVSSEVRGTFGYVDPEYRR------NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG  477 (548)
Q Consensus       404 ~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~  477 (548)
                      .......  ......||+.|+|||++.      ...++.++||||||+++|+|++|+.||....     .......+...
T Consensus       172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~  244 (298)
T 1phk_A          172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----QMLMLRMIMSG  244 (298)
T ss_dssp             EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHT
T ss_pred             hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-----HHHHHHHHhcC
Confidence            8765332  234457899999999874      4578899999999999999999999985432     22233333322


Q ss_pred             CCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHH
Q 040363          478 GNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVL  522 (548)
Q Consensus       478 ~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~  522 (548)
                      . ..  ........++.+..+++.+|+   ..||++|||+.|+++
T Consensus       245 ~-~~--~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          245 N-YQ--FGSPEWDDYSDTVKDLVSRFL---VVQPQKRYTAEEALA  283 (298)
T ss_dssp             C-CC--CCTTTGGGSCHHHHHHHHHHC---CSSGGGSCCHHHHTT
T ss_pred             C-cc--cCcccccccCHHHHHHHHHHc---cCCcccCCCHHHHHh
Confidence            1 11  111122346666666555554   458999999999986


No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.4e-39  Score=328.49  Aligned_cols=252  Identities=23%  Similarity=0.331  Sum_probs=194.1

Q ss_pred             hhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-chHHHHHHHHHhcccC-CCCceeeeeccccc------CC
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-GYVDTFVREVRSLSHV-QHPNLVALLSYCED------HN  325 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~------~~  325 (548)
                      ...++|++.+.||+|+||.||+|.. .+++.||+|++... ...+.+.+|+.+++.+ +||||+++++++..      .+
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            3467899999999999999999996 57899999998533 4456889999999999 79999999999876      46


Q ss_pred             ceEEEEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          326 ESFLVYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      ..++||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++.
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence            789999999999999999654 356899999999999999999999887   9999999999999999999999999998


Q ss_pred             cccCCCCcccccccCCCCccCccccc-----CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRR-----NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN  479 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~  479 (548)
                      ...... .......||+.|+|||++.     +..++.++||||||+++|+|++|+.||....    ... ....+.... 
T Consensus       178 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~-~~~~~~~~~-  250 (326)
T 2x7f_A          178 QLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH----PMR-ALFLIPRNP-  250 (326)
T ss_dssp             --------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC----HHH-HHHHHHHSC-
T ss_pred             ecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc----HHH-HHHHhhcCc-
Confidence            764322 1233457899999999986     5678999999999999999999999985332    112 222222211 


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          480 IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       480 ~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .    .......++.+..+++.+|+   ..||++|||+.+++++
T Consensus       251 ~----~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          251 A----PRLKSKKWSKKFQSFIESCL---VKNHSQRPATEQLMKH  287 (326)
T ss_dssp             C----CCCSCSCSCHHHHHHHHHHC---CSSGGGSCCHHHHHTS
T ss_pred             c----ccCCccccCHHHHHHHHHHh---ccChhhCCCHHHHhhC
Confidence            1    11223456777666655554   4589999999999884


No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1.3e-38  Score=356.96  Aligned_cols=259  Identities=24%  Similarity=0.377  Sum_probs=206.1

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc----CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCceE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS----NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~  328 (548)
                      ..++|++.+.||+|+||.||+|...    .+..||+|++...   ...+.+.+|+.+++.++||||+++++++. ++..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            3467999999999999999999963    2467999988543   33467899999999999999999999985 45689


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccC
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~  408 (548)
                      +||||+++|+|.+++......+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            999999999999999766667999999999999999999999887   99999999999999999999999999987754


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPT  487 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  487 (548)
                      ..........+|+.|+|||.+.+..++.++||||||+++|||++ |..||....     .......+....      .+.
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-----~~~~~~~i~~~~------~~~  612 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRIENGE------RLP  612 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHHTC------CCC
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHcCC------CCC
Confidence            44333444567889999999999999999999999999999997 999986432     233333333322      122


Q ss_pred             CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhhc
Q 040363          488 INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDISK  532 (548)
Q Consensus       488 l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~~  532 (548)
                      .+..++++..+++.+++   ..||++|||+.|+++.|+++++..+
T Consensus       613 ~~~~~~~~l~~li~~~l---~~dP~~RPs~~el~~~L~~il~~~k  654 (656)
T 2j0j_A          613 MPPNCPPTLYSLMTKCW---AYDPSRRPRFTELKAQLSTILEEEK  654 (656)
T ss_dssp             CCTTCCHHHHHHHHHHT---CSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCccccHHHHHHHHHHc---CCChhHCcCHHHHHHHHHHHHHHhc
Confidence            34456766655555444   4489999999999999999987543


No 219
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=4.5e-39  Score=340.34  Aligned_cols=200  Identities=23%  Similarity=0.390  Sum_probs=157.5

Q ss_pred             CCccc-eeeeeecCceEEEEEEEc---CCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccc--ccCCceEEEE
Q 040363          258 NNLSA-SNYIGQGVAGKVYKGILS---NGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYC--EDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~-~~~LG~G~fg~Vy~a~~~---~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~--~~~~~~~lV~  331 (548)
                      +.|++ .++||+|+||.||+|..+   +++.||+|++......+.+.+|+.+++.++||||+++++++  ......++||
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            44665 458999999999999965   57899999998776667899999999999999999999998  4577889999


Q ss_pred             EecCCCChhHHhhhc--------cCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE----cCCCCEEEEe
Q 040363          332 ELCHNGNLSEWLYGK--------AGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI----NADFQAKLSD  399 (548)
Q Consensus       332 E~~~~gsL~~~l~~~--------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl----~~~~~~kL~D  399 (548)
                      ||+++ +|.+++...        ...+++..++.++.|++.||.|||+.+   |+||||||+|||+    +.++.+||+|
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            99965 888877422        124899999999999999999999887   9999999999999    6778999999


Q ss_pred             ccCcccccCCCC--cccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCC
Q 040363          400 FGLSKVMDIGQS--YVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGD  461 (548)
Q Consensus       400 FGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~  461 (548)
                      ||+++.......  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus       176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            999987653322  22345679999999999877 458999999999999999999999996543


No 220
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.4e-38  Score=329.14  Aligned_cols=254  Identities=22%  Similarity=0.318  Sum_probs=195.0

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccC-----Cce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDH-----NES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~  327 (548)
                      .++|++.+.||+|+||.||+|... +|+.||||++...   .....+.+|+.+++.++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            478999999999999999999964 6899999998533   2345788999999999999999999987654     678


Q ss_pred             EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          328 FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                      ++||||+. ++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            99999997 589998843  56899999999999999999999887   9999999999999999999999999998765


Q ss_pred             CCCCc---------ccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc
Q 040363          408 IGQSY---------VSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG  477 (548)
Q Consensus       408 ~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~  477 (548)
                      .....         ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...+.    ...........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~  239 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY----RHQLLLIFGII  239 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHH
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHHHh
Confidence            32211         1233578999999998754 7889999999999999999999999964431    11111111100


Q ss_pred             CCc---------------------cccc---CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          478 GNI---------------------AKFA---DPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       478 ~~~---------------------~~~~---d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      +..                     ....   .......++++..+++.+|+   ..||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML---VFDPAKRITAKEALEH  306 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHS---CSSGGGSCCHHHHHTS
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhc---CcCcccCCCHHHHhcC
Confidence            000                     0000   00112356777666666665   5589999999999874


No 221
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=6.8e-39  Score=335.21  Aligned_cols=195  Identities=24%  Similarity=0.344  Sum_probs=161.7

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCC------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHN------  325 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~------  325 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||||++...    ...+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            47899999999999999999995 46899999998542    33467889999999999999999999987654      


Q ss_pred             ceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          326 ESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       326 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ..++||||+++ +|.+.+.   ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             ceEEEEEcCCC-CHHHHHh---hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence            67999999975 7888774   35889999999999999999999887   99999999999999999999999999987


Q ss_pred             ccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                      ....  .......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  229 (371)
T 2xrw_A          177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT  229 (371)
T ss_dssp             ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            6432  2234467999999999999999999999999999999999999999644


No 222
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.2e-38  Score=353.98  Aligned_cols=247  Identities=25%  Similarity=0.405  Sum_probs=197.1

Q ss_pred             eeeeecCceEEEEEEE---cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEEEecCC
Q 040363          264 NYIGQGVAGKVYKGIL---SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVYELCHN  336 (548)
Q Consensus       264 ~~LG~G~fg~Vy~a~~---~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~  336 (548)
                      +.||+|+||.||+|.+   ++++.||||++...    ...+++.+|+.+++.++|||||++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999974   34678999998643    235789999999999999999999999864 568899999999


Q ss_pred             CChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCc--cc
Q 040363          337 GNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSY--VS  414 (548)
Q Consensus       337 gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~  414 (548)
                      |+|.+++. ....+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+......  ..
T Consensus       454 g~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  529 (635)
T 4fl3_A          454 GPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  529 (635)
T ss_dssp             EEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             CCHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence            99999995 4467899999999999999999999887   999999999999999999999999999877543322  22


Q ss_pred             ccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCC
Q 040363          415 SEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYS  493 (548)
Q Consensus       415 ~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s  493 (548)
                      ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....     ...+...+..+.      ....+..++
T Consensus       530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~~~~~~i~~~~------~~~~p~~~~  598 (635)
T 4fl3_A          530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGE------RMGCPAGCP  598 (635)
T ss_dssp             -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC------CCCCCTTCC
T ss_pred             cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC------CCCCCCCCC
Confidence            33457889999999999999999999999999999998 999996433     333444443332      123344566


Q ss_pred             HHHHHHHHHHHHHhhC-CCCCCCCHHHHHHHHHHhhhh
Q 040363          494 VEAFDLVFKLALSCTG-IKQQRPSMEQVVLRLEKALDI  530 (548)
Q Consensus       494 ~~~~~ll~~ll~~C~~-dP~~RPT~~evl~~L~~~l~~  530 (548)
                      .+..+++    ..|+. ||++|||+.+|++.|+++...
T Consensus       599 ~~l~~li----~~cl~~dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          599 REMYDLM----NLCWTYDVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             HHHHHHH----HHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHH----HHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            6655544    45555 899999999999999998754


No 223
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=2.4e-39  Score=338.29  Aligned_cols=251  Identities=10%  Similarity=-0.021  Sum_probs=177.6

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcc-----hHHHHHHHHHhcccC--CCCceeeeeccc-------c
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDG-----YVDTFVREVRSLSHV--QHPNLVALLSYC-------E  322 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~-----~~~~~~~E~~il~~l--~hpnIv~l~~~~-------~  322 (548)
                      .+|++.+.||+|+||.||+|... +++.||+|++....     ..+.+.+|+.+++.+  +||||++++..+       .
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            46999999999999999999964 78999999996532     345677885544444  699988855332       2


Q ss_pred             cC-----------------CceEEEEEecCCCChhHHhhhccCcchHHHH------HHHHHHHHHHHHHhhhCCCCceEe
Q 040363          323 DH-----------------NESFLVYELCHNGNLSEWLYGKAGVLSWIQR------LKIAIDSATGLWFLHTYPEGCIIH  379 (548)
Q Consensus       323 ~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~------~~i~~qia~aL~yLH~~~~~~IvH  379 (548)
                      ..                 ...++||||++ ++|.+++......+++..+      ..++.|++.||+|||+.+   |+|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivH  217 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVH  217 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Ccc
Confidence            11                 34799999998 8999999765445555555      788899999999999887   999


Q ss_pred             cccCCCCeeEcCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccC--CCCCccccHHHHHHHHHHHHcCCCCC
Q 040363          380 RDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRN--HHVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       380 ~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      |||||+|||++.++.+||+|||+++..+..    .....+|+.|+|||++.+  ..++.++||||||+++|||++|+.||
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf  293 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF  293 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876421    113457799999999987  78999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHH
Q 040363          458 NLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVL  522 (548)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~  522 (548)
                      ............  .. .................++++..+++.+|+   ..||++|||+.|+++
T Consensus       294 ~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          294 GLVTPGIKGSWK--RP-SLRVPGTDSLAFGSCTPLPDFVKTLIGRFL---NFDRRRRLLPLEAME  352 (371)
T ss_dssp             TBCCTTCTTCCC--BC-CTTSCCCCSCCCTTSSCCCHHHHHHHHHHT---CSSTTTCCCHHHHTT
T ss_pred             CCcCcccccchh--hh-hhhhccccccchhhccCCCHHHHHHHHHHc---CCChhhCCCHHHHhc
Confidence            755322110000  00 000000001111112356777777666665   568999999999975


No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=3.8e-38  Score=321.95  Aligned_cols=255  Identities=26%  Similarity=0.370  Sum_probs=197.2

Q ss_pred             hcCCccceeeeeecCceEEEEEEE--cCCcEEEEEEecCc----chHHHHHHHHHhcccC---CCCceeeeecccc----
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGIL--SNGQQVAVKHIISD----GYVDTFVREVRSLSHV---QHPNLVALLSYCE----  322 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~--~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l---~hpnIv~l~~~~~----  322 (548)
                      ..++|++.+.||+|+||.||+|..  .+++.||+|++...    .....+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            347899999999999999999997  46889999988532    1223567788777766   8999999999986    


Q ss_pred             -cCCceEEEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEec
Q 040363          323 -DHNESFLVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDF  400 (548)
Q Consensus       323 -~~~~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DF  400 (548)
                       .....++||||++ ++|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence             5677899999997 59999986543 35899999999999999999999887   999999999999999999999999


Q ss_pred             cCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC-
Q 040363          401 GLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN-  479 (548)
Q Consensus       401 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~-  479 (548)
                      |+++.....  .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.....    ...+.+.....+. 
T Consensus       165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~  238 (326)
T 1blx_A          165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD----VDQLGKILDVIGLP  238 (326)
T ss_dssp             CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCC
T ss_pred             cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHHHcCCC
Confidence            999875422  223446789999999999999999999999999999999999999964431    2222222211110 


Q ss_pred             ----ccc--------------ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          480 ----IAK--------------FADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       480 ----~~~--------------~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                          +..              .....+...++.+..+++.+|+   ..||++|||+.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL---TFNPAKRISAYSALSH  297 (326)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHS---CSSTTTSCCHHHHHTS
T ss_pred             CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHc---CCCcccCCCHHHHhcC
Confidence                000              0001223456666666665555   4589999999999864


No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.1e-38  Score=339.34  Aligned_cols=251  Identities=25%  Similarity=0.324  Sum_probs=192.9

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeeccccc------CCceEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCED------HNESFLV  330 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~~lV  330 (548)
                      .+|++.+.||+|+||.||+|++. +|+.||||++..+..  ...+|+++++.++||||+++++++..      ....++|
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv  131 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV  131 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence            46999999999999999999974 699999999865432  34579999999999999999998743      2236789


Q ss_pred             EEecCCCChhHHhh---hccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC-CCEEEEeccCcccc
Q 040363          331 YELCHNGNLSEWLY---GKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD-FQAKLSDFGLSKVM  406 (548)
Q Consensus       331 ~E~~~~gsL~~~l~---~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~-~~~kL~DFGla~~~  406 (548)
                      |||+++ +|.+.+.   .....+++..++.++.|+++||.|||+.+   |+||||||+|||++.+ +.+||+|||+++..
T Consensus       132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            999976 6666553   23467999999999999999999999777   9999999999999965 56899999999876


Q ss_pred             cCCCCcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHh---------
Q 040363          407 DIGQSYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMR---------  476 (548)
Q Consensus       407 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~---------  476 (548)
                      .....  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....    ...+.+.+..         
T Consensus       208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~~lg~p~~~~~  281 (420)
T 1j1b_A          208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIKVLGTPTREQI  281 (420)
T ss_dssp             CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCHHHH
T ss_pred             ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHH
Confidence            53322  2346789999999998764 799999999999999999999999965431    2222222111         


Q ss_pred             ---cCCcccccCCC---------CCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          477 ---GGNIAKFADPT---------INGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       477 ---~~~~~~~~d~~---------l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                         ......+..+.         +....++++.+++.+|+   ..||++|||+.|+++|
T Consensus       282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L---~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL---EYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHS---CSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhc---cCChhHCCCHHHHhCC
Confidence               11111111111         23345778778777776   6699999999999874


No 226
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.3e-38  Score=338.00  Aligned_cols=197  Identities=27%  Similarity=0.293  Sum_probs=171.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc-hHHHHHHHHHhcccC------CCCceeeeecccccCCceE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG-YVDTFVREVRSLSHV------QHPNLVALLSYCEDHNESF  328 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~-~~~~~~~E~~il~~l------~hpnIv~l~~~~~~~~~~~  328 (548)
                      ..+|++.++||+|+||.||+|.. .+++.||||++..+. ..+.+.+|+.+++.+      +|+||+++++++...+..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            46899999999999999999986 458999999996553 345677888887776      5789999999999999999


Q ss_pred             EEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC--EEEEeccCccc
Q 040363          329 LVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ--AKLSDFGLSKV  405 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~--~kL~DFGla~~  405 (548)
                      +||||+. ++|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.  +||+|||++..
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeeccccee
Confidence            9999996 59999886543 45899999999999999999999887   999999999999999987  99999999976


Q ss_pred             ccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCC
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGD  461 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~  461 (548)
                      ....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus       252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            5422    234578999999999999999999999999999999999999996443


No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.3e-38  Score=336.14  Aligned_cols=252  Identities=23%  Similarity=0.301  Sum_probs=192.5

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecccccCC------ceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSYCEDHN------ESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~------~~~lV~  331 (548)
                      .+|++.++||+|+||.||+|....+..||+|++..+..  ...+|+.+++.++||||+++++++....      ..++||
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence            57999999999999999999987777799998865432  2347999999999999999999985433      378999


Q ss_pred             EecCCCChhHHh--hhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc-CCCCEEEEeccCcccccC
Q 040363          332 ELCHNGNLSEWL--YGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN-ADFQAKLSDFGLSKVMDI  408 (548)
Q Consensus       332 E~~~~gsL~~~l--~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~-~~~~~kL~DFGla~~~~~  408 (548)
                      ||++++.+....  ......+++..++.++.|++.||.|||+.+   |+||||||+|||++ .++.+||+|||+++....
T Consensus       118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~  194 (394)
T 4e7w_A          118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA  194 (394)
T ss_dssp             ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence            999875433332  123567899999999999999999999887   99999999999999 789999999999987653


Q ss_pred             CCCcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC---------
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG---------  478 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~---------  478 (548)
                      ...  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.    ...+.......+         
T Consensus       195 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~l~~i~~~~g~p~~~~~~~  268 (394)
T 4e7w_A          195 GEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG----IDQLVEIIKVLGTPSREQIKT  268 (394)
T ss_dssp             TCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCHHHHHH
T ss_pred             CCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHHHh
Confidence            332  3345789999999988664 689999999999999999999999964431    122211111100         


Q ss_pred             ---CcccccC---------CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 ---NIAKFAD---------PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ---~~~~~~d---------~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                         +.....-         ..++...++++.+++.+|+   ..||++|||+.|+++|
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLL---EYTPSARLTAIEALCH  322 (394)
T ss_dssp             HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC---CSSGGGSCCHHHHHTS
T ss_pred             hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHh---CCChhhCCCHHHHhcC
Confidence               0000000         1123346777777777766   5689999999999986


No 228
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2.6e-38  Score=330.77  Aligned_cols=249  Identities=24%  Similarity=0.346  Sum_probs=193.9

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCce----
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNES----  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~----  327 (548)
                      .++|.+.+.||+|+||.||+|.. .+|+.||+|++...    ...+.+.+|+.+++.++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            47899999999999999999996 46899999998643    2346788999999999999999999999877655    


Q ss_pred             --EEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          328 --FLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       328 --~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                        ++||||+. ++|.+++.   ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  193 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH  193 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred             eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence              99999997 58888773   34899999999999999999999887   99999999999999999999999999986


Q ss_pred             ccCCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC-----
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN-----  479 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~-----  479 (548)
                      ....    .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...+    ....+.......+.     
T Consensus       194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~  265 (371)
T 4exu_A          194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD----YLDQLTQILKVTGVPGTEF  265 (371)
T ss_dssp             ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCHHH
T ss_pred             cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHHhCCCcHHH
Confidence            5432    234578999999999877 789999999999999999999999996433    11211111111100     


Q ss_pred             ------------------cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          480 ------------------IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       480 ------------------~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                        ........+...+++++.+++.+|+   ..||++|||+.|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML---ELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHS---CSCTTTSCCHHHHHTS
T ss_pred             HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHC---CCChhhcCCHHHHhcC
Confidence                              0000001112345777777777766   5689999999999876


No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=6.6e-38  Score=315.13  Aligned_cols=249  Identities=29%  Similarity=0.354  Sum_probs=201.3

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|++...    ...+.+.+|+.+++.++||||+++++++.+.+..++|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            468999999999999999999975 7899999998432    34678999999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC---CCEEEEeccCcccccC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD---FQAKLSDFGLSKVMDI  408 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~---~~~kL~DFGla~~~~~  408 (548)
                      ||+++++|.+++.. ...+++..++.++.|++.||.|||+.+   ++||||||+||+++.+   +.+||+|||++.....
T Consensus       101 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A          101 ELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             CCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred             EccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence            99999999998854 357899999999999999999999877   9999999999999764   4699999999987653


Q ss_pred             CCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCC
Q 040363          409 GQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTI  488 (548)
Q Consensus       409 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  488 (548)
                      ...  .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||....     .....+.+..+...   .+...
T Consensus       177 ~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~---~~~~~  245 (287)
T 2wei_A          177 NTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKYA---FDLPQ  245 (287)
T ss_dssp             CSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC---CCSGG
T ss_pred             CCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC---CCchh
Confidence            322  233468999999998876 48999999999999999999999996432     23333333332211   11112


Q ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          489 NGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       489 ~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ...++++..+++.+|+   ..+|++|||+.|++++
T Consensus       246 ~~~~~~~~~~li~~~l---~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          246 WRTISDDAKDLIRKML---TFHPSLRITATQCLEH  277 (287)
T ss_dssp             GTTSCHHHHHHHHHHT---CSSGGGSCCHHHHHHS
T ss_pred             hhhcCHHHHHHHHHHc---ccChhhCcCHHHHhcC
Confidence            2356777766666665   5589999999999984


No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=8.2e-38  Score=324.17  Aligned_cols=249  Identities=24%  Similarity=0.339  Sum_probs=194.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc----chHHHHHHHHHhcccCCCCceeeeecccccCCc-----
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNE-----  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-----  326 (548)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||++...    ...+.+.+|+.+++.++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            47899999999999999999996 46899999998543    234678899999999999999999999877654     


Q ss_pred             -eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          327 -SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       327 -~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                       .++||||++ ++|.+++.   ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.
T Consensus       103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH  175 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred             eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence             499999997 58888773   34899999999999999999999887   99999999999999999999999999986


Q ss_pred             ccCCCCcccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc-------
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG-------  477 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~-------  477 (548)
                      ....    .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+.    ...+.......       
T Consensus       176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~  247 (353)
T 3coi_A          176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY----LDQLTQILKVTGVPGTEF  247 (353)
T ss_dssp             ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH----HHHHHHHHHHHCBCCHHH
T ss_pred             CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHH
Confidence            5422    234578999999998877 6889999999999999999999999964431    11111111100       


Q ss_pred             ----------------CCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          478 ----------------GNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       478 ----------------~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                                      ..........+...+++++.+++.+|+   ..||++|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML---ELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHS---CSCTTTSCCHHHHHTS
T ss_pred             HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHc---CCCcccCCCHHHHhcC
Confidence                            000011112233456778777777776   6699999999999875


No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=323.52  Aligned_cols=254  Identities=24%  Similarity=0.329  Sum_probs=187.6

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc--chHHHHHHHHHhcccCCCCceeeeeccc------------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD--GYVDTFVREVRSLSHVQHPNLVALLSYC------------  321 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~------------  321 (548)
                      .++|++.+.||+|+||.||+|... +++.||+|++...  ...+.+.+|+.+++.++||||+++++++            
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            478999999999999999999975 5899999988543  3456789999999999999999999876            


Q ss_pred             --ccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc-CCCCEEEE
Q 040363          322 --EDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN-ADFQAKLS  398 (548)
Q Consensus       322 --~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~-~~~~~kL~  398 (548)
                        .+.+..++||||++ |+|.+++.  .+.+++..++.++.|++.||.|||+.+   |+||||||+||+++ .++.+||+
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~  163 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE--QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIG  163 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEEC
T ss_pred             cccccCceeEEeeccC-CCHHHHhh--cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEc
Confidence              34467899999997 59999984  356899999999999999999999887   99999999999997 56789999


Q ss_pred             eccCcccccCCCC--cccccccCCCCccCcccccC-CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHH
Q 040363          399 DFGLSKVMDIGQS--YVSSEVRGTFGYVDPEYRRN-HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVM  475 (548)
Q Consensus       399 DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~  475 (548)
                      |||+++.......  .......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.....    .........
T Consensus       164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~~  239 (320)
T 2i6l_A          164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE----LEQMQLILE  239 (320)
T ss_dssp             CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHH
T ss_pred             cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHH
Confidence            9999987653221  12234567999999998765 6889999999999999999999999964431    111111111


Q ss_pred             hcCC------------c----------ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          476 RGGN------------I----------AKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       476 ~~~~------------~----------~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ....            +          .......+...++.+..+++.+|+   ..||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQIL---TFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTS---CSSGGGSCCHHHHHTS
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHc---CCCccccCCHHHHhCC
Confidence            1000            0          000000112345666655555544   4589999999999874


No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=8e-38  Score=320.10  Aligned_cols=196  Identities=27%  Similarity=0.368  Sum_probs=171.6

Q ss_pred             cCCccceeeeeecCceEEEEEEE--cCCcEEEEEEecCc-chHHHHHHHHHhcccCCCC------ceeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL--SNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHP------NLVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~--~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hp------nIv~l~~~~~~~~~~  327 (548)
                      .++|++.+.||+|+||.||++..  .+++.||+|++... ...+.+.+|+.+++.++|+      +++++++++...+..
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            46899999999999999999986  36889999998654 3456788999999988655      499999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC---------------
Q 040363          328 FLVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA---------------  391 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~---------------  391 (548)
                      ++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.               
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccc
Confidence            9999999 889999986543 36889999999999999999999887   999999999999987               


Q ss_pred             ----CCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          392 ----DFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       392 ----~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                          ++.+||+|||+++.....    .....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  237 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH  237 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence                668999999999875422    23457899999999999999999999999999999999999999644


No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=5.9e-38  Score=319.42  Aligned_cols=249  Identities=23%  Similarity=0.324  Sum_probs=191.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc----chHHHHHHHHHhcccCC--CCceeeeecccccCCceEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD----GYVDTFVREVRSLSHVQ--HPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~----~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~~lV  330 (548)
                      .++|++.+.||+|+||.||++...+++.||+|++...    ...+.+.+|+.+++.++  ||||+++++++.+++..++|
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  106 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  106 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence            4679999999999999999999888999999998432    34567899999999997  59999999999999999999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      || +.+++|.+++.. ...+++..++.++.|+++||.|||+.+   |+||||||+|||++. +.+||+|||+++......
T Consensus       107 ~e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~  180 (313)
T 3cek_A          107 ME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT  180 (313)
T ss_dssp             EC-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred             Ee-cCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence            99 567899999954 457899999999999999999999887   999999999999965 799999999998765432


Q ss_pred             Cc-ccccccCCCCccCcccccC-----------CCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC
Q 040363          411 SY-VSSEVRGTFGYVDPEYRRN-----------HHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG  478 (548)
Q Consensus       411 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~  478 (548)
                      .. ......||+.|+|||.+.+           ..++.++||||||+++|||++|+.||.....   ...... ......
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~~~-~~~~~~  256 (313)
T 3cek_A          181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLH-AIIDPN  256 (313)
T ss_dssp             ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHHHH-HHHCTT
T ss_pred             ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH---HHHHHH-HHHhcc
Confidence            22 2234579999999998865           4788999999999999999999999964321   122221 112111


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                           ....++...+.++.+++.+|+   ..||++|||+.|++++
T Consensus       257 -----~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          257 -----HEIEFPDIPEKDLQDVLKCCL---KRDPKQRISIPELLAH  293 (313)
T ss_dssp             -----SCCCCCCCSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             -----cccCCcccchHHHHHHHHHHc---cCCcccCcCHHHHhcC
Confidence                 112233344566555555444   4489999999999975


No 234
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=2.2e-38  Score=322.34  Aligned_cols=250  Identities=22%  Similarity=0.315  Sum_probs=179.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCcch----HHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISDGY----VDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||+|... +|+.||+|++.....    .+.+..+..+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            468999999999999999999974 789999999854322    223444555778889999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      ||+ ++.+..+.......+++..+..++.|++.||.|||+. +   |+||||||+||+++.++.+||+|||++.......
T Consensus       104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK  179 (318)
T ss_dssp             CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence            999 5566666655567899999999999999999999984 7   9999999999999999999999999997664322


Q ss_pred             CcccccccCCCCccCccccc-----CCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          411 SYVSSEVRGTFGYVDPEYRR-----NHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       411 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                        ......||+.|+|||++.     ...++.++||||||+++|||++|+.||.....   ....+. ....... ..   
T Consensus       180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~-~~~~~~~-~~---  249 (318)
T 2dyl_A          180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT---DFEVLT-KVLQEEP-PL---  249 (318)
T ss_dssp             ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHHHH-HHHHSCC-CC---
T ss_pred             --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc---cHHHHH-HHhccCC-CC---
Confidence              223456899999999984     56789999999999999999999999964321   122222 2222211 11   


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ......++++..+++.+|+   ..||.+|||+.|++++
T Consensus       250 ~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          250 LPGHMGFSGDFQSFVKDCL---TKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             CCSSSCCCHHHHHHHHHHT---CSCTTTSCCHHHHTTS
T ss_pred             CCccCCCCHHHHHHHHHHc---cCChhHCcCHHHHhhC
Confidence            1112346777666665554   4589999999999874


No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=9.7e-38  Score=322.07  Aligned_cols=251  Identities=25%  Similarity=0.310  Sum_probs=171.5

Q ss_pred             cCCcccee-eeeecCceEEEEEEEc-CCcEEEEEEecCcchHHHHHHHH-HhcccCCCCceeeeeccccc----CCceEE
Q 040363          257 TNNLSASN-YIGQGVAGKVYKGILS-NGQQVAVKHIISDGYVDTFVREV-RSLSHVQHPNLVALLSYCED----HNESFL  329 (548)
Q Consensus       257 ~~~y~~~~-~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~----~~~~~l  329 (548)
                      .++|.+.+ +||+|+||.||+|... +++.||+|++.....   ..+|+ ..++.++||||+++++++..    ....++
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  103 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI  103 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence            47899965 6999999999999965 699999999865422   22333 33556689999999999865    455899


Q ss_pred             EEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC---CCEEEEeccCccc
Q 040363          330 VYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD---FQAKLSDFGLSKV  405 (548)
Q Consensus       330 V~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~---~~~kL~DFGla~~  405 (548)
                      ||||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.+   +.+||+|||+++.
T Consensus       104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            999999999999996543 46999999999999999999999877   9999999999999864   4599999999986


Q ss_pred             ccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          406 MDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       406 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                      ....   ......||+.|+|||++.+..++.++||||||+++|+|++|+.||........... ..+.+.. .  .....
T Consensus       181 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~-~--~~~~~  253 (336)
T 3fhr_A          181 TTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKRRIRL-G--QYGFP  253 (336)
T ss_dssp             C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCC
T ss_pred             cccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHHhhhc-c--ccccC
Confidence            5422   22345789999999999999999999999999999999999999965443221111 1111110 0  01111


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ......+++++.+++.+|+   ..||++|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~li~~~L---~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          254 NPEWSEVSEDAKQLIRLLL---KTDPTERLTITQFMNH  288 (336)
T ss_dssp             TTTSTTCCHHHHHHHHHHS---CSSGGGSCCHHHHHHS
T ss_pred             chhhccCCHHHHHHHHHHC---CCChhHCcCHHHHhcC
Confidence            2223456777777666665   5589999999999984


No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2.6e-37  Score=324.31  Aligned_cols=199  Identities=28%  Similarity=0.307  Sum_probs=170.1

Q ss_pred             hcCCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-chHHHHHHHHHhcccCC-CC-----ceeeeecccccCCce
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-GYVDTFVREVRSLSHVQ-HP-----NLVALLSYCEDHNES  327 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~-hp-----nIv~l~~~~~~~~~~  327 (548)
                      ..++|++.+.||+|+||.||+|... +++.||||++... ...+.+.+|+.+++.++ |+     +|+++++++...+..
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            4579999999999999999999964 6889999999654 33567788888888774 44     599999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc--CCCCEEEEeccCcc
Q 040363          328 FLVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN--ADFQAKLSDFGLSK  404 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~--~~~~~kL~DFGla~  404 (548)
                      ++||||++ ++|.+++.... ..+++..+..++.|++.||.|||++ +.+|+||||||+|||++  .++.+||+|||+++
T Consensus       132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~  209 (382)
T 2vx3_A          132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC  209 (382)
T ss_dssp             EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence            99999996 49999986543 5689999999999999999999952 13399999999999994  47789999999998


Q ss_pred             cccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          405 VMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       405 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                      .....    .....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            76432    23467899999999999999999999999999999999999999644


No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=4.8e-38  Score=322.07  Aligned_cols=251  Identities=23%  Similarity=0.282  Sum_probs=174.9

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHH-hcccCCCCceeeeecccccCCceEEEE
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVR-SLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .++|++.+.||+|+||.||+|.. .+++.||+|++...   ....++.+|+. +++.++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            47899999999999999999997 47899999998543   23345566665 777889999999999999999999999


Q ss_pred             EecCCCChhHHhhh----ccCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          332 ELCHNGNLSEWLYG----KAGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       332 E~~~~gsL~~~l~~----~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      ||+++ +|.+++..    ....+++..+..++.|++.||.|||+. +   |+||||||+||+++.++.+||+|||+++..
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 88877742    246789999999999999999999986 7   999999999999999999999999999876


Q ss_pred             cCCCCcccccccCCCCccCcccc----cCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhc-CCcc
Q 040363          407 DIGQSYVSSEVRGTFGYVDPEYR----RNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRG-GNIA  481 (548)
Q Consensus       407 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~-~~~~  481 (548)
                      ....  ......||+.|+|||.+    .+..++.++||||||+++|+|++|+.||........       ..... ....
T Consensus       177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~  247 (327)
T 3aln_A          177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------QLTQVVKGDP  247 (327)
T ss_dssp             -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred             cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-------HHHHHhcCCC
Confidence            5332  22334689999999998    566789999999999999999999999964332110       00000 0000


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          482 KFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       482 ~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      ..........++++..+++.+|+   ..||++|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~l~~li~~~l---~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          248 PQLSNSEEREFSPSFINFVNLCL---TKDESKRPKYKELLKH  286 (327)
T ss_dssp             CCCCCCSSCCCCHHHHHHHHHHT---CSSGGGSCCHHHHTTS
T ss_pred             CCCCCcccccCCHHHHHHHHHHh---hCChhhCcCHHHHHhC
Confidence            11111222346776666555554   4589999999999874


No 238
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=7.6e-38  Score=324.42  Aligned_cols=201  Identities=26%  Similarity=0.368  Sum_probs=157.6

Q ss_pred             HhhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-chHHHHHHHHHhcccCCCCceeeeecccccCCc-----
Q 040363          254 YSATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNE-----  326 (548)
Q Consensus       254 ~~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-----  326 (548)
                      ....++|++.+.||+|+||.||+|.. .+++.||||++..+ .......+|+..+..++||||+++++++...+.     
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            34568999999999999999999996 46899999988543 334466778888888999999999999855333     


Q ss_pred             --eEEEEEecCCCChhHHhh---hccCcchHHHHHHHHHHHHHHHHHhh--hCCCCceEecccCCCCeeEcC-CCCEEEE
Q 040363          327 --SFLVYELCHNGNLSEWLY---GKAGVLSWIQRLKIAIDSATGLWFLH--TYPEGCIIHRDIKPTNILINA-DFQAKLS  398 (548)
Q Consensus       327 --~~lV~E~~~~gsL~~~l~---~~~~~l~~~~~~~i~~qia~aL~yLH--~~~~~~IvH~DlKp~NILl~~-~~~~kL~  398 (548)
                        .++||||+++ +|.+.+.   .....+++..+..++.|++.||.|||  +.+   |+||||||+|||++. ++.+||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~  174 (360)
T 3e3p_A           99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLC  174 (360)
T ss_dssp             EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEEC
T ss_pred             eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEe
Confidence              7899999986 5554442   24567889999999999999999999  777   999999999999997 8999999


Q ss_pred             eccCcccccCCCCcccccccCCCCccCcccccCC-CCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          399 DFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNH-HVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       399 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                      |||+++......  ......||+.|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus       175 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  235 (360)
T 3e3p_A          175 DFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD  235 (360)
T ss_dssp             CCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence            999998765333  23345789999999988654 5899999999999999999999999654


No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.5e-38  Score=319.95  Aligned_cols=241  Identities=25%  Similarity=0.346  Sum_probs=188.2

Q ss_pred             hhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc--------hHHHHHHHHHhcccC----CCCceeeeeccc
Q 040363          255 SATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG--------YVDTFVREVRSLSHV----QHPNLVALLSYC  321 (548)
Q Consensus       255 ~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~--------~~~~~~~E~~il~~l----~hpnIv~l~~~~  321 (548)
                      ...++|++.+.||+|+||.||+|.. .+++.||+|++....        ....+.+|+.++..+    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3457899999999999999999985 578999999985432        122456788888888    899999999999


Q ss_pred             ccCCceEEEEEe-cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc-CCCCEEEEe
Q 040363          322 EDHNESFLVYEL-CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN-ADFQAKLSD  399 (548)
Q Consensus       322 ~~~~~~~lV~E~-~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~-~~~~~kL~D  399 (548)
                      ...+..++|+|+ +.+++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+||+++ .++.+||+|
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~d  183 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLID  183 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEE
Confidence            999999999999 789999999954 456899999999999999999999887   99999999999999 789999999


Q ss_pred             ccCcccccCCCCcccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcC
Q 040363          400 FGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGG  478 (548)
Q Consensus       400 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~  478 (548)
                      ||++.......   .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...       ...   ...  
T Consensus       184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~---~~~--  248 (312)
T 2iwi_A          184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QEI---LEA--  248 (312)
T ss_dssp             CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHH---HHT--
T ss_pred             cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HHH---hhh--
Confidence            99998765332   234569999999999877666 45899999999999999999998521       111   111  


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          479 NIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       479 ~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                            ...++..++.+..+++.+|+   ..+|++|||+.|++++
T Consensus       249 ------~~~~~~~~~~~~~~li~~~l---~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          249 ------ELHFPAHVSPDCCALIRRCL---APKPSSRPSLEEILLD  284 (312)
T ss_dssp             ------CCCCCTTSCHHHHHHHHHHT---CSSTTTSCCHHHHHHS
T ss_pred             ------ccCCcccCCHHHHHHHHHHc---cCChhhCcCHHHHhcC
Confidence                  12234456777666555554   4589999999999874


No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=6e-38  Score=326.50  Aligned_cols=258  Identities=20%  Similarity=0.264  Sum_probs=196.5

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc-hHHHHHHHHHhcccCC-----------CCceeeeecccccC
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG-YVDTFVREVRSLSHVQ-----------HPNLVALLSYCEDH  324 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~-~~~~~~~E~~il~~l~-----------hpnIv~l~~~~~~~  324 (548)
                      ++|++.+.||+|+||.||+|.. .+++.||+|++..+. ..+.+.+|+.+++.++           ||||+++++++...
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            6899999999999999999996 578999999996543 4567889999998886           89999999998765


Q ss_pred             C----ceEEEEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhC-CCCceEecccCCCCeeEc------CC
Q 040363          325 N----ESFLVYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTY-PEGCIIHRDIKPTNILIN------AD  392 (548)
Q Consensus       325 ~----~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~IvH~DlKp~NILl~------~~  392 (548)
                      +    ..+++||++ +++|.+++... ...+++..+..++.|++.||.|||+. +   |+||||||+|||++      ..
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A           99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTE
T ss_pred             CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCc
Confidence            4    689999999 88999998653 34689999999999999999999986 7   99999999999994      44


Q ss_pred             CCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCC--cHHHH
Q 040363          393 FQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPM--PLDKM  470 (548)
Q Consensus       393 ~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~--~~~~~  470 (548)
                      +.+||+|||++......    .....||+.|+|||++.+..++.++||||||+++|||++|+.||........  ....+
T Consensus       175 ~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  250 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  250 (373)
T ss_dssp             EEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             ceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence            47999999999876532    2335789999999999999999999999999999999999999975442211  11122


Q ss_pred             HHHHHhcCCccc---------------------ccCCCC---------CCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHH
Q 040363          471 AKFVMRGGNIAK---------------------FADPTI---------NGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQ  519 (548)
Q Consensus       471 ~~~~~~~~~~~~---------------------~~d~~l---------~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~e  519 (548)
                      .......+..+.                     ......         ...++....+.+..++..|+. ||++|||+.|
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence            221111111100                     000000         112345566677778888877 8999999999


Q ss_pred             HHHH
Q 040363          520 VVLR  523 (548)
Q Consensus       520 vl~~  523 (548)
                      ++++
T Consensus       331 ll~h  334 (373)
T 1q8y_A          331 LVNH  334 (373)
T ss_dssp             HHTC
T ss_pred             HhhC
Confidence            9984


No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.3e-37  Score=332.53  Aligned_cols=249  Identities=26%  Similarity=0.381  Sum_probs=182.0

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEEEecCC
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVYELCHN  336 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~  336 (548)
                      +.|...+.||+|+||+||.+...+|+.||||++..+ ..+.+.+|+.+++.+ +||||+++++++.+++..++||||+. 
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            456667889999999998777778999999998654 345678999999876 89999999999999999999999996 


Q ss_pred             CChhHHhhhccCc------chHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCC-------------CCEEE
Q 040363          337 GNLSEWLYGKAGV------LSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINAD-------------FQAKL  397 (548)
Q Consensus       337 gsL~~~l~~~~~~------l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~-------------~~~kL  397 (548)
                      |+|.+++......      .++..++.++.|++.||.|||+.+   |+||||||+|||++.+             +.+||
T Consensus        93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL  169 (434)
T 2rio_A           93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILI  169 (434)
T ss_dssp             EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred             CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence            5999999544321      123345789999999999999887   9999999999999754             47999


Q ss_pred             EeccCcccccCCCCc---ccccccCCCCccCcccccC-------CCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCc
Q 040363          398 SDFGLSKVMDIGQSY---VSSEVRGTFGYVDPEYRRN-------HHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMP  466 (548)
Q Consensus       398 ~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~  466 (548)
                      +|||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||......   
T Consensus       170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---  246 (434)
T 2rio_A          170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---  246 (434)
T ss_dssp             CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---
T ss_pred             cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---
Confidence            999999887644322   1234579999999999865       678999999999999999999 99998533211   


Q ss_pred             HHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHH
Q 040363          467 LDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVL  522 (548)
Q Consensus       467 ~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~  522 (548)
                       .  ...........     ......+....+.+..++.+|+. ||++|||+.|+++
T Consensus       247 -~--~~i~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          247 -E--SNIIRGIFSLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             -H--HHHHHTCCCCC-----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -H--HHHhcCCCCcc-----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence             1  11111111111     11111123334445556666665 8999999999986


No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=3.6e-38  Score=322.80  Aligned_cols=242  Identities=26%  Similarity=0.363  Sum_probs=196.7

Q ss_pred             HhhcCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCcc--------hHHHHHHHHHhcccCC--CCceeeeecccc
Q 040363          254 YSATNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISDG--------YVDTFVREVRSLSHVQ--HPNLVALLSYCE  322 (548)
Q Consensus       254 ~~~~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~--------~~~~~~~E~~il~~l~--hpnIv~l~~~~~  322 (548)
                      ....++|++.+.||+|+||.||+|.. .+++.||+|.+....        ..+.+.+|+.+++.++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34557899999999999999999995 578999999985432        2245678999999995  599999999999


Q ss_pred             cCCceEEEEEecCC-CChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEc-CCCCEEEEec
Q 040363          323 DHNESFLVYELCHN-GNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILIN-ADFQAKLSDF  400 (548)
Q Consensus       323 ~~~~~~lV~E~~~~-gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~-~~~~~kL~DF  400 (548)
                      ..+..++|+|++.+ ++|.+++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++ .++.+||+||
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Df  194 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF  194 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence            99999999999976 899999854 467899999999999999999999877   99999999999999 7789999999


Q ss_pred             cCcccccCCCCcccccccCCCCccCcccccCCCC-CccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCC
Q 040363          401 GLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHV-STSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGN  479 (548)
Q Consensus       401 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~  479 (548)
                      |+++.....   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||...       ..    ....  
T Consensus       195 g~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~----~~~~--  258 (320)
T 3a99_A          195 GSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EE----IIRG--  258 (320)
T ss_dssp             TTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HHHC--
T ss_pred             ccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hh----hhcc--
Confidence            999876532   2234579999999999877665 78899999999999999999998532       11    1111  


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          480 IAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       480 ~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                           ...+...++++..+++.+|+   ..||++|||++|++++
T Consensus       259 -----~~~~~~~~~~~~~~li~~~l---~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          259 -----QVFFRQRVSSECQHLIRWCL---ALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             -----CCCCSSCCCHHHHHHHHHHT---CSSGGGSCCHHHHHTS
T ss_pred             -----cccccccCCHHHHHHHHHHc---cCChhhCcCHHHHhcC
Confidence                 11233456777666555554   4589999999999874


No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=3.2e-37  Score=317.99  Aligned_cols=196  Identities=23%  Similarity=0.337  Sum_probs=168.9

Q ss_pred             cCCccceeeeeecCceEEEEEEEc-CC-cEEEEEEecCc-chHHHHHHHHHhcccCCCCc------eeeeecccccCCce
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS-NG-QQVAVKHIISD-GYVDTFVREVRSLSHVQHPN------LVALLSYCEDHNES  327 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~-~g-~~vAvK~i~~~-~~~~~~~~E~~il~~l~hpn------Iv~l~~~~~~~~~~  327 (548)
                      .++|++.+.||+|+||.||+|... ++ +.||+|++... ...+.+.+|+.+++.++|++      ++.+++++...+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            378999999999999999999964 34 78999998654 34567888999999997655      89999999999999


Q ss_pred             EEEEEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE-----------------
Q 040363          328 FLVYELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI-----------------  389 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl-----------------  389 (548)
                      ++||||+ +++|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||||+|||+                 
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccc
Confidence            9999999 567777664443 57999999999999999999999777   9999999999999                 


Q ss_pred             --cCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCC
Q 040363          390 --NADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLG  460 (548)
Q Consensus       390 --~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~  460 (548)
                        +.++.+||+|||+++.....    .....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH  242 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence              56789999999999865422    23457999999999999999999999999999999999999999643


No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.4e-37  Score=330.37  Aligned_cols=247  Identities=26%  Similarity=0.435  Sum_probs=182.6

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEEEecCC
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVYELCHN  336 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~  336 (548)
                      .+|...++||+|+||+||.....+++.||||++..+.. +.+.+|+.+++.+ +||||+++++++.+.+..++||||+. 
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-  101 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-  101 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence            56999999999999997765566899999999865422 2467899999999 79999999999999999999999996 


Q ss_pred             CChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC-----CCCEEEEeccCcccccCCCC
Q 040363          337 GNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA-----DFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       337 gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~-----~~~~kL~DFGla~~~~~~~~  411 (548)
                      |+|.+++...........++.++.|++.||.|||+.+   |+||||||+|||++.     ...+||+|||+++.......
T Consensus       102 g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          102 ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            5999999766555666677899999999999999887   999999999999953     23588999999987654322


Q ss_pred             --cccccccCCCCccCccccc---CCCCCccccHHHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHHHhcCCcccccC
Q 040363          412 --YVSSEVRGTFGYVDPEYRR---NHHVSTSGDVYSFGVVLLQLLS-GQRVINLGDNRPMPLDKMAKFVMRGGNIAKFAD  485 (548)
Q Consensus       412 --~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~eLlt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d  485 (548)
                        .......||+.|+|||++.   ...++.++|||||||++|||++ |..||.....     .. .......... ....
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-----~~-~~~~~~~~~~-~~~~  251 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-----RQ-ANILLGACSL-DCLH  251 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-----HH-HHHHTTCCCC-TTSC
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-----HH-HHHHhccCCc-cccC
Confidence              2234567999999999987   4567889999999999999999 8998853221     11 1111111111 1111


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHHHHH
Q 040363          486 PTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQVVL  522 (548)
Q Consensus       486 ~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~evl~  522 (548)
                      +      .......+..++.+|+. ||++|||+.|+++
T Consensus       252 ~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          252 P------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             T------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             c------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1      11222334455555555 8999999999995


No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1e-36  Score=338.64  Aligned_cols=269  Identities=23%  Similarity=0.325  Sum_probs=199.3

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeeccccc------CCce
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCED------HNES  327 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~  327 (548)
                      ++|++.+.||+|+||.||+|.. .+|+.||||++...   ...+.+.+|+++++.++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6899999999999999999996 56899999988543   345678999999999999999999998765      6778


Q ss_pred             EEEEEecCCCChhHHhhhcc--CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCC---EEEEeccC
Q 040363          328 FLVYELCHNGNLSEWLYGKA--GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQ---AKLSDFGL  402 (548)
Q Consensus       328 ~lV~E~~~~gsL~~~l~~~~--~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~---~kL~DFGl  402 (548)
                      ++||||+++++|.+++....  ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999996533  26889999999999999999999877   999999999999997765   99999999


Q ss_pred             cccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCC----CcHHHHHHHHH---
Q 040363          403 SKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRP----MPLDKMAKFVM---  475 (548)
Q Consensus       403 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~----~~~~~~~~~~~---  475 (548)
                      +.......  ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.......    ...........   
T Consensus       171 a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          171 AKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD  248 (676)
T ss_dssp             CCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred             cccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence            98765332  2345679999999999999999999999999999999999999996432100    00000000000   


Q ss_pred             -hcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhC-CCCCCCCHHH-----HHHHHHHhhhhh
Q 040363          476 -RGGNIAKFADPTINGEYSVEAFDLVFKLALSCTG-IKQQRPSMEQ-----VVLRLEKALDIS  531 (548)
Q Consensus       476 -~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~-dP~~RPT~~e-----vl~~L~~~l~~~  531 (548)
                       ..+..........+...+....+.+..++..|+. ||++|||+.|     +.+.++++++..
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k  311 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK  311 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence             0000100011111222344444555666666665 8999999988     677888877544


No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.2e-35  Score=334.68  Aligned_cols=238  Identities=21%  Similarity=0.292  Sum_probs=188.4

Q ss_pred             cCCccceeeeeecCceEEEEEEEc--CCcEEEEEEecCc---chHHHHHHHHHhcccCCCCceeeeecccccCCc-----
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILS--NGQQVAVKHIISD---GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNE-----  326 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~--~g~~vAvK~i~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-----  326 (548)
                      .++|++.+.||+|+||.||++.+.  +++.||||++...   ...+.+.+|+.+++.++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            378999999999999999999975  6899999988543   334578899999999999999999999987665     


Q ss_pred             eEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          327 SFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       327 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      .++||||+++++|.+++..   .+++.+++.++.|++.||.|||+.+   |+||||||+|||++.+ .+||+|||+++..
T Consensus       159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~  231 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRI  231 (681)
T ss_dssp             EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred             eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhc
Confidence            6999999999999988743   6899999999999999999999887   9999999999999986 9999999999876


Q ss_pred             cCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          407 DIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       407 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      ...     ....||+.|+|||++.+. ++.++||||||+++|+|++|..||........+                  ..
T Consensus       232 ~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------~~  287 (681)
T 2pzi_A          232 NSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------ED  287 (681)
T ss_dssp             TCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------TT
T ss_pred             ccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc------------------cc
Confidence            532     345799999999988765 489999999999999999999887532211110                  00


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhC-CCCCCC-CHHHHHHHHHHhhh
Q 040363          487 TINGEYSVEAFDLVFKLALSCTG-IKQQRP-SMEQVVLRLEKALD  529 (548)
Q Consensus       487 ~l~~~~s~~~~~ll~~ll~~C~~-dP~~RP-T~~evl~~L~~~l~  529 (548)
                      ......++    .+..++.+|+. ||++|| +++++.+.|..++.
T Consensus       288 ~~~~~~~~----~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          288 DPVLKTYD----SYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             CHHHHHCH----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             ccccccCH----HHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence            00001123    34555556665 899999 57777777777653


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=4.1e-35  Score=295.99  Aligned_cols=231  Identities=13%  Similarity=0.126  Sum_probs=179.5

Q ss_pred             CCccceeeeeecCceEEEEEEEc-CCcEEEEEEecCc-----chHHHHHHHHHhcccCCCCceeeeecccccCCceEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD-----GYVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ++|++.+.||+|+||.||+|... +++.||+|++...     ...+.+.+|+.++..++||||+++++++.+++..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            68999999999999999999974 5899999999543     22367899999999999999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||+++++|.+++..  + ....++..++.|++.||.|||+.+   |+||||||+|||++.++.+||+++|          
T Consensus       111 e~~~g~~L~~~l~~--~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~----------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADT--S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA----------  174 (286)
T ss_dssp             ECCCEEEHHHHHTT--C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred             EecCCCCHHHHHhc--C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence            99999999999943  2 344568889999999999999887   9999999999999999999997443          


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGE  491 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  491 (548)
                                 |++       .++.++||||||+++|||++|+.||............ .    +...........+...
T Consensus       175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~  231 (286)
T 3uqc_A          175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-E----RDTAGQPIEPADIDRD  231 (286)
T ss_dssp             -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-C----BCTTSCBCCHHHHCTT
T ss_pred             -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-H----HHhccCCCChhhcccC
Confidence                       333       3689999999999999999999999755432210000 0    0000000000122345


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHhhhhh
Q 040363          492 YSVEAFDLVFKLALSCTGIKQQRPSMEQVVLRLEKALDIS  531 (548)
Q Consensus       492 ~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~L~~~l~~~  531 (548)
                      ++++..+++.+++   ..||++| |+.|+++.|+++....
T Consensus       232 ~~~~l~~li~~~l---~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          232 IPFQISAVAARSV---QGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             SCHHHHHHHHHHH---CTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             CCHHHHHHHHHHc---ccCCccC-CHHHHHHHHHHHhccC
Confidence            6667666555555   5589999 9999999999987544


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.5e-35  Score=314.69  Aligned_cols=239  Identities=15%  Similarity=0.111  Sum_probs=177.2

Q ss_pred             cCCccceeeeeecCceEEEEEEE-cCCcEEEEEEecCc-----chHHHHHHHHHhcccCCC-Cceeeee-----------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGIL-SNGQQVAVKHIISD-----GYVDTFVREVRSLSHVQH-PNLVALL-----------  318 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~-----~~~~~~~~E~~il~~l~h-pnIv~l~-----------  318 (548)
                      ..+|...++||+|+||.||+|.+ .+|+.||||++...     ...+.+.+|+.+++.++| +|...+.           
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            35688899999999999999995 57999999998622     225678999999999976 3221111           


Q ss_pred             ----------ccccc-----CCceEEEEEecCCCChhHHhh------hccCcchHHHHHHHHHHHHHHHHHhhhCCCCce
Q 040363          319 ----------SYCED-----HNESFLVYELCHNGNLSEWLY------GKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCI  377 (548)
Q Consensus       319 ----------~~~~~-----~~~~~lV~E~~~~gsL~~~l~------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~I  377 (548)
                                .++..     ....+++|+++ +++|.+++.      .....+++..++.++.|++.||.|||+.+   |
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence                      11111     12346677765 679999883      22456889999999999999999999887   9


Q ss_pred             EecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccc----------cCCCCCccccHHHHHHHH
Q 040363          378 IHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYR----------RNHHVSTSGDVYSFGVVL  447 (548)
Q Consensus       378 vH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ksDIwSlGvil  447 (548)
                      +||||||+|||++.++.+||+|||+++..+..    .....| +.|+|||++          ....++.++|||||||++
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            99999999999999999999999998865422    344567 999999998          666789999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          448 LQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADPTINGEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       448 ~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      |||++|+.||........              ......  ....++++..+++.+|+   ..||++|||+.|++++
T Consensus       308 ~elltg~~Pf~~~~~~~~--------------~~~~~~--~~~~~~~~~~~li~~~l---~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGG--------------SEWIFR--SCKNIPQPVRALLEGFL---RYPKEDRLLPLQAMET  364 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSC--------------SGGGGS--SCCCCCHHHHHHHHHHT---CSSGGGSCCHHHHTTS
T ss_pred             HHHHHCCCCCCCcchhhh--------------HHHHHh--hcccCCHHHHHHHHHHc---cCChhhCcCHHHHHhC
Confidence            999999999964432111              011111  11245666666555554   4589999998877543


No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=7e-35  Score=295.17  Aligned_cols=226  Identities=22%  Similarity=0.313  Sum_probs=176.1

Q ss_pred             CCccce-eeeeecCceEEEEEEE-cCCcEEEEEEecCcchHHHHHHHHHhc-ccCCCCceeeeeccccc----CCceEEE
Q 040363          258 NNLSAS-NYIGQGVAGKVYKGIL-SNGQQVAVKHIISDGYVDTFVREVRSL-SHVQHPNLVALLSYCED----HNESFLV  330 (548)
Q Consensus       258 ~~y~~~-~~LG~G~fg~Vy~a~~-~~g~~vAvK~i~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~----~~~~~lV  330 (548)
                      ++|.+. +.||+|+||.||++.. .+++.||+|++...   ..+.+|+.++ +.++||||+++++++..    ....++|
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   93 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   93 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence            578887 7899999999999996 57899999998643   3567888887 55589999999999876    6778999


Q ss_pred             EEecCCCChhHHhhhcc-CcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcC---CCCEEEEeccCcccc
Q 040363          331 YELCHNGNLSEWLYGKA-GVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINA---DFQAKLSDFGLSKVM  406 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~---~~~~kL~DFGla~~~  406 (548)
                      |||+++++|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.   ++.+||+|||++...
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            99999999999996543 36999999999999999999999887   999999999999998   788999999998653


Q ss_pred             cCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHHHhcCCcccccCC
Q 040363          407 DIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVINLGDNRPMPLDKMAKFVMRGGNIAKFADP  486 (548)
Q Consensus       407 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  486 (548)
                      .                       +..++.++||||||+++|||++|+.||........     .   ............
T Consensus       171 ~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----~---~~~~~~~~~~~~  219 (299)
T 3m2w_A          171 T-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----S---PGMKTRIRMGQY  219 (299)
T ss_dssp             T-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------CCSCCSSCTTCC
T ss_pred             c-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----h---HHHHHHHhhccc
Confidence            2                       24578899999999999999999999964332110     0   000000000111


Q ss_pred             CCC----CCCCHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Q 040363          487 TIN----GEYSVEAFDLVFKLALSCTGIKQQRPSMEQVVLR  523 (548)
Q Consensus       487 ~l~----~~~s~~~~~ll~~ll~~C~~dP~~RPT~~evl~~  523 (548)
                      .++    ..++++..+++.+|+   ..||++|||+.|++++
T Consensus       220 ~~~~~~~~~~~~~~~~li~~~l---~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          220 EFPNPEWSEVSEEVKMLIRNLL---KTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SSCHHHHTTSCHHHHHHHHHHT---CSSTTTSCCHHHHHTS
T ss_pred             cCCchhcccCCHHHHHHHHHHc---ccChhhCCCHHHHhcC
Confidence            111    346777666666655   5589999999999985


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=1.6e-36  Score=312.26  Aligned_cols=188  Identities=21%  Similarity=0.214  Sum_probs=159.5

Q ss_pred             cCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcc----------hHHHHHHHHHhcccCC----------------
Q 040363          257 TNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG----------YVDTFVREVRSLSHVQ----------------  310 (548)
Q Consensus       257 ~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~----------~~~~~~~E~~il~~l~----------------  310 (548)
                      .++|++.+.||+|+||.||+|+. +|+.||||++....          ..+.+.+|+.+++.++                
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            36799999999999999999998 78999999985332          2367889999988886                


Q ss_pred             ----------CCceeeeeccccc-------------CCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHH
Q 040363          311 ----------HPNLVALLSYCED-------------HNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLW  367 (548)
Q Consensus       311 ----------hpnIv~l~~~~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~  367 (548)
                                ||||+++++++.+             .+..++||||+++|++.+.+..  ..+++..++.++.|++.||.
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence                      5666666666654             6789999999999977766633  56899999999999999999


Q ss_pred             Hhh-hCCCCceEecccCCCCeeEcCCC--------------------CEEEEeccCcccccCCCCcccccccCCCCccCc
Q 040363          368 FLH-TYPEGCIIHRDIKPTNILINADF--------------------QAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDP  426 (548)
Q Consensus       368 yLH-~~~~~~IvH~DlKp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aP  426 (548)
                      ||| +.+   |+||||||+|||++.++                    .+||+|||+++.....      ...||+.|+||
T Consensus       176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP  246 (336)
T 2vuw_A          176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE  246 (336)
T ss_dssp             HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred             HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence            999 888   99999999999999887                    8999999999876532      34799999999


Q ss_pred             ccccCCCCCccccHHHHHHH-HHHHHcCCCCC
Q 040363          427 EYRRNHHVSTSGDVYSFGVV-LLQLLSGQRVI  457 (548)
Q Consensus       427 E~~~~~~~~~ksDIwSlGvi-l~eLltG~~pf  457 (548)
                      |++.+.. +.++|||||+++ .+++++|..||
T Consensus       247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~  277 (336)
T 2vuw_A          247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPY  277 (336)
T ss_dssp             GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTH
T ss_pred             hhhcCCC-ccceehhhhhCCCCcccccccCCC
Confidence            9998766 899999998777 77888898887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95  E-value=6.3e-30  Score=281.92  Aligned_cols=183  Identities=20%  Similarity=0.108  Sum_probs=130.2

Q ss_pred             eeecCceEEEEEE-EcCCcEEEEEEecCc------------chHHHHHHHHHhcccC-CCCceeeeecccccCCceEEEE
Q 040363          266 IGQGVAGKVYKGI-LSNGQQVAVKHIISD------------GYVDTFVREVRSLSHV-QHPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       266 LG~G~fg~Vy~a~-~~~g~~vAvK~i~~~------------~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      .+.|+.|.+..++ .-.|+.+++|.+..+            ...+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            4566666666655 346899999998432            2345799999999999 7999999999999999999999


Q ss_pred             EecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCC
Q 040363          332 ELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQS  411 (548)
Q Consensus       332 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~  411 (548)
                      ||++|++|.++|.. .+.++..   .|+.||+.||+|+|+++   ||||||||+|||++.+|.+||+|||+|+...... 
T Consensus       322 Eyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-  393 (569)
T 4azs_A          322 EKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-  393 (569)
T ss_dssp             ECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred             ecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence            99999999999954 4556553   48899999999999888   9999999999999999999999999998765332 


Q ss_pred             cccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCC
Q 040363          412 YVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       412 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      ......+||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus       394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~  438 (569)
T 4azs_A          394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW  438 (569)
T ss_dssp             CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred             ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence            23345679999999999876 4677899999999988887765443


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92  E-value=1.6e-26  Score=253.36  Aligned_cols=182  Identities=18%  Similarity=0.214  Sum_probs=144.8

Q ss_pred             cceeeeeecCceEEEEEEEcCCcEEEEEEecCcc----------hHHHHHHHHHhcccCCCCceeeeecccccCCceEEE
Q 040363          261 SASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG----------YVDTFVREVRSLSHVQHPNLVALLSYCEDHNESFLV  330 (548)
Q Consensus       261 ~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~----------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV  330 (548)
                      ...++||+|+||.||++.. .++.+++|+.....          ..+++.+|++++++++||||+++..++...+..++|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            3457899999999999954 67889999863321          134589999999999999999655555567778999


Q ss_pred             EEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCC
Q 040363          331 YELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQ  410 (548)
Q Consensus       331 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~  410 (548)
                      |||+++++|.+++..         +..++.|+++||.|||+.+   |+||||||+|||++.  .+||+|||+++......
T Consensus       418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~  483 (540)
T 3en9_A          418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE  483 (540)
T ss_dssp             EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred             EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence            999999999999954         5689999999999999877   999999999999999  99999999999875432


Q ss_pred             Ccc------cccccCCCCccCcccccC--CCCCccccHHHHHHHHHHHHcCCCCC
Q 040363          411 SYV------SSEVRGTFGYVDPEYRRN--HHVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       411 ~~~------~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      ...      .....||+.|+|||++..  ..|+...|+|+..+-.++-+.++.+|
T Consensus       484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            211      235679999999999987  67888999999999999888877765


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88  E-value=5.6e-23  Score=206.88  Aligned_cols=164  Identities=15%  Similarity=0.092  Sum_probs=129.2

Q ss_pred             HHHHHhhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcc--------------------hHHHHHHHHHhcccC
Q 040363          250 IKEVYSATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG--------------------YVDTFVREVRSLSHV  309 (548)
Q Consensus       250 ~~e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~--------------------~~~~~~~E~~il~~l  309 (548)
                      ...+......|.+.+.||+|+||.||+|...+|+.||+|.+....                    ....+.+|+.+++.+
T Consensus        82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            344555667788889999999999999999779999999985321                    245688999999999


Q ss_pred             CCCceeeeecccccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE
Q 040363          310 QHPNLVALLSYCEDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       310 ~hpnIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl  389 (548)
                      +  | +++.+++. .+..++||||+++++|.+ +..       .....++.|++.||.|||+.+   |+||||||+|||+
T Consensus       162 ~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl  226 (282)
T 1zar_A          162 Q--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLV  226 (282)
T ss_dssp             T--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred             c--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEE
Confidence            8  4 66666543 356799999999999998 421       123469999999999999887   9999999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccC----------CCCCccccHHHH
Q 040363          390 NADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRN----------HHVSTSGDVYSF  443 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~ksDIwSl  443 (548)
                      + ++.+||+|||+++.              +..++|||++..          ..+....|+|.+
T Consensus       227 ~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~  275 (282)
T 1zar_A          227 S-EEGIWIIDFPQSVE--------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA  275 (282)
T ss_dssp             E-TTEEEECCCTTCEE--------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred             E-CCcEEEEECCCCeE--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence            9 99999999999864              345788997643          345556666653


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78  E-value=4.2e-19  Score=176.05  Aligned_cols=136  Identities=18%  Similarity=0.170  Sum_probs=107.0

Q ss_pred             CCccceeeeeecCceEEEEEEE-cCCcE--EEEEEecCcc--------------------------hHHHHHHHHHhccc
Q 040363          258 NNLSASNYIGQGVAGKVYKGIL-SNGQQ--VAVKHIISDG--------------------------YVDTFVREVRSLSH  308 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~-~~g~~--vAvK~i~~~~--------------------------~~~~~~~E~~il~~  308 (548)
                      .-|.+.+.||+|+||.||+|.. .+|+.  ||||++....                          ....+.+|+.++..
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3467889999999999999997 78999  9999864321                          01367899999999


Q ss_pred             CCCCce--eeeecccccCCceEEEEEecCC-C----ChhHHhhhccCcchHHHHHHHHHHHHHHHHHhh-hCCCCceEec
Q 040363          309 VQHPNL--VALLSYCEDHNESFLVYELCHN-G----NLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLH-TYPEGCIIHR  380 (548)
Q Consensus       309 l~hpnI--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~IvH~  380 (548)
                      +.|+++  +.+++.    +..++||||+.+ |    +|.++..    ..++..+..++.|++.+|.||| +.+   |+||
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr  195 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR----ELKELDVEGIFNDVVENVKRLYQEAE---LVHA  195 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG----GGGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh----ccChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence            987753  334432    466899999942 4    6665542    1235567889999999999999 888   9999


Q ss_pred             ccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          381 DIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       381 DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      ||||+|||++.  .++|+|||++...
T Consensus       196 Dlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          196 DLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCHHHEEEcC--cEEEEECcccccC
Confidence            99999999998  9999999999764


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63  E-value=2.3e-16  Score=164.29  Aligned_cols=140  Identities=14%  Similarity=0.101  Sum_probs=99.3

Q ss_pred             HHHhhcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcc----------------hHHH--------HHHHHHhcc
Q 040363          252 EVYSATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG----------------YVDT--------FVREVRSLS  307 (548)
Q Consensus       252 e~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~----------------~~~~--------~~~E~~il~  307 (548)
                      .+.....-|.+.+.||+|++|.||+|...+|+.||||++....                ....        ..+|...|.
T Consensus        89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~  168 (397)
T 4gyi_A           89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK  168 (397)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence            3444444599999999999999999999899999999863210                0111        234555555


Q ss_pred             cCCCCcee--eeecccccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCC
Q 040363          308 HVQHPNLV--ALLSYCEDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPT  385 (548)
Q Consensus       308 ~l~hpnIv--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~  385 (548)
                      ++.+.++.  ..++    ....+|||||++|++|.++...       .....++.|++.+|.+||+.+   ||||||||.
T Consensus       169 rL~~~gv~vp~p~~----~~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~  234 (397)
T 4gyi_A          169 ALYEEGFPVPEPIA----QSRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKHG---LIHGDFNEF  234 (397)
T ss_dssp             HHHHTTCSCCCEEE----EETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTT
T ss_pred             HHHhcCCCCCeeee----ccCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHH
Confidence            55333221  1111    1234699999999888765421       123567899999999999877   999999999


Q ss_pred             CeeEcCCC----------CEEEEeccCccc
Q 040363          386 NILINADF----------QAKLSDFGLSKV  405 (548)
Q Consensus       386 NILl~~~~----------~~kL~DFGla~~  405 (548)
                      |||++.++          .+.|+||+-+..
T Consensus       235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          235 NILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HEEEeCCCCcccccccccceEEEEeCCccc
Confidence            99998876          389999997654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25  E-value=1.1e-11  Score=122.16  Aligned_cols=143  Identities=18%  Similarity=0.101  Sum_probs=112.0

Q ss_pred             hcCCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc--chHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEEE
Q 040363          256 ATNNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD--GYVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       256 ~~~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ....|++...++.|+.+.||++.. +++.+++|.....  .....+.+|+++++.+. +..+++++++..+.+..++|||
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            346798889999999999999985 4689999988542  22346889999999884 6778889998888888999999


Q ss_pred             ecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCC---------------------------------------
Q 040363          333 LCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP---------------------------------------  373 (548)
Q Consensus       333 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------  373 (548)
                      +++|.+|.+.+.      +......++.+++++|..||+..                                       
T Consensus        91 ~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (263)
T 3tm0_A           91 EADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF  164 (263)
T ss_dssp             CCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred             ecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence            999999887641      11223467788999999999821                                       


Q ss_pred             -----------------CCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          374 -----------------EGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       374 -----------------~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                                       ...++|+|++|.||+++.+..+.|+||+.+..
T Consensus       165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                             13499999999999998765567999997654


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13  E-value=5.2e-11  Score=116.24  Aligned_cols=138  Identities=17%  Similarity=0.122  Sum_probs=100.9

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCc--eeeeecccccCCceEEEEEecC
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPN--LVALLSYCEDHNESFLVYELCH  335 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~lV~E~~~  335 (548)
                      .++.+....+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+.+.+  +++++++...++..++||||++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            345554444456669999998777888999987554 3346788999999885434  5568888877778899999999


Q ss_pred             CCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCC------------------------------------------
Q 040363          336 NGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP------------------------------------------  373 (548)
Q Consensus       336 ~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~------------------------------------------  373 (548)
                      |.+|.  .. .   .+   ...++.++++.|..||+..                                          
T Consensus        99 G~~l~--~~-~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
T 1nd4_A           99 GQDLL--SS-H---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE  169 (264)
T ss_dssp             SEETT--TS-C---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred             CcccC--cC-c---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence            98884  21 1   11   1255677777788888643                                          


Q ss_pred             -------------CCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          374 -------------EGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       374 -------------~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                                   ...++|+|++|.||+++.++.+.|+||+.+..
T Consensus       170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                         12399999999999998776667999998754


No 258
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.99  E-value=2.4e-10  Score=115.25  Aligned_cols=183  Identities=17%  Similarity=0.159  Sum_probs=122.5

Q ss_pred             eeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccC-CCCc--eeeeecccccCC---ceEEEEEecCC
Q 040363          263 SNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHV-QHPN--LVALLSYCEDHN---ESFLVYELCHN  336 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l-~hpn--Iv~l~~~~~~~~---~~~lV~E~~~~  336 (548)
                      .+.++.|....||+..    +.+++|..........+.+|.++++.+ .+..  +.+.+......+   ..|+||++++|
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence            4568999999999863    568999876554567889999999887 3322  344554443333   34889999999


Q ss_pred             CChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCC-------------------------------------------
Q 040363          337 GNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP-------------------------------------------  373 (548)
Q Consensus       337 gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-------------------------------------------  373 (548)
                      .+|.+...   ..++..++..++.++++.+..||+..                                           
T Consensus       101 ~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  177 (304)
T 3sg8_A          101 VPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFY  177 (304)
T ss_dssp             EECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred             eECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence            88875332   23566677778888888888888621                                           


Q ss_pred             ------------CCceEecccCCCCeeEcC--CCCEEEEeccCcccccCCCCcccccccCCCCc---cCcccccC-----
Q 040363          374 ------------EGCIIHRDIKPTNILINA--DFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGY---VDPEYRRN-----  431 (548)
Q Consensus       374 ------------~~~IvH~DlKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y---~aPE~~~~-----  431 (548)
                                  ...++|+|++|.||+++.  ...+.|+||+.+...+.... .    .....+   ..|+....     
T Consensus       178 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D-l----~~~~~~~~~~~~~~~~~~l~~Y  252 (304)
T 3sg8_A          178 RDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND-F----ISLMEDDEEYGMEFVSKILNHY  252 (304)
T ss_dssp             HHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH-H----HTTCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH-H----HHHHhhccccCHHHHHHHHHHc
Confidence                        134899999999999998  45678999998876432110 0    001111   22221110     


Q ss_pred             C---------CCCccccHHHHHHHHHHHHcCCCCC
Q 040363          432 H---------HVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       432 ~---------~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      +         ......+.|+++.++|.+.+|..+|
T Consensus       253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            0         1122368999999999999998765


No 259
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98  E-value=1.2e-09  Score=112.82  Aligned_cols=144  Identities=17%  Similarity=0.217  Sum_probs=108.1

Q ss_pred             CccceeeeeecCceEEEEEEEcCCcEEEEEEec--Ccc---hHHHHHHHHHhcccCC--CCceeeeecccccC---CceE
Q 040363          259 NLSASNYIGQGVAGKVYKGILSNGQQVAVKHII--SDG---YVDTFVREVRSLSHVQ--HPNLVALLSYCEDH---NESF  328 (548)
Q Consensus       259 ~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~--~~~---~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~---~~~~  328 (548)
                      .....+.|+.|.++.||+.... +..+++|+..  ...   ....+.+|+.+++.+.  +..+++++.++.+.   +..+
T Consensus        39 ~~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~  117 (359)
T 3dxp_A           39 GPLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF  117 (359)
T ss_dssp             CCCEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred             CCceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence            3445678999999999998874 4678888765  322   2346788999999986  45678888887666   4579


Q ss_pred             EEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCC-----------------------------------
Q 040363          329 LVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP-----------------------------------  373 (548)
Q Consensus       329 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-----------------------------------  373 (548)
                      +||||++|..+.+..   ...++..++..++.++++.|+.||+..                                   
T Consensus       118 ~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             EEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            999999998775422   124677788889999999999999731                                   


Q ss_pred             --------------------CCceEecccCCCCeeEcCCCC--EEEEeccCcccc
Q 040363          374 --------------------EGCIIHRDIKPTNILINADFQ--AKLSDFGLSKVM  406 (548)
Q Consensus       374 --------------------~~~IvH~DlKp~NILl~~~~~--~kL~DFGla~~~  406 (548)
                                          ...++|+|++|.|||++.++.  +.|+||+.+...
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                246999999999999998754  689999988753


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.71  E-value=5.6e-08  Score=98.69  Aligned_cols=139  Identities=21%  Similarity=0.249  Sum_probs=103.2

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCC----CceeeeecccccCCceEEEEEe
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQH----PNLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~h----pnIv~l~~~~~~~~~~~lV~E~  333 (548)
                      -.+...+.++.|....||+.    ++.+++|..........+.+|.++++.+.+    ..+.++++.    +..++||||
T Consensus        37 ~~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~  108 (320)
T 3r70_A           37 IKINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY  108 (320)
T ss_dssp             SCCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred             cceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence            36677788999999999997    678999987665556678999998888865    224455544    467899999


Q ss_pred             cCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCC---------------------------------------
Q 040363          334 CHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPE---------------------------------------  374 (548)
Q Consensus       334 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~---------------------------------------  374 (548)
                      ++|.++.....   ..++..++..++.++++.|..||+...                                       
T Consensus       109 i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (320)
T 3r70_A          109 IKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM  185 (320)
T ss_dssp             CCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred             cCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence            99988864321   234556666777777777777775432                                       


Q ss_pred             ---------------------CceEecccCCCCeeEcCCCCEEEEeccCccccc
Q 040363          375 ---------------------GCIIHRDIKPTNILINADFQAKLSDFGLSKVMD  407 (548)
Q Consensus       375 ---------------------~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~  407 (548)
                                           ..++|+|++|.||+++.+..+.|+||+.+...+
T Consensus       186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~  239 (320)
T 3r70_A          186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD  239 (320)
T ss_dssp             HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred             hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence                                 236999999999999986667999999986643


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.46  E-value=9.7e-07  Score=89.01  Aligned_cols=138  Identities=19%  Similarity=0.218  Sum_probs=94.4

Q ss_pred             ceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCC---ceeeeecccc-cCCceEEEEEecCCC
Q 040363          262 ASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHP---NLVALLSYCE-DHNESFLVYELCHNG  337 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hp---nIv~l~~~~~-~~~~~~lV~E~~~~g  337 (548)
                      ..+.++.|....||+.    ++.+++|..........+.+|.++|+.+.+.   .+.+.+.+.. ..+..++|||+++|.
T Consensus        23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           23 SVESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             CEEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eeeecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            3467888988899987    5778888865444566889999999998642   3455555553 445678999999998


Q ss_pred             ChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCC--------------------------------------------
Q 040363          338 NLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP--------------------------------------------  373 (548)
Q Consensus       338 sL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--------------------------------------------  373 (548)
                      .+.+...   ..++..+...++.++.+.|..||+..                                            
T Consensus        99 ~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~  175 (306)
T 3tdw_A           99 ILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR  175 (306)
T ss_dssp             ECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred             ECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence            8865321   12233344444444444444444322                                            


Q ss_pred             -------------CCceEecccCCCCeeEcC---CCCE-EEEeccCcccc
Q 040363          374 -------------EGCIIHRDIKPTNILINA---DFQA-KLSDFGLSKVM  406 (548)
Q Consensus       374 -------------~~~IvH~DlKp~NILl~~---~~~~-kL~DFGla~~~  406 (548)
                                   ...++|+|++|.||+++.   ++.+ .|+||+.+...
T Consensus       176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                         234799999999999987   4564 89999987653


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34  E-value=1.7e-06  Score=86.57  Aligned_cols=77  Identities=17%  Similarity=0.201  Sum_probs=60.8

Q ss_pred             CccceeeeeecCceEEEEEEEcCCcEEEEEEecCc--chHHHHHHHHHhcccCCCC---ceeeeecccccCCceEEEEEe
Q 040363          259 NLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD--GYVDTFVREVRSLSHVQHP---NLVALLSYCEDHNESFLVYEL  333 (548)
Q Consensus       259 ~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~hp---nIv~l~~~~~~~~~~~lV~E~  333 (548)
                      .....+.|+.|.++.||++...+|+.+++|+....  .....+.+|++.|+.+++.   .+++++.+.    ..++||||
T Consensus        16 ~~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~   91 (288)
T 3d1u_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred             CccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence            34556889999999999999888999999986432  2235789999999999754   567777653    46899999


Q ss_pred             cCCCCh
Q 040363          334 CHNGNL  339 (548)
Q Consensus       334 ~~~gsL  339 (548)
                      ++++.+
T Consensus        92 l~g~~~   97 (288)
T 3d1u_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             cccCCC
Confidence            999875


No 263
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.28  E-value=2.2e-06  Score=84.07  Aligned_cols=135  Identities=16%  Similarity=0.164  Sum_probs=95.2

Q ss_pred             eeeecCce-EEEEEEEc-CCcEEEEEEecCcchHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEEEecCCCChhH
Q 040363          265 YIGQGVAG-KVYKGILS-NGQQVAVKHIISDGYVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVYELCHNGNLSE  341 (548)
Q Consensus       265 ~LG~G~fg-~Vy~a~~~-~g~~vAvK~i~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~gsL~~  341 (548)
                      .+..|..+ .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.+++.++.+.+..++|||+++|.++.+
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~  109 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ  109 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH-HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC-CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence            34445554 68987754 5678999876433 3457888999998884 3346778888888888999999999988776


Q ss_pred             HhhhccCcchHHHHHHHHHHHHHHHHHhhhCC------------------------------------------------
Q 040363          342 WLYGKAGVLSWIQRLKIAIDSATGLWFLHTYP------------------------------------------------  373 (548)
Q Consensus       342 ~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~------------------------------------------------  373 (548)
                      .....     ......+..++++.|..||...                                                
T Consensus       110 ~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  184 (272)
T 4gkh_A          110 VLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMH  184 (272)
T ss_dssp             HHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHH
T ss_pred             cccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHH
Confidence            54211     1122345556666666666532                                                


Q ss_pred             -------CCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          374 -------EGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       374 -------~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                             ...++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       185 ~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          185 KLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             TTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             hcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                   11289999999999999876677999997764


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.26  E-value=1.4e-06  Score=89.44  Aligned_cols=79  Identities=5%  Similarity=-0.026  Sum_probs=55.8

Q ss_pred             ceeee-eecCceEEEEEEEc-------CCcEEEEEEecCcc-----hHHHHHHHHHhcccCC-C--CceeeeecccccC-
Q 040363          262 ASNYI-GQGVAGKVYKGILS-------NGQQVAVKHIISDG-----YVDTFVREVRSLSHVQ-H--PNLVALLSYCEDH-  324 (548)
Q Consensus       262 ~~~~L-G~G~fg~Vy~a~~~-------~g~~vAvK~i~~~~-----~~~~~~~E~~il~~l~-h--pnIv~l~~~~~~~-  324 (548)
                      ..+.| +.|....+|+....       +++.+++|......     ....+.+|+.+++.+. +  -.+.+++.+..+. 
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            34677 78888999988764       26788998764432     1246788999888884 3  3566777776554 


Q ss_pred             --CceEEEEEecCCCChh
Q 040363          325 --NESFLVYELCHNGNLS  340 (548)
Q Consensus       325 --~~~~lV~E~~~~gsL~  340 (548)
                        ...++|||+++|..+.
T Consensus       104 ~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTSSCEEEEECCCCBCCC
T ss_pred             ccCCceEEEEecCCCChh
Confidence              3568999999987654


No 265
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.24  E-value=4e-06  Score=86.65  Aligned_cols=79  Identities=10%  Similarity=0.153  Sum_probs=57.9

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCC--ceeeeecccccC-CceEEEEEec
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHP--NLVALLSYCEDH-NESFLVYELC  334 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~~-~~~~lV~E~~  334 (548)
                      ......+.++.|....+|+... +++.+++|......   .+.+|..+++.+...  .+.+++.+.... +..++|||++
T Consensus        41 ~~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~---~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l  116 (362)
T 3ovc_A           41 DSVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD---GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA  116 (362)
T ss_dssp             SCCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCCH---HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred             CCCceEEECCCCCcceEEEEEE-CCcEEEEEeCCchh---hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence            3455678899999999999876 67899999775432   578888888888532  245666655543 5689999999


Q ss_pred             CCCChh
Q 040363          335 HNGNLS  340 (548)
Q Consensus       335 ~~gsL~  340 (548)
                      +|..+.
T Consensus       117 ~G~~l~  122 (362)
T 3ovc_A          117 QGVTLQ  122 (362)
T ss_dssp             CSEETT
T ss_pred             CCCCcc
Confidence            986553


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.95  E-value=2.9e-05  Score=78.42  Aligned_cols=140  Identities=16%  Similarity=0.090  Sum_probs=79.4

Q ss_pred             eeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCC--CCceeeeecc------cccCCceEEEEEec
Q 040363          263 SNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQ--HPNLVALLSY------CEDHNESFLVYELC  334 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~------~~~~~~~~lV~E~~  334 (548)
                      .+.|+.|..+.||+....+| .+++|+....  .+++..|..+++.|.  .-.+++++..      ....+..+++|+|+
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             EEECC----CEEEEEEETTE-EEEEEEECSC--HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred             eeeccccccCcEEEEEeCCC-CEEEEecCCC--HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence            45566677889999987554 5899988653  234455666666553  1123344331      12355678999999


Q ss_pred             CCCChh-----------HHh---hhccC----c---------chHHH-------------------------------HH
Q 040363          335 HNGNLS-----------EWL---YGKAG----V---------LSWIQ-------------------------------RL  356 (548)
Q Consensus       335 ~~gsL~-----------~~l---~~~~~----~---------l~~~~-------------------------------~~  356 (548)
                      +|..+.           ..+   +....    +         ..|..                               ..
T Consensus       114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  193 (346)
T 2q83_A          114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID  193 (346)
T ss_dssp             CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred             cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence            986542           011   11000    0         01111                               00


Q ss_pred             HHHHHHHHHHHHhhh----------CCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          357 KIAIDSATGLWFLHT----------YPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       357 ~i~~qia~aL~yLH~----------~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      .+...+..++.+|+.          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            111223345566652          0234599999999999998888999999997643


No 267
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}
Probab=97.92  E-value=3.9e-06  Score=71.18  Aligned_cols=86  Identities=13%  Similarity=0.142  Sum_probs=67.2

Q ss_pred             hhHHHHHHHHHHHhhhhccceeecchhhhhhhhccccccccchhhhhhhhhccccCCC-chhHhhHhhhhhHHHHHHHhh
Q 040363           65 GAVFDDYLRALGRQANLTGKIFLNSTEQSNCLASMKEFDKDVLGCRIEKLTSGAGGCS-DYTVEGIVNKLSDRLKILAEG  143 (548)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~c~-~~~~~~~~~~l~~~~~~~~~~  143 (548)
                      ...+..++.+|..+|..+|..|-....               -..+.++||+ ++||+ |++..+|..||..++..++++
T Consensus        22 ~~nl~~ll~~L~~~a~~s~~~~~t~~~---------------~~~~~~~vyg-l~qC~~Dls~~~C~~Cl~~a~~~~~~~   85 (108)
T 3a2e_A           22 NRNLRAMLADLRQNTAFSGYDYKTSRA---------------GSGGAPTAYG-RATCKQSISQSDCTACLSNLVNRIFSI   85 (108)
T ss_dssp             HHHHHHHHHHHHHHGGGTTSEEEEEEC---------------CSTTCCCEEE-EEEECTTSCHHHHHHHHHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHhhCccccCCceEeec---------------cCCCCceEEE-EEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence            456678888888888877766533211               1234578999 99999 999999999999999999999


Q ss_pred             ccCCCCCCcCcccchHhhhccccCCC
Q 040363          144 CKNLSSDGRFDQACTACLRGWEDIGG  169 (548)
Q Consensus       144 ~~~~~~~~~~~~~~~~C~~~~~~~~~  169 (548)
                      |.+ ..|  +..--++|.+|++++++
T Consensus        86 C~~-~~g--~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           86 CNN-AIG--ARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             TTS-BSS--EEEEETTEEEEEESSCC
T ss_pred             CCC-Cce--EEEECCCEEEEEeCCcC
Confidence            976 555  56777899999997553


No 268
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88  E-value=3e-05  Score=80.73  Aligned_cols=74  Identities=16%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             ceeeeeecCceEEEEEEEc-CCcEEEEEEecCc---------chHHHHHHHHHhcccCCC--C-ceeeeecccccCCceE
Q 040363          262 ASNYIGQGVAGKVYKGILS-NGQQVAVKHIISD---------GYVDTFVREVRSLSHVQH--P-NLVALLSYCEDHNESF  328 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~i~~~---------~~~~~~~~E~~il~~l~h--p-nIv~l~~~~~~~~~~~  328 (548)
                      ..+.||.|..+.||++... +++.+++|.....         ...+++..|.++++.+..  | .+++++.+  +.+..+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            3568999999999999753 5688999976321         123456789888887732  3 34455543  344568


Q ss_pred             EEEEecCCC
Q 040363          329 LVYELCHNG  337 (548)
Q Consensus       329 lV~E~~~~g  337 (548)
                      +|||++++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999764


No 269
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.73  E-value=0.00013  Score=73.68  Aligned_cols=78  Identities=18%  Similarity=0.161  Sum_probs=61.3

Q ss_pred             ccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCC---CCceeeeecccccCCceEEEEEecCC
Q 040363          260 LSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQ---HPNLVALLSYCEDHNESFLVYELCHN  336 (548)
Q Consensus       260 y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~lV~E~~~~  336 (548)
                      ....+.|+.|....+|+... +++.+++|..... ....+.+|.+.|+.|.   ...+++.+.+....+..++|||++++
T Consensus        38 i~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLIND-EVQTVFVKINERS-YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eeeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            44567899999999999886 5678889876543 3567889999998883   35677888887777889999999998


Q ss_pred             CCh
Q 040363          337 GNL  339 (548)
Q Consensus       337 gsL  339 (548)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765


No 270
>2e79_A Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lectin, plant protein, sugar binding protein; 2.38A {Ginkgo biloba} PDB: 3a2e_A
Probab=97.60  E-value=2.8e-05  Score=65.85  Aligned_cols=84  Identities=13%  Similarity=0.173  Sum_probs=62.2

Q ss_pred             hHHHHHHHHHHHhhhhccceeecchhhhhhhhccccccccchhhhhhhhhccccCCC-chhHhhHhhhhhHHHHHHHhhc
Q 040363           66 AVFDDYLRALGRQANLTGKIFLNSTEQSNCLASMKEFDKDVLGCRIEKLTSGAGGCS-DYTVEGIVNKLSDRLKILAEGC  144 (548)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~c~-~~~~~~~~~~l~~~~~~~~~~~  144 (548)
                      ..+..++.+|..+|..++..|-..+        .+.       .+.++||+ ++||+ |++..+|..||..++..+.++|
T Consensus        23 ~nl~~ll~~L~~~a~~~~~~f~~~~--------~g~-------~~~~~vYg-l~qC~~Dls~~~C~~Cl~~a~~~~~~~C   86 (108)
T 2e79_A           23 RNLRAMLADLRQNTAFSGYDYKTSR--------AGS-------GGAPTAYG-RATCKQSISQSDCTACLSNLVNRIFSIC   86 (108)
T ss_dssp             HHHHHHHHHHHHHGGGTTSEEEEEE--------CCC-------TTCCCEEE-EEEECTTSCHHHHHHHHHHHHTTHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCCcccEEEe--------cCC-------CCCCcEEE-EEecCCCCChHHHHHHHHHHHHHHHHhC
Confidence            4456777777777765554443221        110       22468999 99999 9999999999999999999999


Q ss_pred             cCCCCCCcCcccchHhhhccccCC
Q 040363          145 KNLSSDGRFDQACTACLRGWEDIG  168 (548)
Q Consensus       145 ~~~~~~~~~~~~~~~C~~~~~~~~  168 (548)
                      .+ ..|  +..--++|.+|+++.+
T Consensus        87 ~~-~~g--~~i~~~~C~lRy~~~~  107 (108)
T 2e79_A           87 NN-AIG--ARVQLVDCFIQYEQRS  107 (108)
T ss_dssp             TS-BSS--EEEEESSEEEEEESSC
T ss_pred             CC-Cce--EEEECCCeEEEEeCCC
Confidence            77 555  4566789999999754


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.49  E-value=0.00026  Score=74.32  Aligned_cols=79  Identities=10%  Similarity=0.120  Sum_probs=48.5

Q ss_pred             CCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCcccccc-cCCCCccCcccccCC---CCCccccHHHHHHHHHH
Q 040363          374 EGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSSEV-RGTFGYVDPEYRRNH---HVSTSGDVYSFGVVLLQ  449 (548)
Q Consensus       374 ~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~~~ksDIwSlGvil~e  449 (548)
                      ...++|+|++|.|||++.++ ++|+||+.+...+..... .... .-...|.+|+.....   ......++..+...+|+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN  308 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence            45599999999999999876 999999988764311110 0000 001345566544321   11234566678888888


Q ss_pred             HHcCC
Q 040363          450 LLSGQ  454 (548)
Q Consensus       450 LltG~  454 (548)
                      .+.++
T Consensus       309 ~y~~~  313 (420)
T 2pyw_A          309 LFNKR  313 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764


No 272
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.47  E-value=0.00057  Score=67.64  Aligned_cols=78  Identities=17%  Similarity=0.219  Sum_probs=56.7

Q ss_pred             CCccceeeeeecCceEEEEEEEcCCcEEEEEEecCc--chHHHHHHHHHhcccCC-C--CceeeeecccccCCceEEEEE
Q 040363          258 NNLSASNYIGQGVAGKVYKGILSNGQQVAVKHIISD--GYVDTFVREVRSLSHVQ-H--PNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       258 ~~y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~--~~~~~~~~E~~il~~l~-h--pnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ......+.+|.|..+.||+.+..+|+.|++|+....  .....+.+|.+.|+.|. .  --+++.+.+    +..++|||
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e   90 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAME   90 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEE
Confidence            456677889999999999999999999999986433  22345788999888873 2  124444443    23478999


Q ss_pred             ecCCCCh
Q 040363          333 LCHNGNL  339 (548)
Q Consensus       333 ~~~~gsL  339 (548)
                      +++++..
T Consensus        91 ~l~~~~~   97 (288)
T 3f7w_A           91 WVDERPP   97 (288)
T ss_dssp             CCCCCCC
T ss_pred             eecccCC
Confidence            9987654


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.39  E-value=0.00043  Score=69.48  Aligned_cols=142  Identities=13%  Similarity=0.052  Sum_probs=78.5

Q ss_pred             eeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCc--eeeeeccc------ccCCceEEEEEec
Q 040363          263 SNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPN--LVALLSYC------EDHNESFLVYELC  334 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~------~~~~~~~lV~E~~  334 (548)
                      .+.|+.|....+|+....+| .+++|........+.+..|+.+++.+...+  +.+++...      ...+..+++++++
T Consensus        27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l  105 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL  105 (322)
T ss_dssp             EEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred             eeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence            45677788889999987555 688888765323345667888877773212  33333221      1234568999999


Q ss_pred             CCCChhH-----------H---hhhc------c-----CcchHHHHHH------------HHHHHHHHHHHhhhC----C
Q 040363          335 HNGNLSE-----------W---LYGK------A-----GVLSWIQRLK------------IAIDSATGLWFLHTY----P  373 (548)
Q Consensus       335 ~~gsL~~-----------~---l~~~------~-----~~l~~~~~~~------------i~~qia~aL~yLH~~----~  373 (548)
                      +|..+..           .   ++..      .     ....|.....            +...+.+.+..++..    .
T Consensus       106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~  185 (322)
T 2ppq_A          106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL  185 (322)
T ss_dssp             CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred             CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence            8865321           0   1110      0     0011221110            001123334444421    1


Q ss_pred             CCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          374 EGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       374 ~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      ...++|+|+.+.|||++.+..+.|+||+.+..
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            34599999999999999875567999997653


No 274
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.24  E-value=0.00073  Score=68.24  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=28.2

Q ss_pred             CCceEecccCCCCeeEcCC----CCEEEEeccCcccc
Q 040363          374 EGCIIHRDIKPTNILINAD----FQAKLSDFGLSKVM  406 (548)
Q Consensus       374 ~~~IvH~DlKp~NILl~~~----~~~kL~DFGla~~~  406 (548)
                      ...++|+|+.+.|||++.+    +.+.|+||+.+..-
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            3469999999999999875    67999999988764


No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.22  E-value=0.00071  Score=71.35  Aligned_cols=74  Identities=14%  Similarity=0.057  Sum_probs=51.3

Q ss_pred             ceeeeeecCceEEEEEEEcC--------CcEEEEEEecCcchHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEEE
Q 040363          262 ASNYIGQGVAGKVYKGILSN--------GQQVAVKHIISDGYVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~~--------g~~vAvK~i~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      ..+.|+.|....+|+....+        ++.+++|+.......+.+.+|..+++.+. +.-.+++++.+.+    .+|+|
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            35678888889999998753        57899998744222256678999998884 3223566666543    38999


Q ss_pred             ecCCCCh
Q 040363          333 LCHNGNL  339 (548)
Q Consensus       333 ~~~~gsL  339 (548)
                      |++|.+|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9986443


No 276
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.06  E-value=0.0012  Score=68.33  Aligned_cols=139  Identities=15%  Similarity=0.090  Sum_probs=82.0

Q ss_pred             eeeeeecCceEEEEEEEc--------CCcEEEEEEecCc-chHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEEE
Q 040363          263 SNYIGQGVAGKVYKGILS--------NGQQVAVKHIISD-GYVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVYE  332 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E  332 (548)
                      .+.|..|-...+|+....        +++.+++|+.-.. .......+|.++++.+. +.-..++++.+.+    .+|+|
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            356766888889998864        2478999876321 23456678999998883 3334566766654    28999


Q ss_pred             ecCCCChhHH--------------h---hhc----cCcc--hHHHHHHHHHHHHH-------------------HHHH--
Q 040363          333 LCHNGNLSEW--------------L---YGK----AGVL--SWIQRLKIAIDSAT-------------------GLWF--  368 (548)
Q Consensus       333 ~~~~gsL~~~--------------l---~~~----~~~l--~~~~~~~i~~qia~-------------------aL~y--  368 (548)
                      |++|..|..-              |   +..    ....  -+.+..++..++..                   .+..  
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998655311              0   110    0111  23444444433321                   1222  


Q ss_pred             --hhhC-CCCceEecccCCCCeeEcCC----CCEEEEeccCccc
Q 040363          369 --LHTY-PEGCIIHRDIKPTNILINAD----FQAKLSDFGLSKV  405 (548)
Q Consensus       369 --LH~~-~~~~IvH~DlKp~NILl~~~----~~~kL~DFGla~~  405 (548)
                        |... ....++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              2221 23459999999999999876    7899999998764


No 277
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.04  E-value=0.0013  Score=65.46  Aligned_cols=71  Identities=7%  Similarity=-0.041  Sum_probs=44.4

Q ss_pred             ceeeeeecCceEEEEEEEcCCcEEEEEEecCcc-hHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEEEec-CCCC
Q 040363          262 ASNYIGQGVAGKVYKGILSNGQQVAVKHIISDG-YVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVYELC-HNGN  338 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~-~~gs  338 (548)
                      -.+.|+.|....+|+.     +.+++|+..... ......+|+.+++.+. +.-..+++...  .+..++++||+ ++.+
T Consensus        22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT   94 (301)
T ss_dssp             SCEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred             ceeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence            3678999999999998     568888764321 1112356777777763 21114555443  33457899999 6654


Q ss_pred             h
Q 040363          339 L  339 (548)
Q Consensus       339 L  339 (548)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 278
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.01  E-value=0.0019  Score=64.86  Aligned_cols=140  Identities=14%  Similarity=0.125  Sum_probs=81.1

Q ss_pred             eeeeeecCceEEEEEEEcCCcEEEEEEecCc-chHHHHHHHHHhcccCCCC--ceeeeecc-----cccCCceEEEEEec
Q 040363          263 SNYIGQGVAGKVYKGILSNGQQVAVKHIISD-GYVDTFVREVRSLSHVQHP--NLVALLSY-----CEDHNESFLVYELC  334 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~-~~~~~~~~E~~il~~l~hp--nIv~l~~~-----~~~~~~~~lV~E~~  334 (548)
                      ...|+ |....||+....+|+.+++|..... ...+.+..|..+++.+...  .+++++..     ....+..+++++++
T Consensus        31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             CEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             EEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            35577 8888999988777878999988633 3345677788888877421  24444443     11234557899999


Q ss_pred             CCCChh-----H------Hh---hh--c------cCcchHHHH----------------------HHHHHHHHHHHHHhh
Q 040363          335 HNGNLS-----E------WL---YG--K------AGVLSWIQR----------------------LKIAIDSATGLWFLH  370 (548)
Q Consensus       335 ~~gsL~-----~------~l---~~--~------~~~l~~~~~----------------------~~i~~qia~aL~yLH  370 (548)
                      +|..+.     .      .+   +.  .      ....++...                      ...+..++..+..+.
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            875432     0      01   00  0      011111110                      011111122222111


Q ss_pred             h-CCCCceEecccCCCCeeEcCCCCEEEEeccCccc
Q 040363          371 T-YPEGCIIHRDIKPTNILINADFQAKLSDFGLSKV  405 (548)
Q Consensus       371 ~-~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~  405 (548)
                      . .....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            1 1234589999999999999 4 899999987754


No 279
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.93  E-value=0.0039  Score=59.05  Aligned_cols=101  Identities=15%  Similarity=0.052  Sum_probs=67.5

Q ss_pred             CChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcccccCCCCccccc
Q 040363          337 GNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSKVMDIGQSYVSSE  416 (548)
Q Consensus       337 gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  416 (548)
                      -+|.++|...+.++++.++|.++.|.+.+|.-+-....  -..+=+-|..|++..+|.+-+.+ ..+.            
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~--~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQ--PRHRVRSAAQIRVWRDGAVTLAP-AADD------------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC--CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhccc--CCceecCCcceEEecCCceeccc-cccc------------
Confidence            37999998888999999999999999999877622110  11222357899999999988764 1110            


Q ss_pred             ccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCC
Q 040363          417 VRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQ  454 (548)
Q Consensus       417 ~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~  454 (548)
                       .....+.|||... ...+.+.=|||||++||.-+--.
T Consensus        98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg  133 (229)
T 2yle_A           98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG  133 (229)
T ss_dssp             ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred             -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence             1133566888753 45578899999999999988533


No 280
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.60  E-value=0.0054  Score=65.10  Aligned_cols=74  Identities=11%  Similarity=0.016  Sum_probs=47.1

Q ss_pred             ceeeeeecCceEEEEEEEcC-CcEEEEEEecCcc-hHHHHHHHHHhcccCCCCc-eeeeecccccCCceEEEEEecCCCC
Q 040363          262 ASNYIGQGVAGKVYKGILSN-GQQVAVKHIISDG-YVDTFVREVRSLSHVQHPN-LVALLSYCEDHNESFLVYELCHNGN  338 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~~-g~~vAvK~i~~~~-~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lV~E~~~~gs  338 (548)
                      ..+.|+.|-...+|+....+ ++.+++|+..... ..-.-.+|..+++.|...+ .+++++.+..    .+|+||++|..
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~  187 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA  187 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence            34678888889999998755 5788898763321 1111257888888885333 3567776632    35999998754


Q ss_pred             h
Q 040363          339 L  339 (548)
Q Consensus       339 L  339 (548)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 281
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.58  E-value=0.0075  Score=61.24  Aligned_cols=32  Identities=19%  Similarity=0.303  Sum_probs=28.1

Q ss_pred             CceEecccCCCCeeEcCCCCEEEEeccCcccc
Q 040363          375 GCIIHRDIKPTNILINADFQAKLSDFGLSKVM  406 (548)
Q Consensus       375 ~~IvH~DlKp~NILl~~~~~~kL~DFGla~~~  406 (548)
                      ..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            45999999999999998888999999877653


No 282
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.50  E-value=0.0042  Score=63.65  Aligned_cols=73  Identities=12%  Similarity=0.048  Sum_probs=43.6

Q ss_pred             eeeeeecCceEEEEEEEcC---------CcEEEEEEecCcc-hHHHHHHHHHhcccCCCCc-eeeeecccccCCceEEEE
Q 040363          263 SNYIGQGVAGKVYKGILSN---------GQQVAVKHIISDG-YVDTFVREVRSLSHVQHPN-LVALLSYCEDHNESFLVY  331 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~~---------g~~vAvK~i~~~~-~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lV~  331 (548)
                      .+.|+.|....+|+....+         ++.+++|+..... ......+|..+++.+...+ ++++++...    -++||
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~  113 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE  113 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence            4567888888999998644         2688888764321 1112367888888774222 345655432    36899


Q ss_pred             EecCCCCh
Q 040363          332 ELCHNGNL  339 (548)
Q Consensus       332 E~~~~gsL  339 (548)
                      ||++|..+
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987543


No 283
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.04  E-value=0.018  Score=59.90  Aligned_cols=139  Identities=15%  Similarity=0.101  Sum_probs=81.5

Q ss_pred             eeeeeecCceEEEEEEEcC--------CcEEEEEEecCcch--------------------HHHHHHHHHhcccCC-CCc
Q 040363          263 SNYIGQGVAGKVYKGILSN--------GQQVAVKHIISDGY--------------------VDTFVREVRSLSHVQ-HPN  313 (548)
Q Consensus       263 ~~~LG~G~fg~Vy~a~~~~--------g~~vAvK~i~~~~~--------------------~~~~~~E~~il~~l~-hpn  313 (548)
                      .+.|..|-...+|+...++        ++.|.+++.-....                    .+.+..|..+++.+. +.-
T Consensus        57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi  136 (401)
T 3f2s_A           57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL  136 (401)
T ss_dssp             EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred             EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence            3556668888999988653        36788887632211                    012335888888883 444


Q ss_pred             eeeeecccccCCceEEEEEecCCCChhH--H------------h---hhc----cCcc--hHHHHHHHHHHHH-------
Q 040363          314 LVALLSYCEDHNESFLVYELCHNGNLSE--W------------L---YGK----AGVL--SWIQRLKIAIDSA-------  363 (548)
Q Consensus       314 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~--~------------l---~~~----~~~l--~~~~~~~i~~qia-------  363 (548)
                      ..++++++.++    +|+||++|-+|..  +            +   +..    ....  -+....++..++.       
T Consensus       137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~  212 (401)
T 3f2s_A          137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE  212 (401)
T ss_dssp             SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred             CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence            56777776533    8999998755421  1            0   000    0111  1223333332221       


Q ss_pred             ---------------HHH----HHhhhC-CCCceEecccCCCCeeEcCC------CCEEEEeccCccc
Q 040363          364 ---------------TGL----WFLHTY-PEGCIIHRDIKPTNILINAD------FQAKLSDFGLSKV  405 (548)
Q Consensus       364 ---------------~aL----~yLH~~-~~~~IvH~DlKp~NILl~~~------~~~kL~DFGla~~  405 (548)
                                     .-+    .+|... ....++|+|+.+.||+++.+      +.+.|+||..+..
T Consensus       213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence                           111    223222 23459999999999999886      7899999987754


No 284
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.48  E-value=0.09  Score=55.05  Aligned_cols=74  Identities=8%  Similarity=-0.012  Sum_probs=47.9

Q ss_pred             ceeeeeecCceEEEEEEEcC--------CcEEEEEEecCcc-hHHHHHHHHHhcccCC-CCceeeeecccccCCceEEEE
Q 040363          262 ASNYIGQGVAGKVYKGILSN--------GQQVAVKHIISDG-YVDTFVREVRSLSHVQ-HPNLVALLSYCEDHNESFLVY  331 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~~--------g~~vAvK~i~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~  331 (548)
                      ..+.|..|-...+|+....+        ++.+++|+..... ..-...+|..+++.+. +.-..++++.+.    -++|+
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~  149 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE  149 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence            34667778888999998753        5789998763321 1112357888888774 333445555432    37899


Q ss_pred             EecCCCCh
Q 040363          332 ELCHNGNL  339 (548)
Q Consensus       332 E~~~~gsL  339 (548)
                      ||++|..|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99998654


No 285
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.85  E-value=0.045  Score=56.78  Aligned_cols=31  Identities=29%  Similarity=0.368  Sum_probs=25.6

Q ss_pred             ceEecccCCCCeeE------cCCCCEEEEeccCcccc
Q 040363          376 CIIHRDIKPTNILI------NADFQAKLSDFGLSKVM  406 (548)
Q Consensus       376 ~IvH~DlKp~NILl------~~~~~~kL~DFGla~~~  406 (548)
                      .++|+|+.+.|||+      +++..+.++||..|..-
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n  281 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence            36799999999999      44567999999988653


No 286
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.56  E-value=1.2  Score=41.79  Aligned_cols=115  Identities=13%  Similarity=0.165  Sum_probs=77.4

Q ss_pred             CCCceeeeecccccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHHHhhhCCCCceEecccCCCCeeE
Q 040363          310 QHPNLVALLSYCEDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLWFLHTYPEGCIIHRDIKPTNILI  389 (548)
Q Consensus       310 ~hpnIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH~DlKp~NILl  389 (548)
                      .||+.+.. .+-++++...+.++.-+.  ...+-  .-..++...+++++.+++....++++     -+|--+.|+||++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~--~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f  112 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFD--NIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFF  112 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGG--GGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcc--cCCHH--HHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEE
Confidence            47888765 344555665555555442  22221  22457888999999999998866653     4788999999999


Q ss_pred             cCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCC
Q 040363          390 NADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       390 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      +.++.+++.-.|+-..+.                  |.     .++...=.-.+=+++..+++++..|
T Consensus       113 ~~~~~p~i~~RGik~~l~------------------P~-----~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          113 TRDGLPIAKTRGLQNVVD------------------PL-----PVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             CTTSCEEESCCEETTTBS------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             cCCCCEEEEEccCccCCC------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            999999998777543322                  21     1222233446778888999998876


No 287
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=83.55  E-value=0.16  Score=35.04  Aligned_cols=27  Identities=15%  Similarity=-0.072  Sum_probs=16.2

Q ss_pred             CCCceecceeehhHHHHHHHHHHHHHH
Q 040363          176 NNGKATADVCRFAVLVTLVGSWVDNAK  202 (548)
Q Consensus       176 ~~~i~~~~~~~l~vl~~l~~~~~~~~k  202 (548)
                      ...|+.+++.++++++++++.+++..|
T Consensus        10 ~~~IA~gVVgGv~~~~ii~~~~~~~~R   36 (44)
T 2ks1_B           10 IPSIATGMVGALLLLLVVALGIGLFMR   36 (44)
T ss_dssp             SSSSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEeehhHHHHHHHHHHHHHHHHhh
Confidence            345677777777666655555544444


No 288
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.34  E-value=1.9  Score=40.68  Aligned_cols=114  Identities=13%  Similarity=0.115  Sum_probs=75.1

Q ss_pred             CCCceeeeecccccCCceEEEEEecCCCChhHHhhhccCcchHHHHHHHHHHHHHHHH-HhhhCCCCceEecccCCCCee
Q 040363          310 QHPNLVALLSYCEDHNESFLVYELCHNGNLSEWLYGKAGVLSWIQRLKIAIDSATGLW-FLHTYPEGCIIHRDIKPTNIL  388 (548)
Q Consensus       310 ~hpnIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~aL~-yLH~~~~~~IvH~DlKp~NIL  388 (548)
                      .||++..-  .-.+++...+.++.-+++.=...+    ..++...+++++.+++.... +++.     -+|--+.|+||+
T Consensus        48 ~~~~f~~~--I~~~eD~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~  116 (219)
T 4ano_A           48 VDPCIVRD--IDVSEDEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLM  116 (219)
T ss_dssp             SCSSSEEE--EEECSSEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEE
T ss_pred             cCCCCCeE--EEEeCCEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEE
Confidence            47777332  235566666667665444333333    35778889999999988776 5553     578899999999


Q ss_pred             EcCCCCEEEEeccCcccccCCCCcccccccCCCCccCcccccCCCCCccccHHHHHHHHHHHHcCCCCC
Q 040363          389 INADFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYVDPEYRRNHHVSTSGDVYSFGVVLLQLLSGQRVI  457 (548)
Q Consensus       389 l~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~eLltG~~pf  457 (548)
                      ++.++.+++.-.|+-..+                  +|.-     .++.-=+-.+=+++..++.++..|
T Consensus       117 f~~~~~p~i~hRGi~~~l------------------pP~e-----~~ee~fl~qyKali~all~~K~~F  162 (219)
T 4ano_A          117 FNRALEPFFLHVGVKESL------------------PPDE-----WDDERLLREVKATVLALTEGEYRF  162 (219)
T ss_dssp             ECTTCCEEESCCEETTTB------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCH
T ss_pred             EeCCCcEEEEEcCCcccC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCH
Confidence            999999999887754332                  2221     122222345667788888887755


No 289
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=67.00  E-value=0.51  Score=49.85  Aligned_cols=57  Identities=12%  Similarity=0.088  Sum_probs=16.6

Q ss_pred             ceeeeeecCceEEEEEEEcC-CcEEEE------EEecCc----chHHHHHHHHHhcccCCCCceeeeeccc
Q 040363          262 ASNYIGQGVAGKVYKGILSN-GQQVAV------KHIISD----GYVDTFVREVRSLSHVQHPNLVALLSYC  321 (548)
Q Consensus       262 ~~~~LG~G~fg~Vy~a~~~~-g~~vAv------K~i~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~  321 (548)
                      +.+.||   ||.||+|.+.. ..+||+      |.....    .....+.+|..+++.++|||+++.+++.
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            345666   99999999743 467888      765432    2234678888999999999999988764


No 290
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=53.70  E-value=0.77  Score=31.60  Aligned_cols=26  Identities=12%  Similarity=0.011  Sum_probs=15.1

Q ss_pred             CCceecceeehhHHHHHHHHHHHHHH
Q 040363          177 NGKATADVCRFAVLVTLVGSWVDNAK  202 (548)
Q Consensus       177 ~~i~~~~~~~l~vl~~l~~~~~~~~k  202 (548)
                      ..|+.+++.++++++++++.+++..|
T Consensus        10 ~aIA~gVVgGv~~v~ii~~~~~~~~R   35 (44)
T 2l2t_A           10 PLIAAGVIGGLFILVIVGLTFAVYVR   35 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEeehHHHHHHHHHHHHHHHHhh
Confidence            34666677767666555555444444


No 291
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=50.62  E-value=36  Score=33.95  Aligned_cols=141  Identities=13%  Similarity=0.074  Sum_probs=71.2

Q ss_pred             ccceeeeeecCceEEEEEEEcCCcEEEEEEecCcchHHHHHHHHHhcccCCCCceeeeecc-------------------
Q 040363          260 LSASNYIGQGVAGKVYKGILSNGQQVAVKHIISDGYVDTFVREVRSLSHVQHPNLVALLSY-------------------  320 (548)
Q Consensus       260 y~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~i~~~~~~~~~~~E~~il~~l~hpnIv~l~~~-------------------  320 (548)
                      ++.++..-.|.. .||.+.. ++..++||-. ..-..+.+-.++...-.+.-|+..-+.-.                   
T Consensus        71 v~~I~~s~~Gst-gvff~~t-d~~~~VVK~s-~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~  147 (342)
T 1cja_A           71 FKGIERSEKGTE-GLFFVET-ESGVFIVKRS-TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR  147 (342)
T ss_dssp             EEEEEECCSTTS-CEEEEEE-SSCEEEEECC-TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred             eeEEEeccCCCC-CeEEEEe-CCCEEEEeCc-HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence            444455555554 4555555 5788999944 22223344445544445555553222211                   


Q ss_pred             ---cccCCceEEEEEecCCCChhHHhhhc-cCcchHHHHHHHHHHHHHHHHHhhhCCCCc-eEe-cccCCCCeeEcCCCC
Q 040363          321 ---CEDHNESFLVYELCHNGNLSEWLYGK-AGVLSWIQRLKIAIDSATGLWFLHTYPEGC-IIH-RDIKPTNILINADFQ  394 (548)
Q Consensus       321 ---~~~~~~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~-IvH-~DlKp~NILl~~~~~  394 (548)
                         ....+..+++|+|.+|..|...-... ...+.......+..  +-++..+....++. .+. .--.|+|||++.++.
T Consensus       148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~  225 (342)
T 1cja_A          148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA  225 (342)
T ss_dssp             HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred             HHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence               01122456999999876665432110 01122222222111  23344444444332 221 124789999987655


Q ss_pred             -EEEEeccCccc
Q 040363          395 -AKLSDFGLSKV  405 (548)
Q Consensus       395 -~kL~DFGla~~  405 (548)
                       +.++|-+.+..
T Consensus       226 ~~~~IDhn~af~  237 (342)
T 1cja_A          226 TVVPIDSKIIPL  237 (342)
T ss_dssp             CEEECSCCCCCC
T ss_pred             eEEEEcCCcccc
Confidence             88899888755


No 292
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=47.56  E-value=5.8  Score=27.18  Aligned_cols=17  Identities=18%  Similarity=-0.046  Sum_probs=7.0

Q ss_pred             hhHHHHHHHHHHHHHHH
Q 040363          187 FAVLVTLVGSWVDNAKW  203 (548)
Q Consensus       187 l~vl~~l~~~~~~~~k~  203 (548)
                      +.+++++.+.+.++.|+
T Consensus        21 vll~vi~~l~~~~~~RR   37 (44)
T 2jwa_A           21 ILLVVVLGVVFGILIKR   37 (44)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhheeh
Confidence            44444444444434433


No 293
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=32.22  E-value=3.9  Score=43.09  Aligned_cols=29  Identities=14%  Similarity=0.032  Sum_probs=25.1

Q ss_pred             HHHHHHHHHhcccCCCCceeeeecccccC
Q 040363          296 VDTFVREVRSLSHVQHPNLVALLSYCEDH  324 (548)
Q Consensus       296 ~~~~~~E~~il~~l~hpnIv~l~~~~~~~  324 (548)
                      .++|..|++.+.+++|+|+|+++|||...
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            45799999999999999999999999655


No 294
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=31.36  E-value=2.1e+02  Score=30.85  Aligned_cols=46  Identities=15%  Similarity=0.011  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHH--HHHHHhhhCCCCceEecccCCCCeeEcCCCCEEEEeccCcc
Q 040363          352 WIQRLKIAIDSA--TGLWFLHTYPEGCIIHRDIKPTNILINADFQAKLSDFGLSK  404 (548)
Q Consensus       352 ~~~~~~i~~qia--~aL~yLH~~~~~~IvH~DlKp~NILl~~~~~~kL~DFGla~  404 (548)
                      +..+..++..+|  ..+.|+=..|       |=.++||||+.+|++.=+|||.+-
T Consensus       454 ~~a~~nF~~S~A~ySvv~YILGig-------DRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYILGVG-------DRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCC-------CCCTTSEEECTTSCEEECCCSSCT
T ss_pred             HHHHHHHHHHHHHHhHhheeeecc-------CCCCcceeEcCCCCEeeeehHHhh
Confidence            344455554433  3455665444       788999999999999999999874


No 295
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=30.72  E-value=21  Score=22.88  Aligned_cols=22  Identities=14%  Similarity=0.129  Sum_probs=13.9

Q ss_pred             eecceeehhHHHHHHHHHHHHH
Q 040363          180 ATADVCRFAVLVTLVGSWVDNA  201 (548)
Q Consensus       180 ~~~~~~~l~vl~~l~~~~~~~~  201 (548)
                      ++.+++|++|+++.++.-+.++
T Consensus         9 alt~i~gl~vif~~lg~tflyw   30 (40)
T 2l9u_A            9 ALTVIAGLVVIFMMLGGTFLYW   30 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCceeEEE
Confidence            4557788888776665544433


Done!