BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040365
(514 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/514 (76%), Positives = 457/514 (88%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWNTVI G A+NG++E+AL +VR+MGN +L+PDSFTLSSVLPIFA+YV+++KG
Sbjct: 196 MPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYAIR+G DA+V IGSSLI+MYAKC RV+DS R+F +LP D ISWNSIIAGCVQN
Sbjct: 256 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+FDEGLKFF+QMLIAKIKP HVSFSSIMPACAHLTTLHLGKQLHG IIR+ FD N+FIA
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA 375
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAKCGNIR AR IFDKM+L+D+VSWTA+IMG ALHG+A+DAISLF++ME +GVK
Sbjct: 376 SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVK 435
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAF+AVLTACSHAGL+D+AW YFNSMT+DY I P EHYAAVADLLGR G+L+EAYE
Sbjct: 436 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYE 495
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FIS+MH PT +VW TLL+ACRVHKN+ELA KV++K+F +DP N+GAYV+LSN Y+AA R
Sbjct: 496 FISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGR 555
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKDA LR+ MR+KGMKK PACSWIE+KNK +AFVAGDKSHP+Y RINEALK LLE+ME+
Sbjct: 556 WKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMER 615
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYV DT EVLHDVEEEQK+ LL HSERLAI FGII TP GTTIR+ KNLRVC DCHTA
Sbjct: 616 EGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTA 675
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REI+VRDNSRFHHF+DGKCSCGD+W
Sbjct: 676 TKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 147/278 (52%), Gaps = 29/278 (10%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
++W ++I +GL+ +L+ QM PD SVL D+ G+ +HG
Sbjct: 72 LAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGC 131
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSH-----------------------------R 97
IR G+ ++ ++L+NMY+K +E+ + +
Sbjct: 132 IIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRK 191
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F ++P +D +SWN++I+G QNG+ ++ L R+M A ++P + SS++P A
Sbjct: 192 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 251
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L GK++HG IRNG+D ++FI SSL+DMYAKC + + +F + HD +SW ++I G
Sbjct: 252 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 311
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+G + + F+QM +KPN V+F +++ AC+H
Sbjct: 312 CVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH 349
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/514 (72%), Positives = 437/514 (85%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ARNGLYEE L ++R+MG NLKPDSFTLSSVLP+ A+ VD+ +G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG +IR GLDA++ + SSLI+MYAKC RV DS R+F LL +D ISWNSIIAGCVQN
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GLFDEGL+FFRQML+AKIKP+ SFSSIMPACAHLTTLHLGKQLHG I RNGFD+N+FIA
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCGNIR A+ IFD+M L D+VSWTA+IMG ALHG A DAI LFEQME +G+K
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAF+AVLTACSH GL+D+AW YFNSMT+D+GIAP EHYAAV+DLLGRAG+L+EAY+
Sbjct: 439 PNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 498
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI MH GPT ++W TLLSACRVH N+++A KVA +I +DPNN GAY++L+N Y+AARR
Sbjct: 499 FICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 558
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+AA R MR G++KTPACSWIEVKNK YAF+AGD+SHP Y +I EA++ L+E ME+
Sbjct: 559 WKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEK 618
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPDT EV HDVEEEQKK L+ HSERLAIVFGII TP G TIR+ KNLRVC DCHTA
Sbjct: 619 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTA 678
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REI+VRDNSRFHHF++G CSCGDYW
Sbjct: 679 TKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 190/380 (50%), Gaps = 36/380 (9%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
++W +VI +GL ++L M L PD SVL A +D+ G+ +HGY
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHR----------------------------- 97
IR GLD ++ G++L+NMY+K +E+S R
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 98 ---LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+F ++P KD +SWN+IIAG +NGL++E L+ R+M A +KP + SS++P A
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ GK++HGC IR G D ++++ASSL+DMYAKC + + +F + D +SW ++
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I G +G + + F QM +KP S +F +++ AC+H + +T++ G
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-G 370
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
+ +++ D+ + G ++ A + M + W ++ C +H A ++
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS-WTAMIMGCALHGQAPDAIELF 429
Query: 335 EKIFM--IDPNNMGAYVILS 352
E++ I PN++ +L+
Sbjct: 430 EQMETEGIKPNHVAFMAVLT 449
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+Y+ + DS RLF + A++W S+I +GL + L F ML + + P H
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------CGNIRLA-- 196
F S++ +CA L L+LG+ LHG IIR G D +++ ++L++MY+K G RL
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 197 ------------------------RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
R IF+ M D+VSW +I GNA +G + + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 233 QMEKDGVKPNSVAFVAVL 250
+M +KP+S +VL
Sbjct: 229 EMGGANLKPDSFTLSSVL 246
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/514 (73%), Positives = 437/514 (85%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ARNGLY E L +VR+MG NLKPDSFTLSSVLP+ A+ VD+ KG
Sbjct: 260 MPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKG 319
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG +IR GLDA V + SSLI+MYAKC RV DS+R+F LL +D ISWNSIIAGCVQN
Sbjct: 320 KEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQN 379
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GLFDEGLKFFRQML+AKIKP+ SFSSIMPACAHLTTLHLGKQLHG I RNGFD+N+FIA
Sbjct: 380 GLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 439
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCGNIR AR IFD+M L D+VSWTA+IMG ALHG+A DAI LFEQM+ +G++
Sbjct: 440 SSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIE 499
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAF+AVLTACSHAGL+D+AW YFNSMT D+GIAP EHYAAV+DLLGRAG+L+EAY+
Sbjct: 500 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 559
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M GPT +VW TLLSACRVHKNV++A KVA +I +DP N GAY++L+N Y+AARR
Sbjct: 560 FICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARR 619
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+AA R +R G++KTPACSWIEV+NK YAF+AGD+SHP Y +I EA++ L+E ME+
Sbjct: 620 WKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEK 679
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPDT EV HDVEEEQKK L+ HSERLAIVFGII TP GTTIR+ KNLRVC DCHTA
Sbjct: 680 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTA 739
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REI+VRDNSRFHHF++G CSCGDYW
Sbjct: 740 TKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
V+ ++F ++P KD +SWN+IIAG +NGL+ E L R+M A +KP + SS++P
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
A + GK++HGC IR G D +++ASSL+DMYAKC + + +F + D +SW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
++I G +G + + F QM +KP S +F +++ AC+H + +T+
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
+ G + +++ D+ + G ++ A + M + W ++ C +H + A
Sbjct: 430 N-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS-WTAMIMGCALHGHALDAI 487
Query: 332 KVAEKIFM--IDPNNMGAYVILS 352
++ E++ I+PN + +L+
Sbjct: 488 ELFEQMKTEGIEPNYVAFMAVLT 510
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 8/142 (5%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+Y+ + DS RLF L A++W S+I +GL + L F ML + + P H
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA------KCGNIRL-AR 197
F S++ ACA L L+LG+ LHG IIR G D +++ ++L++MY+ K G RL A
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 198 CIFDKM-DLHDIVSWTAVIMGN 218
+ D+M + V +V++GN
Sbjct: 171 QVLDEMTERTRSVRTASVLVGN 192
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
++W +VI +GL ++L M L PD SVL A +D+ G+ +HGY
Sbjct: 74 LAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGY 133
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHR--------LFCLLPVKDAISWNSIIAGCV 118
IR GLD ++ G++L+NMY+K ++ S R L + ++ S++ G
Sbjct: 134 IIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQ 193
Query: 119 QNGLFD----------EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
+ D +F Q+L KPR S M AC +LG+Q+
Sbjct: 194 GRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPR--SEYREMEAC------NLGQQIKD-- 243
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
I+ S+ ++ R IF+ M D+VSW +I GNA +G + +
Sbjct: 244 ----------ISHSM--------SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETL 285
Query: 229 SLFEQMEKDGVKPNSVAFVAVL 250
++ +M +KP+S +VL
Sbjct: 286 TMVREMGGANLKPDSFTLSSVL 307
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/514 (72%), Positives = 432/514 (84%), Gaps = 7/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ARNGLYEE L ++R+MG NLKPDSFTLSSVLP+ A+ VD+ +G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG +IR GLDA++ + SSLI+MYAKC RV DS R+F LL +D ISWNSIIAGCVQN
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GLFDEGL+FFRQML+AKIKP+ SFSSIMPACAHLTTLHLGKQLHG I RNGFD+N+FIA
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCGNIR A+ IFD+M L D+VSWTA+IMG ALHG A DAI LFEQME +G+K
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
AVLTACSH GL+D+AW YFNSMT+D+GIAP EHYAAV+DLLGRAG+L+EAY+
Sbjct: 439 -------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI MH GPT ++W TLLSACRVHKN+++A KVA +I +DPNN GAY++L+N Y+AARR
Sbjct: 492 FICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+AA R MR G++KTPACSWIEVKNK YAF+AGD+SHP Y +I EA++ L+E ME+
Sbjct: 552 WKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEK 611
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPDT EV HDVEEEQKK L+ HSERLAIVFGII TP G TIR+ KNLRVC DCHTA
Sbjct: 612 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTA 671
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REI+VRDNSRFHHF++G CSCGDYW
Sbjct: 672 TKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 34/363 (9%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
++W +VI +GL ++L M L PD SVL A +D+ G+ +HGY
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHR----------------------------- 97
IR GLD ++ G++L+NMY+K +E+S R
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 98 ---LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+F ++P KD +SWN+IIAG +NGL++E L+ R+M A +KP + SS++P A
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ GK++HGC IR G D ++++ASSL+DMYAKC + + +F + D +SW ++
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I G +G + + F QM +KP S +F +++ AC+H + +T++ G
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-G 370
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
+ +++ D+ + G ++ A + M + W ++ C +H A ++
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS-WTAMIMGCALHGQAPDAIELF 429
Query: 335 EKI 337
E++
Sbjct: 430 EQM 432
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+Y+ + DS RLF + A++W S+I +GL + L F ML + + P H
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------CGNIRLA-- 196
F S++ +CA L L+LG+ LHG IIR G D +++ ++L++MY+K G RL
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 197 ------------------------RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
R IF+ M D+VSW +I GNA +G + + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 233 QMEKDGVKPNSVAFVAVL 250
+M +KP+S +VL
Sbjct: 229 EMGGANLKPDSFTLSSVL 246
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/493 (76%), Positives = 436/493 (88%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWNTVI G A+NG++E+AL +VR+MGN +L+PDSFTLSSVLPIFA+YV+++KG
Sbjct: 156 MPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG 215
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYAIR+G DA+V IGSSLI+MYAKC RV+DS R+F +LP D ISWNSIIAGCVQN
Sbjct: 216 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 275
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+FDEGLKFF+QMLIAKIKP HVSFSSIMPACAHLTTLHLGKQLHG IIR+ FD N+FIA
Sbjct: 276 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA 335
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAKCGNIR AR IFDKM+L+D+VSWTA+IMG ALHG+A+DAISLF++ME +GVK
Sbjct: 336 SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVK 395
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAF+AVLTACSHAGL+D+AW YFNSMT+DY I P EHYAAVADLLGR G+L+EAYE
Sbjct: 396 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYE 455
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FIS+MH PT +VW TLL+ACRVHKN+ELA KV++K+F +DP N+GAYV+LSN Y+AA R
Sbjct: 456 FISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGR 515
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKDA LR+ MR+KGMKK PACSWIE+KNK +AFVAGDKSHP+Y RINEALK LLE+ME+
Sbjct: 516 WKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMER 575
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYV DT EVLHDVEEEQK+ LL HSERLAI FGII TP GTTIR+ KNLRVC DCHTA
Sbjct: 576 EGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTA 635
Query: 481 IKFISKIVQREII 493
KFISKIV REI+
Sbjct: 636 TKFISKIVGREIV 648
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 101/159 (63%)
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
++F ++P +D +SWN++I+G QNG+ ++ L R+M A ++P + SS++P A
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L GK++HG IRNG+D ++FI SSL+DMYAKC + + +F + HD +SW ++I
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
G +G + + F+QM +KPN V+F +++ AC+H
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH 309
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 58/233 (24%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD SVL D+ G+ +HG IR G+ ++ ++L+NMY+K +E+
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEE---- 63
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTT 157
G VQ +F ++ I +PR + S +H
Sbjct: 64 -----------------GGVQ--------RFCDSKMLGGIPEPREIGKCS----NSHDLP 94
Query: 158 LHLGKQLHGCIIRNGFDDNM-------------FIASSLLDMYAK-------CGNIRLAR 197
L +++ G I +NG + M F D+Y+K G++R
Sbjct: 95 CELDERVAG-IDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRK-- 151
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+F+ M DIVSW VI GNA +G DA+ + +M ++P+S +VL
Sbjct: 152 -VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 203
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
ML + P H F S++ +C + L G+ +HGCIIR G +++ ++L++MY+K
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK 57
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/516 (71%), Positives = 437/516 (84%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+VSWNTVI G A+NG+YEEALN+V++MG NL+PDSFTLSS+LPIF ++ +V KG
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYAIRHG D +V IGSSLI+MYAKC +VE S F LL +DAISWNSIIAGCVQN
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G FD+GL FFR+ML K+KP VSFSS++PACAHLT L+LGKQLH IIR GFDDN FIA
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
SSLLDMYAKCGNI++AR IF+K+++ D+VSWTA+IMG A+HG+A DA+SLFE+M DG
Sbjct: 339 SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDG 398
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP VAF+AVLTACSHAGL+D+ W YFNSM +D+G+AP EHYAAVADLLGRAG+L+EA
Sbjct: 399 VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FISNM PT +VW TLL+ACR HKN+ELA KV KI ++DP NMGA+VI+SN Y+AA
Sbjct: 459 YDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAA 518
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+RW+DAA LRV MR G+KKTPACSWIEV NK + F+AGDKSHP+Y +INEAL LLE+M
Sbjct: 519 QRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQM 578
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+EGYV DT EVLHDV+EE K++LL HSERLAI FGII T GTTIR+IKN+RVC DCH
Sbjct: 579 EKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCH 638
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TAIKF++KIV REIIVRDNSRFHHF++G CSCGDYW
Sbjct: 639 TAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 38/348 (10%)
Query: 7 VSWNTVIVGLARNGLYEEAL---NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++W +I A +GL +L N++R G + PD S+L + + +
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFG---ISPDRHLFPSLLRASTLFKHFNLAQSL 98
Query: 64 HGYAIRHGLDANVCIGSSLINMYAK----------------------CARVEDSHRLFCL 101
H IR G ++ ++L+NMY+K +++ +LF
Sbjct: 99 HAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDR 158
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+PV+D +SWN++IAG QNG+++E L ++M ++P + SSI+P + G
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K++HG IR+GFD ++FI SSL+DMYAKC + L+ C F + D +SW ++I G +
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + F +M K+ VKP V+F +V+ AC+H ++ Y I F+
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALN-----LGKQLHAYIIRLGFDD 333
Query: 282 YAAVA----DLLGRAGKLQEAYEFISNMHAGPTENV-WLTLLSACRVH 324
+A D+ + G ++ A + + + V W ++ C +H
Sbjct: 334 NKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+++W II +GL L F + I P F S++ A +L + LH
Sbjct: 41 SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100
Query: 167 CIIRNGFDDNMFIASSLLDMYAK----------------------CGNIRLARCIFDKMD 204
+IR GF +++ A++L++MY+K I R +FD+M
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+ D+VSW VI GNA +G +A+++ ++M K+ ++P+S ++L
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSIL 206
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/516 (70%), Positives = 436/516 (84%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MPV D+VSWNTVI G A+NG+Y EAL++VR+MG N LKPDSFTLSS+LPIFA++VDV K
Sbjct: 186 MPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNK 245
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHGYA+R+G D +V IGSSLI+MYAKC R+E S R F +LP KDAISWNSIIAGCVQ
Sbjct: 246 GKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQ 305
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG FD GL FFR+ML +KP VSFSS++PACAHLT L LG+QLHGCI+R GFDDN FI
Sbjct: 306 NGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFI 365
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
ASSL+DMYAKCGNI++AR +FD++D D+V+WTA+IMG A+HG+A DA+SLFE M +DGV
Sbjct: 366 ASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGV 425
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P VAF+AVLTACSHAGL+D+ W YFNSM +D+GIAP EHYAAVADLLGRAG+L+EAY
Sbjct: 426 RPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAY 485
Query: 300 EFISNMHA-GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FISNM PT +VW LL+ACR HK+VELA KV +K+ +D NMGAYV++SN Y+AA
Sbjct: 486 DFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAA 545
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+RWKDAA LR+ MR KG+KKTPACSWIEV N+ + F+AGDKSHP+Y +IN+AL LLE+M
Sbjct: 546 QRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQM 605
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+EGYV DT +VLHDV+EE K+ LL+ HSERLAI +GII T GTTIR+IKN+RVC DCH
Sbjct: 606 EKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCH 665
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TAIKFI+KIV REI VRDNSRFHHF++G CSCGDYW
Sbjct: 666 TAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 143/264 (54%), Gaps = 16/264 (6%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+W+++I + L + + M ++++ P+ S+L +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 68 IRHGLDANVCIGSSLINMYAK---CARVED------------SHRLFCLLPVKDAISWNS 112
+R GLD+++ I ++LIN YAK +V D ++F ++PV+D +SWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 113 IIAGCVQNGLFDEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+IAG QNG++ E L R+M K+KP + SSI+P A ++ GK++HG +RN
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
GFD ++FI SSL+DMYAKC + + F + D +SW ++I G +G + F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316
Query: 232 EQMEKDGVKPNSVAFVAVLTACSH 255
+M K+ VKP +V+F +V+ AC+H
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAH 340
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/514 (67%), Positives = 429/514 (83%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VS+NTVI G A++G+YE+AL +VR+MG +LKPD+FTLSSVLPIF++YVDV+KG
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKG 225
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGY IR G+D++V IGSSL++MYAK AR+EDS R+F L +D+ISWNS++AG VQN
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E L+ FRQM+ AK++P V+FSS++PACAHL TLHLGKQLHG ++R GF N+FIA
Sbjct: 286 GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA 345
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY+KCGNI+ AR IFD+M+LHD VSWTA+IMG+ALHG+ H+A+SLFE+M++ GVK
Sbjct: 346 SALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 405
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAFVAVLTACSH GL+D+AW YFNSMTK YG+ EHYAAVADLLGRAGKL+EAY+
Sbjct: 406 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYD 465
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FIS M PT +VW TLLS+C VHKN+ELA KVAEKIF ID NMGAYV++ N YA+ R
Sbjct: 466 FISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGR 525
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+ A LR+ +R KG++K PACSWIE+KNK + FV+GD+SHP RINE LK ++E+ME+
Sbjct: 526 WKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEK 585
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYV DT VLHDV+EE K+ LL+ HSERLA+ FGII T GTTIR+ KN+R+C DCH A
Sbjct: 586 EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 645
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFISKI +REIIVRDNSRFHHF G CSCGDYW
Sbjct: 646 IKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 185/349 (53%), Gaps = 4/349 (1%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+++W +VI L+ AL +M PD SVL +D+ G+ +HG
Sbjct: 70 VLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ +R G+D ++ G++L+NMY+K ++ ++F L+P KD +S+N++IAG Q+G++++
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYED 189
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L+ R+M + +KP + SS++P + + GK++HG +IR G D +++I SSL+D
Sbjct: 190 ALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVD 249
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAK I + +F + D +SW +++ G +G ++A+ LF QM V+P +VA
Sbjct: 250 MYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVA 309
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F +V+ AC+H + + + G + +A+ D+ + G +Q A + M
Sbjct: 310 FSSVIPACAHLATLHLGKQLHGYVLRG-GFGRNIFIASALVDMYSKCGNIQAARKIFDRM 368
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ E W ++ +H + A + E++ + PN + +L+
Sbjct: 369 NL-HDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 416
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ K++H IR ++ S +I++Y + ++ +F L ++W S+I
Sbjct: 23 QAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
LF L F +M + P H F S++ +C + L G+ +HG I+R G D +++
Sbjct: 82 DQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L++MY+K I R +F+ M D+VS+ VI G A G DA+ + +M
Sbjct: 142 TGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD 201
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP++ +VL S + K + + GI +++ D+ ++ +++++
Sbjct: 202 LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDS 260
Query: 299 YEFISNMH 306
S+++
Sbjct: 261 ERVFSHLY 268
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/514 (67%), Positives = 426/514 (82%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VS+NT+I G A++G+YE+AL +VR+MG +LKPDSFTLSSVLPIF++YVDVIKG
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGY IR G+D++V IGSSL++MYAK AR+EDS R+F L +D ISWNS++AG VQN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E L+ FRQM+ AK+KP V+FSS++PACAHL TLHLGKQLHG ++R GF N+FIA
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY+KCGNI+ AR IFD+M++ D VSWTA+IMG+ALHG+ H+A+SLFE+M++ GVK
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAFVAVLTACSH GL+D+AW YFNSMTK YG+ EHYAAVADLLGRAGKL+EAY
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FIS M PT +VW TLLS+C VHKN+ELA KVAEKIF +D NMGAYV++ N YA+ R
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+ A LR+ MR KG++K PACSWIE+KNK + FV+GD+SHP +INE LK ++E+ME+
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYV DT VLHDV+EE K+ LL+ HSERLA+ FGII T GTTIR+ KN+R+C DCH A
Sbjct: 622 EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 681
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFISKI +REIIVRDNSRFHHF G CSCGDYW
Sbjct: 682 IKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 187/385 (48%), Gaps = 40/385 (10%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+++W +VI L+ +AL +M PD SVL +D+ G+ +HG
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 66 YAIRHGLDANVCIGSSLINMYAKC-----------------ARVEDS------------- 95
+ +R G+D ++ G++L+NMYAK R +S
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 96 ------HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
R+F ++P KD +S+N+IIAG Q+G++++ L+ R+M +KP + SS++
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
P + + GK++HG +IR G D +++I SSL+DMYAK I + +F ++ D +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW +++ G +G ++A+ LF QM VKP +VAF +V+ AC+H + +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ G + +A+ D+ + G ++ A + M+ E W ++ +H +
Sbjct: 370 LRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHE 427
Query: 330 AGKVAEKIFM--IDPNNMGAYVILS 352
A + E++ + PN + +L+
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLT 452
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ K++H IR ++ S +I++Y + ++ LF L ++W S+I
Sbjct: 23 QAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
LF + L F +M + P H F S++ +C + L G+ +HG I+R G D +++
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 179 IASSLLDMYAK---------CGN---------------------------IRLARCIFDK 202
++L++MYAK GN I R +F+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M D+VS+ +I G A G DA+ + +M +KP+S +VL S + K
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ + GI +++ D+ ++ +++++ S ++
Sbjct: 262 KEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/514 (61%), Positives = 402/514 (78%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWNT+++G A +G + EAL +VR+M KPDSFTLSSVLPIFA+ DV +G
Sbjct: 133 MPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRG 192
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+HG+A R+G +V +GSSLI+MYA C R + S ++F LPV+DAI WNS++AGC QN
Sbjct: 193 MELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQN 252
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L FR+ML + IKP V+FSS++PAC +L +L LGKQLH +IR GFD N+FI+
Sbjct: 253 GSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFIS 312
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMY KCGN+ +AR IFD++ DIVSWTA+IMG+ALHG A +A+ LF++ME +K
Sbjct: 313 SSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLK 372
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+AVLTACSHAGL+DK W YFNSM+ YGI PS EH+AA+AD LGR GKL+EAY
Sbjct: 373 PNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYN 432
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FIS M PT +VW TLL AC+VHKN LA +VA+KIF ++P +MG+++ILSNTY+++ R
Sbjct: 433 FISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGR 492
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +AA LR MR KGM+K PACSWIEVKNK + FVA DKSHP+Y RI +AL E+M +
Sbjct: 493 WNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVR 552
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GYVP+T +V D+EEEQK ++L HSE+LAIVFGII TP GTTIR++KNLRVC DCHT
Sbjct: 553 QGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTV 612
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REI++RD +RFHHF+DG CSCGD+W
Sbjct: 613 TKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 14/208 (6%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--------------VEDSHRLFCLLPVK 105
G +H A+R G A+ ++L+N+Y K +E ++F +P K
Sbjct: 77 GASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK 136
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
D +SWN+++ GC ++G E L R+M KP + SS++P A + G +LH
Sbjct: 137 DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELH 196
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
G RNGF D++F+ SSL+DMYA C + +FD + + D + W +++ G A +G+
Sbjct: 197 GFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVD 256
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+A+ LF +M G+KP V F +++ AC
Sbjct: 257 EALGLFRRMLHSGIKPMPVTFSSLIPAC 284
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 24/242 (9%)
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP----ACAHLTTLHLGKQL 164
SW I G F + F +M + S + +P +CA L LG L
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGN--------------IRLARCIFDKMDLHDIVS 210
H +R+G + F A++LL++Y K + R +FD+M D+VS
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +++G A G +A+ L +M +DG KP+S +VL + + + T
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSACRVHKNVE 328
++ G +++ D+ + + + N+ P + +W ++L+ C + +V+
Sbjct: 201 RN-GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNL---PVRDAILWNSMLAGCAQNGSVD 256
Query: 329 LA 330
A
Sbjct: 257 EA 258
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/510 (59%), Positives = 388/510 (76%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWNT+++G A G + EAL VR+M +PDSFTLS+VLPIFA+ DV +G E+H
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVH 193
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+A R+G D++V +GSSLI+MYA C R + S ++F LPV+D I WNS++AGC QNG +
Sbjct: 194 GFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVE 253
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+ML A ++P V+FSS++P C +L +L GKQLH +I GF+DN+FI+SSL+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG I +A CIFDKM D+VSWTA+IMG ALHG A +A+ LFE+ME KPN +
Sbjct: 314 DMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+AVLTACSHAGL+DK W YF SM+ YGI P+ EH+AA+AD LGRAG+L EAY FIS
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISK 433
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT +VW TLL ACRVHKN LA +VA+KI ++P ++G++V+LSN Y+A+ RW +A
Sbjct: 434 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 493
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR KGMKK PACSWIEVK+K + FVA D+SHP+Y RI +AL E+M +EG+V
Sbjct: 494 AHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHV 553
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T++V D+EEE K +L HSE+LAIVFGII TP GT IR++KNLRVC DCHT KFI
Sbjct: 554 PNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFI 613
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REI+VRD +RFHHF+DG CSCGD+W
Sbjct: 614 SKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D + WN+++ G A+NG EEAL I R+M ++P T SS++P+ + + G
Sbjct: 231 LPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFG 290
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y I G + NV I SSLI+MY KC + +H +F + D +SW ++I G +
Sbjct: 291 KQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALH 350
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
G E L F +M + KP H++F +++ AC+H + G K G +
Sbjct: 351 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH 410
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L D + G + A KM + S W+ ++ +H N A + +++ +
Sbjct: 411 FAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME-- 468
Query: 239 VKPNSVAFVAVLT 251
++P S+ VL+
Sbjct: 469 LEPRSIGSHVVLS 481
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 171/372 (45%), Gaps = 35/372 (9%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDS---FTLSSVLPIFADYVDVIKGKEIHG 65
W I A G + +A+++ +M + P S +L + L A G +H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRM-RASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74
Query: 66 YAIRHGLDANVCIGSSLINMYAK--CARV-----------------EDSHRLFCLLPVKD 106
AIR G A+ ++L+N+Y K C+ + E ++F + +D
Sbjct: 75 LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN+++ GC + G E L F R+M +P + S+++P A + G ++HG
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
RNGFD ++F+ SSL+DMYA C + +FD + + D + W +++ G A +G+ +
Sbjct: 195 FAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEE 254
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----Y 282
A+ +F +M + GV+P V F +++ C + + F Y I FE
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASL-----RFGKQLHAYVICGGFEDNVFIS 309
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--I 340
+++ D+ + G++ A+ M + P W ++ +H A + E++ +
Sbjct: 310 SSLIDMYCKCGEISIAHCIFDKM-SSPDVVSWTAMIMGYALHGPAREALVLFERMELGNA 368
Query: 341 DPNNMGAYVILS 352
PN++ +L+
Sbjct: 369 KPNHITFLAVLT 380
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/515 (63%), Positives = 379/515 (73%), Gaps = 67/515 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWNTVI G A+NG++E+AL +VR+MGN +L+PDSFTLSSVLPIFA+YV+++KG
Sbjct: 196 MPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYAIR+G DA+V IGSSLI+MYAKC RV+DS R+F +LP D ISWNSIIAGCVQN
Sbjct: 256 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G+FDEGLKFF+QMLIAKIKP HVSFSSIMPACAHLTTLHLGKQLHG IIR G N
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPNY-- 373
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
V++ AV+ + G +A F M +D
Sbjct: 374 -----------------------------VAFMAVLTACSHAGLVDEAWKYFNSMTQD-- 402
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
Y I P EHYAAVADLLGR G+L+EAY
Sbjct: 403 ---------------------------------YRIIPGLEHYAAVADLLGRVGRLEEAY 429
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFIS+MH PT +VW TLL+ACRVHKN+ELA KV++K+F +DP N+GAYV+LSN Y+AA
Sbjct: 430 EFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAG 489
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RWKDA LR+ MR+KGMKK PACSWIE+KNK +AFVAGDKSHP+Y RINEALK LLE+ME
Sbjct: 490 RWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQME 549
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGYV DT EVLHDVEEEQK+ LL HSERLAI FGII TP GTTIR+ KNLRVC DCHT
Sbjct: 550 REGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHT 609
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFISKIV REI+VRDNSRFHHF+DGKCSCGD+W
Sbjct: 610 ATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/510 (59%), Positives = 386/510 (75%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSWNT+I+G A + ++EAL++VR+M PD+FTLS+VLPIFA+ D+ +G +H
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GYAI++G D +V +GSSLI+MYA C +++ S ++F DA+ WNS++AG QNG +
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+ML A ++P V+FSS++PA +L+ L LGKQLH +IR F+DN+FI+SSL+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 313
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCGN+ +AR +F+ + DIVSWTA+IMG ALHG +A LFE+ME VKPN +
Sbjct: 314 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 373
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+AVLTACSHAGL+D W YFNSM+ YG PS EH AA+AD LGRAG L EAY FIS
Sbjct: 374 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 433
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT +VW TLL ACRVHKN LA +VA+KIF ++P +MG++VILSN Y+A+ RW +A
Sbjct: 434 MKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEA 493
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR KGMKK PACSWIEVKNK + F+A DKSHP+Y RI +AL E+M ++GYV
Sbjct: 494 AQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYV 553
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ ++VL D+EEEQK+ +L HSE+LAIVFGII TP GTTIR++KNLRVC DCH A KFI
Sbjct: 554 PNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFI 613
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV REI+VRD +RFH F+DG CSCGD+W
Sbjct: 614 SKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 24/275 (8%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDS---FTLSSVLPIFADYVDVIKGKEIH 64
SW I A G + A+++ QM ++ P S +L + L A +H
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 65 GYAIRHGLDANVCIGSSLINMYAK--------------------CARVEDSHRLFCLLPV 104
AIR G A+ ++L+N+ K A E ++F +
Sbjct: 73 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+DA+SWN++I GC ++ E L R+M P + S+++P A + G +
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
HG I+NGFD+++F+ SSL+DMYA C + + +FD D V W +++ G A +G+
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 252
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+A+ +F +M + GV+P V F +++ A + L+
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLL 287
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/514 (50%), Positives = 348/514 (67%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D+ SWN +I G + N + EAL +M +KP+S T+ SVLP A + +G
Sbjct: 282 MPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQG 341
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGYAIR G ++N +G++L+NMYAKC V +++LF +P K+ ++WN+II+G Q+
Sbjct: 342 QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQH 401
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F +M IKP + S++PACAH L GKQ+HG IR+GF+ N+ +
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D+YAKCGN+ A+ +F++M D+VSWT +I+ +HG+ DA++LF +M++ G K
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTK 521
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ +AF A+LTACSHAGL+D+ YF M DYG+AP EHYA + DLLGRAG L EA
Sbjct: 522 LDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANG 581
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P NVW LL ACR+H N+EL + A+ +F +DP+N G YV+LSN YA A+R
Sbjct: 582 IIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQR 641
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A LR M+ KG+KK P CS + V F+ GD++HP +I L+ L E+M +
Sbjct: 642 WEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRK 701
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T L DVEEE K+N+L HSE+LAI FGII T G IRI+KNLRVC DCH A
Sbjct: 702 AGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNA 761
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REIIVRD +RFHH ++G CSCGDYW
Sbjct: 762 TKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 204/336 (60%), Gaps = 14/336 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN +I G ++NG EAL + +M +KP+S TL SV+P+ A + + +G
Sbjct: 181 MPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG 240
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH YAIR G++++V + + L+NMYAKC V +H+LF +P++D SWN+II G N
Sbjct: 241 KQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FF +M + IKP ++ S++PACAHL L G+Q+HG IR+GF+ N +
Sbjct: 301 SQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG 360
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAKCGN+ A +F++M ++V+W A+I G + HG+ H+A++LF +M+ G+K
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIK 420
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQ 296
P+S A V+VL AC+H +++ Y I FE V D+ + G +
Sbjct: 421 PDSFAIVSVLPACAHFLALEQG-----KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVN 475
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
A + M P ++V W T++ A +H + E A
Sbjct: 476 TAQKLFERM---PEQDVVSWTTMILAYGIHGHGEDA 508
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 181/327 (55%), Gaps = 14/327 (4%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ V W I+G +NG + +AL + QM + PD SV+ D+ G+++
Sbjct: 83 NNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKV 142
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H I G +++V +G++L +MY KC +E++ ++F +P +D +SWN+IIAG QNG
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L F +M + IKP + S+MP CAHL L GKQ+H IR+G + ++ + + L
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGL 262
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++MYAKCGN+ A +F++M + D+ SW A+I G +L+ H+A++ F +M+ G+KPNS
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQEAY 299
+ V+VL AC+H +++ Y I FE V + L + G + AY
Sbjct: 323 ITMVSVLPACAHLFALEQG-----QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAY 377
Query: 300 EFISNMHAGPTENV--WLTLLSACRVH 324
+ M P +NV W ++S H
Sbjct: 378 KLFERM---PKKNVVAWNAIISGYSQH 401
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/437 (56%), Positives = 324/437 (74%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSWNT+I+G A + ++EAL++VR+M PD+FTLS+VLPIFA+ D+ +G +H
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GYAI++G D +V +GSSLI+MYA C +++ S ++F DA+ WNS++AG QNG +
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 570
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+ML A ++P V+FSS++PA +L+ L LGKQLH +IR F+DN+FI+SSL+
Sbjct: 571 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 630
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCGN+ +AR +F+ + DIVSWTA+IMG ALHG +A LFE+ME VKPN +
Sbjct: 631 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 690
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+AVLTACSHAGL+D W YFNSM+ YG PS EH AA+AD LGRAG L EAY FIS
Sbjct: 691 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 750
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT +VW TLL ACRVHKN LA +VA+KIF ++P +MG++VILSN Y+A+ RW +A
Sbjct: 751 MKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEA 810
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR KGMKK PACSWIEVKNK + F+A DKSHP+Y RI +AL E+M ++GYV
Sbjct: 811 AQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYV 870
Query: 425 PDTKEVLHDVEEEQKKN 441
P+ ++VL D+EEEQK+
Sbjct: 871 PNMEDVLQDIEEEQKRE 887
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 24/275 (8%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDS---FTLSSVLPIFADYVDVIKGKEIH 64
SW I A G + A+++ QM ++ P S +L + L A +H
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 389
Query: 65 GYAIRHGLDANVCIGSSLINMYAK--------------------CARVEDSHRLFCLLPV 104
AIR G A+ ++L+N+ K A E ++F +
Sbjct: 390 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 449
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+DA+SWN++I GC ++ E L R+M P + S+++P A + G +
Sbjct: 450 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 509
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
HG I+NGFD+++F+ SSL+DMYA C + + +FD D V W +++ G A +G+
Sbjct: 510 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 569
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+A+ +F +M + GV+P V F +++ A + L+
Sbjct: 570 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLL 604
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/545 (44%), Positives = 339/545 (62%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+SWN +I G +GLY EA+ + M +PD T+SSVLP D D++ G IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCA-------------------------------RVE 93
GY I+ GL ++ C+ S+LI+MY KC+ +VE
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 94 DSHRLFCLLPVK----DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
S RLF L + + +SW S+IA C QNG E L+ FR+M IA +KP V+ ++
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
PAC ++ L GK H +R G ++++ S+L+DMYAKCG I+ +R FD + ++V
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
W AVI G A+HG A +A+ +F+ M++ G KP+ ++F VL+ACS +GL ++ YFNSM
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ YGI EHYA + LL RAGKL++AY I M P VW LLS+CRVH NV L
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSL 573
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
AEK+F ++P+N G Y++LSN YA+ W + +R M+NKG++K P CSWIEVKN
Sbjct: 574 GEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKN 633
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + +AGDKSHP +I E L +L M++ GY P+ VL DVEE+ K+ +L HSE+
Sbjct: 634 KVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEK 693
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+VFG++ TP G +++IKNLR+CGDCH IKFIS +REI VRD +RFHHF++G CS
Sbjct: 694 LAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACS 753
Query: 510 CGDYW 514
CGDYW
Sbjct: 754 CGDYW 758
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 36/313 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ S++T+I ++ + AL+ QM L PD+ L S + A +
Sbjct: 74 VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPA 133
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--------------------- 99
+++HG A G D++ + SSL++MY KC ++ D+HR+F
Sbjct: 134 RQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQ 193
Query: 100 -CLLPVK-------------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
C+ K + ISWN +IAG +GL+ E + F M + +P +
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTI 253
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++PA L L +G +HG +I+ G + ++S+L+DMY KC +FD+MD
Sbjct: 254 SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDH 313
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+ S A I G + +G ++ LF Q++ G++ N V++ +++ CS G +A
Sbjct: 314 MDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALEL 373
Query: 266 FNSMTKDYGIAPS 278
F M + G+ P+
Sbjct: 374 FREM-QIAGVKPN 385
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ ++ H + ++ GL + + + L++ YA D+ + L+P + S++++I
Sbjct: 31 QTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFS 90
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ F L F QML + P + S + ACA L+ L +Q+HG +GFD + F
Sbjct: 91 KFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSF 150
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSL+ MY KC IR A +FD+M D+VSW+A++ A G +A LF +M G
Sbjct: 151 VQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSG 210
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
V+PN +++ ++ +H+GL +A F M
Sbjct: 211 VQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +LV WN VI G A +G +EA+ I M KPD + + VL + +G
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506
Query: 61 K-EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ + ++G++A V + ++ + ++ ++E ++ + +PV DA W ++++ C
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/546 (42%), Positives = 345/546 (63%), Gaps = 35/546 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++VSWN ++ G R+G ++EA+ + +++ ++ PD T+SSVLP D + G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA---------------- 107
HGY I+ GL + C+ S++I+MY K V LF + +A
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 108 -------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+SW SIIAGC QNG E L+ FR+M +A +KP HV+ S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PAC ++ L G+ HG +R DN+ + S+L+DMYAKCG I L++ +F+ M ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
V W +++ G ++HG A + +S+FE + + +KP+ ++F ++L+AC GL D+ W YF
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M+++YGI P EHY+ + +LLGRAGKLQEAY+ I M P VW LL++CR+ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
LA AEK+F ++P N G YV+LSN YAA W + S+R M + G+KK P CSWI+VK
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
N+ Y +AGDKSHP +I E + E+ + M + G+ P+ LHDVEE++++ +L+ HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LA+VFG++ TPDGT +++IKNLR+CGDCH IKFIS REI +RD +RFHHF+DG C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 509 SCGDYW 514
SCGD+W
Sbjct: 755 SCGDFW 760
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 184/410 (44%), Gaps = 76/410 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + S++++I L + L+ +++ + +M + L PDS L ++ + A+ G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
K+IH + GLD + + S+ +MY +C R+ D+ ++F + KD
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 108 ----------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
+SWN I++G ++G E + F+++ P V+
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++P+ L++G+ +HG +I+ G + + S+++DMY K G++ +F++ ++
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 206 HD-----------------------------------IVSWTAVIMGNALHGNAHDAISL 230
+ +VSWT++I G A +G +A+ L
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M+ GVKPN V ++L AC + + S + + + + +A+ D+
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYA 434
Query: 291 RAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
+ G++ + + + NM PT+N+ W +L++ +H + + E +
Sbjct: 435 KCGRINLS-QIVFNMM--PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K + H ++ G + I + LI Y+ D+ + +P S++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ LF + + F +M + P ++ CA L+ +GKQ+H +G D + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+ MY +CG + AR +FD+M D+V+ +A++ A G + + + +ME G
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
++ N V++ +L+ + +G +A F +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV WN+++ G + +G +E ++I + LKPD + +S+L +G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC- 117
K + +G+ + S ++N+ + ++++++ L +P + D+ W +++ C
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 118 VQNGL 122
+QN +
Sbjct: 569 LQNNV 573
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 344/514 (66%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V +V+W ++I AR GL +EA+ + +M + PD FT+++VL A + G
Sbjct: 59 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + + +N+ + ++L++MYAKC +ED++ +F +PVKD ISWN++I G +N
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L F M++ ++KP + + I+PACA L +L GK++HG I+RNGF + +A
Sbjct: 179 SLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG LAR +FD + D+++WT +I G +HG ++AI+ F +M + G++
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+D+ W +FN M + + P EHYA + DLL R+GKL AY+
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P +W LLS CR+H +V+LA KVAE +F ++P N G YV+L+NTYA A +
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ LR + +G+KK P CSWIEVK+K + F+AG+ SHP +I LK L +M++
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 477
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY P T+ L + + QK+ L HSE+LA+ FGI+ P TIR+ KNLRVCGDCH
Sbjct: 478 EGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEM 537
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK + REI++RD++RFHHF+DG C C +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
+ S+L A+ DV G+ +HG ++ + ++L++MYAKC ++ + +F L+
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ 163
V+ ++W S+IA + GL DE ++ F +M + P + ++++ ACA +L GK
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
+H I N N+F+ ++L+DMYAKCG++ A +F +M + DI+SW +I G + +
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
++A+SLF M + +KP+ +L AC+ +D+
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRG 218
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
SI+ ACA+ + LG+ +HG ++ ++LLDMYAKCG + A +FD M +
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
+V+WT++I A G + +AI LF +M+++GV P+ VL AC+ G ++
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
N + ++ + + A+ D+ + G +++A M P +++ W T++
Sbjct: 123 NYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM---PVKDIISWNTMIGG 174
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/545 (44%), Positives = 334/545 (61%), Gaps = 32/545 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV + SW +I G +N EAL ++ ++ P + +S L A+ DV G
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH AI+ G N + + LI+MYAKC VED +F + VKD +SWNS+I+G +N
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSEN 634
Query: 121 GLFDEG-------------------------------LKFFRQMLIAKIKPRHVSFSSIM 149
+ D+ L F ML IKP ++ +S++
Sbjct: 635 YMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLL 694
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC +L + LG+Q H I + GFD +F+ +SL+ MY KCG C+F++M HD++
Sbjct: 695 SACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLI 753
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+W AV++G A +G +AI +FEQME +G+ P+ ++F+ VL ACSHAGL+D+ W++FNSM
Sbjct: 754 TWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSM 813
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
T+ YGI P HY + DLLGRAG L EA I NM P +W LL ACR+H+NVEL
Sbjct: 814 TQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVEL 873
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
+VAE++F + YV+LSN +A+ W A +R M+++G+ K P SWI+VKN
Sbjct: 874 GQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKN 933
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + FV GD++H I ALKE GY+PDT VLHDVEEEQK+N L YHSE+
Sbjct: 934 KLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEK 993
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+VFGI+ TP+G+ I+IIKNLR+CGDCHT +KF+SK+ R+II+RD +RFHHF DG CS
Sbjct: 994 LAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCS 1053
Query: 510 CGDYW 514
CGDYW
Sbjct: 1054 CGDYW 1058
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 39/290 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + SW T+I A+ G ++A+ + ++ + T ++++ +A + K
Sbjct: 422 MPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKA 477
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I L+ NV +++I Y + ++++ LF +PVK++ SW ++IAG VQN
Sbjct: 478 RLI----FDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQN 533
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ ++ + P SF+S + ACA++ + +G+ +H I+ G N ++
Sbjct: 534 EESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVM 593
Query: 181 SSLLDMYAKCGN----------IRL---------------------ARCIFDKMDLHDIV 209
+ L+ MYAKCGN IR+ AR +F+KM D+V
Sbjct: 594 NGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVV 653
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
SWTA+I G+ A+ LF M G+KPN + ++L+AC + G I
Sbjct: 654 SWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAI 703
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 183/429 (42%), Gaps = 69/429 (16%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE-- 62
D+VSWN++I G ++NG +EA + N++ T + +L +A + + +E
Sbjct: 201 DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTILLTGYAKEGRIEEAREVF 256
Query: 63 --------------IHGYAIRHGL-----------DANVCIGSSLINMYAKCARVEDSHR 97
I GY L + NV +S++ Y C R+ ++
Sbjct: 257 ESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARE 316
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +P ++++SW +I+G V + E F +M +P F ++ A L
Sbjct: 317 LFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDD 376
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L L L I+ G++ ++ + S++L+ Y + G++ LA F+ M + SWT +I
Sbjct: 377 LELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAA 436
Query: 218 NALHGNAHDAISLFEQMEKDGV---------------------------KPNSVAFVAVL 250
A G DAI L+E++ + V PN VA+ A++
Sbjct: 437 FAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAII 496
Query: 251 TACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG-- 308
+ G++ +A F M + +AA+ + + +EA E + +H
Sbjct: 497 AGYTQNGMLKEAKDLFQKMP-----VKNSASWAAMIAGFVQNEESREALELLIELHRSGS 551
Query: 309 -PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI--LSNTYAAARRWKDAA 365
P+++ + + LSAC +VE+ G+V + + +YV+ L + YA +D +
Sbjct: 552 VPSDSSFTSALSACANIGDVEI-GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 610
Query: 366 SLRVFMRNK 374
+ +R K
Sbjct: 611 HVFRTIRVK 619
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 127/260 (48%), Gaps = 8/260 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW +I G Y EA ++ +M +PD VL D+
Sbjct: 321 MPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELI 380
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ AI+ G + +V +GS+++N Y + ++ + F +P ++ SW ++IA Q
Sbjct: 381 GSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQC 440
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D+ ++ + ++ + + +++M A A + + + + I+ + N+
Sbjct: 441 GRLDDAIQLYERVPEQTVATK----TAMMTAYAQVGRIQKARLIFDEIL----NPNVVAW 492
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++ Y + G ++ A+ +F KM + + SW A+I G + + +A+ L ++ + G
Sbjct: 493 NAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV 552
Query: 241 PNSVAFVAVLTACSHAGLID 260
P+ +F + L+AC++ G ++
Sbjct: 553 PSDSSFTSALSACANIGDVE 572
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F ++ + + G + AR +F++M D+VSW ++I G + +G +A LF+
Sbjct: 170 HLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF- 228
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
V N + +LT + G I++A F SMT+ ++ + A+ + G L
Sbjct: 229 ---VGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVS-----WNAMISGYVQNGDL 280
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSA-CRVHKNVELAGKVAEKIF--MIDPNNMGAYVI 350
+ A + M P +NV W ++++ C ++ E A ++F M + N++ V+
Sbjct: 281 KNARKLFDEM---PEKNVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVM 332
Query: 351 LSNTYAAARRWK 362
+S + W+
Sbjct: 333 ISGYVHISDYWE 344
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/398 (58%), Positives = 300/398 (75%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWNT+++G A G + EAL +VR+M +PDSFTLSSVLPIFA+ DV +G E+H
Sbjct: 135 DVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVH 194
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+A+R+G D +V +GSSLI+MYA C R + S ++F LPV+D I WNS++AGC QNG +
Sbjct: 195 GFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVE 254
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+ML ++P V+FSS++P C +L +L GKQLH +IR GF+DN+FI+SSL+
Sbjct: 255 EALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLI 314
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG I +A IFD+M D+VSWTA+IMG ALHG A +A+ LFE+ME KPN +
Sbjct: 315 DMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 374
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+AVLTACSHAGL+DK W YF SM+ YGI P+ EH AA+AD+LGRAG+L EAY FIS
Sbjct: 375 TFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISK 434
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT +VW TLL ACRVHKN LA +VA+KI ++P ++G++V+LSN Y+A+ RW +A
Sbjct: 435 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 494
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHP 402
A LR MR KGMKK PACSWIEVKNK + FVA D+SHP
Sbjct: 495 AHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSHP 532
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D + WN+V+ G A+NG EEAL I R+M ++P T SS++P+ + + G
Sbjct: 232 LPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFG 291
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y IR G + NV I SSLI+MY KC + +H +F + D +SW ++I G +
Sbjct: 292 KQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALH 351
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
G E L F +M + KP H++F +++ AC+H + G K G +
Sbjct: 352 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEH 411
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L D+ + G + A KM + S W+ ++ +H N A + +++ +
Sbjct: 412 CAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME-- 469
Query: 239 VKPNSVAFVAVLT 251
++P S+ VL+
Sbjct: 470 LEPRSIGSHVVLS 482
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 170/378 (44%), Gaps = 33/378 (8%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSF--TLSSVLPIFADYVDVIK 59
P +SW I A G + +A+++ +M S +L + L A
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSAL 69
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK-------------------CARVEDSHRLFC 100
G +H AIR G A+ ++L+N+Y K +E ++F
Sbjct: 70 GASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFD 129
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
+ +D +SWN+++ GC + G E L R+M +P + SS++P A +
Sbjct: 130 EMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKR 189
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
G ++HG +RNGFD+++F+ SSL+DMYA C + +FD + + D + W +V+ G A
Sbjct: 190 GSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQ 249
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
+G+ +A+ +F +M + GV+P V F +++ C + + F Y I FE
Sbjct: 250 NGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLR-----FGKQLHAYVIRGGFE 304
Query: 281 H----YAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEK 336
+++ D+ + G++ A+ M P W ++ +H A + E+
Sbjct: 305 DNVFISSSLIDMYCKCGEISIAHHIFDRM-CSPDVVSWTAMIMGYALHGPAREALVLFER 363
Query: 337 IFM--IDPNNMGAYVILS 352
+ + PN++ +L+
Sbjct: 364 MELGNAKPNHITFLAVLT 381
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/515 (44%), Positives = 351/515 (68%), Gaps = 5/515 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD-----YVDVIK 59
DL+SWN++I A++ L EE++N+ + + LKPD FTL+S+ A V + +
Sbjct: 351 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQ 410
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+IH +AI+ G D+++ + S +++MY KC + ++ +F + D ++W S+I+GCV
Sbjct: 411 GKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 470
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG D+ L+ + +M +++ P +F++++ A + +T L G+QLH +I+ + F+
Sbjct: 471 NGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFV 530
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCGNI A +F KM++ +I W A+++G A HGNA +A++LF+ M+ G+
Sbjct: 531 GTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGI 590
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V+F+ +L+ACSHAGL +A+ Y +SM DYGI P EHY+ + D LGRAG +QEA
Sbjct: 591 EPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEAD 650
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I M + ++ LL ACR+ +VE +VA ++F ++P + AYV+LSN YAAA
Sbjct: 651 KVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAAN 710
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D R M+ K +KK P SWI+VKN + FV D+SHP I + ++E+++ +
Sbjct: 711 RWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIR 770
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GYVPDT+ VL DVE+E+K+ LYYHSE+LAI +G+I TP TTIR+IKNLRVCGDCH
Sbjct: 771 EDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHN 830
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+ISK+ +REI++RD +RFHHF DG CSCGDYW
Sbjct: 831 AIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 188/361 (52%), Gaps = 11/361 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP--IFADYVDVI 58
M D+V WN ++ G + GL +EA + + L+PD F++ +L ++A D+
Sbjct: 244 MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLE 303
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
GK++HG A++ GLD++V + +SL+NMY+K + +F + D ISWNS+I+ C
Sbjct: 304 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM-----PACAHLTTLHLGKQLHGCIIRNGF 173
Q+ L +E + F +L +KP H + +SI AC L L GKQ+H I+ GF
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
D ++ + S +LDMY KCG++ A +F+ + D V+WT++I G +GN A+ ++ +
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M + V P+ F ++ A S +++ ++ K ++ F + V D+ + G
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLV-DMYAKCG 542
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV--AEKIFMIDPNNMGAYVIL 351
+++AY M+ +W +L H N E A + + K I+P+ + IL
Sbjct: 543 NIEDAYRLFKKMNVRNIA-LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 601
Query: 352 S 352
S
Sbjct: 602 S 602
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 14/348 (4%)
Query: 2 PVSDLVSWNTVIVGLA-----RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
P DLV+WN ++ A +G +E L++ R + TL+ VL + +
Sbjct: 139 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 198
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ + +HGYAI+ GL+ +V + +L+N+Y+KC R+ D+ LF + +D + WN ++ G
Sbjct: 199 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 258
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC--AHLTTLHLGKQLHGCIIRNGFD 174
VQ GL E + F + + ++P S I+ C A L LGKQ+HG +++G D
Sbjct: 259 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLD 318
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++ +A+SL++MY+K G AR +F+ M D++SW ++I A ++++LF +
Sbjct: 319 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 378
Query: 235 EKDGVKPN-----SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
+G+KP+ S+ AC L+D+ K G + + D+
Sbjct: 379 LHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMY 437
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ G + A + N + P + W +++S C + N + A ++ ++
Sbjct: 438 IKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 484
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 108/210 (51%), Gaps = 5/210 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+++ GK H + G + + ++L+ MY+KC + + ++F P +D ++WN+I+
Sbjct: 92 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151
Query: 116 GCV-----QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+G EGL FR + + ++ + ++ C + L + +HG I+
Sbjct: 152 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 211
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G + ++F++ +L+++Y+KCG +R AR +FD M D+V W ++ G G +A L
Sbjct: 212 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 271
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
F + + G++P+ + +L C AG D
Sbjct: 272 FSEFHRSGLRPDEFSVQLILNGCLWAGTDD 301
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++ WN ++VGLA++G EEA+N+ + M + ++PD + +L + +
Sbjct: 554 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 613
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN-SIIAGCV 118
E +H +G++ + S L++ + V+++ ++ +P K + S N +++ C
Sbjct: 614 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 673
Query: 119 QNGLFDEG 126
G + G
Sbjct: 674 IQGDVETG 681
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/510 (44%), Positives = 334/510 (65%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++WN ++ G + G + AL ++M ++ + P++ T+S L ++ GKEIH
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIH 522
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY +R+ ++ + +GS+LI+MY+ C +E + +F L +D + WNSII+ C Q+G
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L R+M ++ ++ V+ S +PAC+ L L GK++H IIR G D FI +SL+
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY +CG+I+ +R IFD M D+VSW +I +HG DA++LF+Q G+KPN +
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHI 702
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +L+ACSH+GLI++ W YF M +Y + P+ E YA + DLL RAG+ E EFI
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEK 762
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW +LL ACR+H N +LA A +F ++P + G YV+++N Y+AA RW+DA
Sbjct: 763 MPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDA 822
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M+ +G+ K P CSWIEVK K ++FV GD SHP +I+ ++ L +++ GYV
Sbjct: 823 AKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYV 882
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT VL DV+E++K+ L HSE++A+ FG+I T GT +RIIKNLRVCGDCH+A KFI
Sbjct: 883 PDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFI 942
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ +R+II+RDN RFHHF DG CSCGDYW
Sbjct: 943 SKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 176/358 (49%), Gaps = 42/358 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +I G +NG EAL++ R+M +KP+S T++S + + + G+EIH
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 65 GYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
GY I+ LD+++ +G+SL++ YAKC VE + R F ++ D +SWN+++AG G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 124 DE-----------------------------------GLKFFRQMLIAKIKPRHVSFSSI 148
+E L+FF++M + P + S
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC + L LGK++HG ++RN + + + S+L+ MY+ C ++ +A +F ++ D+
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
V W ++I A G + +A+ L +M V+ N+V V+ L ACS + +
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 625
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ + G+ ++ D+ GR G +Q++ M P ++ W ++S +H
Sbjct: 626 IIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM---PQRDLVSWNVMISVYGMH 679
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 184/416 (44%), Gaps = 76/416 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++ SW ++ G YEE + + M N ++PD F V ++ + G
Sbjct: 150 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--------------------- 99
K+++ Y + G + N C+ S+++M+ KC R++ + R F
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269
Query: 100 --------CLLPVK------DAISWNSIIAGCVQNGLFDEGLKFF--------------- 130
C+ +K D ++WN+II+G Q+G F+E K+F
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVS 329
Query: 131 ---------------------RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CI 168
R+M++ +KP ++ +S + AC +L+ L G+++HG CI
Sbjct: 330 WTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 389
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
D ++ + +SL+D YAKC ++ +AR F + D+VSW A++ G AL G+ +AI
Sbjct: 390 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAI 449
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
L +M+ G++P+ + + ++T + G A +F M G+ P+ +
Sbjct: 450 ELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNTTTISGALAA 508
Query: 289 LGRAGKL---QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID 341
G+ L +E + ++ H + V L+S ++E+A V ++ D
Sbjct: 509 CGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 189/420 (45%), Gaps = 33/420 (7%)
Query: 18 RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVC 77
RNG+ A ++ M N +S+L ++ G ++H + +G+D
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+GS L+ +Y + VED+ R+F + ++ SW +I+ G ++E +K F M+
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
++P H F + AC+ L +GK ++ ++ GF+ N + S+LDM+ KCG + +AR
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
F++++ D+ W ++ G G A+ M+ GVKP+ V + A+++ + +G
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF--ISNMHAGPTENV-- 313
++A YF M P+ + A+ AG Q Y+F +S E V
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALI-----AGSEQNGYDFEALSVFRKMVLEGVKP 360
Query: 314 -WLTLLSACRVHKNVELAGKVAE-KIFMIDPNNMGAYVILSNT----YAAARRWKDAASL 367
+T+ SA N+ L E + I + + +++ N+ YA R S+
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR------SV 414
Query: 368 RVFMRNKGM-KKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
V R GM K+T SW N A A SH E ELL M+ +G PD
Sbjct: 415 EVARRKFGMIKQTDLVSW----NAMLAGYALRGSH-------EEAIELLSEMKFQGIEPD 463
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWN +I +G +A+N+ +Q + LKP+ T +++L + + +G
Sbjct: 661 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 720
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
K + +D V + ++++ ++ + ++ +P + +A W S++ C
Sbjct: 721 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 334/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++V+W +I G A+ G + AL ++ +M + P+ T +S+L + + G
Sbjct: 258 LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHG 317
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y I+ G + + ++LI MY KC ++++ +LF LP +D ++W +++ G Q
Sbjct: 318 KKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQL 377
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE + FR+M IKP ++F+S + +C+ L GK +H ++ G+ ++++
Sbjct: 378 GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ 437
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ MYAKCG++ AR +F++M ++V+WTA+I G A HG +A+ FEQM+K G+K
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F +VL+AC+H GL+++ +F SM DYGI P EHY+ DLLGRAG L+EA
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 557
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P +VW LLSACR+H +VE + AE + +DP++ GAYV LSN YAAA R
Sbjct: 558 VILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGR 617
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
++DA +R M + + K P SWIEV K + F DKSHP I L +L E++++
Sbjct: 618 YEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKE 677
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GYVPDT+ VLHDV+EEQK L HSERLAI +G++ TP GT IRI+KNLRVCGDCHTA
Sbjct: 678 QGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTA 737
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+V REII RD RFHHF DG CSCGD+W
Sbjct: 738 SKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 175/350 (50%), Gaps = 4/350 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +I EA M KPD T S+L F + + G+++H
Sbjct: 161 NIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVH 220
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ GL+ +G+SL+ MYAKC + + +F LP K+ ++W +IAG Q G D
Sbjct: 221 MEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVD 280
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ +M A++ P ++++SI+ C L GK++H II++G+ +++ ++L+
Sbjct: 281 VALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALI 340
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY KCG ++ AR +F + D+V+WTA++ G A G +AI LF +M++ G+KP+ +
Sbjct: 341 TMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKM 400
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F + LT+CS + + S + G + +A+ + + G + +A + N
Sbjct: 401 TFTSALTSCSSPAFLQEGKSIHQQLVH-AGYSLDVYLQSALVSMYAKCGSMDDA-RLVFN 458
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ W +++ C H A + E++ I P+ + +LS
Sbjct: 459 QMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLS 508
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 130/239 (54%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
L + G +EAL I+ M + S +L A + +G+E+H ++ G+ N
Sbjct: 71 LCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 130
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
+ ++L++MYAKC + D+ R+F + ++ +SW ++I V E K + M +
Sbjct: 131 RYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A KP V+F S++ A + L +G+++H I + G + + +SL+ MYAKCG+I
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISK 250
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A+ IFDK+ ++V+WT +I G A G A+ L E+M++ V PN + + ++L C+
Sbjct: 251 AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
D ++ + ++ + G E L M++ + F ++ CA L +L G+++H
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
I+++G N ++ ++LL MYAKCG++ AR +FD + +IVSWTA+I
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A +E M+ G KP+ V FV++L A ++ L+ + K G+ ++
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAK-AGLELEPRVGTSL 238
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--ID 341
+ + G + +A + P +NV W L++ V++A ++ EK+ +
Sbjct: 239 VGMYAKCGDISKAQVIFDKL---PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA 295
Query: 342 PNNMGAYVILSN 353
PN + IL
Sbjct: 296 PNKITYTSILQG 307
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/515 (44%), Positives = 337/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++V+W +I G A+ G + AL ++ M + P+ T +S+L + G
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHG 268
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y I+ G + + +SLI MY KC +E++ +LF LP +D ++W +++ G Q
Sbjct: 269 KKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQL 328
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE + FR+M IKP ++F+S++ +C+ L GK++H ++ G++ ++++
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN-ALHGNAHDAISLFEQMEKDGV 239
S+L+ MYAKCG++ A +F++M ++V+WTA+I G A HG +A+ F+QM+K G+
Sbjct: 389 SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V F +VL+AC+H GL+++ +F SM DYGI P EHY+ DLLGRAG L+EA
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M P +VW LLSACRVH +VE + AE + +DP++ GAYV LS+ YAAA
Sbjct: 509 NVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAG 568
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R++DA +R M + + K P SWIEV K + F DKSHP +I L +L E+++
Sbjct: 569 RYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIK 628
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPDT+ VLHDV+EEQK+ +L+ HSERLAI +G++ TP G IRI+KNLRVCGDCHT
Sbjct: 629 EMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHT 688
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFISK+V REII RD RFHHF DG CSCGD+W
Sbjct: 689 ATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
L + G +EAL I+ M + S +L A + +G+E+H ++ G+ N
Sbjct: 22 LCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 81
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
+ ++L++MYAKC + D+ R+F + ++ +SW ++I V E K + M +
Sbjct: 82 RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A KP V+F S++ A + L LG+++H I+ G + + +SL+ MYAKCG+I
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISK 201
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
AR IFD++ ++V+WT +I G A G A+ L E M++ V PN + F ++L C+
Sbjct: 202 ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++ + + G ++ + + G L+EA + S++
Sbjct: 262 PAALEHGKKVHRYIIQS-GYGRELWVVNSLITMYCKCGGLEEARKLFSDL 310
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 144/334 (43%), Gaps = 34/334 (10%)
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G E L M++ + F ++ CA L +L G+++H I+++G N +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++LL MYAKCG++ AR +FD + +IVSWTA+I +A +E M+ G
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP+ V FV++L A ++ L+ + + G+ ++ + + G + +A
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIV-EAGLELEPRVGTSLVGMYAKCGDISKA 202
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS-- 352
+ P +NV W L++ V++A ++ E + + PN + IL
Sbjct: 203 RVIFDRL---PEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGC 259
Query: 353 NTYAAARRWK--------DAASLRVFMRNKGMKKTPACSWIEVKNKAY------------ 392
T AA K +++ N + C +E K +
Sbjct: 260 TTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWT 319
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
A V G F+ +EA+ L RM+Q+G PD
Sbjct: 320 AMVTGYAQLGFH---DEAIN-LFRRMQQQGIKPD 349
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/510 (44%), Positives = 343/510 (67%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL SWN ++ G +G + +AL + M + D TL + V + +GK+IH
Sbjct: 1102 DLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIH 1161
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G + ++ + S +++MY KC +E + R+F +P D ++W ++I+GCV+NG +
Sbjct: 1162 AVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEE 1221
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L + QM ++K++P +F++++ AC+ LT L G+Q+H I++ + F+ +SL+
Sbjct: 1222 HALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLV 1281
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI AR +F + + I SW A+I+G A HGNA +A+ F+ M+ GV P+ V
Sbjct: 1282 DMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRV 1341
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL+ +A+ F SM K+YGI P EHY+ + D L RAG+++EA + IS+
Sbjct: 1342 TFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISS 1401
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ TLL+ACRV + E +VAEK+ ++P++ AYV+LSN YAAA +W++
Sbjct: 1402 MPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENV 1461
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS R MR +KK P SW+++KNK + FVAGD+SH I ++ +++R+ +EGYV
Sbjct: 1462 ASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYV 1521
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT L DVEEE K+ LYYHSE+LAI +G++ TP TT+R+IKNLRVCGDCH+AIK+I
Sbjct: 1522 PDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYI 1581
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ +REI++RD +RFHHF +G CSCGDYW
Sbjct: 1582 SKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 159/320 (49%), Gaps = 5/320 (1%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
SD++ WN + + G EA++ M N + D T +L + A + GK+I
Sbjct: 898 SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQI 957
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG +R GLD V +G+ LINMY K V + +F + D ISWN++I+GC +GL
Sbjct: 958 HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLE 1017
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + F +L + P + +S++ AC+ L +L Q+H C ++ G + F++++
Sbjct: 1018 ECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+D+Y+K G + A +F D D+ SW A++ G + G+ A+ L+ M++ G + +
Sbjct: 1078 LIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137
Query: 243 SVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V A GL+ K +++ G + V D+ + G+++ A
Sbjct: 1138 QITLVNAAKAA--GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRV 1195
Query: 302 ISNMHAGPTENVWLTLLSAC 321
S + P + W T++S C
Sbjct: 1196 FSEI-PSPDDVAWTTMISGC 1214
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 158/297 (53%), Gaps = 6/297 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD-VIKGKEI 63
DL+SWNT+I G +GL E ++ + + +L PD FT++SVL + +I
Sbjct: 1000 DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQI 1059
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A++ G+ + + ++LI++Y+K ++E++ LF D SWN+I+ G + +G F
Sbjct: 1060 HACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDF 1119
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L+ + M + + ++ + A L L GKQ+H +++ GF+ ++F+ S +
Sbjct: 1120 PKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGV 1179
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
LDMY KCG + AR +F ++ D V+WT +I G +G A+ + QM V+P+
Sbjct: 1180 LDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDE 1239
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEA 298
F ++ ACS +++ ++ K + +F+ + ++ D+ + G +++A
Sbjct: 1240 YTFATLVKACSLLTALEQGRQIHANIVK---LNCAFDPFVMTSLVDMYAKCGNIEDA 1293
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 1/204 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V+W T+I G NG E AL QM ++PD +T ++++ + + +G
Sbjct: 1199 IPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQG 1258
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH ++ + + +SL++MYAKC +ED+ LF + SWN++I G Q+
Sbjct: 1259 RQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQH 1318
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+FF+ M + P V+F ++ AC+H + + + +N G + +
Sbjct: 1319 GNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEH 1378
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM 203
S L+D ++ G I A + M
Sbjct: 1379 YSCLVDALSRAGRIEEAEKVISSM 1402
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 3/194 (1%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
D+ GK H + G + + ++LI MYAKC + + +LF P +D ++WN+I
Sbjct: 671 DLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAI 730
Query: 114 IAGCVQNG-LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++ + +G FR + + + + + + C + + LHG ++ G
Sbjct: 731 LSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIG 790
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
++F+A +L+++YAK G IR AR +FD M + D+V W ++ ++A+ LF
Sbjct: 791 LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFS 850
Query: 233 QMEKDGVKPNSVAF 246
+ + G +P+ V
Sbjct: 851 EFHRTGFRPDDVTL 864
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 32/256 (12%)
Query: 5 DLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
DLV+WN ++ LA + + ++ R + + TL+ V + + +
Sbjct: 723 DLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESL 782
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HGYA++ GL +V + +L+N+YAK + ++ LF + V+D + WN ++ V L
Sbjct: 783 HGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLE 842
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SS 182
E + F + +P V+ ++ ++ C +N + F A ++
Sbjct: 843 YEAMLLFSEFHRTGFRPDDVTLRTL-------------SRVVKC-KKNILELKQFKAYAT 888
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L MY G+ D++ W + G A +A+ F M V +
Sbjct: 889 KLFMYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACD 934
Query: 243 SVAFVAVLTACSHAGL 258
+ FV +LT AGL
Sbjct: 935 GLTFVVMLTVV--AGL 948
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM--D 204
SI+ + L LGK+ H I+ +G + F+ ++L+ MYAKCG++ AR +FD
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 205 LHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
D+V+W A++ A H + +HD LF + + V V C
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMC 770
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/514 (44%), Positives = 337/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN +I G A NG YE A+ + QM + L PD+FT VL A + G
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIH + ++ G + +V +G++LI+MYAKC V + +F + V+DA+ WNS++A QN
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D L +M++ ++P + + + A A L G++LHG R F+ + +
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK 315
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++R+AR +F+++ + +VSW A+I G A+HG+A +A+ LFE+M + K
Sbjct: 316 TALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-K 374
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FV VL+ACSH GL+++ W +F +M +DY I P+ +HY + DLLG +G+L EAY
Sbjct: 375 PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYN 434
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P VW LL++C++H NVEL E++ ++P++ G YVILSN YA A +
Sbjct: 435 LIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGK 494
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ A LR M ++ +KK+ ACSWIEVKNK +AF++GD SHP I L+ + M++
Sbjct: 495 WEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKE 554
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T V HDVE+++K N++ HSERLAI FG+I TP GT + I KNLR+C DCH A
Sbjct: 555 AGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVA 614
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFISKI +REI VRD +R+HHF+DG CSCGDYW
Sbjct: 615 IKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 117/218 (53%), Gaps = 10/218 (4%)
Query: 45 SSVLPIFADYVDVIK----------GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
+ + P +++Y +++ GK++H G + I + L+N+Y C +
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ LF +P + WN +I G NG ++ ++ + QM + P + +F ++ ACA
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L+ + G+++H +++ G++ ++F+ ++L+DMYAKCG + AR +FDK+ + D V W ++
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ + +G+ +SL +M G++P V ++A
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISA 286
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%)
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ P + +++S++ +C + GKQLH + GF + IA+ L+++Y C ++ AR
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+FD++ H+I W +I G A +G A+ L+ QM G+ P++ F VL AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 258 LID 260
I+
Sbjct: 191 AIE 193
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/515 (46%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
MP D SW +I G R+ EAL + R M N K + FT+SS L A +
Sbjct: 162 MPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRI 221
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHGY +R GLD++ + S+L +MY KC +E++ +F + +D ++W ++I Q
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G EG F +L + I+P +FS ++ ACA+ T+ LGK++HG + R GFD F
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFA 341
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+ MY+KCGN+ A +F + D+ SWT++I G A +G +AI FE + K G
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + FV VL+AC+HAGL+DK YF+S+ + YG+ + +HYA + DLL R+G+ EA
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
IS M P + +W +LL CR+H N++LA + AE +F I+P N YV L+N YA A
Sbjct: 462 NIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAG 521
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W + A +R M ++G+ K P SWI +K + F+ GD SHP INE L +L +RM+
Sbjct: 522 MWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMK 581
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EG+VPDT VLHDVE+EQK+ L YHSE+LA+ FGII TP+GT I++ KNLR C DCHT
Sbjct: 582 EEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHT 641
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFISKI R+IIVRD++RFH FEDG CSC DYW
Sbjct: 642 AIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 38/337 (11%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
L + +EAL I+ Q+ KP + S+++ + +GK++H + G
Sbjct: 49 LCQQNRLKEALQILHQID----KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPG 104
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF------------ 123
+ I + L+ MYAKC + DS +LF +P +D SWN +I+G + GL
Sbjct: 105 LFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPE 164
Query: 124 -------------------DEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQ 163
+E L+ FR M + K + SS + A A + L +GK+
Sbjct: 165 RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKE 224
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
+HG I+R G D + + S+L DMY KCG+I AR IFDKM DIV+WTA+I G
Sbjct: 225 IHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA 283
+ LF + + G++PN F VL AC++ + MT+ G P +
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTR-VGFDPFSFAAS 343
Query: 284 AVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
A+ + + G + A E + P W +L++
Sbjct: 344 ALVHMYSKCGNMVSA-ERVFKETPQPDLFSWTSLIAG 379
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 332/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+VSWN +I G A+ G +EAL + M N+ P+ T+ SVL A + G
Sbjct: 221 MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG 280
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + GL +N+ + ++LI+MY+KC ++ + LF + +D ISWN +I G
Sbjct: 281 NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHM 340
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E L FR+ML + ++P ++F SI+P+CAHL + LGK +H I +N + ++
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLS 400
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D+YAKCGNI AR +FD M + + SW A+I G A+HG A A LF +M DG++
Sbjct: 401 TSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIE 460
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + FV +L+AC HAGL+D +F+SM +DY I+P +HY + DLLGRAG +EA
Sbjct: 461 PNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAES 520
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ NM P +W +LL ACR H VEL VAE++F ++P+N GAYV+LSN YA A +
Sbjct: 521 LLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGK 580
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A +R + ++GMKK P C+ IEV N + F+ GDK HP I L+E+ E+++
Sbjct: 581 WDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKV 640
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+V DT EVL+D++EE K+ L +HSE+LAI FG+I T GT IRIIKNLRVC +CH+A
Sbjct: 641 FGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSA 700
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKI REII RD +RFHHF+DG CSC DYW
Sbjct: 701 TKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 182/381 (47%), Gaps = 35/381 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L WN++I GL+ + AL +M ++P+S+T +L A +GK+IH
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------------- 96
+ ++ G ++V I +SLINMYA+ + ++
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 97 ---RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+LF +PVKD +SWN++IAG Q G E L F M A + P + S++ ACA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L LG + I G N+ + ++L+DMY+KCG+++ AR +FD M D++SW
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G + +A++LF +M GV+P + F+++L +C+H G ID + K++
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ + + DL + G + A + M + W ++ +H + A ++
Sbjct: 393 NSVSTSLSTSLI-DLYAKCGNIVAARQVFDGMKIKSLAS-WNAMICGLAMHGQADKAFEL 450
Query: 334 AEKIFM--IDPNNMGAYVILS 352
K+ I+PN + ILS
Sbjct: 451 FSKMSSDGIEPNEITFVGILS 471
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 34/278 (12%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K+IH + I+ GL + S LI A + + + LF + + WNS+I G
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ L FF +M+ + ++P +F ++ +CA L + H GKQ+H +++ GF ++F
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165
Query: 179 IASSLLDMYAKCG---NIRL----------------------------ARCIFDKMDLHD 207
I +SL++MYA+ G N +L AR +FD+M + D
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSW A+I G A G + +A+ LFE M K V PN V+VL+AC+ + +D S
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNS-MR 284
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
S +D G+ + + A+ D+ + G LQ A E +M
Sbjct: 285 SWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/543 (43%), Positives = 344/543 (63%), Gaps = 32/543 (5%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++ SWN+VI LAR+G EAL M ++LKP+ T + + +D+ G++
Sbjct: 39 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 98
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSH--------------------------- 96
H A+ G + ++ + S+L++MY+KC + D+
Sbjct: 99 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 97 ----RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPA 151
R+F + +D ISWNSIIA QNG+ E ++ F +M+ +I V+ S+++ A
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CAH + LGK +H +I+ G + N+F+ +S++DMY KCG + +AR FD+M ++ SW
Sbjct: 219 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 278
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+A++ G +HG+A +A+ +F +M GVKPN + FV+VL ACSHAGL+++ W +F +M+
Sbjct: 279 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 338
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
++ + P EHY + DLLGRAG L+EA++ I M P VW LL ACR+HKNV+L
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 398
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A K+F +DP N G YV+LSN YA A RW+D +R+ M+N G+ K P S +++K +
Sbjct: 399 ISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRV 458
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ GD+ HP + +I E L++L ++++ GYVPD VLHDV E+K+ +L HSE+LA
Sbjct: 459 HVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLA 518
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FGI+ T GTTI IIKNLRVCGDCHTAIKFISKIV REI+VRD+ RFHHF DG CSCG
Sbjct: 519 VAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCG 578
Query: 512 DYW 514
DYW
Sbjct: 579 DYW 581
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
M D++SWN++I A+NG+ E++ I +M G +N ++ TLS+VL A
Sbjct: 168 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY--NAVTLSAVLLACAHSGSQ 225
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
GK IH I+ GL++NV +G+S+I+MY KC +VE + + F + K+ SW++++AG
Sbjct: 226 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 285
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G E L+ F +M +A +KP +++F S++ AC+H L G + + FD
Sbjct: 286 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA-MSHEFDVEP 344
Query: 178 FIA--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ ++D+ + G ++ A + M L D V W A++ +H N
Sbjct: 345 GVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 393
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 199 IFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+F+K +D ++ SW +VI A G++ +A+ F M K +KPN F + +CS
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCS--A 88
Query: 258 LID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
L+D + + +G P +A+ D+ + G+L++A
Sbjct: 89 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDA 130
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 332/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D VSWN +I G A++G +EEAL ++M N+ P+ T+ +VL A + G
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + HGL +N+ + ++LI+MY+KC ++ + LF + KD ISWN +I G
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFI 179
+ E L FR+M + ++P V+F SI+PACA+L L LGK +H I + N +
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCGNI A+ +F M + SW A+I G A+HG+A+ A+ LF QM +G
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + FV VL+ACSHAGL++ F+SM +DY I+P +HY + DLLGRAG EA
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAE 523
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ NM P +W +LL ACRVH NVEL A+ +F ++P N GAYV+LSN YA A
Sbjct: 524 ALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAG 583
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D A +R + +KGMKK P CS IEV + + F+ GDK H I + L E+ + +E
Sbjct: 584 RWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLE 643
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ G+VPDT EVL+D++EE K+ L +HSE+LAI FG+I T TTIRI+KNLRVCG+CH+
Sbjct: 644 KAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHS 703
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKI REII RD +RFHHF+DG CSC DYW
Sbjct: 704 AIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 186/353 (52%), Gaps = 32/353 (9%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I G + + A++ +M ++P+S+T +L A +GK+IHG+ +
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVL 159
Query: 69 RHGLDANVCIGSSLINMYAKCARV-------------------------------EDSHR 97
+ GL+++ + +SLINMYA+ + +D+ R
Sbjct: 160 KLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARR 219
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +PV+DA+SWN++IAG Q+G F+E L FF++M A + P + +++ ACA +
Sbjct: 220 LFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGS 279
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L LG + I +G N+ + ++L+DMY+KCG++ AR +F+ + DI+SW +I G
Sbjct: 280 LELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGG 339
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
+ + +A++LF +M++ V+PN V FV++L AC++ G +D + K +
Sbjct: 340 YSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT 399
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ + ++ D+ + G ++ A + + M + W ++S +H + +A
Sbjct: 400 NTSLWTSLIDMYAKCGNIEAAKQVFAGMKP-KSLGSWNAMISGLAMHGHANMA 451
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 180/435 (41%), Gaps = 86/435 (19%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAISWNSIIAGCV 118
K+IH I+ GL S LI A S+ L ++ + WN++I G
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ + F+ +ML+ ++P +F ++ +CA + GKQ+HG +++ G + + F
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG---------------- 222
+ +SL++MYA+ G + A +F K L D VS+TA+I G L G
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228
Query: 223 ----NA-----------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
NA +A++ F++M++ V PN V VL+AC+ +G ++ ++
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG-NWVR 287
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM---------------------- 305
S +D+G+ + A+ D+ + G L +A + +
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347
Query: 306 ------------HAGPTENVWLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVIL 351
+ P + ++++L AC ++L + I + N + L
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
+ YA + A+ +VF GMK SW A ++G H N AL
Sbjct: 408 IDMYAKCGNIE--AAKQVF---AGMKPKSLGSW-------NAMISGLAMH---GHANMAL 452
Query: 412 KELLERMEQEGYVPD 426
EL +M EG+ PD
Sbjct: 453 -ELFRQMRDEGFEPD 466
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 339/514 (65%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++ W+ +I A++ EA+ + QM + P+ FT +SVL A ++ G
Sbjct: 203 MPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLG 262
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + ++ GLD NV + ++L+++YAKC R+++S +LF LP ++ ++WN++I G VQ+
Sbjct: 263 KQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQS 322
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D+ L ++ ML +++ V++SS++ ACA L + LG Q+H ++ +D ++ +
Sbjct: 323 GDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVG 382
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+I+ AR +FD + D +SW A+I G ++HG +A+ F+ M++
Sbjct: 383 NALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + FV++L+ACS+AGL+D +YF SM +DYGI P EHY + LLGR+G L +A +
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVK 502
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + P VW LL AC +H +V+L A++I IDP + +V+LSN YA RR
Sbjct: 503 LIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRR 562
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AS+R FM+NKG+KK P SWIE + + F GD SHP I+ L+ L + E+
Sbjct: 563 WNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEK 622
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD VL DVE+++KK L+ HSERLA+ FG+I TP IRI+KNLR+C DCH+A
Sbjct: 623 AGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSA 682
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIVQR+II+RD +RFHHF+DG CSCGDYW
Sbjct: 683 IKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 172/350 (49%), Gaps = 33/350 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++ A N ++++L + +M V P+ FT + VL GK +H
Sbjct: 106 DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVH 165
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ + ++ +G L+++Y K D R+F +P D I W+ +I+ Q+
Sbjct: 166 GCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSR 225
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F QM A + P +F+S++ +CA + L LGKQ+H +++ G D N+F++++L+
Sbjct: 226 EAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALM 285
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKCG + + +F ++ + V+W +I+G G+ A+SL++ M + V+ + V
Sbjct: 286 DVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEV 345
Query: 245 AFVAVLTAC---------------SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
+ +VL AC S + DK N++ Y S ++ V D+L
Sbjct: 346 TYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDML 405
Query: 290 ------------------GRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
G G+ +A++ + P + ++++LSAC
Sbjct: 406 SERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC 455
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 134/254 (52%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+ T+I G ++ +E +++ ++ + + F +++L +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + G ++N +G++LI+ YA C V + + F + KD +SW ++A +N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + L+ F +M + P H +F+ ++ AC L +GK +HGC+++ ++ ++++
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
LLD+Y K G+ +F++M HD++ W+ +I A + +A+ LF QM + V
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 241 PNSVAFVAVLTACS 254
PN F +VL +C+
Sbjct: 241 PNQFTFASVLQSCA 254
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 345/547 (63%), Gaps = 35/547 (6%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D+VSW ++ + G + +++ R+MG +KP+ T+SS+LP A+ D+ GKE
Sbjct: 227 VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE 286
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN----------- 111
IHG+A+RHG+ N+ + S+L+++YAKC V ++ +F L+P +D +SWN
Sbjct: 287 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 346
Query: 112 ------------------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
++I GC++NG +E ++ FR+M KP ++ SS
Sbjct: 347 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 406
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+PAC+ L +GK++H + R+ ++ ++LL MYAKCG++ L+R +FD M D
Sbjct: 407 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 466
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+V+W +I+ NA+HGN +A+ LF++M V+PNSV F VL+ CSH+ L+++ FN
Sbjct: 467 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 526
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SM +D+ + P HY+ V D+ RAG+L EAY+FI M PT + W LL+ACRV+KNV
Sbjct: 527 SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNV 586
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
ELA A+K+F I+PNN G YV L N A+ W +A+ +R+ M+ +G+ KTP CSW++V
Sbjct: 587 ELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQV 646
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
NK + FV GDKS+ +I L EL+E+M+ GY PDT VL D+++E+K L HS
Sbjct: 647 GNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHS 706
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LA+ FGI+ +TIR+ KNLR+CGDCH AIK++SK+V I+VRD+ RFHHF++G
Sbjct: 707 EKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGN 766
Query: 508 CSCGDYW 514
CSC D W
Sbjct: 767 CSCKDLW 773
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 155/278 (55%), Gaps = 1/278 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D + +T+I L +GL EA+ I + +KPD + A D ++
Sbjct: 124 IPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRV 183
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H A R G+ ++V +G++LI+ Y KC VE + R+F L V+D +SW S+ + V+
Sbjct: 184 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 243
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +G+ FR+M + +KP ++ SSI+PACA L L GK++HG +R+G N+F+
Sbjct: 244 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVC 303
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ +YAKC ++R AR +FD M D+VSW V+ + SLF +M +DGV+
Sbjct: 304 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 363
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ + AV+ C G ++A F M K G P+
Sbjct: 364 ADEATWNAVIGGCMENGRSEEAVEMFRKMQK-MGFKPN 400
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+G LI + + +LF +P D + +++I+ +GL +E +K + +
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
IKP F + ACA K++H R G ++F+ ++L+ Y KC + AR
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 219
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+FD + + D+VSWT++ G + +F +M GVKPN + ++L AC+
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAE 277
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ + G+ AR +FD + D + + +I HG +++AI ++ +++ G+KP+
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 243 SVAFVAVLTACSHAG 257
F+A AC+ +G
Sbjct: 164 MPVFLAAAKACAVSG 178
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/516 (43%), Positives = 346/516 (67%), Gaps = 3/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVI 58
M D+V+W +I G +++ ++AL ++ +M + LKP+ FTL+S+L + DV+
Sbjct: 76 MSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVL 135
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++HG +R+G D+NV + ++++MYA+C +E++ +F ++ K+ +SWN++IAG
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYA 195
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G D+ F ML +KP H ++SS++ ACA + +L GK +H +I+ G F
Sbjct: 196 RKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAF 255
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++LLDMYAK G+I A+ +FD++ D+VSW +++ G + HG A+ FE+M +
Sbjct: 256 VGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR 315
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ PN + F+ VLTACSHAGL+D+ YF+ M K Y + P HY + DLLGRAG L A
Sbjct: 316 IAPNDITFLCVLTACSHAGLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRA 374
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FIS M PT VW LL ACR+HKN+EL G AE IF +D + G +V+L N YA A
Sbjct: 375 IQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALA 434
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW DAA +R M+ G+KK PACSW+E++N+ + FVA D +HP I+ +++ +++
Sbjct: 435 GRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKI 494
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYVPD+ VL +++++++ L YHSE+LA+ F ++ TP G+TIRI KN+R+CGDCH
Sbjct: 495 KEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCH 554
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+A KF+SK+V+REIIVRD +RFHHF DG CSC DYW
Sbjct: 555 SAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 156/302 (51%), Gaps = 14/302 (4%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IH + ++ + ++L+N+YAKC + + +LF + +D ++W ++I G
Sbjct: 33 EGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYS 92
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCIIRNGFDDN 176
Q+ + L +ML +KP + +S++ A + + T + G+QLHG +R G+D N
Sbjct: 93 QHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSN 152
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++++ ++LDMYA+C ++ A+ IFD M + VSW A+I G A G A LF M +
Sbjct: 153 VYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLR 212
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+ VKP + +VL AC+ G +++ + +++ +G + D+ ++G ++
Sbjct: 213 ENVKPTHFTYSSVLCACASMGSLEQG-KWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIE 271
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF------MIDPNNMGAYVI 350
+A + + A W ++L+ H GKVA + F I PN++ +
Sbjct: 272 DAKKVFDRL-AKRDVVSWNSMLTGYSQHG----LGKVALQRFEEMLRTRIAPNDITFLCV 326
Query: 351 LS 352
L+
Sbjct: 327 LT 328
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ C HL L+ GK +H ++ + F D++ + ++LL++YAKCG++ AR +FD+M
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS-Y 265
D+V+WTA+I G + H DA+ L +M + G+KPN ++L A S G D
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ + YG + A+ D+ R L+EA + I ++ E W L++
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALIAG 193
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/545 (41%), Positives = 347/545 (63%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN ++ G R+G ++EA+ + ++M ++ PD T+SSVLP D ++ G++IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARV-------------------------------E 93
GY I+ GL + C+ S++++MY K V +
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335
Query: 94 DSHRLFCLLPVK----DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+ +F L + + +SW SIIAGC QNG E L+ FR+M +A +KP V+ S++
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSML 395
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
PAC ++ L G+ HG +R D++ + S+L+DMYAKCG I++++ +F+ M ++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLV 455
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
W +++ G ++HG A + +S+FE + + +KP+ ++F ++L+AC GL D+ W YFN M
Sbjct: 456 CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+++YGI P EHY+ + +LLGRAGKLQEAY+ I + P VW LL++CR+ NV+L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A A+K+F ++P N G YV++SN YAA W + S+R M + G+KK P CSWI+VKN
Sbjct: 576 AEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K Y +A DKSHP +I E + E+ E M + G+ P+ L DVEE++++ +L+ HSE+
Sbjct: 636 KVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEK 695
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+VFG++ TPDGT +++IKNLR+CGDCH IKFIS REI +RD +RFHHF+DG CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 510 CGDYW 514
CGD+W
Sbjct: 756 CGDFW 760
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 185/410 (45%), Gaps = 76/410 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + S++++I L + L+ +++ + +M + L PD+ L ++ + A+ G
Sbjct: 76 IPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAG 135
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
K+IH A GLD + + SL +MY +C R+ D+ ++F + KD
Sbjct: 136 KQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARK 195
Query: 108 ----------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
+SWN I++G ++G E + F++M P V+
Sbjct: 196 GCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTV 255
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++P+ L++G+Q+HG +I+ G + + S++LDMY K G++ +FD+ ++
Sbjct: 256 SSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEM 315
Query: 206 HD-----------------------------------IVSWTAVIMGNALHGNAHDAISL 230
+ +VSWT++I G A +G +A+ L
Sbjct: 316 METGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M+ GVKPN V ++L AC + + S + + + +A+ D+
Sbjct: 376 FREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDDVHVGSALIDMYA 434
Query: 291 RAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
+ G+++ + + + NM PT+N+ W +L++ +H + + E +
Sbjct: 435 KCGRIKMS-QIVFNMM--PTKNLVCWNSLMNGYSMHGKAKEVMSIFESLM 481
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K + H ++ G + I + LI Y+ D+ + +P S++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ LF + + F +M + P ++ CA L+ GKQ+H +G D + F
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SL MY +CG + AR +FD+M D+V+ +A++ G A G + + + +MEK G
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
++PN V++ +L+ + +G +A F M
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKM 243
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV WN+++ G + +G +E ++I + LKPD + +S+L +G
Sbjct: 449 MPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC- 117
K + + +G+ + S ++N+ + ++++++ L +P + D+ W +++ C
Sbjct: 509 WKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCR 568
Query: 118 VQNGL 122
+QN +
Sbjct: 569 LQNNV 573
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 345/547 (63%), Gaps = 35/547 (6%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D+VSW ++ + G + +++ R+MG +KP+ T+SS+LP A+ D+ GKE
Sbjct: 141 VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE 200
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN----------- 111
IHG+A+RHG+ N+ + S+L+++YAKC V ++ +F L+P +D +SWN
Sbjct: 201 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 260
Query: 112 ------------------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
++I GC++NG +E ++ FR+M KP ++ SS
Sbjct: 261 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 320
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+PAC+ L +GK++H + R+ ++ ++LL MYAKCG++ L+R +FD M D
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 380
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+V+W +I+ NA+HGN +A+ LF++M V+PNSV F VL+ CSH+ L+++ FN
Sbjct: 381 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 440
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SM +D+ + P HY+ V D+ RAG+L EAY+FI M PT + W LL+ACRV+KNV
Sbjct: 441 SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNV 500
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
ELA A+K+F I+PNN G YV L N A+ W +A+ +R+ M+ +G+ KTP CSW++V
Sbjct: 501 ELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQV 560
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
NK + FV GDKS+ +I L EL+E+M+ GY PDT VL D+++E+K L HS
Sbjct: 561 GNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHS 620
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LA+ FGI+ +TIR+ KNLR+CGDCH AIK++SK+V I+VRD+ RFHHF++G
Sbjct: 621 EKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGN 680
Query: 508 CSCGDYW 514
CSC D W
Sbjct: 681 CSCKDLW 687
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 155/278 (55%), Gaps = 1/278 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D + +T+I L +GL EA+ I + +KPD + A D ++
Sbjct: 38 IPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRV 97
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H A R G+ ++V +G++LI+ Y KC VE + R+F L V+D +SW S+ + V+
Sbjct: 98 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 157
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +G+ FR+M + +KP ++ SSI+PACA L L GK++HG +R+G N+F+
Sbjct: 158 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVC 217
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ +YAKC ++R AR +FD M D+VSW V+ + SLF +M +DGV+
Sbjct: 218 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 277
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ + AV+ C G ++A F M K G P+
Sbjct: 278 ADEATWNAVIGGCMENGRSEEAVEMFRKMQK-MGFKPN 314
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+G LI + + +LF +P D + +++I+ +GL +E +K + +
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
IKP F + ACA K++H R G ++F+ ++L+ Y KC + AR
Sbjct: 74 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 133
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+FD + + D+VSWT++ G + +F +M GVKPN + ++L AC+
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAE 191
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ + G+ AR +FD + D + + +I HG +++AI ++ +++ G+KP+
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 243 SVAFVAVLTACSHAG 257
F+A AC+ +G
Sbjct: 78 MPVFLAAAKACAVSG 92
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/510 (43%), Positives = 336/510 (65%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ +WNT+I G A + AL + RQM ++PD+ T +L A +DV +G+++H
Sbjct: 104 NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
AIR+G ++ V + ++L++MYA C E +H+LF L+ ++ ++WNS+I G NG +
Sbjct: 164 SIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPN 223
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+M + ++P + S++ ACA L L LG++ H +++ G D N+ ++LL
Sbjct: 224 EALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALL 283
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKCG+IR A +FD+M+ +VSWT++I+G A++G +A+ LF+++E+ G+ P+ +
Sbjct: 284 DLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEI 343
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL ACSH G++D+ + YF M ++YGI P EHY + DLLGRAG +++A+EFI N
Sbjct: 344 TFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQN 403
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLL AC +H ++ L ++ ++P + G YV+LSN YA+ +RW D
Sbjct: 404 MPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDV 463
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M +G+KKTP S +E++N+ + FV GD+SHP I L E+ + ++ EGYV
Sbjct: 464 HKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYV 523
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P VL D+EEE+K+ L YHSE++AI F +I T G IR++KNLRVC DCH AIK I
Sbjct: 524 PHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLI 583
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REI+VRD SRFHHF+DG CSC DYW
Sbjct: 584 SKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 147/270 (54%), Gaps = 4/270 (1%)
Query: 39 PDSFTLSSVLPIFADYVDV-IKGKEIHGYAIRHGLD-ANVCIGSSLI-NMYAKCARVEDS 95
P S+ L + + K ++IH ++IRHG+ N +G LI + + C+ + +
Sbjct: 34 PKSYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYA 93
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
H++F + + +WN++I G ++ L+ +RQM ++ I+P ++ ++ A A L
Sbjct: 94 HQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKL 153
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ G+++H IRNGF+ +F+ ++L+ MYA CG+ A +F+ M ++V+W +VI
Sbjct: 154 MDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVI 213
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G AL+G ++A++LF +M GV+P+ V++L+AC+ G + M K G+
Sbjct: 214 NGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK-VGL 272
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ A+ DL + G +++A++ M
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEM 302
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +LV+WN+VI G A NG EAL + R+MG ++PD FT+ S+L A+ + G
Sbjct: 201 MAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 260
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H Y ++ GLD N+ G++L+++YAKC + +H++F + K +SW S+I G N
Sbjct: 261 RRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVN 320
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F+++ + P ++F ++ AC+H + G + G +
Sbjct: 321 GFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEH 380
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G ++ A M + + V W ++ +HG+
Sbjct: 381 YGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 425
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 219/511 (42%), Positives = 341/511 (66%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL SWN ++ G ++ +AL M + + D TL++ + +++ +GK+I
Sbjct: 1063 DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQ 1122
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ G + ++ + S +++MY KC + ++ LF + D ++W ++I+G ++NG D
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDED 1182
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L + M ++ ++P +F++++ A + LT L GKQ+H +++ + + F+ +SL+
Sbjct: 1183 HALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLV 1242
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG+++ A +F KMD+ +V W A+++G A HG+ +A++LF M+ +G++P+ V
Sbjct: 1243 DMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKV 1302
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL +A+ YF++M K YGI P EHY+ + D LGRAG++QEA I++
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIAS 1362
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ LL ACR + E A +VA+K+ +DP++ AYV+LSN YAA+R+W D
Sbjct: 1363 MPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDV 1422
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG-Y 423
R M+ K +KK P SWI+VKNK + FV D+SHP I E +++L++R+ +EG Y
Sbjct: 1423 TDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSY 1482
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VPDT L DVEEE+K+ LYYHSE+LAI FG+I TP TIR+IKNLRVCGDCH+AIK
Sbjct: 1483 VPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKC 1542
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ QREI++RD +RFHHF +G CSCGDYW
Sbjct: 1543 ISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 168/312 (53%), Gaps = 14/312 (4%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA-----DYVD 56
P DL+SWNT+I A+N L EA+ R + LKPD FTL+SVL + +Y
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ G ++H YAI+ G+ + + ++LI++Y+K +++++ L D SWN+I+ G
Sbjct: 1016 L--GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFG 1073
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+++ + L+ F M I ++ ++ + A L L GKQ+ I+ GF+++
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++++S +LDMY KCG++ A +F ++ D V+WT +I G +G+ A+S++ M
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHY--AAVADLLGRAG 293
GV+P+ F ++ A S +++ ++ K DY S +H+ ++ D+ + G
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCG 1249
Query: 294 KLQEAYEFISNM 305
+Q+AY M
Sbjct: 1250 SVQDAYRVFRKM 1261
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 144/321 (44%), Gaps = 7/321 (2%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S++ +WN + G A++ + + + DS TL +L D+ G++I
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI 916
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H I+ V + +SL+NMY+K V + + F P D ISWN++I+ QN L
Sbjct: 917 HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLE 976
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACA---HLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + FR +L +KP + +S++ AC+ LG Q+H I+ G ++ F++
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y+K G + A + D+ SW A++ G + A+ F M + G+
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 241 PNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + + A LI+ K + G + V D+ + G + A
Sbjct: 1097 IDEITLATAIKAS--GCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 300 EFISNMHAGPTENVWLTLLSA 320
E + + P E W T++S
Sbjct: 1155 ELFGEI-SRPDEVAWTTMISG 1174
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 38/309 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V WN ++ N +EAL +F S P F++ VI G
Sbjct: 778 MPERDAVLWNVMLKAYVENSFQDEALRFF----------SAFHRSGFFPDFSNLHCVIGG 827
Query: 61 --KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++ RH + + YA ++F + +WN + +
Sbjct: 828 VNSDVSNNRKRH---------AEQVKAYAM--------KMFPFDQGSNIFAWNKKLTEFL 870
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + F+ +L + I V+ I+ A L LG+Q+H +I++ F +
Sbjct: 871 HAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVP 930
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+++SL++MY+K G + A F D++SW +I A + +AI F + +DG
Sbjct: 931 VSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA-----PSFEHYAAVADLLGRAG 293
+KP+ +VL ACS + + S Y I SF A + DL + G
Sbjct: 991 LKPDQFTLASVLRACSTGD--EGEYFTLGSQVHVYAIKCGIINDSFVSTALI-DLYSKGG 1047
Query: 294 KLQEAYEFI 302
K+ EA EF+
Sbjct: 1048 KMDEA-EFL 1055
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ GK H + G + + ++LI MY+KC + + ++F +D ++WNSI+
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 115 AGCVQ--NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-----LHLGKQLHGC 167
A Q + ++ L+ FR L ++ S + + A + + + +HG
Sbjct: 685 AAYAQFADSSYENVLEGFR--LFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 168 IIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
++ GF+ ++F++ +L+++Y K G + AR +FDKM D V W ++ + +A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 228 ISLFEQMEKDGVKPN 242
+ F + G P+
Sbjct: 803 LRFFSAFHRSGFFPD 817
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 5 DLVSWNTVIVGLAR--NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG-- 60
DLV+WN+++ A+ + YE L R G L+ F+++ + + ++ G
Sbjct: 676 DLVTWNSILAAYAQFADSSYENVLEGFRLFGL--LREFGFSITRLTLAPLLKLCLLSGFV 733
Query: 61 ---KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+ +HGYA++ G + ++ + +L+N+Y K V + LF +P +DA+ WN ++
Sbjct: 734 QVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAY 793
Query: 118 VQNGLFDEGLKFF 130
V+N DE L+FF
Sbjct: 794 VENSFQDEALRFF 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ L LGK+ H I+ +G + ++ ++L+ MY+KCG++ AR +FDK D+V+W ++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 215 IMGNA 219
+ A
Sbjct: 684 LAAYA 688
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 18/131 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFAD- 53
M V +V WN +++GLA++G +EALN+ R M + ++PD T VL +F++
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEA 1320
Query: 54 --YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-W 110
Y D + Y I ++ C L++ + R++++ + +P K + S +
Sbjct: 1321 YKYFDAM----FKTYGITPEIEHYSC----LVDALGRAGRIQEAENVIASMPFKASASMY 1372
Query: 111 NSIIAGCVQNG 121
+++ C G
Sbjct: 1373 RALLGACRTKG 1383
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 219/511 (42%), Positives = 341/511 (66%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL SWN ++ G ++ +AL M + + D TL++ + +++ +GK+I
Sbjct: 1063 DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQ 1122
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ G + ++ + S +++MY KC + ++ LF + D ++W ++I+G ++NG D
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDED 1182
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L + M ++ ++P +F++++ A + LT L GKQ+H +++ + + F+ +SL+
Sbjct: 1183 HALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLV 1242
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG+++ A +F KMD+ +V W A+++G A HG+ +A++LF M+ +G++P+ V
Sbjct: 1243 DMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKV 1302
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL +A+ YF++M K YGI P EHY+ + D LGRAG++QEA I++
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIAS 1362
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ LL ACR + E A +VA+K+ +DP++ AYV+LSN YAA+R+W D
Sbjct: 1363 MPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDV 1422
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG-Y 423
R M+ K +KK P SWI+VKNK + FV D+SHP I E +++L++R+ +EG Y
Sbjct: 1423 TDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSY 1482
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VPDT L DVEEE+K+ LYYHSE+LAI FG+I TP TIR+IKNLRVCGDCH+AIK
Sbjct: 1483 VPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKC 1542
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ QREI++RD +RFHHF +G CSCGDYW
Sbjct: 1543 ISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 168/312 (53%), Gaps = 14/312 (4%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA-----DYVD 56
P DL+SWNT+I A+N L EA+ R + LKPD FTL+SVL + +Y
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ G ++H YAI+ G+ + + ++LI++Y+K +++++ L D SWN+I+ G
Sbjct: 1016 L--GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFG 1073
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+++ + L+ F M I ++ ++ + A L L GKQ+ I+ GF+++
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++++S +LDMY KCG++ A +F ++ D V+WT +I G +G+ A+S++ M
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHY--AAVADLLGRAG 293
GV+P+ F ++ A S +++ ++ K DY S +H+ ++ D+ + G
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCG 1249
Query: 294 KLQEAYEFISNM 305
+Q+AY M
Sbjct: 1250 SVQDAYRVFRKM 1261
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 144/321 (44%), Gaps = 7/321 (2%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S++ +WN + G A++ + + + DS TL +L D+ G++I
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI 916
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H I+ V + +SL+NMY+K V + + F P D ISWN++I+ QN L
Sbjct: 917 HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLE 976
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACA---HLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + FR +L +KP + +S++ AC+ LG Q+H I+ G ++ F++
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y+K G + A + D+ SW A++ G + A+ F M + G+
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 241 PNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + + A LI+ K + G + V D+ + G + A
Sbjct: 1097 IDEITLATAIKAS--GCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 300 EFISNMHAGPTENVWLTLLSA 320
E + + P E W T++S
Sbjct: 1155 ELFGEI-SRPDEVAWTTMISG 1174
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ GK H + G + + ++LI MY+KC + + ++F +D ++WNSI+
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 115 AGCVQ--NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-----LHLGKQLHGC 167
A Q + ++ L+ FR L ++ S + + A + + + +HG
Sbjct: 685 AAYAQFADSSYENVLEGFR--LFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 168 IIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
++ GF+ ++F++ +L+++Y K G + AR +FDKM D V W ++ + +A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 228 ISLFEQMEKDGVKPN 242
+ F + G P+
Sbjct: 803 LRFFSAFHRSGFXPD 817
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 5 DLVSWNTVIVGLAR--NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG-- 60
DLV+WN+++ A+ + YE L R G L+ F+++ + + ++ G
Sbjct: 676 DLVTWNSILAAYAQFADSSYENVLEGFRLFGL--LREFGFSITRLTLAPLLKLCLLSGFV 733
Query: 61 ---KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+ +HGYA++ G + ++ + +L+N+Y K V + LF +P +DA+ WN ++
Sbjct: 734 QVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAY 793
Query: 118 VQNGLFDEGLKFF 130
V+N DE L+FF
Sbjct: 794 VENSFQDEALRFF 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ L LGK+ H I+ +G + ++ ++L+ MY+KCG++ AR +FDK D+V+W ++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 215 IMGNA 219
+ A
Sbjct: 684 LAAYA 688
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 18/131 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFAD- 53
M V +V WN +++GLA++G +EALN+ R M + ++PD T VL +F++
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEA 1320
Query: 54 --YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-W 110
Y D + Y I ++ C L++ + R++++ + +P K + S +
Sbjct: 1321 YKYFDAM----FKTYGITPEIEHYSC----LVDALGRAGRIQEAENVIASMPFKASASMY 1372
Query: 111 NSIIAGCVQNG 121
+++ C G
Sbjct: 1373 RALLGACRTKG 1383
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/517 (44%), Positives = 331/517 (64%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
+PV D+VSWN +I G A++G EEA+ +M + P+ T+ SVL A ++
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G + + GL +N+ + + LI+MY KC +E++ LF + K+ +SWN +I G
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNM 177
+ E L FR+M+ + I P V+F SI+PACA+L L LGK +H + +N + +
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ +SL+DMYAKCG++ +A+ IFD M+ + +W A+I G A+HG+ A+ LF +M +
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSE 459
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G P+ + FV VLTAC HAGL+ YF+SM +DY ++P HY + DL GRAG E
Sbjct: 460 GFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDE 519
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + NM P +W +LL ACR+H+ +ELA VA+ +F ++P N AYV+LSN YA
Sbjct: 520 AETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAG 579
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW+D A +R + + MKK P CS IEV + + F+ GDK HP + I + L E+ R
Sbjct: 580 AGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMR 639
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+E+ G+VPDT EVL+D++EE K+ +L +HSE+LAI FG+I T GTTIRI+KNLRVCG+C
Sbjct: 640 LEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNC 699
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+A K ISKI REII RD +RFHHF+DG CSC DYW
Sbjct: 700 HSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 169/357 (47%), Gaps = 34/357 (9%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I GL+ + AL M + +P+ +T S+ +GK++H +
Sbjct: 94 VIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAH 153
Query: 67 AIRHGLDANVCIGSSLINMYAKCAR-------------------------------VEDS 95
++ GL+ N + +SLINMYA+ ++++
Sbjct: 154 VLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEA 213
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
LF +PV+D +SWN++I+G Q+G +E + FF +M AK+ P + S++ ACA
Sbjct: 214 RELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQS 273
Query: 156 -TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
++L LG + I G N+ + + L+DMY KCG++ A +F+K+ ++VSW +
Sbjct: 274 GSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVM 333
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDY 273
I G +A+ LF +M + + PN V F+++L AC++ G +D W +
Sbjct: 334 IGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMK 393
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ + + ++ D+ + G L A M+ + W ++S +H + + A
Sbjct: 394 SMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNT-KSLATWNAMISGFAMHGHTDTA 449
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 33/271 (12%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA--ISWNSIIAGCV 118
K+IH I+ GL S LI A + S+ L +++ + WN +I G
Sbjct: 45 KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ L+++ M+ + +P +F SI +C + H GKQ+H +++ G + N F
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF 164
Query: 179 IASSLLDMYAKCG---NIRL----------------------------ARCIFDKMDLHD 207
+ +SL++MYA+ G N RL AR +FD++ + D
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD 224
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSW A+I G A G +A++ FE+M + V PN ++VL+AC+ +G + ++
Sbjct: 225 VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVR 284
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
S +D G+ + + D+ + G L+EA
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 332/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SW +I GLA++GL EAL + + M LKP+ T +S+L + + G
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH I GL + + ++L+NMY+ C V+D+ ++F + +D +++N++I G +
Sbjct: 567 RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAH 626
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L E LK F ++ +KP V++ +++ ACA+ +L K++H ++++G+ + +
Sbjct: 627 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLG 686
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAKCG+ A +FDKM +++SW A+I G A HG D + LFE+M+ +G+K
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIK 746
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V FV++L+ACSHAGL+++ YF SM++D+GI P+ EHY + DLLGRAG+L E
Sbjct: 747 PDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEA 806
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M +W LL ACR+H NV +A + AE +DP+N YV LS+ YAAA
Sbjct: 807 LIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGM 866
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA LR M +G+ K P SWIEV +K + FVA D+SHP +I L +L M+
Sbjct: 867 WDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKM 926
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPDT+ V+HDV+E +K+N + +HSERLAI +G+I T GT IRI KNLRVC DCHTA
Sbjct: 927 EGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTA 986
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFI+KIV REI+ RD +RFHHF+DG CSCGDYW
Sbjct: 987 TKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 190/343 (55%), Gaps = 8/343 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL++WNT+I GLA G +EEA I QM + P+ T +L + + G+EIH
Sbjct: 410 DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G ++ + ++LI+MYA+C ++D+ LF + KD ISW ++I G ++GL
Sbjct: 470 SRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGA 529
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F+ M A +KP V+++SI+ AC+ L G+++H +I G + +A++L+
Sbjct: 530 EALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLV 589
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY+ CG+++ AR +FD+M DIV++ A+I G A H +A+ LF++++++G+KP+ V
Sbjct: 590 NMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 649
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++ +L AC+++G ++ A + + KD G A+ + G +A
Sbjct: 650 TYINMLNACANSGSLEWAKEIHSLVLKD-GYLSDTSLGNALVSTYAKCGSFSDALLVFDK 708
Query: 305 MHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPN 343
M NV W ++ C H + ++ E++ M I P+
Sbjct: 709 MM---KRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPD 748
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 227/464 (48%), Gaps = 58/464 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSW +I G A G E A I ++M + P+ T +VL F+ + G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + G ++++ +G++L+ MYAKC +D ++F L +D I+WN++I G +
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E + + QM + P +++ ++ AC + T LH G+++H ++++GF ++ +
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MYA+CG+I+ AR +F+KM DI+SWTA+I G A G +A+++F+ M++ G+K
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 241 PNSVAFVAVLTACSHAGLIDKAWS-YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V + ++L ACS +D W + + G+A + ++ G +++A
Sbjct: 545 PNRVTYTSILNACSSPAALD--WGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDAR 602
Query: 300 EFISNMHA----------------------------------GPTENVWLTLLSACRVHK 325
+ M P + ++ +L+AC
Sbjct: 603 QVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Query: 326 NVELAGKVAEKIF---MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPAC 382
++E A ++ + + ++G ++ +TYA + DA L VF + M K
Sbjct: 663 SLEWAKEIHSLVLKDGYLSDTSLGNALV--STYAKCGSFSDA--LLVFDK---MMKRNVI 715
Query: 383 SWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
SW A + G H R + L +L ERM+ EG PD
Sbjct: 716 SW-------NAIIGGCAQHG---RGQDVL-QLFERMKMEGIKPD 748
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 233/537 (43%), Gaps = 83/537 (15%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN ++VG + G EEAL ++R+M L T +L + G+EIH A
Sbjct: 211 SWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEA 270
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ L +V + + ++NMYAKC + ++ +F + K +SW II G G +
Sbjct: 271 MKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAF 330
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ F++M + P +++ +++ A + L GK +H I+ G + ++ + ++L+ MY
Sbjct: 331 EIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMY 390
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG+ + R +F+K+ D+++W +I G A GN +A ++ QM+++G+ PN + +V
Sbjct: 391 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYV 450
Query: 248 AVLTAC-----------------------------------SHAGLIDKAWSYFNSMTKD 272
+L AC + G I A FN M +
Sbjct: 451 ILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK 510
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWLTLLSAC-------- 321
I+ + A+ L ++G EA +M P + ++L+AC
Sbjct: 511 DIIS-----WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDW 565
Query: 322 --RVHKNVELAGKVAEKIFMIDPNNMGAYV--ILSNTYAAARRWKDAASLRVFMRNKGMK 377
R+H+ V AG + A+V L N Y+ KDA +VF R M
Sbjct: 566 GRRIHQQVIEAGLATD-----------AHVANTLVNMYSMCGSVKDAR--QVFDR---MT 609
Query: 378 KTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEE 437
+ ++ A + G +H EALK L +R+++EG PD ++ +
Sbjct: 610 QRDIVAY-------NAMIGGYAAHNLG---KEALK-LFDRLQEEGLKPDKVTYINMLNAC 658
Query: 438 QKKNLLYYHSERLAIVFGIICTPDGTTIR-IIKNLRVCGDCHTAIKFISKIVQREII 493
L + E ++V D + ++ CG A+ K+++R +I
Sbjct: 659 ANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVI 715
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 184/381 (48%), Gaps = 42/381 (11%)
Query: 23 EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSL 82
+ A+++V+ + + +S +L + D++ G+E+H + I+H + ++L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 83 INMYAKCARVEDSHRLFCLL--PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
INMY +C +E++ +++ L + SWN+++ G VQ G +E LK R+M +
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
+ ++ +C + L G+++H ++ ++ +A+ +L+MYAKCG+I AR +F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS------ 254
DKM+ +VSWT +I G A G++ A +F++M+++GV PN + ++ VL A S
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362
Query: 255 -----HAGLIDKA----WSYFNSMTKDYGIAPSFEHYAAV------ADL---------LG 290
H+ +++ + ++ K Y S++ V DL L
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 291 RAGKLQEAYEFISNMHAG---PTENVWLTLLSAC----RVHKNVELAGKVAEKIFMIDPN 343
G +EA E M P + ++ LL+AC +H E+ +V + FM D +
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 344 NMGAYVILSNTYAAARRWKDA 364
A + + YA KDA
Sbjct: 483 VQNALISM---YARCGSIKDA 500
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 131/305 (42%), Gaps = 20/305 (6%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ ++ C + L G+++H II++ + + ++L++MY +CG+I AR +++K++
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLN 203
Query: 205 LHD--IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ + SW A+++G +G +A+ L +M++ G+ + +L++C ++
Sbjct: 204 HTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECG 263
Query: 263 WSYFNSMTK-----DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTL 317
K D +A + ++ + G + EA E M + W +
Sbjct: 264 REIHVEAMKARLLFDVNVAN------CILNMYAKCGSIHEAREVFDKMETKSVVS-WTII 316
Query: 318 LSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
+ + E+A ++ +K+ + PN + Y+ + N ++ K ++ + N G
Sbjct: 317 IGGYADCGHSEIAFEIFQKMQQEGVVPNRI-TYINVLNAFSGPAALKWGKTVHSHILNAG 375
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINE---ALKELLERMEQEGYVPDTKEVLH 432
+ A VK A D F +N A ++ + + G + E+ H
Sbjct: 376 HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYH 435
Query: 433 DVEEE 437
++ E
Sbjct: 436 QMQRE 440
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/519 (43%), Positives = 339/519 (65%), Gaps = 9/519 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM--------GNVNLKPDSFTLSSVLPIFADYVD 56
++VSW ++I G +N AL + ++ G+ + D + SVL + +
Sbjct: 217 NIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSE 276
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ +HG+ I+ G + ++ + ++L++ YAKC + S R+F + +D ISWNSIIA
Sbjct: 277 KSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAV 336
Query: 117 CVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
QNG+ E ++ F +M+ +I V+ S+++ ACAH + LGK +H +I+ G +
Sbjct: 337 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 396
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F+ +S++DMY KCG + +AR FD+M ++ SW+A++ G +HG+A +A+ +F +M
Sbjct: 397 NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 456
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
GVKPN + FV+VL ACSHAGL+++ W +F +M+ ++ + P EHY + DLLGRAG L
Sbjct: 457 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 516
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
+EA++ I M P VW LL ACR+HKNV+L A K+F +DP N G YV+LSN Y
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIY 576
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A A RW+D +R+ M+N G+ K P S +++K + + F+ GD+ HP + +I E L++L
Sbjct: 577 ADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLS 636
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
++++ GYVPD VLHDV E+K+ +L HSE+LA+ FGI+ T GTTI IIKNLRVCG
Sbjct: 637 MKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCG 696
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCHTAIKFISKIV REI+VRD+ RFHHF DG CSCGDYW
Sbjct: 697 DCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 197/367 (53%), Gaps = 21/367 (5%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++ SWN+VI LAR+G EAL M ++LKP+ T + + +D+ G++
Sbjct: 115 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 174
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A+ G + ++ + S+L++MY+KC + D+ LF + ++ +SW S+I G VQN
Sbjct: 175 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 234
Query: 124 DEGLKFFRQMLIAK----------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
L F++ L+ + + P ++ S++ AC+ ++ + + +HG +I+ GF
Sbjct: 235 HRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGVHGFLIKRGF 292
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ ++ + ++L+D YAKCG + ++R +FD M D++SW ++I A +G + +++ +F +
Sbjct: 293 EGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 352
Query: 234 MEKDG-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
M KDG + N+V AVL AC+H+G + + K G+ + ++ D+ +
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVGTSIIDMYCKC 411
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVI 350
GK++ A + M ++ W +++ +H + + A +V ++ M + PN Y+
Sbjct: 412 GKVEMARKAFDRMREKNVKS-WSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN----YIT 466
Query: 351 LSNTYAA 357
+ AA
Sbjct: 467 FVSVLAA 473
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
M D++SWN++I A+NG+ E++ I +M G +N ++ TLS+VL A
Sbjct: 322 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY--NAVTLSAVLLACAHSGSQ 379
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
GK IH I+ GL++NV +G+S+I+MY KC +VE + + F + K+ SW++++AG
Sbjct: 380 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 439
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G E L+ F +M +A +KP +++F S++ AC+H L G + + FD
Sbjct: 440 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA-MSHEFDVEP 498
Query: 178 FIA--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ ++D+ + G ++ A + M L D V W A++ +H N
Sbjct: 499 GVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 547
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 199 IFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+F+K +D ++ SW +VI A G++ +A+ F M K +KPN F + +CS
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCS--A 164
Query: 258 LID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
L+D + + +G P +A+ D+ + G+L++A
Sbjct: 165 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDA 206
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/515 (44%), Positives = 340/515 (66%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
M V + VSW+ +I G + +EAL + QM + + P TL SVL A D+ +
Sbjct: 271 MGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H Y I+ G ++ +G++L++MYAKC ++D+ R F + KD++S+++I++GCVQ
Sbjct: 331 GRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG L FR M ++ I P + ++PAC+HL L G HG +I GF + I
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY+KCG I AR +F++MD HDIVSW A+I+G +HG +A+ LF + G+
Sbjct: 451 CNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + F+ +L++CSH+GL+ + +F++M++D+ I P EH + D+LGRAG + EA+
Sbjct: 511 KPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAH 570
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI NM P +W LLSACR+HKN+EL +V++KI + P + G +V+LSN Y+AA
Sbjct: 571 HFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAG 630
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW DAA +R+ ++ G+KK P CSWIE+ +AFV GD+SH +IN L+ELL M+
Sbjct: 631 RWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK 690
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY + V DVEEE+K+ +L YHSE+LAI FGI+ G I + KNLRVCGDCHT
Sbjct: 691 RLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHT 750
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKF++ I +REI VRD +RFHHF++G C+CGD+W
Sbjct: 751 AIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 7/347 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN +I A NG ++ A+++ M ++ ++P+ +T VL + + + G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
EIH +A GL+++V + ++L++ YAKC + ++ RLF + +D ++WN++IAGC
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL D+ ++ QM I P + ++P L GK LHG +R FD+ + +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+ LLDMYAKC + AR IFD M + + VSW+A+I G +A+ LF+QM KD +
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAM 308
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P V +VL AC+ + + + K G + + + G + +A
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK-LGSVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 300 EFISNMHAGPTENVWLT-LLSACRVHKNVELAGKVAEKIFM--IDPN 343
F M+ P ++V + ++S C + N +A + + + IDP+
Sbjct: 368 RFFDEMN--PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ + K+IH + +++ +A+ + L +Y C +V + RLF +P I WN II
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRA 83
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
NG FD + + ML ++P ++ ++ AC+ L + G ++H G + +
Sbjct: 84 YAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESD 143
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ ++L+D YAKCG + A+ +F M D+V+W A+I G +L+G DA+ L QM++
Sbjct: 144 VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE 203
Query: 237 DGVKPNSVAFVAVLTACSHA 256
+G+ PNS V VL A
Sbjct: 204 EGICPNSSTIVGVLPTVGEA 223
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ AC +L K++H ++N + + + L +Y C + LAR +FD++
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++ W +I A +G AI L+ M GV+PN + VL ACS I+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-IH 132
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
S K +G+ A+ D + G L EA S+M W +++ C ++
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV-AWNAMIAGCSLY 188
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/515 (44%), Positives = 339/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
M V + VSW+ +I G + +EAL + QM + + P TL SVL A D+ +
Sbjct: 271 MGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H Y I+ G ++ +G++L++MYAKC ++D+ R F + KD++S+++I++GCVQ
Sbjct: 331 GRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQ 390
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG L FR M ++ I P + ++PAC+HL L G HG +I GF + I
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY+KCG I AR +F++MD HDIVSW A+I+G +HG +A+ LF + G+
Sbjct: 451 CNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + F+ +L++CSH+GL+ + +F++M++D+ I P EH + D+LGRAG + EA+
Sbjct: 511 KPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAH 570
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI NM P +W LLSACR+HKN+EL +V++KI + P + G +V+LSN Y+AA
Sbjct: 571 HFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAG 630
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW DAA +R+ ++ G+KK P CSWIE+ +AFV GD+SH +IN L+ELL M+
Sbjct: 631 RWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK 690
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY + V DVEEE+K+ +L YHSE+LAI FGI+ G I + KNLRVCGDCH
Sbjct: 691 RLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHA 750
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKF++ I +REI VRD +RFHHF++G C+CGD+W
Sbjct: 751 AIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 7/347 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN +I A NG ++ A+++ M ++ ++P+ +T VL + + + G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
EIH +A GL+++V + ++L++ YAKC + ++ RLF + +D ++WN++IAGC
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL D+ ++ QM I P + ++P L GK LHG +R FD+ + +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+ LLDMYAKC + AR IFD M + + VSW+A+I G +A+ LF+QM KD +
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAM 308
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P V +VL AC+ + + + K G + + + G + +A
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK-LGXVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 300 EFISNMHAGPTENVWLT-LLSACRVHKNVELAGKVAEKIFM--IDPN 343
F M+ P ++V + ++S C + N +A + + + IDP+
Sbjct: 368 RFFDXMN--PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ + K+IH + +++ +A+ + L +Y C +V + RLF +P I WN II
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRA 83
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
NG FD + + ML ++P ++ ++ AC+ L + G ++H G + +
Sbjct: 84 YAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESD 143
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ ++L+D YAKCG + A+ +F M D+V+W A+I G +L+G DA+ L QM++
Sbjct: 144 VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE 203
Query: 237 DGVKPNSVAFVAVLTACSHA 256
+G+ PNS V VL A
Sbjct: 204 EGICPNSSTIVGVLPTVGEA 223
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ AC +L K++H ++N + + + L +Y C + LAR +FD++
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++ W +I A +G AI L+ M GV+PN + VL ACS I+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-IH 132
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
S K +G+ A+ D + G L EA S+M W +++ C ++
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV-AWNAMIAGCSLY 188
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 338/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D SWN I G + EAL + R M + + FTLSS L A +
Sbjct: 179 MPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL 238
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHGY IR L+ + + S+L+++Y KC ++++ +F + +D +SW ++I C +
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFE 298
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +EG FR ++ + ++P +F+ ++ ACA HLGK++HG ++ G+D F
Sbjct: 299 DGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFA 358
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+ MY+KCGN R+AR +F++M D+VSWT++I+G A +G +A+ FE + + G
Sbjct: 359 ISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGT 418
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V +V VL+AC+HAGL+DK YF+S+ + +G+ + +HYA V DLL R+G+ +EA
Sbjct: 419 KPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAE 478
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I NM P + +W +LL CR+H N+ELA + A+ ++ I+P N Y+ L+N YA A
Sbjct: 479 NIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAG 538
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W + A++R M N G+ K P SWIE+K + + F+ GD SHP I+E L EL ++++
Sbjct: 539 LWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIK 598
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGYVPDT VLHDVEEEQK+ L YHSE+LA+VFGII TP GT I++ KNLR C DCHT
Sbjct: 599 EEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHT 658
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+ISKIVQR+I VRD++RFH FEDG CSC DYW
Sbjct: 659 AIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 153/355 (43%), Gaps = 64/355 (18%)
Query: 16 LARNGLYEEALNIVRQMGNV----------NLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
++ + +EEA++++ Q V + +P + S+++ + + G+ +H
Sbjct: 52 VSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHA 111
Query: 66 YAIRHGLDANVCIGSSLINMYAKC-------------------------------ARVED 94
+ V I + L++MYAKC R+E
Sbjct: 112 HTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQ 171
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS------- 147
+ +LF +P +D SWN+ I+G V + E L+ FR M RH SS
Sbjct: 172 ARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVM------QRHERSSSNKFTLSS 225
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
+ A A + L LGK++HG +IR + + + S+LLD+Y KCG++ AR IFD+M D
Sbjct: 226 ALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRD 285
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSWT +I G + LF + + GV+PN F VL AC+ D A +
Sbjct: 286 VVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACA-----DHAAEHLG 340
Query: 268 SMTKDY----GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLL 318
Y G P +A+ + + G + A + MH P W +L+
Sbjct: 341 KEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ-PDLVSWTSLI 394
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 336/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSW ++I G AR GL + ++ + +M + PD FT++++L A + G
Sbjct: 312 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + + +++ + ++L++MYAKC + D+H +F + VKD +SWN++I G +N
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L F +M KP ++ + I+PACA L L G+++HG I+RNGF + +A
Sbjct: 432 SLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG + LAR +FD + D+VSWT +I G +HG +AI+ F +M G++
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+D+ W +FN M + I P EHYA + DLL RAG L +AY+
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +W LL CR++ +V+LA KVAE +F ++P N G YV+L+N YA A +
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ LR + +G++K P CSWIE+K K + FV GD SHP ++I LK+ RM++
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKE 730
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EG+ P + L ++ +K+ L HSE++A+ FGI+ P G T+R+ KNLRVCGDCH
Sbjct: 731 EGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEM 790
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+V+R+II+RD++RFHHF+DG CSC +W
Sbjct: 791 AKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 150/258 (58%), Gaps = 1/258 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN++I G NGL E+ L++ QM + + D T+ SV+ ++ ++ G+ +H
Sbjct: 215 DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALH 274
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GYAI+ + + + L++MY+K + + ++F + + +SW S+IAG + GL D
Sbjct: 275 GYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 334
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
++ F +M I P + ++I+ ACA L GK +H I N ++F++++L+
Sbjct: 335 MSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALM 394
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG++ A +F +M + DIVSW +I G + + ++A++LF +M+ + KPNS+
Sbjct: 395 DMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSI 453
Query: 245 AFVAVLTACSHAGLIDKA 262
+L AC+ +++
Sbjct: 454 TMACILPACASLAALERG 471
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 152/336 (45%), Gaps = 54/336 (16%)
Query: 24 EALNIVRQMGNVNLKP----DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
E N+ R M +N P + T SVL + AD + G+ IH + ++ + +G
Sbjct: 80 ELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG 139
Query: 80 SSLINMYAKCA------------------------------------------------- 90
S L+ MY C
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR 199
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
RVE + +LF L +D ISWNS+I+G V NGL ++GL F QML+ I + S++
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
C++ L LG+ LHG I+ F + + + LLDMY+K GN+ A +F+ M +VS
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
WT++I G A G + ++ LF +MEK+G+ P+ +L AC+ GL++ N +
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI- 378
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
K+ + A+ D+ + G + +A+ S M
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQ 414
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 338/549 (61%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SW ++ GL EAL R+MG +P+S T+SS+LP D D+ G
Sbjct: 139 MPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSG 198
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN--------- 111
+E+HG+ +R+G+ NV + S+L+NMYA C + + +F + +D +SWN
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 112 --------------------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
++I GC+QNG ++ L+ +M + KP ++
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S++PAC +L +L GKQ+HG I R+ F ++ ++L+ MYAKCG++ L+R +F M
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D VSW +I+ ++HGN +A+ LF +M GV+PNSV F VL+ CSH+ L+D+
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLI 438
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F+SM++D+ + P +H++ + D+L RAG+L+EAYEFI M PT W LL CRV+K
Sbjct: 439 FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYK 498
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
NVEL A ++F I+ +N G YV+LSN +A+ W +A+ R MR++G+ K P CSWI
Sbjct: 499 NVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWI 558
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+V+N+ + FV GDKS+ I L + E+M GY+P+T VL DV++E+K+ +L
Sbjct: 559 QVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCN 618
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LA+ FG++ ++IR+ KNLR+CGDCH AIKF++KIV +IIVRD+ RFHHF D
Sbjct: 619 HSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRD 678
Query: 506 GKCSCGDYW 514
G CSC D+W
Sbjct: 679 GLCSCQDFW 687
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 155/279 (55%), Gaps = 2/279 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+P DL +W +I L ++G EA+ + N ++PD L SV A DV+
Sbjct: 37 IPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMN 96
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H AIR G ++V +G++LI+MY KC E + +F +P +D ISW S+ + V
Sbjct: 97 AKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVN 156
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL E L FR+M + +P V+ SSI+PAC L L G+++HG ++RNG N+F+
Sbjct: 157 CGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFV 216
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S+L++MYA C +IR A+ +FD M D VSW +I L+ +S+F +M +GV
Sbjct: 217 SSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGV 276
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
N ++ AV+ C G +KA + M ++ G P+
Sbjct: 277 GLNYASWNAVIGGCMQNGRTEKALEVLSRM-QNSGFKPN 314
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KD 237
+A + +Y+ G+++ AR +FDK+ D+ +WT +I HG + +AI + K+
Sbjct: 13 LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72
Query: 238 GVKPNSVAFVAVLTACS 254
V+P+ + ++V AC+
Sbjct: 73 CVEPDKLLLLSVAKACA 89
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/554 (42%), Positives = 337/554 (60%), Gaps = 44/554 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ WN ++ G G +++ALN+ R+M +KP+S T++S + + + G+EIH
Sbjct: 176 DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 235
Query: 65 GYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCL---------------------- 101
GY I+ LD+++ +G+SL++ YAKC VE + R F +
Sbjct: 236 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYG 295
Query: 102 ---------------------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
L +D + WNSII+ C Q+G L R+M ++ ++
Sbjct: 296 DGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 355
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
V+ S +PAC+ L L GK++H IIR G D FI +SL+DMY +CG+I+ +R IF
Sbjct: 356 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 415
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D M D+VSW +I +HG DA++LF+Q G+KPN + F +L+ACSH+GLI+
Sbjct: 416 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 475
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ W YF M +Y + P+ E YA + DLL RAG+ E EFI M P VW +LL A
Sbjct: 476 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 535
Query: 321 CRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTP 380
CR+H N +LA A +F ++P + G YV+++N Y+AA RW+DAA +R M+ +G+ K P
Sbjct: 536 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 595
Query: 381 ACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKK 440
CSWIEVK K ++FV GD SHP +I+ ++ L +++ GYVPDT VL DV+E++K+
Sbjct: 596 GCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKE 655
Query: 441 NLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRF 500
L HSE++A+ FG+I T GT +RIIKNLRVCGDCH+A KFISK+ +R+II+RDN RF
Sbjct: 656 FSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRF 715
Query: 501 HHFEDGKCSCGDYW 514
HHF DG CSCGDYW
Sbjct: 716 HHFVDGVCSCGDYW 729
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 142/266 (53%), Gaps = 9/266 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++ SW ++ G YEE + + M N ++PD F V ++ + G
Sbjct: 71 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+++ Y + G + N C+ S+++M+ KC R++ + R F + KD WN +++G
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNMFI 179
G F + L FR+M++ +KP ++ +S + AC +L+ L G+++HG CI D ++ +
Sbjct: 191 GEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 250
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV--IMGNALHGNAHDAISLFEQME-- 235
+SL+D YAKC ++ +AR F + D+VSW A+ + G +G+ A+ F++M
Sbjct: 251 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIA 310
Query: 236 ----KDGVKPNSVAFVAVLTACSHAG 257
+ + V + ++++AC+ +G
Sbjct: 311 CSVFSELSTRDVVVWNSIISACAQSG 336
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 112/200 (56%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++H + +G+D +GS L+ +Y + VED+ R+F + ++ SW +I+
Sbjct: 29 GFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCG 88
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G ++E +K F M+ ++P H F + AC+ L +GK ++ ++ GF+ N +
Sbjct: 89 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 148
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+LDM+ KCG + +AR F++++ D+ W ++ G G A+++F +M +GV
Sbjct: 149 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGV 208
Query: 240 KPNSVAFVAVLTACSHAGLI 259
KPNS+ + ++AC++ L+
Sbjct: 209 KPNSITIASAVSACTNLSLL 228
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++SI+ C L L LG Q+H ++ NG D F+ S LL++Y + G + AR +FDKM
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++ SWTA++ G+ + I LF M +GV+P+ F V ACS
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 265 YFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEAYEFISNMH 306
+ DY ++ FE + V D+ + G++ A F +
Sbjct: 133 VY-----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE 173
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWN +I +G +A+N+ +Q + LKP+ T +++L + + +G
Sbjct: 418 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
K + +D V + ++++ ++ + ++ +P + +A W S++ C
Sbjct: 478 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 536
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/514 (43%), Positives = 330/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSW ++I G R GL + A+ + +M + + PD + ++S+L A ++ G
Sbjct: 414 MDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG 473
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y + L+ N + ++L +MYAKC ++D+H +F + KD ISWN++I G +N
Sbjct: 474 KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN 533
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L F +M + KP + + I+PACA L L G+++HG +RNG+ ++ ++
Sbjct: 534 SLPNEALTLFAEMQ-RESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVT 592
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMY KCG + LAR +FD + D+VSWT +I G +HG +AI+ F QM G++
Sbjct: 593 NAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+D+ W FN M K+ I P+ EHYA + DLL R G L +A++
Sbjct: 653 PDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK 712
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +W LL CR+H +V+LA KVAE+IF ++P N G YV+L+N YA A +
Sbjct: 713 FIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEK 772
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ LR + +G+KK P CSWIE+K K FVAGD S P +I LK L +M++
Sbjct: 773 WEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKE 832
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY P T L + +E +K+ L HSE+LA+ FG++ P G TIR+ KNLRVCGDCH
Sbjct: 833 EGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEM 892
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK REII+RD+SRFHHF+DG CSC YW
Sbjct: 893 AKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 177/303 (58%), Gaps = 2/303 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S + WN +I + +G Y E++N+ +QM + +KP+S+T SS+L FA V +G+++
Sbjct: 214 SKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG + G ++ + +SLI+ Y +V + +LF L +D ISWNS+I+G V+NGL
Sbjct: 274 HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLD 333
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASS 182
D G++ F +ML+ + + ++ ACA++ TL LGK LH I+ D + ++
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNT 393
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LLDMY+KCG++ A +F++MD +VSWT++I G G + AI LF++M+ GV P+
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPD 453
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
A ++L AC+ G + K+ + ++ + + A+ D+ + G +++A++
Sbjct: 454 VYAVTSILNACAINGNL-KSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512
Query: 303 SNM 305
S+M
Sbjct: 513 SHM 515
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 145/259 (55%), Gaps = 2/259 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN++I G +NGL + + I +M + D T+ +V A+ ++ GK +H
Sbjct: 316 DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLH 375
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
Y+I+ LD V ++L++MY+KC + + R+F + K +SW S+I G V+ GL
Sbjct: 376 SYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLS 435
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
D +K F +M + P + +SI+ ACA L GK +H I N + N F++++L
Sbjct: 436 DGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNAL 495
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
DMYAKCG+++ A +F M D++SW +I G + ++A++LF +M+++ KP+
Sbjct: 496 TDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDG 554
Query: 244 VAFVAVLTACSHAGLIDKA 262
+L AC+ +DK
Sbjct: 555 TTVACILPACASLAALDKG 573
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 13 IVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL 72
IV G + A+ ++ N N ++ S+L + A+ + G+ + G+
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYC--SILQLCAERKSIRDGRRVRSIIESSGV 181
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ +G L+ MY KC +++ +F L WN +I+ +G + E + F+Q
Sbjct: 182 MIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQ 241
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML IKP +FSSI+ A + + G+Q+HG I + GF+ + +SL+ Y
Sbjct: 242 MLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRK 301
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+R A+ +FD++ D++SW ++I G +G I +F +M GV + V V A
Sbjct: 302 VRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVA 361
Query: 253 CSHAGLI 259
C++ G +
Sbjct: 362 CANIGTL 368
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 339/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW +I G +++G EAL + +M ++ +P+ FTLSS+L G
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++++G D NV +GSSL++MYA+ A + ++ +F L K+ +SWN++IAG +
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + ++ F QML +P H ++SS+ ACA +L GK +H +I++G +I
Sbjct: 286 GEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIG 345
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAK G+I+ A+ +F ++ DIVSW ++I G A HG +A+ LFEQM K V+
Sbjct: 346 NTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQ 405
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F++VLTACSH+GL+D+ YF M K + I H+ V DLLGRAG+L EA +
Sbjct: 406 PNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANK 464
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL +CR+HKN++L AE+IF +DP++ G +V+LSN YA+A R
Sbjct: 465 FIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGR 524
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
DAA +R M+ G+KK PACSW+E++N+ + FVA D SHP I +++ ++++
Sbjct: 525 LSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKE 584
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL + ++ ++ L YHSE+LA+ F ++ TP G TIRI KN+R+CGDCH+A
Sbjct: 585 IGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSA 644
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF S+++ REIIVRD +RFHHF G CSC DYW
Sbjct: 645 FKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
+L+P+ S +L + +G+ IH + + ++ + + ++NMYAKC +E++
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
LF +P KD +SW +I+G Q+G E L F +ML +P + SS++ A
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ H G+QLH ++ G+D N+ + SSLLDMYA+ ++R A+ IF+ + ++VSW A+I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G+A G + LF QM + G +P + +V TAC+ +G +++ + ++ G
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQG-KWVHAHVIKSGG 338
Query: 276 APSFEHYAAVADLLGRAGKLQEA 298
P + D+ ++G +++A
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDA 361
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/510 (43%), Positives = 339/510 (66%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL SWN ++ G +G + +AL + M + + TL++ V + +GK+I
Sbjct: 1073 DLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQ 1132
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G + ++ + S +++MY KC +E + R+F +P D ++W ++I+GCV+NG +
Sbjct: 1133 AVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEE 1192
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L + M ++K++P +F++++ AC+ LT L G+Q+H ++ + F+ +SL+
Sbjct: 1193 HALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLV 1252
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI AR +F + + I SW A+I+G A HGNA +A+ FE+M+ GV P+ V
Sbjct: 1253 DMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRV 1312
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL+ +A+ F SM K YGI P EHY+ + D L RAG+++EA + IS+
Sbjct: 1313 TFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISS 1372
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ TLL+ACRV + E +VAEK+ ++P++ AYV+LSN YAAA +W++
Sbjct: 1373 MPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENV 1432
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS R MR +KK P SW+++KNK + FVAGD+SH I ++ +++R+ +EGY+
Sbjct: 1433 ASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYL 1492
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT L DVEEE K+ LYYHSE+LAI +G++ TP TT+R+IKNLRVCGDCH AIK+I
Sbjct: 1493 PDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYI 1552
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ +RE+++RD +RFHHF G CSCGDYW
Sbjct: 1553 SKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 158/320 (49%), Gaps = 5/320 (1%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
SD+++WN + + G EA++ M N + D T +L + A + GK+I
Sbjct: 869 SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQI 928
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG +R GLD V +G+ LINMY K V + +F + D +SWN++I+GC +GL
Sbjct: 929 HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + F +L + P + +S++ AC+ L HL Q+H C ++ G + F++++
Sbjct: 989 ECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+D+Y+K G + A +F D D+ SW A++ G + G+ A+ L+ M++ G + N
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 243 SVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ A GL+ K ++ G + V D+ + G+++ A
Sbjct: 1109 QITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARR- 1165
Query: 302 ISNMHAGPTENVWLTLLSAC 321
I N P + W T++S C
Sbjct: 1166 IFNEIPSPDDVAWTTMISGC 1185
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 170/336 (50%), Gaps = 7/336 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK-GKEI 63
DLVSWNT+I G A +GL E ++ + + L PD FT++SVL + +I
Sbjct: 971 DLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQI 1030
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A++ G+ + + ++LI++Y+K ++E++ LF D SWN+++ G + +G F
Sbjct: 1031 HACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDF 1090
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L+ + M + + ++ ++ A L L GKQ+ +++ GF+ ++F+ S +
Sbjct: 1091 PKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGV 1150
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
LDMY KCG + AR IF+++ D V+WT +I G +G A+ + M V+P+
Sbjct: 1151 LDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDE 1210
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEF 301
F ++ ACS +++ + K + +F+ + ++ D+ + G +++A
Sbjct: 1211 YTFATLVKACSLLTALEQGRQIHANTVK---LNCAFDPFVMTSLVDMYAKCGNIEDARGL 1267
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ + W ++ H N E A + E++
Sbjct: 1268 FKRTNTSRIAS-WNAMIVGLAQHGNAEEALQFFEEM 1302
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 28/304 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+V WN ++ GL EAL + + L+PD TL ++ + +V++
Sbjct: 788 MGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEW 847
Query: 61 --KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K++ Y + + + GS D I+WN ++ +
Sbjct: 848 QLKQLKAYGTKLFMYDDDDDGS-------------------------DVIAWNKTLSWFL 882
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G E + F M+ +++ ++F ++ A L L LGKQ+HG ++R+G D +
Sbjct: 883 QRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVS 942
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L++MY K G++ AR +F +M+ D+VSW +I G AL G ++ +F + + G
Sbjct: 943 VGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGG 1002
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ +VL ACS G + ++ G+ + D+ ++GK++EA
Sbjct: 1003 LLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062
Query: 299 YEFI 302
EF+
Sbjct: 1063 -EFL 1065
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V+W T+I G NG E AL M ++PD +T ++++ + + +G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH ++ + + +SL++MYAKC +ED+ LF SWN++I G Q+
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
G +E L+FF +M + P V+F ++ AC+H + + + G + +
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEH 1349
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM 203
S L+D ++ G IR A + M
Sbjct: 1350 YSCLVDALSRAGRIREAEKVISSM 1373
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
D+ GK H + G + + ++LI MY+KC + + +LF P +D ++WN+I
Sbjct: 641 DLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAI 700
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
++ +G FR + + + + + + C + + LHG ++ G
Sbjct: 701 LSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
++F+A +L+++YAK G IR AR +FD M L D+V W ++ G ++A+ LF +
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818
Query: 234 MEKDGVKPNSVAF 246
+ G++P+ V
Sbjct: 819 FNRTGLRPDDVTL 831
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WN ++ A + ++ R + + TL+ V + + +H
Sbjct: 693 DLVTWNAILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GYA++ GL +V + +L+N+YAK R+ ++ LF + ++D + WN ++ V GL
Sbjct: 751 GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY 810
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSI 148
E L F + ++P V+ ++
Sbjct: 811 EALLLFSEFNRTGLRPDDVTLCTL 834
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 138 IKPRHVSFS-----SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
I P H+ S SI+ + L LGK+ H I+ +G + F+ ++L+ MY+KCG+
Sbjct: 617 IPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGS 676
Query: 193 IRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+ AR +FD D+V+W A++ +A A D LF + + V V
Sbjct: 677 LSSARKLFDTTPDTSRDLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVF 734
Query: 251 TACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
C + A S K G+ A+ ++ + G+++EA M
Sbjct: 735 KMCLLSASPSAAESLHGYAVK-IGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 327/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SW T+I GL +NGL EA+++ R M + D +T SVL + +G
Sbjct: 230 MKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEG 289
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH IR G + NV +GS+L++MY KC V + +F + K+ +SW +++ G QN
Sbjct: 290 KEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQN 349
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E ++ F M I+P + S++ +CA+L +L G Q H + +G + ++
Sbjct: 350 GFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVS 409
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG+I + +FD+M D VSWTA++ G A G A++ I LFE+M G+K
Sbjct: 410 NALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLK 469
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P++V F+AVL+ACS AGL+++ YF SM KD+GI P +HY + DL GRAG+L+EA
Sbjct: 470 PDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKN 529
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI+ M P W TLLS+CR++ N E+ AE + +DP N Y++LS+ YAA +
Sbjct: 530 FINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGK 589
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A LR MR KG +K P SWI+ K+K Y F A D+S PF +I L++L +M +
Sbjct: 590 WSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIE 649
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VLHDVE+ +K +L +HSE+LAI FG++ P G IR++KNLRVCGDCH A
Sbjct: 650 EGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNA 709
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKI QREI+VRD RFH F+DG CSCGD+W
Sbjct: 710 TKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 184/354 (51%), Gaps = 38/354 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP D VSWN++I G G EA+ M G +NL + T S++L + + V
Sbjct: 97 MPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNL--NRITFSTMLLLVSSQGCV 154
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAK----------------------------- 88
G++IHG ++ G A V +GSSL++MYAK
Sbjct: 155 DLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGL 214
Query: 89 --CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
V+DS RLF + +D+ISW ++I G +QNGL E + FR M + +F
Sbjct: 215 LRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFG 274
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ AC L L GK++H IIR+G++ N+F+ S+L+DMY KC ++R A +F +M
Sbjct: 275 SVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANK 334
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
++VSWTA+++G +G + +A+ +F M+++G++P+ +V+++C++ +++ + F
Sbjct: 335 NVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEG-AQF 393
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ G+ A+ L G+ G ++++ + M + E W L+S
Sbjct: 394 HCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM-SFRDEVSWTALVSG 446
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 6/222 (2%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKI 138
+++++ Y+K + +F ++P +D +SWNS+I+G V G E +K + M+ +
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
++FS+++ + + LG+Q+HG I++ GF +F+ SSL+DMYAK G + +A
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD++ ++V + +I G G D+ LF M+ + +S+++ ++T GL
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMK----ERDSISWTTMITGLIQNGL 250
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+A F M ++ G+A + +V G L+E E
Sbjct: 251 EAEAMDLFRDMRQE-GMAMDQYTFGSVLTACGGLRALKEGKE 291
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 32/141 (22%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-------- 203
C K+LH II++ + F+ ++L++ Y+K GNI AR +FDKM
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 204 -----------DL------------HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV- 239
DL D VSW ++I G +G+ +A+ + M KDGV
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 240 KPNSVAFVAVLTACSHAGLID 260
N + F +L S G +D
Sbjct: 135 NLNRITFSTMLLLVSSQGCVD 155
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/509 (45%), Positives = 324/509 (63%), Gaps = 31/509 (6%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
+KP+ FTLS+V+ A + +GK+ H Y I+ G +++V + ++L++MYA+C +ED+
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 97 -------------------------------RLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+LF + +D +SW ++IAG QNG DE
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L F QM +K S++ ACA L L LG+Q H ++++GF ++ + S+L+D
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAK G++ A +FDKM + VSW ++I G A HG +DA+ LFEQM + G+KPN ++
Sbjct: 186 MYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
FV VL+ACSH GL+++ YFN MT++YGI P HY + DLLGRAG L EA FI+ M
Sbjct: 246 FVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGM 305
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +VW LL ACR+H N ELA ++AE + ++ G YV+LSN YAAA +W DAA
Sbjct: 306 PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAA 365
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R M+++G+ K P SWIEVK +AFVAG+ SHP I+E L+ L +M+ GYVP
Sbjct: 366 KVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVP 425
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
+ VL DVE+++K+ L +HSE+LAI FGII T GTTIR+ KNLRVCGDCHT IKFIS
Sbjct: 426 NKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFIS 485
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R+I+VRD +RFHHF+DG+CSCGDYW
Sbjct: 486 LNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 149/277 (53%), Gaps = 4/277 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW VI G A+NG +E+LN+ QM +K D F + SVL AD + G
Sbjct: 102 MSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELG 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H Y ++ G ++ +GS+L++MYAK +ED+ ++F +P ++ +SWNSII GC Q+
Sbjct: 162 RQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQH 221
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ + F QML A IKP +SF ++ AC+H ++ G+ + +N G ++
Sbjct: 222 GRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSH 281
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A + M + D+ W A++ +HGN A + E +
Sbjct: 282 YTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGME 341
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
V+ + +V + + AG D A + + KD G+
Sbjct: 342 VQIAGI-YVLLSNIYAAAGQWDDA-AKVRKLMKDRGV 376
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 328/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +VSW ++ A+NG EAL I QM +++KPD L SVL F D+ +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++ GL+ + SL MYAKC +V + LF + + I WN++I+G +N
Sbjct: 242 RSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F +M+ ++P +S +S + ACA + +L + + + R+ + D++FI+
Sbjct: 302 GFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFIS 361
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DM+AKCG++ AR +FD+ D+V W+A+I+G LHG A +AISL+ ME+DGV
Sbjct: 362 SALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVH 421
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L AC+H+G++ + W +FN M D+ I P +HYA + DLLGRAG L +AYE
Sbjct: 422 PNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYE 480
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P VW LLSAC+ H++VEL A+++F IDP+N G YV LSN YAAAR
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +RV M+ KG+ K CSW+EV+ + F GDKSHP Y I ++ + R+++
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+V + LHD+ +E+ + L HSER+ I +G+I TP GTT+RI KNLR C +CH A
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAA 660
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK+V REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 661 TKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 145/264 (54%), Gaps = 2/264 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + WN +I G +RN +++AL + +M + PDSFT +L + G
Sbjct: 79 LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
+ +H R G +A+V + + LI +YAKC R+ + +F LP + +SW +I++
Sbjct: 139 RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E L+ F QM +KP V+ S++ A L L G+ +H +++ G +
Sbjct: 199 QNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPD 258
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SL MYAKCG + A+ +FDKM +++ W A+I G A +G A DAI LF +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD 318
Query: 239 VKPNSVAFVAVLTACSHAGLIDKA 262
V+P++++ + ++AC+ G +++A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQA 342
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 137/262 (52%), Gaps = 4/262 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + GL + + + LI+ + + + ++F LP WN+II G +N
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + L + +M +A++ P +F ++ AC L+ L +G+ +H + R GF+ ++F+
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+ +YAKC + AR +F+ + L + IVSWTA++ A +G +A+ +F QM K
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ VA V+VL A + +++ S S+ K G+ + ++ + + G++ A
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMK-MGLETEPDLLISLNTMYAKCGQVATA 276
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
M + P +W ++S
Sbjct: 277 KILFDKMKS-PNLILWNAMISG 297
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 334/510 (65%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WN ++ G ++ + L + M + D FTL++VL + +GK++H
Sbjct: 488 DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH 547
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ G D ++ + S +++MY KC + + F +PV D ++W ++I+GC++NG +
Sbjct: 548 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEE 607
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L F QM + + P + +++ A + LT L G+Q+H ++ + F+ +SL+
Sbjct: 608 RALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLV 667
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I A C+F ++++ +I +W A+++G A HG +A+ LF+QME G+KP+ V
Sbjct: 668 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKV 727
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL+ +A+ Y SM +DYGI P EHY+ +AD LGRAG ++EA I +
Sbjct: 728 TFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDS 787
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ TLL+ACRV + E +VA K+ ++P + AYV+LSN YAAA +W +
Sbjct: 788 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 847
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ +KK P SWIEVKNK + FV D+S+P I + +K+++ ++QEGYV
Sbjct: 848 KLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYV 907
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T L DVEEE+K+ LYYHSE+LA+ FG++ TP T IR+IKNLRVCGDCH A+K+I
Sbjct: 908 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYI 967
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REI++RD +RFH F+DG CSCGDYW
Sbjct: 968 SKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 156/324 (48%), Gaps = 12/324 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
VS+++S N ++ G G Y L M +L+ D T VL + G++
Sbjct: 284 VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ 343
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H A++ GLD + + +SLINMY K ++ + +F + +D ISWNS+IAG Q+ L
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIAS 181
E + F Q+L +KP H + +S++ A + L L L KQ+H I+ + F+++
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+D Y++ ++ A +F + + D+V+W A++ G + H + LF M K G +
Sbjct: 464 ALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERS 522
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADLLGRAGKLQE 297
+ VL C I++ Y I ++ + + D+ + G +
Sbjct: 523 DDFTLATVLKTCGFLFAINQG-----KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 577
Query: 298 AYEFISNMHAGPTENVWLTLLSAC 321
A +F + P + W TL+S C
Sbjct: 578 A-QFAFDSIPVPDDVAWTTLISGC 600
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D V+W T+I G NG E AL++ QM + + PD FT++++ + + +G
Sbjct: 585 IPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 644
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH A++ ++ +G+SL++MYAKC ++D++ LF + + + +WN+++ G Q+
Sbjct: 645 RQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 704
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F+QM IKP V+F ++ AC+H + + + R+ G +
Sbjct: 705 GEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEH 764
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH 206
S L D + G ++ A + D M +
Sbjct: 765 YSCLADALGRAGLVKEAENLIDSMSME 791
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D++ GK H + + + ++LI+MY+KC + + R+F +P +D +SWNSI+A
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120
Query: 116 GCVQN--GLFD---EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
Q+ G+ + E FR + + ++ S ++ C H + + HG +
Sbjct: 121 AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACK 180
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G D + F+A +L+++Y K G ++ R +F++M D+V W ++ G +AI L
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 240
Query: 231 FEQMEKDGVKPNSVAF 246
G+ PN +
Sbjct: 241 SSAFHTSGLHPNEITL 256
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 1 MPVSDLVSWNTVIVGLARN--GLYE---EALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
MP DLVSWN+++ A++ G+ E EA + R + + TLS +L +
Sbjct: 107 MPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 166
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
V + HGYA + GLD + + +L+N+Y K +V++ LF +P +D + WN ++
Sbjct: 167 YVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLK 226
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
++ G +E + + + P ++
Sbjct: 227 AYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 333/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W T+I G +++ +AL QM P+ FTLSSV+ A G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ ++ G D+NV +GS+L+++Y + ++D+ +F L ++ +SWN++IAG +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L+ F+ ML +P H S++S+ AC+ L GK +H +I++G F
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G+I AR IFD++ D+VSW +++ A HG +A+ FE+M + G++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++F++VLTACSH+GL+D+ W Y+ M KD GI P HY V DLLGRAG L A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT +W LL+ACR+HKN EL AE +F +DP++ G +VIL N YA+ R
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW+E++N + FVA D+ HP I +E+L ++++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT V+ V++++++ L YHSE++A+ F ++ TP G+TI I KN+RVCGDCHTA
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK SK+V REIIVRD +RFHHF+DG CSC DYW
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+I+G+ +H + ++ ++ +G++L+NMYAKC +E++ ++F +P +D ++W ++I+G
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+ + L FF QML P + SS++ A A G QLHG ++ GFD N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+LLD+Y + G + A+ +FD ++ + VSW A+I G+A A+ LF+ M +
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
DG +P+ ++ ++ ACS G +++ M K +F + D+ ++G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIH 314
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVH 324
+A + + A W +LL+A H
Sbjct: 315 DARKIFDRL-AKRDVVSWNSLLTAYAQH 341
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 124 DEGLKFFRQMLIAKIKPRHVS----------FSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
DE LKF L+ + + +++++ C L G+ +H I+++ F
Sbjct: 32 DESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIF 91
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
++ + ++LL+MYAKCG++ AR +F+KM D V+WT +I G + H DA+ F Q
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 234 MEKDGVKPNSVAFVAVLTACS 254
M + G PN +V+ A +
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAA 172
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/515 (45%), Positives = 339/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +S+N +I A NG EE+L + R++ F +++L I A+ +++ G
Sbjct: 301 MPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMG 360
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI + V +G+SL++MYAKC + +++R+F L + ++ W ++I+G VQ
Sbjct: 361 RQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQK 420
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++GLK F +M AKI +++SI+ ACA+L +L LGKQLH IIR+G N+F
Sbjct: 421 GLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG 480
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAKCG+I+ A +F +M + + VSW A+I A +G+ A+ FEQM G++
Sbjct: 481 SALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQ 540
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PNSV+F+++L ACSH GL+++ YFNSMT+ Y + P EHYA++ D+L R+G+ EA +
Sbjct: 541 PNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEK 600
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
++ M P E +W ++L++CR+HKN ELA K A+++F M + YV +SN YAAA
Sbjct: 601 LMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAG 660
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W ++ +R +G++K PA SW+E+K K + F A D SHP I L EL ++ME
Sbjct: 661 EWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQME 720
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GY PD+ LH+V+EE K L YHSER+AI F +I TP G+ I ++KNLR C DCH
Sbjct: 721 EQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHA 780
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV REI VRD+SRFHHF DG CSC DYW
Sbjct: 781 AIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 163/322 (50%), Gaps = 6/322 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V++N ++ G ++ G +A+N+ +M ++ +P FT ++VL D+ G
Sbjct: 200 MAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFG 259
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + ++ NV + ++L++ Y+K R+ ++ +LF +P D IS+N +I C N
Sbjct: 260 QQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWN 319
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L+ FR++ + R F++++ A+ L +G+Q+H I + +
Sbjct: 320 GRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVG 379
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKC A IF + V WTA+I G G D + LF +M + +
Sbjct: 380 NSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIG 439
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+S + ++L AC++ + + + + ++ F +A+ D+ + G ++EA +
Sbjct: 440 ADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG-SALVDMYAKCGSIKEALQ 498
Query: 301 FISNMHAGPTEN--VWLTLLSA 320
M P N W L+SA
Sbjct: 499 MFQEM---PVRNSVSWNALISA 517
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 133/251 (52%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +V+W +I G A++ + EA N+ M + PD TL+++L F ++ V +
Sbjct: 99 MVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEV 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ ++ G D+ + + +SL++ Y K + + LF + KD +++N+++ G +
Sbjct: 159 AQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKE 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F +M +P +F++++ A + + G+Q+H +++ F N+F+A
Sbjct: 219 GFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVA 278
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLD Y+K I AR +F +M D +S+ +I A +G +++ LF +++
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFD 338
Query: 241 PNSVAFVAVLT 251
F +L+
Sbjct: 339 RRQFPFATLLS 349
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV +++I Y K + + LF + + ++W +I G Q+ F E F M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ P H++ ++++ +++ Q+HG +++ G+D + + +SLLD Y K ++
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
LA +F M D V++ A++ G + G HDAI+LF +M+ G +P+ F AVLTA
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 41/147 (27%)
Query: 147 SIMPACAHLTTLH-LG---------KQLHGCIIRNGFDDN----------------MFIA 180
+++ +C T LH LG + + +I+ GFD N + A
Sbjct: 2 NLIKSCTRKTHLHNLGTLTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAA 61
Query: 181 SSLLDM---------------YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
L D Y K GN+ AR +FD M +V+WT +I G A H
Sbjct: 62 RKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFL 121
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTA 252
+A +LF M + G+ P+ + +L+
Sbjct: 122 EAFNLFADMCRHGMVPDHITLATLLSG 148
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 325/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+WN++I G A+ G A+++ ++ + PD+ T+ V+P A D+ +G
Sbjct: 491 MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG 550
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCVQ 119
IHG ++ G +++ + ++LI+MYAKC + + LF KD ++WN IIA +Q
Sbjct: 551 TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ 610
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E + F QM + P V+F S++PA A+L G H CII+ GF N +
Sbjct: 611 NGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLV 670
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCG + + +F++MD D VSW A++ G A+HG+ AI+LF M++ V
Sbjct: 671 GNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ +SV+FV+VL+AC HAGL+++ F+SM+ Y I P EHYA + DLLGRAG E
Sbjct: 731 QIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETL 790
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI M P VW LL +CR+H NV+L + + ++P N +V+LS+ YA +
Sbjct: 791 GFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSG 850
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW DA R M + G+KKTP CSW+E+KNK +AF GDKSHP ++ LLE+ME
Sbjct: 851 RWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPD VL +VEEE K+ LY HSERLAI F ++ TP G+TI+I+KNLRVC DCHT
Sbjct: 911 KIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHT 970
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI R IIVRD +RFHHFEDG CSC DYW
Sbjct: 971 TTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 171/316 (54%), Gaps = 1/316 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW T++ G A NG + E L + +M N++ + + S A+ +D+ KGKEIH
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ +D+++ + + L+ MYAKC E + +LF L +D ++W++IIA VQ G +
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F++M K+KP V+ SI+PACA L+ L LGK +H ++ D ++ ++L+
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG A F++M DIV+W ++I G A G+ ++AI +F ++ + P++
Sbjct: 473 SMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAG 532
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V V+ AC+ +D+ + + + G A+ D+ + G L A +
Sbjct: 533 TMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591
Query: 305 MHAGPTENVWLTLLSA 320
E W +++A
Sbjct: 592 TDFTKDEVTWNVIIAA 607
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 148/259 (57%), Gaps = 2/259 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+WN +I GL+++ EA++ R M V ++P S +L ++ P ++
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELC 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHGY R D + + + LI++Y+KC V+ + R+F + +D +SW +++AG N
Sbjct: 250 RSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHN 307
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F E L+ F +M + ++ VS S A A L GK++HGC ++ D ++ +A
Sbjct: 308 GCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVA 367
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MYAKCG A+ +F + D+V+W+A+I G +A+SLF++M+ +K
Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427
Query: 241 PNSVAFVAVLTACSHAGLI 259
PN V +++L AC+ L+
Sbjct: 428 PNRVTLMSILPACADLSLL 446
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 145/261 (55%), Gaps = 2/261 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + WN++I R+ Y EAL + M L+PD +T + VL +++ +G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
HG R GL+ +V IG+ L++MY+K ++ + +F +P +D ++WN++IAG Q+
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E + FFR M + ++P VS ++ P L+ + L + +HG + R F +++
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSN 267
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D+Y+KCG++ +AR +FD+M D VSW ++ G A +G + + LF++M+ V+
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327
Query: 242 NSVAFVAVLTACSHAGLIDKA 262
N V+ V+ A + ++K
Sbjct: 328 NKVSAVSAFLAAAETIDLEKG 348
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH I G + I + LIN+Y+ + + + +F P I WNS+I ++
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + M+ ++P +F+ ++ AC L G HG I R G + ++FI +
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+DMY+K G+++ AR +FDKM D+V+W A+I G + + +A+ F M+ GV+P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 242 NSVAFV 247
+SV+ +
Sbjct: 229 SSVSLL 234
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++ + ++ +C HL L Q+H II +GF + I + L+++Y+ LAR +FD
Sbjct: 32 YLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFD 87
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA-GLID 260
+ W ++I ++A+ ++ M + G++P+ F VL AC+ A L +
Sbjct: 88 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQE 147
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
W F+ G+ A + D+ + G L+ A E M
Sbjct: 148 GVW--FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/511 (44%), Positives = 329/511 (64%), Gaps = 1/511 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++V+WN +I ++ Y+ AL + + +KP+S T +S+L + + GK +
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++ GL++++ + ++L++M+ C + + LF +P +D +SWN+IIAG VQ+G
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+F+ M + IKP ++F+ ++ ACA L G++LH I FD ++ + + L
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY KCG+I A +F K+ ++ SWT++I G A HG +A+ LF QM+++GVKP+
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDW 716
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ FV L+AC+HAGLI++ +F SM K++ I P EHY + DL GRAG L EA EFI
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFII 775
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P VW LL AC+VH NVELA K A+K +DPN+ G +VILSN YAAA WK+
Sbjct: 776 KMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKE 835
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
A +R M ++G+ K P SWIEV K + F + DK+HP I+ L+ L M Q GY
Sbjct: 836 VAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VPDT+ VLHDVE+ +K+ L+YHSERLAI +G++ TP T I I KNLRVCGDCHTA KF
Sbjct: 896 VPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKF 955
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKI +R+II RD++RFHHF+DG CSCGD+W
Sbjct: 956 ISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 194/356 (54%), Gaps = 8/356 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ SWN ++ G ++GLYEEA + QM ++KPD T S+L AD +V KG
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E++ ++ G D ++ +G++LINM+ KC + D+ ++F LP +D ++W S+I G ++
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F + F++M ++P V+F S++ AC H L GK++H + G+D +++
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++L MY KCG++ A +FD + ++VSWTA+I G A HG +A F +M + G++
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+++L ACS + + + + + G A+ + + G L++A+
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ +NV W +++A H+ + A + + I PN+ IL+
Sbjct: 470 VFEKI---SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 223/451 (49%), Gaps = 32/451 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLV+W ++I GLAR+G +++A N+ ++M ++PD S+L + +G
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H G D + +G+++++MY KC +ED+ +F L+ ++ +SW ++IAG Q+
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE FF +M+ + I+P V+F SI+ AC+ + L G+Q+ II G+ + +
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYAKCG+++ A +F+K+ ++V+W A+I H +A++ F+ + K+G+K
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 241 PNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PNS F ++L C + ++ W +F M G+ A+ + G L A
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAK 569
Query: 300 EFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTY 355
++M P ++ W T+++ H ++A + + I P+ + + L N
Sbjct: 570 NLFNDM---PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI-TFTGLLNAC 625
Query: 356 AAARRWKDAASLRVFMRNKG-----------MKKTPACSWIE---------VKNKAYAFV 395
A+ + L + + C IE K Y++
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWT 685
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+ + + R EAL EL +M+QEG PD
Sbjct: 686 SMITGYAQHGRGKEAL-ELFYQMQQEGVKPD 715
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 197/351 (56%), Gaps = 4/351 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D N V+ L++ G + EA+ ++ ++ + +++ T S++L + + ++ G+
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
I+ + + G+ ++ + ++LINMYAKC + ++F + KD SWN ++ G VQ+GL
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++E K QM+ +KP +F S++ ACA + G++L+ I++ G+D ++F+ ++
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++M+ KCG+I A +FD + D+V+WT++I G A HG A +LF++ME++GV+P+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
VAFV++L AC+H +++ M K+ G A+ + + G +++A E +
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALE-V 369
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
++ G W +++ H ++ A K+ I+PN + IL
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 7/278 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ++G + A + + M +KPD T + +L A + +G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H D +V +G+ LI+MY KC +ED+H++F LP K+ SW S+I G Q+
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQH 694
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F QM +KP ++F + ACAH + G + + M
Sbjct: 695 GRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHY 754
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ--MEKD 237
++D++ + G + A KM + D W A++ +H N + L E+ +K
Sbjct: 755 GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLN----VELAEKAAQKKL 810
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ PN +L+ A + K + + D G+
Sbjct: 811 ELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/511 (44%), Positives = 329/511 (64%), Gaps = 1/511 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++V+WN +I ++ Y+ AL + + +KP+S T +S+L + + GK +
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++ GL++++ + ++L++M+ C + + LF +P +D +SWN+IIAG VQ+G
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+F+ M + IKP ++F+ ++ ACA L G++LH I FD ++ + + L
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY KCG+I A +F K+ ++ SWT++I G A HG +A+ LF QM+++GVKP+
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDW 716
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ FV L+AC+HAGLI++ +F SM K++ I P EHY + DL GRAG L EA EFI
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFII 775
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P VW LL AC+VH NVELA K A+K +DPN+ G +VILSN YAAA WK+
Sbjct: 776 KMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKE 835
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
A +R M ++G+ K P SWIEV K + F + DK+HP I+ L+ L M Q GY
Sbjct: 836 VAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VPDT+ VLHDVE+ +K+ L+YHSERLAI +G++ TP T I I KNLRVCGDCHTA KF
Sbjct: 896 VPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKF 955
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKI +R+II RD++RFHHF+DG CSCGD+W
Sbjct: 956 ISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 194/356 (54%), Gaps = 8/356 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ SWN ++ G ++GLYEEA + QM ++KPD T S+L AD +V KG
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E++ ++ G D ++ +G++LINM+ KC + D+ ++F LP +D ++W S+I G ++
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F + F++M ++P V+F S++ AC H L GK++H + G+D +++
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++L MY KCG++ A +FD + ++VSWTA+I G A HG +A F +M + G++
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+++L ACS + + + + + G A+ + + G L++A+
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ +NV W +++A H+ + A + + I PN+ IL+
Sbjct: 470 VFEKI---SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 223/451 (49%), Gaps = 32/451 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLV+W ++I GLAR+G +++A N+ ++M ++PD S+L + +G
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H G D + +G+++++MY KC +ED+ +F L+ ++ +SW ++IAG Q+
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE FF +M+ + I+P V+F SI+ AC+ + L G+Q+ II G+ + +
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYAKCG+++ A +F+K+ ++V+W A+I H +A++ F+ + K+G+K
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 241 PNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PNS F ++L C + ++ W +F M G+ A+ + G L A
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAK 569
Query: 300 EFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTY 355
++M P ++ W T+++ H ++A + + I P+ + + L N
Sbjct: 570 NLFNDM---PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI-TFTGLLNAC 625
Query: 356 AAARRWKDAASLRVFMRNKG-----------MKKTPACSWIE---------VKNKAYAFV 395
A+ + L + + C IE K Y++
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWT 685
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+ + + R EAL EL +M+QEG PD
Sbjct: 686 SMIAGYAQHGRGKEAL-ELFYQMQQEGVKPD 715
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 197/351 (56%), Gaps = 4/351 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D N V+ L++ G + EA+ ++ ++ + +++ T S++L + + ++ G+
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
I+ + + G+ ++ + ++LINMYAKC + ++F + KD SWN ++ G VQ+GL
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++E K QM+ +KP +F S++ ACA + G++L+ I++ G+D ++F+ ++
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++M+ KCG+I A +FD + D+V+WT++I G A HG A +LF++ME++GV+P+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
VAFV++L AC+H +++ M K+ G A+ + + G +++A E +
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALE-V 369
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
++ G W +++ H ++ A K+ I+PN + IL
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 7/278 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ++G + A + + M +KPD T + +L A + +G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H D +V +G+ LI+MY KC +ED+H++F LP K+ SW S+IAG Q+
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQH 694
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F QM +KP ++F + ACAH + G + + M
Sbjct: 695 GRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHY 754
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ--MEKD 237
++D++ + G + A KM + D W A++ +H N + L E+ +K
Sbjct: 755 GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLN----VELAEKAAQKKL 810
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ PN +L+ A + K + + D G+
Sbjct: 811 ELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 329/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +VSW ++ A+NG EAL I QM +++KPD L SVL F D+ +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++ GL+ + SL MYAKC +V + LF + + I WN++I+G +N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F +M+ ++P +S +S + ACA + +L + ++ + R+ + D++FI+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DM+AKCG++ AR +FD+ D+V W+A+I+G LHG A +AISL+ ME+ GV
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L AC+H+G++ + W +FN M D+ I P +HYA V DLLGRAG L +AYE
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P VW LLSAC+ H++VEL A+++F IDP+N G YV LSN YAAAR
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +RV M+ KG+ K CSW+EV+ + AF GDKSHP Y I ++ + R+++
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+V + LHD+ +E+ + L HSER+AI +G+I TP GT +RI KNLR C +CH A
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK+V REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 151/276 (54%), Gaps = 3/276 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + WN +I G +RN +++AL + M + PDSFT +L + + G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
+ +H R G DA+V + + LI +YAKC R+ + +F LP + +SW +I++
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E L+ F QM +KP V+ S++ A L L G+ +H +++ G +
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SL MYAKCG + A+ +FDKM +++ W A+I G A +G A +AI +F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DY 273
V+P++++ + ++AC+ G +++A S + + + DY
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + GL + + + LI+ + + + ++F LP WN+II G +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + L + M +A++ P +F ++ AC+ L+ L +G+ +H + R GFD ++F+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+ +YAKC + AR +F+ + L + IVSWTA++ A +G +A+ +F QM K
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ VA V+VL A + + + S S+ K G+ + ++ + + G++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
M + P +W ++S
Sbjct: 277 KILFDKMKS-PNLILWNAMISG 297
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++S++ + H L KQ+H ++ G + F+ + L+ + G+I AR +FD +
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
I W A+I G + + + DA+ ++ M+ V P+S F +L ACS
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 338/510 (66%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL WN ++ G ++AL + + K D TL++ V + +GK+IH
Sbjct: 1071 DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIH 1130
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+AI+ G D+++ + S +++MY KC + ++ +F + D ++W S+I+GCV NG D
Sbjct: 1131 AHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNED 1190
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ + +M +++ P +F++++ A + +T L G+QLH +I+ + F+ +SL+
Sbjct: 1191 QALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLV 1250
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI A +F KM++ +I W A+++G A HGNA +A++LF+ M+ G++P+ V
Sbjct: 1251 DMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRV 1310
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+F+ +L+ACSHAGL +A+ Y +SM DYGI P EHY+ + D LGRAG +QEA + I
Sbjct: 1311 SFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIET 1370
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + ++ LL ACR+ +VE +VA ++F ++P + AYV+LSN YAAA RW D
Sbjct: 1371 MPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDV 1430
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ K +KK P SWI+VKN + FV D+SHP I + ++E+++ + ++GYV
Sbjct: 1431 TDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYV 1490
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ VL DVE+E+K+ LYYHSE+LAI +G+I TP TTIR+IKNLRVCGDCH AIK+I
Sbjct: 1491 PDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYI 1550
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ +REI++RD +RFHHF DG CSCGDYW
Sbjct: 1551 SKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 184/351 (52%), Gaps = 5/351 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK-GKEI 63
DL+SWN++I A++ L EE++N+ + + LKPD FTL+SVL + +D + ++I
Sbjct: 969 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQI 1028
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H +A++ G A+ + ++LI++Y+K ++E++ LF D WN+++ G +
Sbjct: 1029 HVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG 1088
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L+ F + + K ++ ++ AC L L GKQ+H I+ GFD ++ + S +
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 1148
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
LDMY KCG++ A +F+ + D V+WT++I G +GN A+ ++ +M + V P+
Sbjct: 1149 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 1208
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
F ++ A S +++ ++ K ++ F + V D+ + G +++AY
Sbjct: 1209 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLV-DMYAKCGNIEDAYRLFK 1267
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKV--AEKIFMIDPNNMGAYVILS 352
M+ +W +L H N E A + + K I+P+ + ILS
Sbjct: 1268 KMNVRNIA-LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 1317
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 165/334 (49%), Gaps = 3/334 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ WN + G A+ M +N+ D+ TL VL A D+ GK++H
Sbjct: 868 DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ GLD++V + +SL+NMY+K + +F + D ISWNS+I+ C Q+ L +
Sbjct: 928 GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSL 183
E + F +L +KP H + +S++ AC+ L L++ +Q+H ++ G + F+A++L
Sbjct: 988 ESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTL 1047
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+D+Y+K G + A +F D D+ W A++ G + + A+ LF + K G K +
Sbjct: 1048 IDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQ 1107
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ AC L+D+ K G + + D+ + G + A +
Sbjct: 1108 ITLATAAKACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCGDMVNA-GIVF 1165
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
N + P + W +++S C + N + A ++ ++
Sbjct: 1166 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 1199
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 107/213 (50%), Gaps = 5/213 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+++ GK H + G + + ++L+ MY+KC + + ++F P +D ++WN+I+
Sbjct: 636 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 695
Query: 116 GCV-----QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+G EGL FR + + ++ + ++ C + L + +HG I+
Sbjct: 696 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 755
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G + ++F++ +L+++Y+KCG +R AR +FD M D+V W ++ G G +A L
Sbjct: 756 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 815
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
F + + G++P+ + +L S + W
Sbjct: 816 FSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 2 PVSDLVSWNTVIVGLA-----RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
P DLV+WN ++ A +G +E L++ R + TL+ VL + +
Sbjct: 683 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 742
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ + +HGYAI+ GL+ +V + +L+N+Y+KC R+ D+ LF + +D + WN ++ G
Sbjct: 743 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 802
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
VQ GL E + F + + ++P S I+
Sbjct: 803 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLIL 835
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++ WN ++VGLA++G EEA+N+ + M + ++PD + +L + +
Sbjct: 1269 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 1328
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN-SIIAGCV 118
E +H +G++ + S L++ + V+++ ++ +P K + S N +++ C
Sbjct: 1329 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 1388
Query: 119 QNGLFDEG 126
G + G
Sbjct: 1389 IQGDVETG 1396
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 340/514 (66%), Gaps = 2/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW +I G +++G EAL + +M ++ +P+ FTLSS+L G
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++++G D NV +GSSL++MYA+ A + ++ +F L K+ +SWN++IAG +
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + ++ F QML +P H ++SS++ ACA +L GK +H +I++G +I
Sbjct: 286 GEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIG 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAK G+I+ A+ +F ++ DIVSW ++I G A HG +A+ LFEQM K V+
Sbjct: 345 NTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQ 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F++VLTACSH+GL+D+ YF M K + I H+ V DLLGRAG+L EA +
Sbjct: 405 PNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANK 463
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL ACR+HKN++L AE+IF +DP++ G +V+LSN YA+A R
Sbjct: 464 FIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGR 523
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
DAA +R M+ G+KK PACSW+E++N+ + FVA D SHP I +++ ++++
Sbjct: 524 LSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKE 583
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL + ++ ++ L YHSE+LA+ F ++ TP G TIRI KN+R+CGDCH+A
Sbjct: 584 IGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSA 643
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF S+++ REIIVRD +RFHHF G CSC DYW
Sbjct: 644 FKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 138/263 (52%), Gaps = 2/263 (0%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
+L+P+ S +L + +G+ IH + + ++ + + ++NMYAKC +E++
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
LF +P KD +SW +I+G Q+G E L F +ML +P + SS++ A
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ H G+QLH ++ G+D N+ + SSLLDMYA+ ++R A+ IF+ + ++VSW A+I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G+A G + LF QM + G +P + +VL S L W + + + G
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKS--GG 337
Query: 276 APSFEHYAAVADLLGRAGKLQEA 298
P + D+ ++G +++A
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDA 360
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 336/510 (65%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL SWN ++ G + Y EAL + M K D T ++ V + +GK+IH
Sbjct: 464 DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ ++ + S +++MY KC ++ + ++F +P D ++W ++I+GCV+NG +
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L + QM +A ++P +F++++ AC+ LT L GKQ+H I++ + F+ +SL+
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLV 643
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI A +F +M+ + W A+I+G A HGNA +A++ F +M+ GV P+ V
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRV 703
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL A+ F+SM K YG+ P EHY+ + D L RAG +QEA + +S+
Sbjct: 704 TFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS 763
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + ++ TLL+ACRV + E +VAEK+F +DP++ AYV+LSN YAAA +W++A
Sbjct: 764 MPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENA 823
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
S R M+ +KK P SWI++KNK + FVAGD+SH I ++ +++R+++EGYV
Sbjct: 824 VSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYV 883
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ L D+EEE K++ L YHSE+LAI +G++ TP TT+R+IKNLRVCGDCH AIK+I
Sbjct: 884 PDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYI 943
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + QREI++RD +RFHHF G CSCGDYW
Sbjct: 944 SNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 164/325 (50%), Gaps = 15/325 (4%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
SD+ WN + + G EA++ R M + DS T +L + A + GK+I
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG +R G D V + +S INMY K V + R+F + D ISWN++I+GC ++GL
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH-LGKQLHGCIIRNGFDDNMFIASS 182
+ L+ F +L + + P + +S++ AC+ L + +G+Q+H C ++ G + F++++
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTA 439
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+D+Y+K G + A +F D D+ SW A++ G + N +A+ LF M + G K +
Sbjct: 440 LIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKAD 499
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE-HY-----AAVADLLGRAGKLQ 296
+ F A AG + + + + + HY + + D+ + G+++
Sbjct: 500 QITFA---NAAKAAGCLVR----LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMK 552
Query: 297 EAYEFISNMHAGPTENVWLTLLSAC 321
A + + N P + W T++S C
Sbjct: 553 SARK-VFNQIPSPDDVAWTTVISGC 576
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 29/299 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIK 59
MPV D+V WN ++ G +E L + L+PD ++ ++L + V +
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE 242
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+++ YA + LF D WN ++ +Q
Sbjct: 243 LEQVRAYATK----------------------------LFVCDDDSDVTVWNKTLSSYLQ 274
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E + FR M+ +++ +++ I+ A L L LGKQ+HG ++R G+D + +
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSV 334
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+S ++MY K G++ AR +F +M D++SW VI G A G ++ LF + + G+
Sbjct: 335 ANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGL 394
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ +VL ACS ++ GI A+ D+ + GK++EA
Sbjct: 395 LPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V+W TVI G NG E+AL QM ++PD +T ++++ + + +G
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQG 620
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH ++ + + +SL++MYAKC +ED++ LF + + WN++I G Q+
Sbjct: 621 KQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQH 680
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMFI 179
G +E L FF +M + P V+F ++ AC+H T K G + +
Sbjct: 681 GNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEH 740
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM 203
S L+D ++ G+I+ A + M
Sbjct: 741 YSCLVDALSRAGHIQEAEKVVSSM 764
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 41 SFTLSSVLPIFADYV-------DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE 93
S + SS+LP + + D+I GK H + GL+ + + ++LI MYAKC +
Sbjct: 6 SVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLF 65
Query: 94 DSHRLFCLLPV--KDAISWNSIIAGCVQNG-LFD-----EGLKFFRQMLIAKIKPRHVSF 145
+ +LF + P +D +++N+I+A G L D E FR + + + +
Sbjct: 66 SARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTL 125
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S + C + + L G ++ G ++F+A +L+++YAK IR AR +FD+M +
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
D+V W ++ G + + LF + G++P+ V+ +L + ++
Sbjct: 186 RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFER 241
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 44/282 (15%)
Query: 5 DLVSWNTVIVGLARNG-LYE-----EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
DLV++N ++ A G L++ EA +I R + + TLS + + Y
Sbjct: 80 DLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPS 139
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ + GYA++ GL +V + +L+N+YAK R+ ++ LF +PV+D + WN ++ V
Sbjct: 140 ASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYV 199
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G DE L F + ++P VS +I+ T ++L + +F
Sbjct: 200 EMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE--RELEQV---RAYATKLF 254
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ D D+ W + G +A+ F M K
Sbjct: 255 VCD----------------------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSR 292
Query: 239 VKPNSVAFVAVLTACS-----------HAGLIDKAWSYFNSM 269
V +S+ ++ +L+ + H ++ W F S+
Sbjct: 293 VPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSV 334
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/522 (45%), Positives = 340/522 (65%), Gaps = 15/522 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWNT+I +++ + EAL R M ++ D T++SVLP + + GKEIH
Sbjct: 178 DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIH 237
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
Y +R+ L N +GS+L++MY C +VE R+F + + WN++I+G +NGL
Sbjct: 238 AYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLD 297
Query: 124 DEGLKFFRQML-IAKIKPRHVSFSSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++ L F +M+ +A + P + +S+MPAC H L + GK++H IRN ++ + S
Sbjct: 298 EKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGS 357
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG--- 238
+L+DMYAKCG + L+R +F++M ++++W +IM +HG +A+ LF+ M +
Sbjct: 358 ALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRG 417
Query: 239 --VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
KPN V F+ V ACSH+GLI + + F M D+G+ P+ +HYA V DLLGRAG+L+
Sbjct: 418 GEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLE 477
Query: 297 EAYEFISNMHAGPTE----NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
EAYE ++ M P E W +LL ACR+H+NVEL A+ + ++PN YV+LS
Sbjct: 478 EAYELVNTM---PAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLS 534
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N Y++A W A +R MR G+KK P CSWIE +++ + F+AGD SHP +++ L+
Sbjct: 535 NIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLE 594
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
L E+M +EGYVPDT VLH+V+E++K+NLL HSE+LAI FGI+ TP GTTIR+ KNLR
Sbjct: 595 TLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 654
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
VC DCH A KFISKI++REIIVRD RFHHF++G CSCGDYW
Sbjct: 655 VCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 177/360 (49%), Gaps = 40/360 (11%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P SW + R+ + EA++ +M +PD+F +VL + D+ G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 62 EIHGYAIRHGL-DANVCIGSSLINMYAKCA--------------------RVEDSHRLFC 100
+IH A++ G ++V + ++L+NMY KC RV+DS LF
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
+D +SWN++I+ Q+ F E L FFR M++ ++ V+ +S++PAC+HL L +
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 161 GKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
GK++H ++RN +N F+ S+L+DMY C + R +FD + I W A+I G A
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 220 LHGNAHDAISLFEQMEK-DGVKPNSVAFVAVLTACSHA------GLIDKAWSYFNSMTKD 272
+G A+ LF +M K G+ PN+ +V+ AC H+ G A++ N + D
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
+ +A+ D+ + G L + + M P +NV W L+ AC +H E A
Sbjct: 353 ITVG------SALVDMYAKCGCLNLSRRVFNEM---PNKNVITWNVLIMACGMHGKGEEA 403
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-----GNVNLKPDSFTLSSVLPIFADYV 55
MP ++++WN +I+ +G EEAL + + M KP+ T +V +
Sbjct: 379 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438
Query: 56 DVIKGKEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAI- 108
+ +G + H + + D C+ +++ + ++E+++ L +P + D +
Sbjct: 439 LISEGLNLFYRMKHDHGVEPTSDHYACV----VDLLGRAGQLEEAYELVNTMPAEFDKVG 494
Query: 109 SWNSIIAGC 117
+W+S++ C
Sbjct: 495 AWSSLLGAC 503
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/510 (44%), Positives = 329/510 (64%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +SW +I GL +NGL EAL++ R+M D FT SVL + + +GK+IH
Sbjct: 234 DSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIH 293
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y IR NV +GS+L++MY+KC ++ + +F +P K+ ISW +++ G QNG +
Sbjct: 294 AYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSE 353
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E +K F +M ++P + S++ +CA+L +L G Q H + +G + ++++L+
Sbjct: 354 EAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALI 413
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+ + +F +M++ D VSWTA++ G A G A++ I LFE+M G+KP+ V
Sbjct: 414 TLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGV 473
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACS AGL++K YF SM K++GI P +H + DLLGRAG+L+EA FI+N
Sbjct: 474 TFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINN 533
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLS+CRVH ++E+ A+ + ++P N +YV+LS+ YA+ +W
Sbjct: 534 MPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKV 593
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR+K ++K P SWI+ K K + F A D+S PF +I L++L +M +EGYV
Sbjct: 594 AQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYV 653
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD VLHDVEE +K +L +HSE+LAI FG+I P G IR+IKNLRVCGDCH A KFI
Sbjct: 654 PDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFI 713
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI QREI+VRD RFH F+DG CSCGD+W
Sbjct: 714 SKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 184/352 (52%), Gaps = 34/352 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VSWN I G A G +A+ + + M + + + T S++L + + + V
Sbjct: 97 MPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDL 156
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
G++I+G ++ G ++V +GS L++MY K
Sbjct: 157 GRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMR 216
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +E+S RLFC L +D+ISW +I G +QNGL E L FR+M +A +F S+
Sbjct: 217 CGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSV 276
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC L L GKQ+H +IR DN+F+ S+L+DMY+KC +I+ A +F +M ++
Sbjct: 277 LTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNV 336
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWTA+++G +G + +A+ +F +M+++GV+P+ +V+++C++ +++ + F+
Sbjct: 337 ISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG-AQFHC 395
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
G+ A+ L G+ G + ++ + M+ E W LL+
Sbjct: 396 RALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI-RDEVSWTALLAG 446
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 124/225 (55%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW ++VG +NG EEA+ I +M ++PD FTL SV+ A+ + +G
Sbjct: 331 MPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG 390
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H A+ GL + + + ++LI +Y KC E+SHRLF + ++D +SW +++AG Q
Sbjct: 391 AQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQF 450
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G +E + F +ML +KP V+F ++ AC+ + G Q +I+ +G +
Sbjct: 451 GKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDH 510
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ ++D+ + G + AR + M H D+V W ++ +HG+
Sbjct: 511 CTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGD 555
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 32/206 (15%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKI 138
++++++Y+K + ++F L+P +D +SWN I+G G + ++ ++ ML A +
Sbjct: 75 NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
++FS+++ C+ + LG+Q++G I++ GF ++F+ S L+DMY K G I A+
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194
Query: 199 IFDKMDLHDIV-------------------------------SWTAVIMGNALHGNAHDA 227
FD+M ++V SWT +I G +G +A
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254
Query: 228 ISLFEQMEKDGVKPNSVAFVAVLTAC 253
+ +F +M G + F +VLTAC
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTAC 280
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 36/201 (17%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK-- 202
++S++ C K+LH I++ F++++L+ Y K GN+ A +FD
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 203 -----------------------------MDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
M D VSW I G A +G+ DA+ +++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 234 MEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
M KD + N + F +L CS +D N +G + + D+ +
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLG-RQINGQILKFGFGSDVFVGSPLVDMYTKL 186
Query: 293 GKLQEAYEFISNMHAGPTENV 313
G + +A + M P NV
Sbjct: 187 GLIYDAKRYFDEM---PERNV 204
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 219/512 (42%), Positives = 337/512 (65%), Gaps = 1/512 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +VSW + I R GLY +A+ + +M + ++PD +T++S++ A + KG
Sbjct: 632 MGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 691
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y I++G+ +N+ + ++LINMYAKC VE++ +F +PVKD +SWN++I G QN
Sbjct: 692 RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 751
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L+ F M + KP ++ + ++PACA L L G+++HG I+R G+ ++ +A
Sbjct: 752 SLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVA 810
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+L+DMYAKCG + LA+ +FD + D++SWT +I G +HG ++AIS F +M G++
Sbjct: 811 CALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE 870
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ +F +L ACSH+GL+++ W +FNSM + G+ P EHYA V DLL R G L +AY+
Sbjct: 871 PDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYK 930
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P +W LLS CR+H +V+LA KVAE IF ++P+N YV+L+N YA A +
Sbjct: 931 FIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEK 990
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ LR M+ +G K+ P CSWIEV K FVAG+ HP RI+ L++L +M+
Sbjct: 991 WEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQN 1050
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
E Y + VL + ++ +K+ + HSE+ A+ FGI+ P G T+R+ KN RVCGDCH
Sbjct: 1051 EDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEM 1110
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
KF+SK +REI++RD++RFHHF+DG CSC D
Sbjct: 1111 GKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 173/314 (55%), Gaps = 6/314 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ A+ G + E++++ ++M + + + +T + VL FA V + K +HGY +
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 497
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +N + +SLI Y K VE +H LF L D +SWNS+I GCV NG GL+
Sbjct: 498 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 557
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QMLI ++ + S++ A A++ L LG+ LHG ++ F + + +++LLDMY+
Sbjct: 558 IFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 617
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ A +F KM IVSWT+ I G DAI LF++M+ GV+P+ +
Sbjct: 618 KCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 677
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
++ AC+ + +DK + + K+ G+ + A+ ++ + G ++EA S +
Sbjct: 678 IVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKI--- 733
Query: 309 PTENV--WLTLLSA 320
P +++ W T++
Sbjct: 734 PVKDIVSWNTMIGG 747
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 188/369 (50%), Gaps = 8/369 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G NG L I QM + ++ D TL SVL +A+ ++ G+ +H
Sbjct: 535 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALH 594
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ V ++L++MY+KC + + +F + +SW S IA V+ GL+
Sbjct: 595 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYS 654
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M ++P + +SI+ ACA ++L G+ +H +I+NG N+ + ++L+
Sbjct: 655 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI 714
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MYAKCG++ AR +F K+ + DIVSW +I G + + ++A+ LF M+K KP+ +
Sbjct: 715 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDI 773
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
VL AC+ +DK + + G A+ D+ + G L A + + +
Sbjct: 774 TMACVLPACAGLAALDKGREIHGHILRR-GYFSDLHVACALVDMYAKCGLLVLA-QLLFD 831
Query: 305 MHAGPTENVWLTLLSACRVH--KNVELAGKVAEKIFMIDPNNMGAYVIL---SNTYAAAR 359
M W +++ +H N ++ +I I+P+ VIL S++
Sbjct: 832 MIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNE 891
Query: 360 RWKDAASLR 368
WK S+R
Sbjct: 892 GWKFFNSMR 900
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 14/316 (4%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N I G A+ ++ + + L +S+ SVL + A+ + GK +H I
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G+ + +G+ L+ MY C + ++F + WN +++ + G F E +
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M + +F+ ++ A L + K++HG +++ GF N + +SL+ Y K
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
G + A +FD++ D+VSW ++I G ++G + + + +F QM GV+ + V+V
Sbjct: 518 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 577
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEAYEFISNM 305
L A ++ G + +G+ F + D+ + G L A E M
Sbjct: 578 LVAWANIGNLS-----LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Query: 306 HAGPTENV-WLTLLSA 320
G T V W + ++A
Sbjct: 633 --GDTTIVSWTSTIAA 646
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 324/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+WN++I G A+ G A+++ ++ + PD+ T+ V+P A D+ +G
Sbjct: 491 MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG 550
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCVQ 119
IHG ++ G +++ + ++LI+MYAKC + + LF KD ++WN IIA +Q
Sbjct: 551 TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ 610
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E + F QM + P V+F S++PA A+L G H CII+ GF N +
Sbjct: 611 NGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLV 670
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCG + + +F++MD D VSW A++ G A+HG+ AI+LF M++ V
Sbjct: 671 GNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ +SV+FV+VL+AC H GL+++ F+SM+ Y I P EHYA + DLLGRAG E
Sbjct: 731 QIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETL 790
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI M P VW LL +CR+H NV+L + + ++P N +V+LS+ YA +
Sbjct: 791 GFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSG 850
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW DA R M + G+KKTP CSW+E+KNK +AF GDKSHP ++ LLE+ME
Sbjct: 851 RWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPD VL +VEEE K+ LY HSERLAI F ++ TP G+TI+I+KNLRVC DCHT
Sbjct: 911 KIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHT 970
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI R IIVRD +RFHHFEDG CSC DYW
Sbjct: 971 TTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 171/316 (54%), Gaps = 1/316 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW T++ G A NG + E L + +M N++ + + S A+ +D+ KGKEIH
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ +D+++ + + L+ MYAKC E + +LF L +D ++W++IIA VQ G +
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F++M K+KP V+ SI+PACA L+ L LGK +H ++ D ++ ++L+
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG A F++M DIV+W ++I G A G+ ++AI +F ++ + P++
Sbjct: 473 SMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAG 532
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V V+ AC+ +D+ + + + G A+ D+ + G L A +
Sbjct: 533 TMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591
Query: 305 MHAGPTENVWLTLLSA 320
E W +++A
Sbjct: 592 TDFTKDEVTWNVIIAA 607
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 148/259 (57%), Gaps = 2/259 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+WN +I GL+++ EA++ R M V ++P S +L ++ P ++
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELC 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHGY R D + + + LI++Y+KC V+ + R+F + +D +SW +++AG N
Sbjct: 250 RSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHN 307
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F E L+ F +M + ++ VS S A A L GK++HGC ++ D ++ +A
Sbjct: 308 GCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVA 367
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MYAKCG A+ +F + D+V+W+A+I G +A+SLF++M+ +K
Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427
Query: 241 PNSVAFVAVLTACSHAGLI 259
PN V +++L AC+ L+
Sbjct: 428 PNRVTLMSILPACADLSLL 446
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 145/261 (55%), Gaps = 2/261 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + WN++I R+ Y EAL + M L+PD +T + VL +++ +G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
HG R GL+ +V IG+ L++MY+K ++ + +F +P +D ++WN++IAG Q+
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E + FFR M + ++P VS ++ P L+ + L + +HG + R F +++
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSN 267
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D+Y+KCG++ +AR +FD+M D VSW ++ G A +G + + LF++M+ V+
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327
Query: 242 NSVAFVAVLTACSHAGLIDKA 262
N V+ V+ A + ++K
Sbjct: 328 NKVSAVSAFLAAAETIDLEKG 348
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH I G + I + LIN+Y+ + + + +F P I WNS+I ++
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + M+ ++P +F+ ++ AC L G HG I R G + ++FI +
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+DMY+K G+++ AR +FDKM D+V+W A+I G + + +A+ F M+ GV+P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 242 NSVAFV 247
+SV+ +
Sbjct: 229 SSVSLL 234
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++ + ++ +C HL L Q+H II +GF + I + L+++Y+ LAR +FD
Sbjct: 32 YLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFD 87
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA-GLID 260
+ W ++I ++A+ ++ M + G++P+ F VL AC+ A L +
Sbjct: 88 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQE 147
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
W F+ G+ A + D+ + G L+ A E M
Sbjct: 148 GVW--FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/514 (45%), Positives = 335/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSWN++I G +NG A+ I ++M + ++ + T+ L AD DV +G
Sbjct: 337 MTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG 396
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + L ++V + +SLI+MY+KC RV+ + +F L K +SWN++I G QN
Sbjct: 397 RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQN 456
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + +F +M + IKP + S++PA A L+ L K +HG +IR D N+F+A
Sbjct: 457 GRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVA 516
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +FD MD + +W A+I G HG A+ LFE+M+K+ +K
Sbjct: 517 TALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIK 576
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ VL+ACSH+GL+++ + YF SM KDYG+ P+ +HY A+ DLLGRA +L EA++
Sbjct: 577 PNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWD 636
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +V+ +L ACR+HKNVEL K A +IF +DP++ G +V+L+N YA A
Sbjct: 637 FIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASM 696
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M KG++KTP S +E++N+ + F +G SHP +I L+ L R++
Sbjct: 697 WDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKA 756
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+PDT V HDVE+ K+ LL HSE+LAI F ++ T GTTI + KNLRVCGDCH A
Sbjct: 757 AGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNA 815
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS + +REIIVRD RFHHF+DG CSCGDYW
Sbjct: 816 TKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 190/354 (53%), Gaps = 4/354 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV WNT+I G A+NG + AL +V +M +PDS T+ S+LP AD + G
Sbjct: 236 MPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIG 295
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHGY++R G ++ V + ++L++MY+KC V + +F + K +SWNS+I G VQN
Sbjct: 296 RSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQN 355
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ F++M+ +++ +V+ + ACA L + G+ +H + + ++ +
Sbjct: 356 GDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVM 415
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+KC + +A IF+ + +VSW A+I+G A +G ++AI F +M+ +K
Sbjct: 416 NSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIK 475
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S V+V+ A + ++ +A + + + + + A+ D+ + G + A +
Sbjct: 476 PDSFTMVSVIPALAELSVLPQA-KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
M W ++ H + A ++ EK+ +I PN + +LS
Sbjct: 535 LFDMMDERHV-TTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLS 587
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 158/263 (60%), Gaps = 2/263 (0%)
Query: 2 PVSDLVS--WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
P+ D + ++T++ G ARN ++A++ +M ++P + + +L + D D+ K
Sbjct: 134 PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRK 193
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIH I +G +NV + ++NMYAKC VE+++++F +P +D + WN+II+G Q
Sbjct: 194 GKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQ 253
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG L+ +M +P ++ SI+PA A + +L +G+ +HG +R GF+ + +
Sbjct: 254 NGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNV 313
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L+DMY+KCG++ AR IFD+M +VSW ++I G +G+ A+ +F++M + V
Sbjct: 314 STALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQV 373
Query: 240 KPNSVAFVAVLTACSHAGLIDKA 262
+ +V + L AC+ G +++
Sbjct: 374 EMTNVTVMGALHACADLGDVEQG 396
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 137/267 (51%), Gaps = 17/267 (6%)
Query: 61 KEIHGYA---IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS--WNSIIA 115
KE+H + I++GL + + L++++ K + ++ R+F P++D I +++++
Sbjct: 91 KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVF--QPIEDKIDELYHTMLK 148
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G +N D+ + FF +M ++P +F+ ++ C L GK++H +I NGF
Sbjct: 149 GYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFAS 208
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F + +++MYAKC + A +FD+M D+V W +I G A +G A+ L +M+
Sbjct: 209 NVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQ 268
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGR 291
++G +P+S+ V++L A + G + S Y + FE + A+ D+ +
Sbjct: 269 EEGKRPDSITIVSILPAVADVGSLRIGRS-----IHGYSMRAGFESFVNVSTALVDMYSK 323
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLL 318
G + A I + G T W +++
Sbjct: 324 CGSVGTA-RLIFDRMTGKTVVSWNSMI 349
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/541 (43%), Positives = 337/541 (62%), Gaps = 31/541 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWNT+I G A+NG +EA RQ+ + + D FT ++++ + V +
Sbjct: 240 MKVRDVVSWNTIITGYAQNGEIDEA----RQLFDESPVHDVFTWTAMVSGYIQNRMVEEA 295
Query: 61 KEIH----------------GYAIRHGLDA-----------NVCIGSSLINMYAKCARVE 93
+E+ GY ++ NV +++I YA+C ++
Sbjct: 296 RELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKIS 355
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ LF +P +D +SW ++IAG Q+G E L+ F M + SFSS + CA
Sbjct: 356 EAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCA 415
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L LGKQLHG +++ G++ F+ ++LL MY KCG+I A +F +M DIVSW
Sbjct: 416 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 475
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G + HG +A+ FE M+++G+KP+ VAVL+ACSH GL+DK YF++MT+DY
Sbjct: 476 MIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDY 535
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G+ P+ +HYA + DLLGRAG L+EA+ + NM P +W TLL A RVH N ELA
Sbjct: 536 GVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETA 595
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+KIF ++P N G YV+LSN YA++ RW D LRV MR+KG+KK P SWIE++NK +
Sbjct: 596 ADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHT 655
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD+ HP I L++L RM++ GYV T VLHDVEEE+K+ ++ YHSERLA+
Sbjct: 656 FSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVA 715
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+GI+ G IR+IKNLRVC DCH AIK+++K+ R II+RDN+RFHHF+DG CSCGDY
Sbjct: 716 YGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDY 775
Query: 514 W 514
W
Sbjct: 776 W 776
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 176/383 (45%), Gaps = 47/383 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP---------IF 51
MP D+ SWNT++ G A+NG ++A + +M N + LS+ + +F
Sbjct: 147 MPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF 206
Query: 52 ADYVD------------VIKGKEIHGYAIRHGLDA----NVCIGSSLINMYAKCARVEDS 95
+ +K K+I R D+ +V +++I YA+ ++++
Sbjct: 207 GSRENWALVSWNCLLGGFVKKKKI--VEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEA 264
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+LF PV D +W ++++G +QN + +E + F +M + VS+++++
Sbjct: 265 RQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNEVSWNAMLAGYVQG 320
Query: 156 TTLHLGKQLHGCIIRNGFD----DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
+ + K+L FD N+ ++++ YA+CG I A+ +FDKM D VSW
Sbjct: 321 ERVEMAKEL--------FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 372
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I G + G++++A+ LF ME++G + N +F + L+ C+ ++ + K
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
F A + + + G ++EA + M AG W T+++ H E A
Sbjct: 433 GGYETGCFVGNALLL-MYCKCGSIEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEEAL 490
Query: 332 KVAEKIFM--IDPNNMGAYVILS 352
+ E + + P++ +LS
Sbjct: 491 RFFESMKREGLKPDDATMVAVLS 513
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 22/270 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP VS+N +I G RNG +E A + +M +L + + ++ + ++ K
Sbjct: 85 MPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDL----VSWNVMIKGYVRNRNLGKA 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ + +VC +++++ YA+ V+D+ R+F +P K+ +SWN++++ VQN
Sbjct: 141 REL----FERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQN 196
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
+E F ++ VS++ ++ + +Q + +R+ N I
Sbjct: 197 SKLEEACVLFG----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTII 252
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
YA+ G I AR +FD+ +HD+ +WTA++ G + +A LF++M
Sbjct: 253 TG-----YAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP---- 303
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+ N V++ A+L ++ A F+ M
Sbjct: 304 ERNEVSWNAMLAGYVQGERVEMAKELFDVM 333
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 164/384 (42%), Gaps = 74/384 (19%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D+++ + I+ Y + R ++ R+F +P ++S+N++I+G ++NG F+ +
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFE-----LAR 110
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML ++ R + ++M ++ +LGK + + ++ +++L YA+ G
Sbjct: 111 MLFDEMPERDLVSWNVMIK-GYVRNRNLGKARE--LFERMPERDVCSWNTILSGYAQNGC 167
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK---------------- 236
+ AR +FD+M + VSW A++ + +A LF E
Sbjct: 168 VDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKK 227
Query: 237 ----------DGVK-PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
D +K + V++ ++T + G ID+A F+ +P + +
Sbjct: 228 KKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE-------SPVHDVFTWT 280
Query: 286 ADLLG--RAGKLQEAYEFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFMID 341
A + G + ++EA E M P N W +L+ + VE+ A+++F +
Sbjct: 281 AMVSGYIQNRMVEEARELFDRM---PERNEVSWNAMLAGYVQGERVEM----AKELFDVM 333
Query: 342 P-NNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG--D 398
P N+ + + YA + +A +L F + M K SW A +AG
Sbjct: 334 PCRNVSTWNTMITGYAQCGKISEAKNL--FDK---MPKRDPVSWA-------AMIAGYSQ 381
Query: 399 KSHPFYHRINEALKELLERMEQEG 422
H + EAL+ L ME+EG
Sbjct: 382 SGHSY-----EALR-LFVLMEREG 399
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/514 (43%), Positives = 331/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SW +I GLA++G EAL + ++M ++P+ T +S+L + + G
Sbjct: 389 MVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWG 448
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + GL + +G++L+NMY+ C V+D+ ++F + +D +++N++I G +
Sbjct: 449 RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAH 508
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L E LK F ++ +KP V++ +++ ACA+ +L +++H + + GF + +
Sbjct: 509 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVG 568
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAKCG+ A +F+KM +++SW A+I G+A HG DA+ LFE+M+ +GVK
Sbjct: 569 NALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVK 628
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V FV++L+ACSHAGL+++ YF SM++D+ I P+ EHY + DLLGRAG+L EA
Sbjct: 629 PDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEA 688
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M +W LL ACR+H NV +A + AE +D +N YV LS+ YAAA
Sbjct: 689 LIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGM 748
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA LR M +G+ K P SWI+V +K + FVA D+SHP +I L L M+
Sbjct: 749 WDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKM 808
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GYVPDT+ V+HDV+E +K+N + +HSERLAI +G+I TP GT I I KNLRVC DCHTA
Sbjct: 809 KGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTA 868
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REII RD +RFHHF+DG CSCGDYW
Sbjct: 869 TKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 225/464 (48%), Gaps = 58/464 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSW I G A G E A I ++M + P+ T SVL F+ + G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + G +++ +G++L+ MYAKC +D ++F L +D I+WN++I G +
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E + + QM + P +++ ++ AC + LH GK++H + + GF ++ +
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY++CG+I+ AR +FDKM D++SWTA+I G A G +A++++++M++ GV+
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 241 PNSVAFVAVLTACS----------------HAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
PN V + ++L ACS AGL A N++ Y + S +
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA-HVGNTLVNMYSMCGSVKDARQ 485
Query: 285 VADLL-------------GRAGK--LQEAYEFISNMHA---GPTENVWLTLLSACRVHKN 326
V D + G A +EA + + P + ++ +L+AC +
Sbjct: 486 VFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGS 545
Query: 327 VELAGKVAEKI----FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPAC 382
+E A ++ + F D + A V +TYA + DA+ VF + M K
Sbjct: 546 LEWAREIHTLVRKGGFFSDTSVGNALV---STYAKCGSFSDASI--VFEK---MTKRNVI 597
Query: 383 SWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
SW A + G H R +AL +L ERM+ EG PD
Sbjct: 598 SW-------NAIIGGSAQHG---RGQDAL-QLFERMKMEGVKPD 630
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 213/461 (46%), Gaps = 66/461 (14%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN ++VG + G E+AL ++RQM L PD T+ S L + G+EIH A
Sbjct: 93 SWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQA 152
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GL +V + + ++NMYAKC +E++ +F + K +SW I G G +
Sbjct: 153 MQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAF 212
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ F++M + P +++ S++ A + L GK +H I+ G + + + ++L+ MY
Sbjct: 213 EIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMY 272
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG+ + R +F+K+ D+++W +I G A G +A ++ QM+++GV PN + +V
Sbjct: 273 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYV 332
Query: 248 AVLTAC-----------------------------------SHAGLIDKAWSYFNSMTKD 272
+L AC S G I A F+ M +
Sbjct: 333 ILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRK 392
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEA---YEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
I+ + A+ L ++G EA Y+ + P + ++L+AC +E
Sbjct: 393 DVIS-----WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEW 447
Query: 330 AGKVAEKIF---MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIE 386
++ +++ + ++G ++ N Y+ KDA +VF R I+
Sbjct: 448 GRRIHQQVVEAGLATDAHVGNTLV--NMYSMCGSVKDAR--QVFDR-----------MIQ 492
Query: 387 VKNKAY-AFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
AY A + G +H EALK L +R+++EG PD
Sbjct: 493 RDIVAYNAMIGGYAAHNLG---KEALK-LFDRLQEEGLKPD 529
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 228/509 (44%), Gaps = 59/509 (11%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
A+++V+ + + +S +L + D++ G+++H + I+H + ++LIN
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 85 MYAKCARVEDSHRLFCLLPVKDAI--SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
MY +C +E++ +++ L + SWN+++ G +Q G ++ LK RQM + P
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
+ S + +C L G+++H ++ G ++ +A+ +L+MYAKCG+I AR +FDK
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS-------- 254
M+ +VSWT I G A G + A +F++ME++GV PN + +++VL A S
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 255 ---HAGLIDKA----WSYFNSMTKDYGIAPSFEHYAAV------ADL---------LGRA 292
H+ +++ + ++ K Y S++ V DL L
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 293 GKLQEAYEFISNMH---AGPTENVWLTLLSAC----RVHKNVELAGKVAEKIFMIDPNNM 345
G +EA E + M P + ++ LL+AC +H E+ +VA+ F D +
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD---I 363
Query: 346 GAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYH 405
G L + Y+ KDA VF + M + SW A + G F
Sbjct: 364 GVQNALISMYSRCGSIKDAR--LVFDK---MVRKDVISWT-------AMIGGLAKSGFG- 410
Query: 406 RINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE-RLAIVFGIICTPDGTT 464
EAL + + M+Q G P+ + L + +V + T
Sbjct: 411 --AEALT-VYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVG 467
Query: 465 IRIIKNLRVCGDCHTAIKFISKIVQREII 493
++ +CG A + +++QR+I+
Sbjct: 468 NTLVNMYSMCGSVKDARQVFDRMIQRDIV 496
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 328/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +VSW ++ A+NG EAL I M +++KPD L SVL F D+ +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++ GL+ + SL MYAKC +V + LF + + I WN++I+G +N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F +M+ ++P +S +S + ACA + +L + ++ + R+ + D++FI+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DM+AKCG++ AR +FD+ D+V W+A+I+G LHG A +AISL+ ME+ GV
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L AC+H+G++ + W +FN M D+ I P +HYA V DLLGRAG L +AYE
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P VW LLSAC+ H++VEL A+++F IDP+N G YV LSN YAAAR
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +RV M+ KG+ K CSW+EV+ + AF GDKSHP Y I ++ + R+++
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+V + LHD+ +E+ + L HSER+AI +G+I TP GT +RI KNLR C +CH A
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK+V REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + WN +I G +RN +++AL + M + PDSFT +L + + G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
+ +H R G DA+V + + LI +YAKC R+ + +F LP + +SW +I++
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E L+ F M +KP V+ S++ A L L G+ +H +++ G +
Sbjct: 199 QNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SL MYAKCG + A+ +FDKM +++ W A+I G A +G A +AI +F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DY 273
V+P++++ + ++AC+ G +++A S + + + DY
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 135/262 (51%), Gaps = 4/262 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + GL + + + LI+ + + + ++F LP WN+II G +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + L + M +A++ P +F ++ AC+ L+ L +G+ +H + R GFD ++F+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+ +YAKC + AR +F+ + L + IVSWTA++ A +G +A+ +F M K
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ VA V+VL A + + + S S+ K G+ + ++ + + G++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
M + P +W ++S
Sbjct: 277 KILFDKMKS-PNLILWNAMISG 297
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++S++ + H L KQ+H ++ G + F+ + L+ + G+I AR +FD +
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
I W A+I G + + + DA+ ++ M+ V P+S F +L ACS
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/516 (44%), Positives = 325/516 (62%), Gaps = 6/516 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN +I G NG YEEAL + ++M N++PD TL SV+ A + G+++H
Sbjct: 160 DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVH 219
Query: 65 GYAIR----HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ HG +++ I ++LI++Y+KC VE + LF L KD +SWN++I G
Sbjct: 220 SWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHT 279
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMF 178
L+ E L F++ML + P V+ S++PACAHL + +G+ +H I + G +
Sbjct: 280 NLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETS 339
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ M + SW A+I G A+HG A+ A LF +M +
Sbjct: 340 LRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNR 399
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+P+ + FV +L+ACSH+GL+D F SMT+DY + P EHY + DLLG +G +EA
Sbjct: 400 VEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEA 459
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I M P +W +LL AC+ H N+ELA A+K+ I+P N G+YV+LSN YA A
Sbjct: 460 EEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATA 519
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D A +R + KGMKK P CS IEV + + F+ GDK HP I L+E+ ++
Sbjct: 520 GRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQL 579
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+ PDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 580 EEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 639
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REI+ RD +RFHHF DG CSC DYW
Sbjct: 640 EATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 176/338 (52%), Gaps = 38/338 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT++ G A + AL + +M ++ P+S++ +L A +G++IH
Sbjct: 28 NLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIH 87
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVED--------SHR------------------- 97
++ G + + +SLI+MYA+ +ED SHR
Sbjct: 88 AQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFR 147
Query: 98 ----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F + +D +SWN++I G V+NG ++E L+ F++M+ ++P + S++ ACA
Sbjct: 148 SARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACA 207
Query: 154 HLTTLHLGKQLHGCI----IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
++ LG+Q+H + +GF ++ I ++L+D+Y+KCG++ A +F+ + D+V
Sbjct: 208 QSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVV 267
Query: 210 SWTAVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFN 267
SW +I G H N + +A+ LF++M + G PN V ++VL AC+H G ID W +
Sbjct: 268 SWNTLI-GGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVY 326
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
K G+ ++ D+ + G ++ A++ ++M
Sbjct: 327 IDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM 364
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 331/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +SW T+I GL +NGL++EA++ ++MG D FT SVL ++ + +G
Sbjct: 230 MPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEG 289
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH Y IR N+ +GS+L++MY KC V+ + +F + K+ ISW +++ G QN
Sbjct: 290 KQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQN 349
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E ++ F M +I P + S++ +CA+L +L G Q HG + +G + ++
Sbjct: 350 GYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVS 409
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG++ A +F +M + D VSWTA++ G A G A++ ISLFE M G+
Sbjct: 410 NALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIV 469
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V FV VL+ACS AGL++K + YF M K++ I P +HY + DLL RAG+L+EA
Sbjct: 470 PDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKN 529
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI+ M P W TLLS+CR++ N+E+ AE + ++P N +Y++LS+ YAA +
Sbjct: 530 FINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGK 589
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A LR MR G+KK P SWI+ KNK + F A D+S PF +I L+ L +M +
Sbjct: 590 WDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIE 649
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VLHDVE+ +K +L +HSE+LAI FG++ PDG IR++KNLRVCGDCH A
Sbjct: 650 EGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNA 709
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS+I QREI+VRD RFH F+DG CSCGD+W
Sbjct: 710 TKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 185/354 (52%), Gaps = 38/354 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP D+VSWN+++ G A NGL E++ + M G+VNL +F+ +L +VD+
Sbjct: 97 MPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDL 156
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------ 99
G++IHG + G + + +GS L++MYAK + D++R+F
Sbjct: 157 --GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGL 214
Query: 100 --CL-----------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
C +P KD+ISW +II G QNGLF E + F++M I +F
Sbjct: 215 LRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFG 274
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ AC L GKQ+H IIR + DN+F+ S+LLDMY KC N++ A +F KM
Sbjct: 275 SVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHK 334
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
+++SWTA+++G +G + +A+ +F M+++ + P+ +V+++C++ +++ + F
Sbjct: 335 NVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG-AQF 393
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ G+ A+ L G+ G L+ A++ M E W L+S
Sbjct: 394 HGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI-RDEVSWTALVSG 446
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 40/258 (15%)
Query: 28 IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYA 87
I+R + N P++F ++++ + D+ + + H N+ ++L++ Y+
Sbjct: 31 IIRTLTN----PETFLYNNLINTYGKLGDLKNARNV----FDHIPQPNLFSWNTLLSAYS 82
Query: 88 KCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFS 146
K ++D R+F +P D +SWNS+++G NGL E ++ + ML + ++FS
Sbjct: 83 KLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFS 142
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR------------ 194
+++ ++ + LG+Q+HG I + G+ +F+ S L+DMYAK G I
Sbjct: 143 TMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEK 202
Query: 195 -----------LARC--------IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
L RC +FD M D +SWT +I G +G +A+ F++M
Sbjct: 203 NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG 262
Query: 236 KDGVKPNSVAFVAVLTAC 253
+G + F +VLTAC
Sbjct: 263 IEGFCMDQFTFGSVLTAC 280
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC----------------------- 198
K+LH IIR + F+ ++L++ Y K G+++ AR
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 199 --------IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAV 249
+FD M HD+VSW +++ G A +G +++ ++ M KDG V N + F +
Sbjct: 85 GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L S+ G +D + K +G + + D+ + G + +A + P
Sbjct: 145 LILSSNRGFVDLGRQIHGQIFK-FGYQSYLFVGSPLVDMYAKTGFINDANRIFEEI---P 200
Query: 310 TENV-----WLTLLSACR 322
+N+ +T L CR
Sbjct: 201 EKNIVVYNTMITGLLRCR 218
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/514 (44%), Positives = 334/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D SWN VI G G Y EAL++ R M N + + FTLSS L A + +
Sbjct: 155 MPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRR 214
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHGY IR GL+ + + ++L+++Y KC + ++ +F + KD +SW ++I C +
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G EG FR ++ + ++P +F+ ++ ACA L +GK++HG + R G+D F
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+ +Y+KCGN AR +F++M D+VSWT++I+G A +G A+ FE + + G
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + FV VL+AC+HAGL+D YF+S+ + +G+ + +HYA V DLL R+G+ +EA
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAE 454
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I NM P + +W +LL CR+H N+ELA + A+ +F ++P N Y+ LSN YA A
Sbjct: 455 NIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAG 514
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W + +R M N+G+ K P SWIE+K + + F+ GD SHP I+E L EL ++M+
Sbjct: 515 LWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMK 574
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGYV DT VLHDVEEEQK+ ++YHSE+LA+ FGII T GT I++ KNLR C DCH
Sbjct: 575 EEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHN 634
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
A+K+ISKIVQR+IIVRD++RFH F DG CSC DY
Sbjct: 635 AMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKC------------------------------ 89
GK +H + + I + LI+MYAKC
Sbjct: 82 GKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYAN 141
Query: 90 -ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHV-SFSS 147
R+E + +LF +P +D SWN++I+G V G + E L FR M + ++ + SS
Sbjct: 142 VGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
+ A A +++L GK++HG +IR+G + + + ++LLD+Y KCG++ AR IFD+M D
Sbjct: 202 ALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKD 261
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
IVSWT +I G + SLF + GV+PN F VL AC+
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLL 318
MT+ G P +A+ + + G + A + M P W +L+
Sbjct: 322 YMTR-VGYDPFSFAASALVHVYSKCGNTETARRVFNQM-PRPDLVSWTSLI 370
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
C QN L E + + + I + PR +S+++ AC L LGK++H + F
Sbjct: 43 CQQNRL-KEAVDYLHR--IPQPSPR--LYSTLIAACLRHRKLELGKRVHAHTKASNFIPG 97
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ I++ L+ MYAKCG++ A+ +FD++ D+ SW +I G A G A LF++M
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ ++ AV++ G +A F M ++
Sbjct: 158 R----DNFSWNAVISGYVSQGWYMEALDLFRMMQEN 189
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/545 (42%), Positives = 328/545 (60%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++++WN ++ GL R+G +A+ + +M + PD+ +S L D +V GK++H
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVH 176
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------------- 99
GY ++ G + C+ ++LI+MY KC R ++ R+F
Sbjct: 177 GYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVS 236
Query: 100 ----------CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
C + +SW SI+A CVQNG E + FR M ++P V+ ++
Sbjct: 237 EALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVL 296
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
PA A++ L G+ H +R GF ++++ S+L+DMYAKCG R AR IFD M ++V
Sbjct: 297 PAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVV 356
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW A+I G A+HG+A +A+ LF M+K KP+ V F VL ACS AGL ++ YFN M
Sbjct: 357 SWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEM 416
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ +GI+P EHYA + LLGR+GKL EAY+ I+ M P +W +LL +CRV+ NV L
Sbjct: 417 QQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLL 476
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AEK+F ++P N G YV+LSN YA+ + W +R M+N G+KK CSWIE+KN
Sbjct: 477 AEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKN 536
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + +AGD SHP I E L +L M + G+ P VLHDVEE++K N+L HSE+
Sbjct: 537 KVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEK 596
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ G+I T GT +R+IKNLR+CGDCH A+KFIS QREI VRD +RFHHF+DGKCS
Sbjct: 597 LAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCS 656
Query: 510 CGDYW 514
CGDYW
Sbjct: 657 CGDYW 661
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 120/280 (42%), Gaps = 39/280 (13%)
Query: 34 NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE 93
+V+ PD L S L + +H A+ GL + + SSL++ Y +
Sbjct: 13 HVSFPPDPHLLPSALKSCPAQP---LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATG 69
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI----- 148
+ +F +P K+ + W+++IAG G + QM A ++P ++++ +
Sbjct: 70 AARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLN 129
Query: 149 -----MPACAHLTTLH-------------------------LGKQLHGCIIRNGFDDNMF 178
+ A L +H +GKQ+HG +++ G +
Sbjct: 130 RSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDAC 189
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+DMY KCG +F + D+ S A++ G + + +A+ LF + G
Sbjct: 190 VVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRG 249
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
V+ N V++ +++ C G +A F +M + G+ P+
Sbjct: 250 VELNVVSWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPN 288
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 141 RHVSFSS---IMP-ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
RHVSF ++P A L + LH + +G ++ F+ASSLL Y + G A
Sbjct: 12 RHVSFPPDPHLLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAA 71
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
R +FD+M ++V W+A+I G + G+A A L EQM GV+PN + + +++ + +
Sbjct: 72 RSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRS 131
Query: 257 G 257
G
Sbjct: 132 G 132
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSWN +I G A +G A+ + M KPD T + VL + +G
Sbjct: 350 MPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEG 409
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ + HG+ + + ++ + + ++++++ L +P + D+ W S++ C
Sbjct: 410 RRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSC 468
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/524 (44%), Positives = 342/524 (65%), Gaps = 10/524 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM------GN---VNLKPDSFTLSSVLPIF 51
+P ++V+W ++I G +N EAL + ++ GN V DS + SVL
Sbjct: 143 IPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSAC 202
Query: 52 ADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN 111
+ + + +HG AI+ GLD + + ++L++ YAKC V S ++F + KD +SWN
Sbjct: 203 SRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWN 262
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
S+IA QNGL + + F ML A K V+ S+++ ACAH L +G LH +I+
Sbjct: 263 SMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIK 322
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G+ +N+ +A+S++DMY KCG +AR FD M ++ SWTA+I G +HG A +A+ +
Sbjct: 323 MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDV 382
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F QM GVKPN + F++VL ACSHAG +++ W +FN+M+ +Y + P EHY + DLLG
Sbjct: 383 FYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLG 442
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
RAG ++EAY I +M +W +LL+ACR+HK+VELA A ++F +DP+N G YV+
Sbjct: 443 RAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVL 502
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
L+N YA A RWKD +R+ ++++G+ K P S +E+K + + F+ GDK HP + +I +
Sbjct: 503 LANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKY 562
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L+EL ++++ GYVP+ VLHDV+EE+K+ ++ HSE+LA+ FG++ + G+TI +IKN
Sbjct: 563 LEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKN 622
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LRVCGDCHT IK ISKIV REIIVRD RFHHF+DG CSCGDYW
Sbjct: 623 LRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+ SWN++I LAR G E+L M +++KP+ T + + D+ GK+
Sbjct: 45 TDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQA 104
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A+ G ++++ + S+LI+MY+KC ++ ++ LF +P ++ ++W S+I G VQN
Sbjct: 105 HQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDA 164
Query: 124 DEGLKFFRQMLIAKIKPR---------HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
E L F++ L K + V+ S++ AC+ ++ + + +HG I+ G D
Sbjct: 165 HEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLD 224
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
M + ++LLD YAKCG + L+R +FD M D+VSW ++I A +G + DA +F M
Sbjct: 225 KVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGM 284
Query: 235 EK-DGVKPNSVAFVAVLTACSHAGLI 259
K G K N V +L AC+H G +
Sbjct: 285 LKAGGGKYNEVTLSTLLLACAHEGAL 310
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
A N L D D+ SW ++I A G++ +++ F M K +KPN F
Sbjct: 27 AAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFP 86
Query: 248 AVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ +CS L D + + +G +A+ D+ + GKL A +
Sbjct: 87 CAIKSCS--ALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEI- 143
Query: 307 AGPTENV--WLTLLSA 320
P N+ W +L++
Sbjct: 144 --PRRNIVTWTSLITG 157
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 218/515 (42%), Positives = 333/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VS+ ++I G AR GL EA+ + +M + PD +T+++VL A + +G
Sbjct: 357 MSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEG 416
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + + ++ + ++L++MYAKC + ++ +F + VKD ISWN++I G +N
Sbjct: 417 KRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKN 476
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E L F +L+ K P + + ++PACA L+ G+++HG I+RNG+ + +
Sbjct: 477 CYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+DMYAKCG + LAR +FD + D+VSWT +I G +HG +AI+LF QM + G+
Sbjct: 537 ANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ ++FV++L ACSH+GL+D+ W +FN M + I P+ EHYA + D+L R G L +AY
Sbjct: 597 EPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAY 656
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI NM P +W LL CR+H +V+LA +VAEK+F ++P N G YV+++N YA A
Sbjct: 657 RFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAE 716
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ LR + +G++K P CSWIE+K + FVAGD S+P +I L+ + RM
Sbjct: 717 KWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMI 776
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L D EE +K+ L HSE+LA+ GII + G IR+ KNLRVCGDCH
Sbjct: 777 EEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHE 836
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ +REI++RD++RFH F+DG CSC +W
Sbjct: 837 MAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 166/303 (54%), Gaps = 11/303 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ LA++G + ++ + ++M + ++ DS+T S V F+ V G+++HGY +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYIL 222
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +G+SL+ Y K RV+ + ++F + +D ISWNSII G V NGL ++GL
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QML + I+ + S+ CA + LG+ +H ++ F ++LLDMY+
Sbjct: 283 VFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYS 342
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG++ A+ +F +M +VS+T++I G A G A +A+ LFE+ME++G+ P+ A
Sbjct: 343 KCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 249 VLTACSHAGLIDKA-----WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
VL C+ L+D+ W N M D ++ A+ D+ + G ++EA S
Sbjct: 403 VLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN------ALMDMYAKCGSMREAELVFS 456
Query: 304 NMH 306
M
Sbjct: 457 EMR 459
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 144/264 (54%), Gaps = 3/264 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWN++I G NGL E+ L++ QM ++ D T+ SV AD + G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + ++ ++L++MY+KC ++ + +F + + +S+ S+IAG +
Sbjct: 316 RAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYARE 375
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E +K F +M I P + ++++ CA L GK++H I N ++F++
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVS 435
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDG 238
++L+DMYAKCG++R A +F +M + DI+SW VI G + + A++A+SLF + EK
Sbjct: 436 NALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR- 494
Query: 239 VKPNSVAFVAVLTACSHAGLIDKA 262
P+ VL AC+ DK
Sbjct: 495 FSPDERTVACVLPACASLSAFDKG 518
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 135/250 (54%), Gaps = 2/250 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT + +G + A+ ++ G ++ P TL SVL + AD + GKE+ +
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G + +GS L MY C ++++ R+F + ++ A+ WN ++ ++G F +
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M+ + ++ +FS + + + L +++ G+QLHG I+++GF + + +SL+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
+ AR +FD+M D++SW ++I G +G A +S+F QM G++ + V+V
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302
Query: 250 LTACSHAGLI 259
C+ + LI
Sbjct: 303 FAGCADSRLI 312
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/512 (45%), Positives = 327/512 (63%), Gaps = 2/512 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + ++M N+KPD T+ +VL A + G
Sbjct: 195 IPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELG 254
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y KC VE + LF L KD ISWN++I G
Sbjct: 255 RQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHM 314
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + G +
Sbjct: 315 NLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSS 374
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A+ +FD M + SW A+I G A+HG A+ A +F +M KDG
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDG 434
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SMT+DY I P EHY + DLLG +G +EA
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEA 494
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I++M P +W +LL AC++H NVEL A+ + I+P N G+YV+LSN YA A
Sbjct: 495 EEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATA 554
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 555 GRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLL 614
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 615 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 674
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
A K ISKI +REII RD +RFHHF DG CSC
Sbjct: 675 EATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 174/334 (52%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+S+T +L A +G++IH
Sbjct: 67 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIH 126
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVED--------SHR------------------- 97
G+ ++ G D ++ + +SLI MY K R ED SHR
Sbjct: 127 GHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIX 186
Query: 98 ----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F +PVKD +SWN++I+G + G + E L+ F++M+ +KP + +++ ACA
Sbjct: 187 SAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACA 246
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D+Y KCG + A +F+ + D++SW
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNT 306
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTK 271
+I G H N + +A+ LF++M + G PN V +++L AC+H G ID W + +
Sbjct: 307 LI-GGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G++ ++ D+ + G ++ A + +M
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD---MYAKCGNIRLARCIFDKM 203
S++ C L +L + +H +I+ G + + S L++ + + A +FD +
Sbjct: 7 SLLHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSI 63
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+++ W + G+AL + A+ L+ M G+ PNS F +L AC+ +
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKS 116
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/549 (42%), Positives = 349/549 (63%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIK 59
MP D+VSWN++I G ++ G EAL I +M N +LKPD+FTL+S+L A+ +
Sbjct: 234 MPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNI 293
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE-------------------------- 93
GK+IH Y +R + + +G++LI+MYAK VE
Sbjct: 294 GKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353
Query: 94 -------DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
+ +F L +D ++W ++I G VQNGL+++ L+ FR M+ +P + +
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD-L 205
+++ + LT L GKQ+H I+ G + ++L+ MYAK GNI +A+ +FD +
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGK 473
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+IVSWT++IM A HG +AI+LFE+M G+KP+ + +V VL+AC+H GL+++ Y
Sbjct: 474 KEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKY 533
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+N MT+ + I P+ HYA + DL GRAG LQEAY FI +M P W +LL++C++HK
Sbjct: 534 YNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHK 593
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N +LA AE++ +IDP N GAY+ L+N Y+A +W++AA R M+++G++K SWI
Sbjct: 594 NADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWI 653
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+KN+ +AF D HP I + + E+ E +++ G++PDT+ VLHD+EEE K+ +L Y
Sbjct: 654 HIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKY 713
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG++ TP+ T +RI+KNLRVC DCH+AIKFISK+V REIIVRD +RFHHF+D
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 774 GSCSCRDYW 782
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 65/325 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +IVG + GL++ A+ + +M + + P FT+S+VL A + G
Sbjct: 102 MPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIG 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKC------------------------------- 89
++IH + ++ GL + V + +SL+NMYAKC
Sbjct: 162 RKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQS 221
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
+ E + F +P +D +SWNS+I+G Q G E L F +ML +KP + + +SI
Sbjct: 222 GQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASI 281
Query: 149 MPACAHLTTLHLGKQLHGCIIR-----NGFDDNMFIA----------------------- 180
+ ACA+L L++GKQ+H I+R +G N I+
Sbjct: 282 LSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL 341
Query: 181 -----SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+SLLD Y K GN++ AR IF+K+ D+V+WTA+I+G +G +DA+ LF M
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401
Query: 236 KDGVKPNSVAFVAVLTACSHAGLID 260
+G +PNS A+L+ S +++
Sbjct: 402 NEGPEPNSYTLAAMLSVSSSLTILE 426
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 6/199 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++LI+ YAK E S RL +P D +SW +II G Q GLFD + F +M+ ++
Sbjct: 80 NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P + S+++ +CA TL +G+++H +++ G + +A+SLL+MYAKCG+ +A+ +
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGL 258
FD+M + +I +W A+I G A S FE+M ++D V NS +++ S G
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS-----MISGYSQQGY 254
Query: 259 IDKAWSYFNSMTKDYGIAP 277
+A + F+ M + + P
Sbjct: 255 NLEALAIFSKMLNEPSLKP 273
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F+ I+ + G+ +H II+ G +++ ++L+ YAK G++R A +FD+M
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
L SW +I G A GN + L +M + V++ A++ + GL D A
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMP----DCDPVSWTAIIVGYNQFGLFDNAIW 128
Query: 265 YFNSMTKDYGIAPS 278
F M + + PS
Sbjct: 129 MFAKMISER-VPPS 141
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/509 (45%), Positives = 327/509 (64%), Gaps = 1/509 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSW ++I G A+NG EAL I +M N++PD L SVL + D D+ GK IHG
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
I+ GL+ + SL ++YAKC V + F + I WN++I+G V+NG +E
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ FR M I+P ++ +S + ACA + +L L + + I + F +++ + +SL+D
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLID 418
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
YAKCG++ +AR +FD++ D+V W+A+++G LHG ++I LF M + GV PN V
Sbjct: 419 TYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVT 478
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
FV +LTAC ++GL+++ W F+ M +DYGI P +HYA V DLLGRAG L AY F+ NM
Sbjct: 479 FVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNM 537
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +VW LLSAC++H++V L AE++F +DP N G YV LSN YA++ W A
Sbjct: 538 PIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVA 597
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+RV MR KG+ K S IE+ K AF AGDK+HP I E +++L R+++ G+VP
Sbjct: 598 KVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVP 657
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
T+ VLHD+ E+ + L HSERLAI +G+I TP GTT+RI KNLR C +CH AIK IS
Sbjct: 658 HTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLIS 717
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+V REI+VRD RFHHF+DG CSCGDYW
Sbjct: 718 KLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 144/262 (54%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P D+ WN ++ +R+G + A+ + +M + PD F+ VL + + G
Sbjct: 133 FPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMG 192
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG RHG +++V + + L+ +YAKC + ++ +F L + +SW SII+G QN
Sbjct: 193 RRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQN 252
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F +M ++P ++ S++ A + L GK +HGC+I+ G + +
Sbjct: 253 GQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLL 312
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SL +YAKCG++ +AR F++++ ++ W A+I G +G A +AI LF M+ ++
Sbjct: 313 ISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIR 372
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P+S+ + + AC+ G ++ A
Sbjct: 373 PDSITVTSSIAACAQIGSLELA 394
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 13/306 (4%)
Query: 22 YEEALNIVRQMGN-------VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDA 74
Y +LN+ N KPD F S + D + +I+ + GL
Sbjct: 50 YSSSLNLTTHFNNNKDDCNESTFKPDKFYAS----LIDDSIHKTHLNQIYAKLLVTGLQY 105
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+ + L+N + V + +LF P D WN+I+ ++G F ++ + +M
Sbjct: 106 GGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQ 165
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+A + P SF ++ AC+ L L +G+++HG I R+GF+ ++F+ + L+ +YAKCG I
Sbjct: 166 VACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIV 225
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F ++ IVSWT++I G A +G +A+ +F +M K V+P+ +A V+VL A +
Sbjct: 226 RANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYT 285
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVW 314
++ S + K G+ F+ ++ L + G + A F N P+ W
Sbjct: 286 DVEDLEHGKSIHGCVIK-MGLECEFDLLISLTSLYAKCGHVMVARLFF-NQVENPSLIFW 343
Query: 315 LTLLSA 320
++S
Sbjct: 344 NAMISG 349
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/541 (43%), Positives = 336/541 (62%), Gaps = 31/541 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWNT+I G A++G +EA RQ+ + + D FT ++++ + V +
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 61 KEIH----------------GYAIRHGLDA-----------NVCIGSSLINMYAKCARVE 93
+E+ GY ++ NV +++I YA+C ++
Sbjct: 301 RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKIS 360
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ LF +P +D +SW ++IAG Q+G E L+ F QM + SFSS + CA
Sbjct: 361 EAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L LGKQLHG +++ G++ F+ ++LL MY KCG+I A +F +M DIVSW
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 480
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G + HG A+ FE M+++G+KP+ VAVL+ACSH GL+DK YF +MT+DY
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDY 540
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G+ P+ +HYA + DLLGRAG L++A+ + NM P +W TLL A RVH N ELA
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETA 600
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+KIF ++P N G YV+LSN YA++ RW D LRV MR+KG+KK P SWIE++NK +
Sbjct: 601 ADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHT 660
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD+ HP I L+EL RM++ GYV T VLHDVEEE+K+ ++ YHSERLA+
Sbjct: 661 FSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVA 720
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+GI+ G IR+IKNLRVC DCH AIK++++I R II+RDN+RFHHF+DG CSCGDY
Sbjct: 721 YGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDY 780
Query: 514 W 514
W
Sbjct: 781 W 781
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 22/270 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP VS+N +I G RNG +E A + +M +L + + ++ + ++ K
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNLGKA 145
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ + I D VC +++++ YA+ V+D+ +F +P K+ +SWN++++ VQN
Sbjct: 146 REL--FEIMPERD--VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 201
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
+E F+ ++ VS++ ++ + +Q + +R+ N I
Sbjct: 202 SKMEEACMLFK----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
YA+ G I AR +FD+ + D+ +WTA++ G + +A LF++M
Sbjct: 258 TG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP---- 308
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+ N V++ A+L ++ A F+ M
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 125/267 (46%), Gaps = 22/267 (8%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D+++ + I+ Y + R ++ R+F +P ++S+N +I+G ++NG F+ K F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + VS++ ++ L ++L + + ++ +++L YA+ G
Sbjct: 121 MPERDL----VSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGC 172
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR +FD+M + VSW A++ + +A LF+ E + V++ +L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGG 228
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
I +A +F+SM ++ + + ++GK+ EA + P ++
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVS-----WNTIITGYAQSGKIDEARQLFDE---SPVQD 280
Query: 313 V--WLTLLSACRVHKNVELAGKVAEKI 337
V W ++S ++ VE A ++ +K+
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKM 307
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 334/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++ W+ +I A++ EEA+ + +M + P+ FTL+S+L A VD+ G
Sbjct: 307 MPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLG 366
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH + ++ GLD NV + ++L++MYAKC R+E+S +LF P +SWN++I G VQ
Sbjct: 367 NQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQA 426
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L F+ ML +++ V++SS++ ACA + L G Q+H ++ +D N +
Sbjct: 427 GNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVG 486
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCGNI+ AR +FD + HD VSW A+I G ++HG +A+ FE M + K
Sbjct: 487 NALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECK 546
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V FV +L+ACS+AGL+D+ +YF SM ++Y I P EHY + LLGR+G L +A +
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAK 606
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ + P+ VW LLSAC +H +VEL A+++ I+P + +V+LSN YA ARR
Sbjct: 607 LVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARR 666
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + AS+R M+ KG++K P SWIE + + + F GD SHP IN L+ L +
Sbjct: 667 WGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARN 726
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VL DVE+ K+ L+ HSERLA+ +G+I TP + +RIIKNLR+C DCH A
Sbjct: 727 EGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAA 786
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIVQR+II+RD +RFHHF +G CSCGDYW
Sbjct: 787 IKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 176/350 (50%), Gaps = 4/350 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++ N +EE+L + +M V KP++FT +SVL GK +H
Sbjct: 210 DMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVH 269
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A + + +G LI++Y K V+D+ ++F +P D I W+ +IA Q+ +
Sbjct: 270 GCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSE 329
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M + P + +S++ ACA L L LG Q+H +++ G D N+F++++L+
Sbjct: 330 EAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALM 389
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + + +F + VSW VI+G GN A+ LF+ M + V+ V
Sbjct: 390 DMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEV 449
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+ +VL AC+ ++ S +S++ + A+ D+ + G +++A + +
Sbjct: 450 TYSSVLRACAGIAALEPG-SQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFD 507
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID--PNNMGAYVILS 352
M + W ++S VH A K E + + P+ + ILS
Sbjct: 508 MLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILS 557
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+ T+I G ++ + EA+ + ++ + + F S+VL + G
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + G D++ +G++LI+ Y+ C E + ++F + KD +SW ++A V+N
Sbjct: 165 FSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVEN 224
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F+E LK F +M I KP + +F+S++ AC L ++GK +HGC + + + +F+
Sbjct: 225 ECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVG 284
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+D+Y K G++ A +F++M D++ W+ +I A + +AI +F +M + V
Sbjct: 285 VELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVL 344
Query: 241 PNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN ++L AC A L+D + + + G+ + A+ D+ + G+++ +
Sbjct: 345 PNQFTLASLLQAC--ASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402
Query: 300 EFISNMHAGPTENVWLTLL 318
+ S T+ W T++
Sbjct: 403 QLFSE-SPNCTDVSWNTVI 420
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 161/370 (43%), Gaps = 58/370 (15%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D GK +H I+ G ++ + L+N Y K + D+ +LF +P ++ +S+ ++I
Sbjct: 59 DCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQ 118
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G Q F E + F ++ + FS+++ LG +H C+ + GFD
Sbjct: 119 GYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDS 178
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ F+ ++L+D Y+ CG AR +FD ++ D+VSWT ++ + +++ LF +M
Sbjct: 179 DAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMR 238
Query: 236 KDGVKPNSVAFVAVLTACS-----------------------------------HAGLID 260
G KPN+ F +VL AC +G +D
Sbjct: 239 IVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVD 298
Query: 261 KAWSYFNSMTKDYGIAPSF--EHYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWL 315
A F M KD I SF YA ++ + +EA E M G P +
Sbjct: 299 DALQVFEEMPKDDVIPWSFMIARYA-------QSEQSEEAIEMFCRMRRGLVLPNQFTLA 351
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYV--ILSNTYAAARRWKDAASLRVFMRN 373
+LL AC +++L ++ + + +M +V L + YA R ++ SL++F
Sbjct: 352 SLLQACASLVDLQLGNQIHCHVVKVGL-DMNVFVSNALMDMYAKCGRMEN--SLQLF--- 405
Query: 374 KGMKKTPACS 383
++P C+
Sbjct: 406 ---SESPNCT 412
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ S++ +C GK LH II+ G ++F + LL+ Y K ++ A +FD+M
Sbjct: 47 YGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMP 106
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+ VS+ +I G + +AI LF +++ +G + N F VL
Sbjct: 107 DRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/549 (42%), Positives = 349/549 (63%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIK 59
MP D+VSWN++I G ++ G EAL I +M N +LKPD+FTL+S+L A+ +
Sbjct: 234 MPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNI 293
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE-------------------------- 93
GK+IH Y +R + + +G++LI+MYAK VE
Sbjct: 294 GKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353
Query: 94 -------DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
+ +F L +D ++W ++I G VQNGL+++ L+ FR M+ +P + +
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD-L 205
+++ + LT L GKQ+H I+ G + ++L+ MYAK GNI +A+ +FD +
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGK 473
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+IVSWT++IM A HG +AI+LFE+M G+KP+ + +V VL+AC+H GL+++ Y
Sbjct: 474 KEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKY 533
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+N MT+ + I P+ HYA + DL GRAG LQEAY FI +M P W +LL++C++HK
Sbjct: 534 YNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHK 593
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N +LA AE++ +IDP N GAY+ L+N Y+A +W++AA R M+++G++K SWI
Sbjct: 594 NADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWI 653
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+KN+ +AF D HP I + + E+ E +++ G++PDT+ VLHD+EEE K+ +L Y
Sbjct: 654 HIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKY 713
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG++ TP+ T +RI+KNLRVC DCH+AIKFISK+V REIIVRD +RFHHF+D
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 774 GSCSCRDYW 782
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 65/325 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +IVG + GL++ A+ + +M + + P FT+S+VL A + G
Sbjct: 102 MPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIG 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKC------------------------------- 89
++IH + ++ GL + V + +SL+NMYAKC
Sbjct: 162 RKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQS 221
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
+ E + F +P +D +SWNS+I+G Q G E L F +ML +KP + + +SI
Sbjct: 222 GQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASI 281
Query: 149 MPACAHLTTLHLGKQLHGCIIR-----NGFDDNMFIA----------------------- 180
+ ACA+L L++GKQ+H I+R +G N I+
Sbjct: 282 LSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL 341
Query: 181 -----SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+SLLD Y K GN++ AR IF+K+ D+V+WTA+I+G +G +DA+ LF M
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401
Query: 236 KDGVKPNSVAFVAVLTACSHAGLID 260
+G +PNS A+L+ S +++
Sbjct: 402 NEGPEPNSYTLAAMLSVSSSLTILE 426
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 112/199 (56%), Gaps = 6/199 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++LI+ YAK E S RL +P D +SW +II G Q GLFD + F +M+ ++
Sbjct: 80 NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P + S+++ +CA TL +G+++H +++ G + +A+SLL+MYAKCG+ +A+ +
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGL 258
FD+M + +I +W A+I G A S FE+M ++D V NS +++ S G
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS-----MISGYSQQGY 254
Query: 259 IDKAWSYFNSMTKDYGIAP 277
+A F+ M + + P
Sbjct: 255 NLEALVIFSKMLNEPSLKP 273
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F+ I+ + G+ +H II+ G +++ ++L+ YAK G++R A +FD+M
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
L SW +I G A GN + L +M + V++ A++ + GL D A
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMP----DCDPVSWTAIIVGYNQFGLFDNAIW 128
Query: 265 YFNSMTKDYGIAPS 278
F M + + PS
Sbjct: 129 MFAKMISER-VPPS 141
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/515 (44%), Positives = 325/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL SWNT+I G A+N A + MG L D TL +L AD V +G
Sbjct: 222 MAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEG 281
Query: 61 KEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K IHGYA+R+ + + N +SLI MY C + D+ RLF + KD +SWNS+I G +
Sbjct: 282 KVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYAR 341
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L+ FR+M + P V+F +++ AC + L G +H +++ GFD N +
Sbjct: 342 NGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIV 401
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY+KCG++ +R +FD+M +VSW+A++ G LHG +AIS+ + M+ + V
Sbjct: 402 GTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSV 461
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P++ F ++L+ACSHAGL+ + F M K+Y + P+ HY+ + DLLGRAG L EAY
Sbjct: 462 IPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAY 521
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M PT ++W LL+A R+HKN++LA A+K+F ++P + +Y+ LSN YAA +
Sbjct: 522 VIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEK 581
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D +R +R KG+KK+P CS+IE+ N + F+ GDKSH I L EL ++++
Sbjct: 582 RWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLK 641
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY PDT V +DVEEE K+ +L+ HSERLAI F +I T GT IRI KNLRVCGDCHT
Sbjct: 642 EAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHT 701
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K IS++ REII+RD RFHHF G CSCGDYW
Sbjct: 702 VTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 116/215 (53%), Gaps = 1/215 (0%)
Query: 41 SFTLSSVLPIFADYVDVIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLF 99
S ++L F + +G+++H + I L+ N + + L YA C + + +F
Sbjct: 59 SLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIF 118
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ +K++ WN +I G NGL + L +R+ML + + ++ ++ AC L +
Sbjct: 119 DGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVE 178
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+G+++H ++ G + ++++ +SLL MYAK G++ AR +FD+M D+ SW +I G A
Sbjct: 179 IGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYA 238
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ ++ A +F+ M K G+ + + +L+AC+
Sbjct: 239 KNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA 273
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+++ + + + G+QLH +I ++N ++ + L YA CG + A IFD + L
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+ W +I G A +G ++ L+ +M G + ++ + VL AC L++
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVE 178
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/545 (42%), Positives = 331/545 (60%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVSWN ++ G NG Y+EA+ + R M PD T+S VLP DV+ G ++H
Sbjct: 204 NLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVH 263
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------------- 99
GY I+ GL ++ + S++++MY KC V++ R+F
Sbjct: 264 GYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVD 323
Query: 100 ----CLLPVKD------AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
KD ++W SIIA C QNG E L+ FR M ++P V+ S++
Sbjct: 324 TALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLI 383
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
PAC +++ L GK++H +R G D++++ S+L+DMYAKCG I+LAR FDKM ++V
Sbjct: 384 PACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLV 443
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW AV+ G A+HG A + + +F M + G KP+ V F VL+AC+ GL ++ W +NSM
Sbjct: 444 SWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSM 503
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
++++GI P EHYA + LL R GKL+EAY I M P VW LLS+CRVH N+ L
Sbjct: 504 SEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSL 563
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
AEK+F ++P N G Y++LSN YA+ W + +R M++KG++K P SWIEV +
Sbjct: 564 GEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGH 623
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + +AGD+SHP I E L +L +M++ GY+P T VL DVEE+ K+ +L HSE+
Sbjct: 624 KVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEK 683
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+V G++ T G +++IKNLR+C DCH IK IS++ REI VRD +RFHHF+DG CS
Sbjct: 684 LAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCS 743
Query: 510 CGDYW 514
CGD+W
Sbjct: 744 CGDFW 748
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 36/313 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P L S++++I AR+ + L + + L PD+F L S + A + G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI------------ 108
+++H +A G + + SSL +MY KC R+ D+ +LF +P +D +
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 109 -----------------------SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
SWN ++AG NG +DE + FR ML+ P +
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S ++PA L + +G Q+HG +I+ G + F+ S++LDMY KCG ++ +FD+++
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+I S A + G + +G A+ +F + + ++ N V + +++ +CS G +A
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363
Query: 266 FNSMTKDYGIAPS 278
F M + YG+ P+
Sbjct: 364 FRDM-QAYGVEPN 375
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL---LPVKDAISWNSIIA 115
+ ++ H +R L ++ + +SL++ YA + L LP S++S+I
Sbjct: 18 QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIH 77
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
++ F L F + ++ P S + +CA L L G+QLH +GF
Sbjct: 78 AFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLT 137
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ +ASSL MY KC I AR +FD+M D+V W+A+I G + G +A LF +M
Sbjct: 138 DSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMR 197
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
GV+PN V++ +L + G D+A F M
Sbjct: 198 SGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM 231
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +LVSWN V+ G A +G +E + + M KPD T + VL A +G
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC- 117
+ + + HG++ + + L+ + ++ ++E+++ + +P + DA W ++++ C
Sbjct: 497 WRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 556
Query: 118 VQNGL 122
V N L
Sbjct: 557 VHNNL 561
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/514 (43%), Positives = 333/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W T+I G +++ +AL + QM P+ FTLSSV+ A G
Sbjct: 112 MPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCG 171
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ ++ G D+NV +GS+L+++Y + ++D+ +F L ++ +SWN++IAG +
Sbjct: 172 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 231
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L+ F+ ML +P H S++S+ AC+ L GK +H +I++G F
Sbjct: 232 CGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 291
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G+I AR IFD++ D+VSW +++ A HG ++A+ FE+M + G++
Sbjct: 292 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIR 351
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++F++VLTACSH+GL+D+ W Y+ M KD GI HY + DLLGRAG L A
Sbjct: 352 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALR 410
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT +W LL+ACR+HKN EL AE +F +DP++ G +VIL N YA+ R
Sbjct: 411 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 470
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW+E++N + FVA D+ HP I +E+L ++++
Sbjct: 471 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 530
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT V+ V++++++ L YHSE++A+ F ++ TP G+TI I KN+RVCGDCH+A
Sbjct: 531 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSA 590
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK SK V REIIVRD +RFHHF+DG CSC DYW
Sbjct: 591 IKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 144/268 (53%), Gaps = 2/268 (0%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ +G+ +HG+ I+ ++ + ++L+NMYAKC +E++ ++F +P +D ++W ++I+G
Sbjct: 67 LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+ + L F QML P + SS++ A A G QLHG ++ GFD N
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 186
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+LLD+Y + G + A+ +FD ++ + VSW A+I G+A A+ LF+ M +
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G +P+ ++ ++ ACS G +++ M K +F + D+ ++G +
Sbjct: 247 EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIH 305
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVH 324
+A + + A W +LL+A H
Sbjct: 306 DARKIFDRL-AKRDVVSWNSLLTAYAQH 332
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 124 DEGLKFFRQMLIAKIKPRHVSF-SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
DE LKF L P F ++++ C L G+ +HG +I++ F ++ + ++
Sbjct: 32 DESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNT 91
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL+MYAKCG++ AR +FDKM D V+WT +I G + H DA+ LF QM + G PN
Sbjct: 92 LLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPN 151
Query: 243 SVAFVAVLTACS 254
+V+ A +
Sbjct: 152 EFTLSSVIKAAA 163
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 334/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSW ++I R GLY++A+ + +M + + PD ++++SVL A + KG
Sbjct: 715 MGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG 774
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y ++ + + + ++L++MYAKC +E+++ +F +PVKD +SWN++I G +N
Sbjct: 775 RDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKN 834
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E LK F +M + +P ++ + ++PAC L L +G+ +HGCI+RNG+ + +A
Sbjct: 835 SLPNEALKLFAEMQ-KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVA 893
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG++ AR +FD + D+++WT +I G +HG ++AI+ F++M G+K
Sbjct: 894 NALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIK 953
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F ++L ACSH+GL+++ W +FNSM + + P EHYA + DLL R G L +AY
Sbjct: 954 PDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYN 1013
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P +W LL CR+H +VELA KVAE +F ++P+N G YV+L+N YA A +
Sbjct: 1014 LIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEK 1073
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ LR + +G+KK+P CSWIEV+ K FV+ D +HP I L L +M+
Sbjct: 1074 WEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKN 1133
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EG+ P + L + + +K+ L HSE+LA+ FGI+ P G TIR+ KNLRVC DCH
Sbjct: 1134 EGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEM 1193
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK +REII+RD++RFHHF+DG CSC D+W
Sbjct: 1194 AKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 171/314 (54%), Gaps = 6/314 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ A+ G Y E++ + ++M + + +S+T S +L FA V + K IHG
Sbjct: 521 WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVY 580
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + + +SLI Y K V+ +H+LF L +D +SWNS+I+GCV NG L+
Sbjct: 581 KLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALE 640
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FF QMLI ++ + + + ACA++ +L LG+ LHG ++ F + ++LLDMY+
Sbjct: 641 FFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYS 700
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ A F+KM +VSWT++I G DAI LF +ME GV P+ + +
Sbjct: 701 KCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTS 760
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL AC+ +DK N + K+ +A A+ D+ + G ++EAY S +
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYLVFSQI--- 816
Query: 309 PTENV--WLTLLSA 320
P +++ W T++
Sbjct: 817 PVKDIVSWNTMIGG 830
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 176/349 (50%), Gaps = 5/349 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G NG AL QM + + D TL + + A+ + G+ +H
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALH 677
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ V ++L++MY+KC + D+ + F + K +SW S+IA V+ GL+D
Sbjct: 678 GQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYD 737
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ ++ F +M + P S +S++ ACA +L G+ +H I +N + ++++L+
Sbjct: 738 DAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALM 797
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG++ A +F ++ + DIVSW +I G + + ++A+ LF +M+K+ +P+ +
Sbjct: 798 DMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGI 856
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+L AC ++ + ++ G + A+ D+ + G L A + +
Sbjct: 857 TMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMYVKCGSLVHA-RLLFD 914
Query: 305 MHAGPTENVWLTLLSACRVH--KNVELAGKVAEKIFMIDPNNMGAYVIL 351
M W ++S C +H N +A +I I P+ + IL
Sbjct: 915 MIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSIL 963
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 13/316 (4%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT I G A+ ++R L +++ SS+L + A++ + +GK +H
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSELDLNAY--SSILQLCAEHKCLQEGKMVHSVISS 479
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFC-LLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+G+ +G+ L+ MY C + + R+F +L WN +++ + G + E +
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F++M I +FS I+ A L + K++HGC+ + GF + +SL+ Y
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYF 599
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K G + A +FD++ D+VSW ++I G ++G +H A+ F QM V + V
Sbjct: 600 KSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVN 659
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISN 304
+ AC++ G + G+ F + D+ + G L +A +
Sbjct: 660 SVAACANVGSLS-----LGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEK 714
Query: 305 MHAGPTENVWLTLLSA 320
M T W +L++A
Sbjct: 715 M-GQKTVVSWTSLIAA 729
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK- 202
++SSI+ CA L GK +H I NG + + L+ MY CG +R R IFD
Sbjct: 453 AYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHI 512
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ + + W ++ A G+ ++I LF++M+K G+ NS F +L + G + +
Sbjct: 513 LSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGEC 572
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQEAYEFISNMHAGPTENV-WLTL 317
+ K F Y V + L ++G++ A++ + G + V W ++
Sbjct: 573 KRIHGCVYK-----LGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL--GDRDVVSWNSM 625
Query: 318 LSAC 321
+S C
Sbjct: 626 ISGC 629
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 335/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L WN +I G A NG ++ A+ + +M + L+PD+FTL VL + + +G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH Y I+ G + ++ +G++LI+MYAKC V D+ R+F + V+DA+ WNS++A QN
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE + R+M ++P + +++ + A + L G+++HG R+GF N +
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVK 287
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++++A +F+++ +VSW A+I G A+HG A A+ LF++M K+ +
Sbjct: 288 TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-R 346
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FV VL ACS L+D+ + +N M +DYGI P+ +HY + DLLG G+L EAY+
Sbjct: 347 PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYD 406
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P VW LL++C++H NVELA EK+ ++P++ G YVIL+N YA + +
Sbjct: 407 LIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGK 466
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ LR M +K +KK ACSWIEVKNK YAF+AGD SH I LK L M +
Sbjct: 467 WEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHE 526
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PDT V HDVEE++K +++ HSERLAI FG+I T GT + I KNLR+C DCH A
Sbjct: 527 AGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVA 586
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFISKI++REI VRD +R+H F+ G CSCGD+W
Sbjct: 587 IKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 120/213 (56%)
Query: 42 FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
+ +S+L D + GK++H G+ N + + L+++YA + ++ LF
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P ++ WN +I G NG D + + +ML ++P + + ++ AC+ L+ + G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+ +H +I++G++ ++F+ ++L+DMYAKCG + A +FDK+ + D V W +++ A +
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
G+ ++ISL +M +GV+P V V+++ +
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSA 260
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
H ++S++ +C L+ GKQLH G N +A+ L+ +YA ++ AR +FD
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD 106
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
K+ ++ W +I G A +G +AI L+ +M G++P++ VL ACS I +
Sbjct: 107 KIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGE 166
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
S + K G AA+ D+ + G + +A
Sbjct: 167 GRSIHEYVIKS-GWERDLFVGAALIDMYAKCGCVMDA 202
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/517 (44%), Positives = 338/517 (65%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + VSWN++I G NGL EA + +M +K ++V+ + A+ ++
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQ 119
K++H I++G D ++ I ++L+ Y+KC+ ++D+ +LFC++ V++ +SW +II+G VQ
Sbjct: 314 KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQ 373
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNM 177
NG D + F QM + ++P +FSS++ ACA T ++ GKQ H C I++GF + +
Sbjct: 374 NGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNAL 433
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++S+L+ MYAK GNI A +F + D+VSW ++I G A HG ++ +FE+M
Sbjct: 434 CVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSK 493
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
++ + + F+ V++AC+HAGL+++ YF+ M KDY I P+ EHY+ + DL RAG L++
Sbjct: 494 NLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEK 553
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + I+ M +W TLL+ACRVH NV+L AEK+ + P + AYV+LSN YA
Sbjct: 554 AMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYAT 613
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A W++ A +R M K +KK SWIEVKNK ++F+AGD SHP RI L+EL R
Sbjct: 614 AGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIR 673
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GY PDTK VLHDVEEE K+ +L HSERLAI FG+I TP GT I+I+KNLRVCGDC
Sbjct: 674 LKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDC 733
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK ISKI R+I+VRD++RFHHF+ G CSCGDYW
Sbjct: 734 HTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 175/302 (57%), Gaps = 2/302 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++VSW +++ G +NGL E+AL + QM +KP+ FT ++VL A V KG
Sbjct: 153 MRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H I+ GLD+ + +G+S++NMY+K V D+ +F + ++A+SWNS+IAG V N
Sbjct: 213 VQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTN 272
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + F +M + +K F++++ CA++ + KQLH +I+NG D ++ I
Sbjct: 273 GLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIK 332
Query: 181 SSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
++L+ Y+KC I A +F M + ++VSWTA+I G +G A++LF QM + +G
Sbjct: 333 TALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEG 392
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+PN F +VL AC+ + F+S + G + + +A+ + + G ++ A
Sbjct: 393 VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESA 452
Query: 299 YE 300
E
Sbjct: 453 NE 454
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 162/319 (50%), Gaps = 1/319 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P L N ++ +RN +EALN+ + D +LS VL + D I GK
Sbjct: 53 PQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGK 112
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H I+ G +V +G+SL++MY K VED R+F + VK+ +SW S++AG QNG
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L ++ LK F QM + IKP +F++++ A + G Q+H +I++G D +F+ +
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
S+++MY+K + A+ +FD M+ + VSW ++I G +G +A LF +M +GVK
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
F V+ C++ + A + K+ G A+ + ++ +A++
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKN-GSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 302 ISNMHAGPTENVWLTLLSA 320
MH W ++S
Sbjct: 352 FCMMHGVQNVVSWTAIISG 370
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/515 (44%), Positives = 335/515 (65%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW T+I G A+NG + AL + R++ + D +SS+L + +
Sbjct: 444 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 503
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH Y IR GL +++ + + ++++Y +C V+ + R+F L+ KD +SW S+I+ V N
Sbjct: 504 KEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 562
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ F M ++P +S SI+ A A L+ L GK++HG +IR GF +A
Sbjct: 563 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 622
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYA+CG + +R +F+ + D+V WT++I +HG AI LF +ME + +
Sbjct: 623 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ +AFVAVL ACSH+GL+++ + SM +Y + P EHYA + DLLGRA L+EAY+
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQ 742
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M PT VW LL AC++H N EL A+K+ +DP N G YV++SN Y+A RR
Sbjct: 743 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERR 802
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R+ M+ G+KK P CSWIEV NK + F+A DKSHP + I L ++ E++ +
Sbjct: 803 WKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 862
Query: 421 E-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
E GYV TK VLH+ +EE+K +LY HSERLAI +G++ TP+G ++RI KNLRVCGDCH
Sbjct: 863 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 922
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK +RE+++RD +RFHHF+ G CSCGD W
Sbjct: 923 FCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 221/459 (48%), Gaps = 57/459 (12%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I + NG EAL + +M +L P+++T + L D + +G IH
Sbjct: 246 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 305
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ NV + ++LI MYA+ ++ ++ +F + D ISWNS+++G VQNGL+
Sbjct: 306 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 365
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+F+ +M A KP V+ SI+ A A TLH G Q+H ++NG D ++ + +SL
Sbjct: 366 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLH-GMQIHAYAMKNGLDSDLQVGNSL 424
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMYAK +++ CIFDKM D+VSWT +I G+A +G+ A+ LF +++ +G+ +
Sbjct: 425 VDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 484
Query: 244 VAFVAVLTACS-----------HAGLIDKAWSYF---NSMTKDYGIAPSFEHYAAVADLL 289
+ ++L ACS H+ +I K S N + YG + ++ A + +L+
Sbjct: 485 MMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI 544
Query: 290 G---------------RAGKLQEAYEFISNMHAGPTENVWLTLLS-------ACRVHKNV 327
G EA E M E ++L+S + K
Sbjct: 545 EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGK 604
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
E+ G + K F+++ + V + YA + + ++ F+RNK + W +
Sbjct: 605 EIHGFLIRKGFVLEGSLASTLV---DMYARCGTLEKSRNVFNFIRNKDL-----VLWTSM 656
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
N AY H A +L RME E PD
Sbjct: 657 IN-AYGM----------HGCGRAAIDLFRRMEDESIAPD 684
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 138/258 (53%), Gaps = 1/258 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +WN +I NG +L + R+M + D+ T +L D G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
E+HG AI+ G + V + +S++ MY KC + + +LF +P K D +SWNS+I+
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L+ F +M A + P +F + + AC + + G +H ++++ + N+F+
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++L+ MYA+ G + A IF MD D +SW +++ G +G H+A+ + +M G
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 240 KPNSVAFVAVLTACSHAG 257
KP+ VA ++++ A + +G
Sbjct: 380 KPDLVAVISIIAASARSG 397
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 153/291 (52%), Gaps = 8/291 (2%)
Query: 36 NLKPDSFTL----SSVLPIFADYVDVIKGKEIHGYAI-RHGLDANVCIGSSLINMYAKCA 90
N P F+L SSVL + + +G+++H + I + L +V + + L+ MY KC
Sbjct: 69 NQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCG 128
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
+ D+ +LF +P K +WN++I V NG L+ +R+M ++ I +F I+
Sbjct: 129 CLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILK 188
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-DLHDIV 209
AC L G ++HG I+ G+ +F+A+S++ MY KC ++ AR +FD+M + D+V
Sbjct: 189 ACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVV 248
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW ++I + +G + +A+ LF +M+K + PN+ FVA L AC + I + ++
Sbjct: 249 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 308
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
K F A +A + R GK+ EA NM T + W ++LS
Sbjct: 309 LKSSYYINVFVANALIA-MYARFGKMGEAANIFYNMDDWDTIS-WNSMLSG 357
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/518 (42%), Positives = 331/518 (63%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV+WN++I G + G A+ + M + + PD TL S+ A D+ G
Sbjct: 231 MSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGG 290
Query: 61 KEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +H Y +R G D ++ G+++++MYAK +++E + R+F +PV+DA+SWN++I G +Q
Sbjct: 291 RSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQ 350
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E + + M + +KP +F S++PA +HL L G ++H I+ G + +++
Sbjct: 351 NGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVY 410
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + ++D+YAKCG + A +F++ W AVI G +HG+ A+SLF QM+++G
Sbjct: 411 VGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEG 470
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V FV++L ACSHAGL+D+ ++FN M YGI P +HYA + D+ GRAG+L +A
Sbjct: 471 ISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDA 530
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
++FI NM P +W LL ACR+H NVE+ ++ +F +DP N+G YV++SN YA
Sbjct: 531 FDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKV 590
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS--HPFYHRINEALKELLE 416
+W +R +R + ++KTP S IEVK F +G++ HP + I L +LL
Sbjct: 591 GKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLA 650
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ GYVPD VL DVEE++K+ +L HSERLAI FGII TP T + I KNLRVCGD
Sbjct: 651 KIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGD 710
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH A K+ISKI +REIIVRD++RFHHF+DG CSCGD+W
Sbjct: 711 CHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 173/325 (53%), Gaps = 10/325 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ +WN ++ GL RN EA+ + +M + D+ T+SSVLP+ D +H
Sbjct: 134 DVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMH 193
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YA++HGLD + + +++I++Y K +E+ ++F + +D ++WNSII+G Q G
Sbjct: 194 LYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVA 253
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SSL 183
++ F M + + P ++ S+ A A + G+ +H ++R G+D IA +++
Sbjct: 254 SAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAI 313
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVKPN 242
+DMYAK I A+ +FD M + D VSW +I G +G A +AI +++ M+K +G+KP
Sbjct: 314 VDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPI 373
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA---Y 299
FV+VL A SH G + + + ++++ G+ V DL + GKL EA +
Sbjct: 374 QGTFVSVLPAYSHLGALQQG-TRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLF 432
Query: 300 EFISNMHAGPTENVWLTLLSACRVH 324
E GP W ++S VH
Sbjct: 433 EQTPRRSTGP----WNAVISGVGVH 453
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 9/284 (3%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRL 98
D+FT P+ ++H A+R GL + +L++ Y + RV D++R
Sbjct: 70 DAFTFP---PLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F + +D +WN++++G +N E + F +M++ + V+ SS++P C L
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
L +H +++G DD +F+ ++++D+Y K G + R +FD M D+V+W ++I G+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
G A+ +F M GV P+ + +++ +A + G I S M +
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
A+ D+ + K++ A +M P + W TL++
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSM---PVRDAVSWNTLITG 347
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 328/514 (63%), Gaps = 2/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN+++VG R+GL EEAL + + M N+K D +T SVL V I
Sbjct: 326 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV--VGSINP 383
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG I+ G + + ++L++MYAK ++ ++ +F + KD ISW S++ G QN
Sbjct: 384 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN 443
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E LK F M + + P +SI+ ACA LT L GKQ+H I++G + +
Sbjct: 444 NSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVY 503
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MYAKCG + A IF M + D+++WTA+I+G A +G +++ ++ M G +
Sbjct: 504 NSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTR 563
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSHAGL+D+ YF M K YGI P EHYA + DL GR+GKL EA +
Sbjct: 564 PDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQ 623
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M P VW +LLSACRVH+N+ELA + A +F ++P N YV+LSN Y+A+R+
Sbjct: 624 LLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRK 683
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A +R M++KG+ K P CSW+E+ ++ F++ D+ HP I + E++ R+++
Sbjct: 684 WNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKE 743
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD LHD+++E K+ L YHSE+LA+ FG++ P IRI KNLRVCGDCH+A
Sbjct: 744 AGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSA 803
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K+IS++ R II+RD++ FHHF +G+CSCGDYW
Sbjct: 804 MKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 44/342 (12%)
Query: 1 MPVSDLVSWNTVI-------------------------------VGLARNGLYEEALNIV 29
MP D SWNT+I G + G EA ++
Sbjct: 91 MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 150
Query: 30 RQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC 89
R M K FTL SVL + + + G+ IHG+ +++G + NV + + L++MYAKC
Sbjct: 151 RSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKC 210
Query: 90 ARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
V ++ LF L K+ + W +++ G QNG + ++FFR M ++ +F +
Sbjct: 211 KCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT 270
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ AC+ + G+Q+HG I+++GF N+++ S+L+DMYAKCG+++ A+ + + M+ D
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSW ++++G HG +A+ LF+ M +K + F +VL C + K+
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS----- 385
Query: 268 SMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISNM 305
I FE+Y A+ D+ + G + AY M
Sbjct: 386 --VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM 425
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/506 (44%), Positives = 324/506 (64%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN +I G A +G + +L + +M LKPD F L A D+ +GK IH + +
Sbjct: 786 WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
G ++ + ++L++MYAKC +E + +F + V+D +SW S+I+G NG E L
Sbjct: 846 CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLG 905
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FF M + + P VS S++ AC +L L G+ H +I+ GF+ ++ +A++++DMY+
Sbjct: 906 FFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYS 965
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG++ LARC+FD+ D+V W+A+I +HG+ AI LF+QM K GV+P+ V F
Sbjct: 966 KCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTC 1025
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL+ACSH+GL+++ YF MT+++ IA +YA + DLLGRAG+L EA + I NM
Sbjct: 1026 VLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 1085
Query: 309 PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLR 368
P ++W +LL ACR+H N++LA K+A+ +F +DP + G +V+LSN YAA RW + +R
Sbjct: 1086 PDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVR 1145
Query: 369 VFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTK 428
M +G K S +E N+ + F GD+SHP + ++ L+EL M+ GYVP T
Sbjct: 1146 KMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTD 1205
Query: 429 EVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIV 488
VLHD+EEE K+ L YHSERLAI FG+I T GTT+RI KNLR+CGDCH AIK ISKIV
Sbjct: 1206 FVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIV 1265
Query: 489 QREIIVRDNSRFHHFEDGKCSCGDYW 514
R I+VRD RFH FEDG CSCGDYW
Sbjct: 1266 NRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 268/435 (61%), Gaps = 1/435 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SW+T+I A N EALN+ +M +P+S T+ S L A ++ +G
Sbjct: 267 MPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 326
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH A+ G + + + ++LI+MY KC+ +++ LF LP KD +SW ++++G QN
Sbjct: 327 KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQN 386
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+ + + FR ML I+P V+ I+ A + L LHG ++R+GF+ N+F+
Sbjct: 387 GMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVG 446
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-V 239
+SL+++Y+KCG++ A +F M + D+V W+++I +HG +A+ +F+QM K+ V
Sbjct: 447 ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTV 506
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN+V F+++L+ACSHAGL+++ F+ M DY + P EH+ + DLLGR G+L +A
Sbjct: 507 RPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAM 566
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I+ M +VW LL ACR+H N+E+ A+ +F +DP++ G Y++LSN YA
Sbjct: 567 DIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDG 626
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W + A LR ++ +G+KK S +EV+ ++F+A D+ HP +I E L++L +M
Sbjct: 627 KWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMG 686
Query: 420 QEGYVPDTKEVLHDV 434
+E Y+PD +LHD
Sbjct: 687 KEVYIPDLDFLLHDT 701
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 185/352 (52%), Gaps = 6/352 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
D V W +++ G +N EEAL + QM ++ + D TL SV+ A ++V G +
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCV 228
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG IR D ++ + +SL+N+YAK + + LF +P KD ISW+++IA N
Sbjct: 229 HGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAA 288
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L F +M+ + +P V+ S + ACA L GK++H + GF+ + ++++L
Sbjct: 289 NEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTAL 348
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMY KC A +F ++ D+VSW A++ G A +G A+ ++ +F M DG++P++
Sbjct: 349 IDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDA 408
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
VA V +L A S G+ +A + + G + A++ +L + G L +A +
Sbjct: 409 VAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFK 467
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF---MIDPNNMGAYVILS 352
M +W ++++A +H A ++ +++ + PNN+ ILS
Sbjct: 468 GMIVRDVV-IWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS 518
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 170/326 (52%), Gaps = 13/326 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P ++ WN+ + R +EE L + M PD+FT+ L A + G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K IHG+A ++ + +++ +GS+L+ +Y+KC ++ ++ ++F D + W S++ G Q
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 120 NGLFDEGLKFFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
N +E L F QM++ + P V+ S++ ACA L + G +HG +IR FD +
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGD 240
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + +SLL++YAK G ++A +F KM D++SW+ +I A + A++A++LF +M +
Sbjct: 241 LPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE 300
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+PNSV V+ L AC+ + +++ + + G F A+ D+ +
Sbjct: 301 KRFEPNSVTVVSALQACAVSRNLEEG-KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPD 359
Query: 297 EAYEFISNMHAGPTENV--WLTLLSA 320
EA + + P ++V W+ LLS
Sbjct: 360 EAVDLFQRL---PKKDVVSWVALLSG 382
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 137/264 (51%), Gaps = 2/264 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+ H +GL + I + MY R++ + +F +P + WN +I G +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F L+ + +M+ +KP +F + +CA L+ L GK +H ++ G +++F+
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+I AR +FDKM + D+VSWT++I G A +G + + F+ M GV
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V+ ++VL AC + G + K +F+S G A+ D+ + G L A
Sbjct: 917 PNRVSILSVLLACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA-R 974
Query: 301 FISNMHAGPTENVWLTLLSACRVH 324
+ + AG W ++++ +H
Sbjct: 975 CLFDETAGKDLVCWSAMIASYGIH 998
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 33/253 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DLVSW ++I G A NG E L M + + P+ ++ SVL + + KG
Sbjct: 879 MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H Y I+ G + ++ + +++++MY+KC ++ + LF KD + W+++IA +
Sbjct: 939 EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIH 998
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F QM+ A ++P HV+F+ ++ AC+H L GK + F+
Sbjct: 999 GHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEE------FVI 1052
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L YA C+ D ++G A G +A+ L E M V+
Sbjct: 1053 ARKLSNYA---------CMVD-------------LLGRA--GQLSEAVDLIENMP---VE 1085
Query: 241 PNSVAFVAVLTAC 253
P++ + ++L AC
Sbjct: 1086 PDASIWGSLLGAC 1098
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H + G+ + + L ++YAKCA ++ + ++F P + WNS + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 122 LFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
++E L+ F M+ A P + + + ACA L L LGK +HG +N +MF+
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDG 238
S+L+++Y+KCG + A +F++ D V WT+++ G + + +A++LF QM D
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 239 VKPNSVAFVAVLTACSH 255
V + V V+V++AC+
Sbjct: 202 VVLDPVTLVSVVSACAQ 218
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/515 (44%), Positives = 334/515 (64%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW T+I G A+NG + AL + R++ + D +SS+L + +
Sbjct: 480 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 539
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH Y IR GL +++ + + ++++Y +C V+ + R+F L+ KD +SW S+I+ V N
Sbjct: 540 KEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 598
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ F M ++P +S SI+ A A L+ L GK++HG +IR GF +A
Sbjct: 599 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 658
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYA+CG + +R +F+ + D+V WT++I +HG AI LF +ME + +
Sbjct: 659 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ +AFVAVL ACSH+GL+++ + SM +Y + P EHY + DLLGRA L+EAY+
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQ 778
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M PT VW LL AC++H N EL A+K+ +DP N G YV++SN YAA RR
Sbjct: 779 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERR 838
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R+ M+ G+KK P CSWIEV NK + F+A DKSHP + I L ++ E++ +
Sbjct: 839 WKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 898
Query: 421 E-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
E GYV TK VLH+ +EE+K +LY HSERLAI +G++ TP+G ++RI KNLRVCGDCH
Sbjct: 899 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 958
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK +RE+++RD +RFHHF+ G CSCGD W
Sbjct: 959 FCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 218/458 (47%), Gaps = 55/458 (12%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I + NG EAL + +M +L P+++T + L D + +G IH
Sbjct: 282 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 341
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ NV + ++LI MYA+ ++ ++ +F + D ISWNS+++G VQNGL+
Sbjct: 342 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 401
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+F+ +M A KP V+ SI+ A A G Q+H ++NG D ++ + +SL+
Sbjct: 402 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLV 461
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAK +++ CIFDKM D+VSWT +I G+A +G+ A+ LF +++ +G+ + +
Sbjct: 462 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 521
Query: 245 AFVAVLTACS-----------HAGLIDKAWSYF---NSMTKDYGIAPSFEHYAAVADLLG 290
++L ACS H+ +I K S N + YG + ++ A + +L+
Sbjct: 522 MISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIE 581
Query: 291 ---------------RAGKLQEAYEFISNMHAGPTENVWLTLLS-------ACRVHKNVE 328
G EA E M E ++L+S + K E
Sbjct: 582 FKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKE 641
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+ G + K F+++ + V + YA + + ++ F+RNK + W +
Sbjct: 642 IHGFLIRKGFVLEGSLASTLV---DMYARCGTLEKSRNVFNFIRNKDL-----VLWTSMI 693
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
N AY H A +L RME E PD
Sbjct: 694 N-AYGM----------HGCGRAAIDLFRRMEDESIAPD 720
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 138/258 (53%), Gaps = 1/258 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +WN +I NG +L + R+M + D+ T +L D G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
E+HG AI+ G + V + +S++ MY KC + + +LF +P K D +SWNS+I+
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L+ F +M A + P +F + + AC + + G +H ++++ + N+F+
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++L+ MYA+ G + A IF MD D +SW +++ G +G H+A+ + +M G
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415
Query: 240 KPNSVAFVAVLTACSHAG 257
KP+ VA ++++ A + +G
Sbjct: 416 KPDLVAVISIIAASARSG 433
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 153/291 (52%), Gaps = 8/291 (2%)
Query: 36 NLKPDSFTL----SSVLPIFADYVDVIKGKEIHGYAI-RHGLDANVCIGSSLINMYAKCA 90
N P F+L SSVL + + +G+++H + I + L +V + + L+ MY KC
Sbjct: 105 NQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCG 164
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
+ D+ +LF +P K +WN++I V NG L+ +R+M ++ I +F I+
Sbjct: 165 CLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILK 224
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-DLHDIV 209
AC L G ++HG I+ G+ +F+A+S++ MY KC ++ AR +FD+M + D+V
Sbjct: 225 ACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVV 284
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW ++I + +G + +A+ LF +M+K + PN+ FVA L AC + I + ++
Sbjct: 285 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 344
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
K F A +A + R GK+ EA NM T + W ++LS
Sbjct: 345 LKSSYYINVFVANALIA-MYARFGKMGEAANIFYNMDDWDTIS-WNSMLSG 393
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/512 (42%), Positives = 337/512 (65%), Gaps = 1/512 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +VSW ++I R GLY +A+ + +M + ++PD +T++S++ A + KG
Sbjct: 357 MGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 416
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y I++G+ +N+ + ++LINMYAKC VE++ +F +PVKD +SWN++I G QN
Sbjct: 417 RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 476
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L+ F M + KP ++ + ++PACA L L G+++HG I+R G+ ++ +A
Sbjct: 477 LLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVA 535
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+L+DMYAKCG + LA+ +FD + D++SWT +I G +HG ++AIS F +M G++
Sbjct: 536 CALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE 595
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ +F A+L ACSH+GL+++ W +FNSM + G+ P EHYA V DLL R G L +AY+
Sbjct: 596 PDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYK 655
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P +W LLS CR+H +V+LA KVAE IF ++P+N YV+L+N YA A +
Sbjct: 656 FIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEK 715
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ LR M+ +G K+ P CSWIEV K FVAG+ HP +I+ L +L +M+
Sbjct: 716 WEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQN 775
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
E Y + VL + ++ +K+ + HSE+ A+ FGI+ P G T+R+ KN RVCGDCH
Sbjct: 776 EDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEM 835
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
KF+SK + EI++RD++RFHHF+DG CSC D
Sbjct: 836 GKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 175/314 (55%), Gaps = 6/314 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ A+ G + E++++ ++M + + + +T + VL FA V + K +HGY +
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 222
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +N + +SLI Y K VE +H LF L D +SWNS+I GCV NG GL+
Sbjct: 223 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 282
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QMLI ++ + S++ ACA++ L LG+ LHG ++ F + + +++LLDMY+
Sbjct: 283 IFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 342
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ A +F KM IVSWT++I G DAI LF++M+ GV+P+ +
Sbjct: 343 KCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 402
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
++ AC+ + +DK + + K+ G+ + A+ ++ + G ++EA S +
Sbjct: 403 IVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKI--- 458
Query: 309 PTENV--WLTLLSA 320
P +++ W T++
Sbjct: 459 PVKDIVSWNTMIGG 472
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 147/258 (56%), Gaps = 1/258 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G NG L I QM + ++ D TL SVL A+ ++ G+ +H
Sbjct: 260 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALH 319
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ V ++L++MY+KC + + +F + +SW SIIA V+ GL+
Sbjct: 320 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYS 379
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M ++P + +SI+ ACA ++L G+ +H +I+NG N+ + ++L+
Sbjct: 380 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI 439
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MYAKCG++ AR +F K+ + DIVSW +I G + + ++A+ LF M+K KP+ +
Sbjct: 440 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDI 498
Query: 245 AFVAVLTACSHAGLIDKA 262
VL AC+ +DK
Sbjct: 499 TMACVLPACAGLAALDKG 516
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 146/316 (46%), Gaps = 14/316 (4%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N I G A+ ++ + + L +S+ SVL + A+ + GK +H I
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G+ + +G+ L+ MY C + ++F + WN +++ + G F E +
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M + +F+ ++ A L + K++HG +++ GF N + +SL+ Y K
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
G + A +FD++ D+VSW ++I G ++G + + + +F QM GV+ + V+V
Sbjct: 243 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 302
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEAYEFISNM 305
L AC++ G + +G+ F + D+ + G L A E M
Sbjct: 303 LVACANIGNLS-----LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Query: 306 HAGPTENV-WLTLLSA 320
G T V W ++++A
Sbjct: 358 --GDTTIVSWTSIIAA 371
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/545 (42%), Positives = 325/545 (59%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++++WN ++ GL R+G +A+ + +M PD+ +S L D DV G+++H
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLH 179
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF----------CLLPVK--------- 105
GY ++ G + C+ ++LI+MY KC R ++ R+F C V
Sbjct: 180 GYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVS 239
Query: 106 ----------------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+ +SW SI+A CVQNG E + FR+M I+P V+ ++
Sbjct: 240 EALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVL 299
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
PA A++ L G+ H +R GF ++++ S+L+DMYAKCG +R AR IF+ M ++V
Sbjct: 300 PAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVV 359
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW A+I G A+HG A +A+ LF M+ KP+ V F VL ACS AG ++ SYFN M
Sbjct: 360 SWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEM 419
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+GI+P EHYA + LLGRAGKL +AY+ I+ M P +W +LL +CRVH NV L
Sbjct: 420 QHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVL 479
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AE +F ++P N G YV+LSN YA+ + W LR M+ G+KK CSWIE+KN
Sbjct: 480 AEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKN 539
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + +AGD SHP I E LK L M + G+ P T VLHDVEE++K ++L HSE+
Sbjct: 540 KVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEK 599
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ G+I T GT +++IKNLR+CGDCH A+KFIS +REI VRD +RFHHF+DGKCS
Sbjct: 600 LAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCS 659
Query: 510 CGDYW 514
C DYW
Sbjct: 660 CADYW 664
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G + F+ASSLL Y + G AR + D M +V W+A+I +A HG+A A L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAG 257
E+M DGV+PN + + +++ + +G
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSG 135
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSWN +I G A +G E A+ + R M + KPD T + VL + +G
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEG 412
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
+ + +HG+ + + ++ + + +++D++ + +P + D W S++ C
Sbjct: 413 RSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCR 472
Query: 119 QNG 121
+G
Sbjct: 473 VHG 475
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 334/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +I R GLY++ + ++MG +PD F ++S L FA + G
Sbjct: 358 MVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHG 417
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGYAIR+G++ + + ++L+ MY KC +E++ +F + KD ISWN++I G +N
Sbjct: 418 KSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRN 477
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E F +ML+ +++P V+ + I+PA A L++L G+++H +R G+ ++ F+A
Sbjct: 478 NLANEAFSLFTEMLL-QLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVA 536
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG + LAR +FD++ +++SWT ++ G +HG DAI+LFEQM G+
Sbjct: 537 NALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIA 596
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P++ +F A+L ACSH+GL D+ W +F++M K++ I P +HY + DLL G L+EAYE
Sbjct: 597 PDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYE 656
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P ++W++LL CR+H+NV+LA +VAE++F ++P N G YV+L+N YA A R
Sbjct: 657 FIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAER 716
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ L+ + +G+++ CSWIE K K + F+A +++HP RI E L E+ +RM++
Sbjct: 717 WEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQE 776
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EG+ P K L + L HS +LA+ FG++ +G IR+ KN RVC CH A
Sbjct: 777 EGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEA 836
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ REII+RD++RFHHFE G+CSC YW
Sbjct: 837 AKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 158/303 (52%), Gaps = 10/303 (3%)
Query: 1 MP-VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP VSD+ W ++ G A+ G E + + R+M ++PD++T+S VL A +
Sbjct: 155 MPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIED 214
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +HG + G + +G++L+ YAK R +D+ +F +P +D ISWNS+I+GC
Sbjct: 215 GEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTS 274
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NGL+D+ ++ F +M + + + S++PACA L L LG+ +HG ++ GF +
Sbjct: 275 NGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSL 334
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+ LLDMY+ C + R IF M ++VSWTA+I G LF++M +G
Sbjct: 335 ANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGT 394
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG----RAGKL 295
+P+ A + L A + L+ S Y I E AV + L + G +
Sbjct: 395 RPDIFAITSALHAFAGNELLKHGKS-----VHGYAIRNGMEKVLAVTNALMEMYVKCGNM 449
Query: 296 QEA 298
+EA
Sbjct: 450 EEA 452
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 152/262 (58%), Gaps = 1/262 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SWN++I G NGLY++A+ + +M + DS TL SVLP A+ + G
Sbjct: 257 MPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLG 316
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HGY+++ G + + + L++MY+ C+ ++++F + K+ +SW ++I +
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA 376
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL+D+ F++M + +P + +S + A A L GK +HG IRNG + + +
Sbjct: 377 GLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT 436
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY KCGN+ A+ IFD + D++SW +I G + + A++A SLF +M ++
Sbjct: 437 NALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LR 495
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
PN+V +L A + +++
Sbjct: 496 PNAVTMTCILPAAASLSSLERG 517
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 21/295 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P SD+ N I L R+G EEAL ++ G D + +VL + ++ + G
Sbjct: 59 VPTSDV---NLHIQRLCRSGDLEEALGLLGSDG-----VDDRSYGAVLQLCSEVRSLEGG 110
Query: 61 KEIH-----GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSII 114
K H R G+D NV +G L+ MY KC +E++ R+F +P V D W +++
Sbjct: 111 KRAHFLVRASSLGRDGMD-NV-LGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALM 168
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+G + G EG+ FR+M ++P + S ++ A L ++ G+ +HG + + GF
Sbjct: 169 SGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFG 228
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ ++L+ YAK + A +FD M D++SW ++I G +G AI LF +M
Sbjct: 229 SQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRM 288
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
+G + +S ++VL AC+ L+ + + Y + F ++A++L
Sbjct: 289 WLEGEELDSATLLSVLPACAELHLL-----FLGRVVHGYSVKTGFISQTSLANVL 338
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 144 SFSSIMPACAHLTTLHLGKQLH-----GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
S+ +++ C+ + +L GK+ H + R+G D+ + L+ MY KCG++ AR
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDN--VLGQKLVLMYLKCGDLENARR 150
Query: 199 IFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+FD+M + D+ WTA++ G A G+ + + LF +M GV+P++ VL + G
Sbjct: 151 VFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLG 210
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WL 315
I+ + + + G A+ ++ + ++A M P +V W
Sbjct: 211 SIEDG-EVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGM---PHRDVISWN 266
Query: 316 TLLSAC 321
+++S C
Sbjct: 267 SMISGC 272
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 338/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSWN+++ G +NG E+A+ + +M + P T+ L AD D+ +G
Sbjct: 309 MDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + L +++ + +SLI+MY+KC RV+ + +F L + +SWN++I G QN
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F +M +KP + S++PA A L+ K +HG IIR+ D N+F+
Sbjct: 429 GRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT 488
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+KCG I +AR +FD + +++W A+I G HG A+ LF++M+K V+
Sbjct: 489 TALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVE 548
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +++V++ACSH+GL+D+ +F SM +DYG+ PS +HY A+ DLLGRAG+++EA++
Sbjct: 549 PNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWD 608
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P V+ +L AC++HKN+E+ K A+K+F ++P+ G +V+L+N YA+ +
Sbjct: 609 FIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 668
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M KG+KKTP CS +E++N+ ++F +G +HP RI L+EL+ ++
Sbjct: 669 WSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKA 728
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT +L DVE++ ++ LL HSE+LAI FG++ T GTTI + KNLRVCGDCH A
Sbjct: 729 AGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNA 787
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS + REIIVRD RFHHF++G CSCGDYW
Sbjct: 788 TKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 159/263 (60%), Gaps = 2/263 (0%)
Query: 2 PVSDLVS--WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
P+ D + ++T++ G A+N E AL + +M ++KP + + +L + D D+ +
Sbjct: 106 PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKR 165
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHG I + ANV + ++NMYAKC +++D++++F +P +D +SWN+IIAG Q
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L+ +M +P ++ +++PA A + L +GK +HG IR GF + I
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L DMY+KCG++ AR IFD MD +VSW +++ G +G AI++FE+M ++G+
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 240 KPNSVAFVAVLTACSHAGLIDKA 262
P V + L AC+ G +++
Sbjct: 346 DPTGVTIMEALHACADLGDLERG 368
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 153/254 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ++NG ++AL +V +M + +PDS TL +VLP AD ++ G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHGYAIR G V I ++L +MY+KC VE + +F + K +SWNS++ G VQN
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ + F +ML I P V+ + ACA L L GK +H + + ++ +
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+KC + +A IF+ ++ VSW A+I+G A +G +A++ F +M+ G+K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 241 PNSVAFVAVLTACS 254
P+S V+V+ A +
Sbjct: 448 PDSFTMVSVIPALA 461
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 11/292 (3%)
Query: 61 KEIHG---YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS--WNSIIA 115
KE+H I++GL + L+++++K + ++ R+F P+ D + +++++
Sbjct: 63 KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVF--EPIDDKLDALYHTMLK 120
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G +N + L F +M +KP +F+ ++ C L GK++HG +I N F
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F + +++MYAKC I A +FD+M D+VSW +I G + +G A A+ L +M+
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+G +P+S+ V VL A + GL+ S + G A A+AD+ + G +
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIR-AGFAKLVNISTALADMYSKCGSV 299
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNM 345
+ A M T W +++ + E A V EK+ IDP +
Sbjct: 300 ETARLIFDGMDQ-KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/510 (44%), Positives = 332/510 (65%), Gaps = 1/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW ++I G +NGL EAL I QM N+KPD L SVL + D D+ +GK IH
Sbjct: 234 NIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIH 293
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL+ + SL MYAKC +V + F + + + + WN++I+G +NG +
Sbjct: 294 GCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTN 353
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + F++M+ I+ ++ S + ACA + +L L K + I + + +++F+ ++L+
Sbjct: 354 EAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALI 413
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DM+AKCG++ LAR +FD+ D+V W+A+I+G LHG DAI LF M++ GV PN V
Sbjct: 414 DMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDV 473
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV +LTAC+H+GL+++ W F+SM K YGI +HYA V DLLGR+G L EAY+FI+
Sbjct: 474 TFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITT 532
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +VW LL AC+++++V L AE++F +DP N G YV LSN YA++R W
Sbjct: 533 MPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSV 592
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R+ MR KG+ K S IE+ K AF GDKSHP + I E L+ L R+++ G++
Sbjct: 593 AKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFI 652
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P + VLHD+ +E+K+ L HSERLAI +G+I T GTT+RI KNLR C +CH+A K I
Sbjct: 653 PHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLI 712
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+V REI+VRD +RFHHF++G CSC DYW
Sbjct: 713 SKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 148/262 (56%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P + WN +I G + + + +A+ + +M + PD FTL VL + + G
Sbjct: 129 FPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVG 188
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG R G +++V + + L+ +YAKC RVE + +F L ++ +SW S+I+G QN
Sbjct: 189 KRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN 248
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F QM +KP ++ S++ A + L GK +HGC+++ G + +
Sbjct: 249 GLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLL 308
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SL MYAKCG + +AR FD+M++ +++ W A+I G A +G ++A+ LF++M ++
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIR 368
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
+S+ + + AC+ G +D A
Sbjct: 369 TDSITVRSAILACAQVGSLDLA 390
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH + GL + + + +N + + ++F P WN+II G +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F + ++ + +M + + P + ++ AC+ + L +GK++HG I R GF+ ++F+ +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+ +YAKCG + AR +F+ +D +IVSWT++I G +G +A+ +F QM + VKP
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +A V+VL A + +++ S + K G+ + ++ + + G++ A F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVK-MGLEFEPDLLISLTAMYAKCGQVMVARSF 327
Query: 302 ISNMHAGPTENVWLTLLSA 320
M P +W ++S
Sbjct: 328 FDQMEI-PNVMMWNAMISG 345
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +++ WN +I G A+NG EA+ + ++M + N++ DS T+ S + A +
Sbjct: 331 MEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLA 390
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + Y + +V + ++LI+M+AKC V+ + +F KD + W+++I G +
Sbjct: 391 KWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLH 450
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F M A + P V+F ++ AC H + G +L + G +
Sbjct: 451 GRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHY 510
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
+ ++D+ + G++ A M + VS ++G
Sbjct: 511 ACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/547 (40%), Positives = 337/547 (61%), Gaps = 35/547 (6%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D+VSW ++ GL L + +MG +KP+S TLSS+LP ++ D+ G+
Sbjct: 195 VKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRA 254
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN----------- 111
IHG+A+RHG+ NV + S+L+++YA+C V+ + +F L+P +D +SWN
Sbjct: 255 IHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNRE 314
Query: 112 ------------------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
++I GC++NG ++ ++ R+M KP ++ SS
Sbjct: 315 YDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISS 374
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
+PAC+ L +L +GK++H + R+ ++ ++L+ MYAKCG++ L+R +FD + D
Sbjct: 375 FLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKD 434
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+V+W +I+ NA+HGN + + LFE M + G+KPNSV F VL+ CSH+ L+++ FN
Sbjct: 435 VVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFN 494
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SM +D+ + P HYA + D+ RAG+L EAYEFI M PT + W LL ACRV+KNV
Sbjct: 495 SMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNV 554
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
ELA A K+F I+PNN G YV L N A+ W +A+ R+ M+ +G+ KTP CSW++V
Sbjct: 555 ELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQV 614
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
++ + FV GDK++ +I L EL E+M+ GY PDT VL D+++E+K L HS
Sbjct: 615 GDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHS 674
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LA+ FGI+ ++IR+ KNLR+CGDCH AIK++SK+V IIVRD+ RFHHF +G
Sbjct: 675 EKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGN 734
Query: 508 CSCGDYW 514
CSC D W
Sbjct: 735 CSCQDLW 741
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 8/307 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D + +T+I GL EA+ + + +KP + +V D +
Sbjct: 92 IPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRV 151
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H AIR G+ ++ +G++LI+ Y KC VE + R+F L VKD +SW S+ + V
Sbjct: 152 KEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNC 211
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL GL F +M +KP V+ SSI+PAC+ L L G+ +HG +R+G +N+F+
Sbjct: 212 GLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVC 271
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ +YA+C +++ AR +FD M D+VSW V+ + ++LF QM GV+
Sbjct: 272 SALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVE 331
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP------SFEHYAAVADLLGRAGK 294
+ + AV+ C G +KA M ++ G P SF ++ + L R GK
Sbjct: 332 ADEATWNAVIGGCMENGQTEKAVEMLRKM-QNLGFKPNQITISSFLPACSILESL-RMGK 389
Query: 295 LQEAYEF 301
Y F
Sbjct: 390 EVHCYVF 396
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+G L+ + +LF +P D + +++I+ GL +E ++ + +
Sbjct: 68 LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
IKP + F ++ AC K++H IR G + F+ ++L+ Y KC + AR
Sbjct: 128 IKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGAR 187
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+FD + + D+VSWT++ G +++F +M +GVKPNSV ++L ACS
Sbjct: 188 RVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSE 245
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL G+ R A+ +FD + D + + +I G ++AI L+ + G+KP+
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 243 SVAFVAVLTACSHAG 257
+ F+ V AC +G
Sbjct: 132 NSVFLTVAKACGASG 146
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/516 (42%), Positives = 325/516 (62%), Gaps = 12/516 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ +WN ++ GL + E L + R+M + PD FTL SVL A GK++H
Sbjct: 53 NVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVH 112
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y +++G + N+ +GSSL +MY K + + ++ + +++ ++WN++IAG QNG F+
Sbjct: 113 AYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFE 172
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L + M ++ ++P ++ S++ + A L TL G+Q+H I+ G + + + SSL+
Sbjct: 173 GVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLI 232
Query: 185 DMYAKCGNIRLARCIFDKM------DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
MY+KCG C+ D M + D V W+++I HG +A+ LFEQME++G
Sbjct: 233 SMYSKCG------CLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEG 286
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ N V F+++L ACSH GL +K +F M + YG+ P EHY V DLLGR+G L EA
Sbjct: 287 LGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEA 346
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
I +M +W TLLSACR+H+N ++A + AE+I ++P + YV+LSN +A+A
Sbjct: 347 EAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASA 406
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+RWKD + +R MR++ +KK P SW+EVKN+ + F GDKSHP I+ LKEL+E M
Sbjct: 407 KRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEM 466
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPDT V HD + E+K+N L HSE+LAI FG++ P G+ IR++KNLR+C DCH
Sbjct: 467 KLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCH 526
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS I REIIVRD SRFHHF+ GKCSCGDYW
Sbjct: 527 VAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + ++V+WNT+I G A+NG +E L++ M L+PD TL SV+ A+ + +G
Sbjct: 150 MRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQG 209
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI+ G ++ V + SSLI+MY+KC +EDS + D++ W+S+IA +
Sbjct: 210 QQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFH 269
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFI 179
G +E + F QM + V+F S++ AC+H G ++ + G +
Sbjct: 270 GRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEH 329
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A + M L D+V W ++ +H NA A E++ +
Sbjct: 330 YTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILR-- 387
Query: 239 VKPNSVAFVAVLT 251
+ P A +L+
Sbjct: 388 LNPQDSATYVLLS 400
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 133/263 (50%), Gaps = 2/263 (0%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ + LIN + + ++ + ++F + ++ +WN++++G +Q + GL FR+M
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
P + S++ CA L + GKQ+H +++ G++ N+ + SSL MY K G++
Sbjct: 82 ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ M + ++V+W +I GNA +G+ + L+ M+ G++P+ + V+V+++ +
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVW 314
+ + K G + +++ + + G L+++ + + + P +W
Sbjct: 202 ELATLFQGQQIHAEAIK-AGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEH-PDSVLW 259
Query: 315 LTLLSACRVHKNVELAGKVAEKI 337
++++A H E A + E++
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQM 282
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/514 (45%), Positives = 335/514 (65%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL++WN +I G ++ EAL++ +M + + TLS++L A V
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 452
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG +++ G +++ + +SLI+ Y KC+ VED+ R+F + D +S+ S+I Q
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 512
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E LK F +M ++KP SS++ ACA+L+ GKQLH I++ GF ++F
Sbjct: 513 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 572
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MYAKCG+I A F ++ IVSW+A+I G A HG+ A+ LF QM K+GV
Sbjct: 573 NSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVS 632
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V+VL AC+HAGL+ +A YF SM + +G P EHYA + DLLGRAGK+ EA E
Sbjct: 633 PNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 692
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M +VW LL A R+HK+VEL + AE +F+++P G +V+L+N YA+A +
Sbjct: 693 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGK 752
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A +R MR+ +KK P SWIEVK+K Y F+ GD+SH I L EL + M++
Sbjct: 753 WENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDK 812
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP + LHDVE+ +K+ LLY+HSE+LA+ FG+I TP G IR+ KNLRVC DCHTA
Sbjct: 813 AGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTA 872
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+I KIV REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 873 FKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 140/232 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSW+ +I G A+NGL AL +M + +K + FT SSVL + D+ GK++H
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G + G + +V + ++L+ MYAKC DS RLF +P ++ +SWN++ + VQ
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCG 240
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + F +M+++ IKP S SS++ AC L GK +HG +I+ G+D + F A++L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
DMYAK G++ A +F+K+ DIVSW AVI G LH + A+ L QM++
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 154/301 (51%), Gaps = 28/301 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN VI G + +E+AL ++ QM +++H
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMK---------------------------RQLH 355
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ +++++ + L++MY+KC +ED+ F LLP KD I+WN+II+G Q
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F +M I + S+I+ + A L +H+ +Q+HG +++GF ++++ +SL+
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 475
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y KC ++ A IF++ + D+VS+T++I A +G +A+ LF +M+ +KP+
Sbjct: 476 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 535
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++L AC++ ++ + K YG ++ ++ + G + +A S
Sbjct: 536 VCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 594
Query: 305 M 305
+
Sbjct: 595 L 595
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 159/310 (51%), Gaps = 14/310 (4%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
N P S + S +L + G +IH + + GL + I + LIN+Y+KC +
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYA 110
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+L D +SW+++I+G QNGL L F +M + +K +FSS++ AC+ +
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L +GKQ+HG ++ +GF+ ++F+A++L+ MYAKC ++ +FD++ ++VSW A+
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+A+ LF +M G+KPN + +++ AC+ GL D S + Y I
Sbjct: 231 SCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRD---SSRGKIIHGYLI 285
Query: 276 APSFE----HYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKN----V 327
++ A+ D+ + G L +A + P W +++ C +H++ +
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQAL 344
Query: 328 ELAGKVAEKI 337
EL G++ ++
Sbjct: 345 ELLGQMKRQL 354
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 131/258 (50%), Gaps = 29/258 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSWN + + EA+ + +M +KP+ F+LSS++ D +G
Sbjct: 218 IPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHGY I+ G D + ++L++MYAK + D+ +F + D +SWN++IAGCV +
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L+ QM +QLH +++ + ++F++
Sbjct: 338 EHHEQALELLGQM---------------------------KRQLHSSLMKMDMESDLFVS 370
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KC + AR F+ + D+++W A+I G + + +A+SLF +M K+G+
Sbjct: 371 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 430
Query: 241 PNSVAFVAVLTACSHAGL 258
N +L S AGL
Sbjct: 431 FNQTTLSTILK--STAGL 446
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 330/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL + EE L + +M + PD F L SVL A ++ G
Sbjct: 144 MPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAG 203
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HGY + G + N+ + SSL +MY KC + + RL +P ++ ++WN++IAG QN
Sbjct: 204 RQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQN 263
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + M +A +P ++F S++ +C+ L TL G+Q+H +I+ G + +
Sbjct: 264 GYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI 323
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+ MY++CG + + +F + + D+V W+++I HG +AI LF QME++ ++
Sbjct: 324 SSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLE 383
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V F+++L ACSH GL +K +F+ M + YG+ P EHY + DLLGR G ++EA
Sbjct: 384 ANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEA 443
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M W TLLSAC++HK E+A +++E++F +DP + YV+LSN +A+ +R
Sbjct: 444 LIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKR 503
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +R MR++ +KK P SW+EVKN+ + F GDKSHP I L+EL M++
Sbjct: 504 WDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKK 563
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD VLHD++ E K+ L +HSE+LAI F ++ TP GT IR+IKNLRVC DCH A
Sbjct: 564 RGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVA 623
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+IS+I REIIVRD+SRFHHF++G+CSCGDYW
Sbjct: 624 IKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 31/234 (13%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS---------- 109
GK++H I G ++ I + L+N+Y+KC +++ + LF ++P K+ +S
Sbjct: 71 GKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFR 130
Query: 110 ---------------------WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
WN+++AG +Q +EGL F +M P + S+
Sbjct: 131 SGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSV 190
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ CA L L G+Q+HG + + GF+ N+ + SSL MY KCG++ + M ++
Sbjct: 191 LRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNV 250
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
V+W +I G A +G + + + M+ G +P+ + FV+V+++CS + +
Sbjct: 251 VAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR---------- 194
FS ++ +C +L LGKQLH II +G + FI++ LL++Y+KCG +
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 195 ---------------------LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
AR +FD+M ++ +W A++ G + + LF +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
M + G P+ A +VL C AGL A + + G + +++A + +
Sbjct: 175 MNELGFLPDEFALGSVLRGC--AGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC 232
Query: 293 GKLQEAYEFISNMHAGPTENV--WLTLLSA 320
G L E I M P++NV W TL++
Sbjct: 233 GSLGEGERLIRAM---PSQNVVAWNTLIAG 259
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/514 (45%), Positives = 335/514 (65%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL++WN +I G ++ EAL++ +M + + TLS++L A V
Sbjct: 420 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 479
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG +++ G +++ + +SLI+ Y KC+ VED+ R+F + D +S+ S+I Q
Sbjct: 480 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 539
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E LK F +M ++KP SS++ ACA+L+ GKQLH I++ GF ++F
Sbjct: 540 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 599
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MYAKCG+I A F ++ IVSW+A+I G A HG+ A+ LF QM K+GV
Sbjct: 600 NSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVS 659
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V+VL AC+HAGL+ +A YF SM + +G P EHYA + DLLGRAGK+ EA E
Sbjct: 660 PNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 719
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M +VW LL A R+HK+VEL + AE +F+++P G +V+L+N YA+A +
Sbjct: 720 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGK 779
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A +R MR+ +KK P SWIEVK+K Y F+ GD+SH I L EL + M++
Sbjct: 780 WENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDK 839
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP + LHDVE+ +K+ LLY+HSE+LA+ FG+I TP G IR+ KNLRVC DCHTA
Sbjct: 840 AGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTA 899
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+I KIV REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 900 FKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 156/267 (58%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSW+ +I G A+NGL AL +M + +K + FT SSVL + D+ GK++H
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G + G + +V + ++L+ MYAKC DS RLF +P ++ +SWN++ + VQ
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCG 240
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + F +M+++ IKP S SS++ AC L GK +HG +I+ G+D + F A++L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAK G++ A +F+K+ DIVSW AVI G LH + A+ L QM++ G+ PN
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIF 360
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ L AC+ GL + +S+ K
Sbjct: 361 TLSSALKACAGMGLKELGRQLHSSLMK 387
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 165/301 (54%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN VI G + +E+AL ++ QM + P+ FTLSS L A G+++H
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ +++++ + L++MY+KC +ED+ F LLP KD I+WN+II+G Q
Sbjct: 383 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 442
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F +M I + S+I+ + A L +H+ +Q+HG +++GF ++++ +SL+
Sbjct: 443 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 502
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y KC ++ A IF++ + D+VS+T++I A +G +A+ LF +M+ +KP+
Sbjct: 503 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 562
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++L AC++ ++ + K YG ++ ++ + G + +A S
Sbjct: 563 VCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 621
Query: 305 M 305
+
Sbjct: 622 L 622
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 144/258 (55%), Gaps = 2/258 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSWN + + EA+ + +M +KP+ F+LSS++ D +G
Sbjct: 218 IPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHGY I+ G D + ++L++MYAK + D+ +F + D +SWN++IAGCV +
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L+ QM + I P + SS + ACA + LG+QLH +++ + ++F++
Sbjct: 338 EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVS 397
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KC + AR F+ + D+++W A+I G + + +A+SLF +M K+G+
Sbjct: 398 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 457
Query: 241 PNSVAFVAVLTACSHAGL 258
N +L S AGL
Sbjct: 458 FNQTTLSTILK--STAGL 473
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 10/299 (3%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
N P S + S +L + G +IH + + GL + I + LIN+Y+KC +
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYA 110
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+L D +SW+++I+G QNGL L F +M + +K +FSS++ AC+ +
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L +GKQ+HG ++ +GF+ ++F+A++L+ MYAKC ++ +FD++ ++VSW A+
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+A+ LF +M G+KPN + +++ AC+ GL D S + Y I
Sbjct: 231 SCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRD---SSRGKIIHGYLI 285
Query: 276 APSFE----HYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
++ A+ D+ + G L +A + P W +++ C +H++ E A
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQA 343
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 326/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G G Y+EAL + ++M N++PD T+ +V+ A + G
Sbjct: 155 IPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELG 214
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI+ Y+KC +E + LF L KD ISWN +I G
Sbjct: 215 RQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHL 274
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+ ACAHL + +G+ +H I + G +
Sbjct: 275 NLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASS 334
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMY+KCG+I A +F+ M + +W A+I G A+HG A+ A +F +M K+
Sbjct: 335 LRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNE 394
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP+ + FV +L+ACSHAG++D F SMT +Y I P EHY + DLLG +G +EA
Sbjct: 395 IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEA 454
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E IS M P +W +LL AC++H NVEL K A+ +F I+PNN G+YV+LSN YA A
Sbjct: 455 EEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A +R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 515 GRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 574
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T T + I+KNLRVC +CH
Sbjct: 575 QEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCH 634
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 635 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 177/334 (52%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+S+T +L A +G +IH
Sbjct: 27 NLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIH 86
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHR--------------------------- 97
G+ ++ G + ++ + +SLI+MY + R+ED+H+
Sbjct: 87 GHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIE 146
Query: 98 ----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F +PVKD +SWN++I+G V+ G + E L+ F++M+ ++P + +++ A A
Sbjct: 147 SARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASA 206
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D Y+KCG + A +F + D++SW
Sbjct: 207 RSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWN- 265
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTK 271
+++G H N + +A+ LF++M + G PN V +++L AC+H G ID W + +
Sbjct: 266 ILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKR 325
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+ + ++ D+ + G ++ A++ ++M
Sbjct: 326 LKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM 359
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/544 (42%), Positives = 334/544 (61%), Gaps = 35/544 (6%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+WN +I G +G + EAL + R+M + ++ D FT +SVL A+ + GK++H
Sbjct: 256 VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHA 315
Query: 66 YAIRH----GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV--- 118
Y +R LD ++ + ++L +Y KC +V+++ ++F +PVKD +SWN+I++G V
Sbjct: 316 YILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAG 375
Query: 119 ----------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
QNG +E LK F +M +P +F+ +
Sbjct: 376 RIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAII 435
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACA L L G+QLH ++R GFD ++ ++L+ MYAKCG + A C+F M D VS
Sbjct: 436 ACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS 495
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W A+I HG+ A+ LFE M K+ + P+ + F+ VL+ CSHAGL+++ YF SM+
Sbjct: 496 WNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMS 555
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
YGI P +HYA + DLL RAGK EA + I M P +W LL+ CR+H N++L
Sbjct: 556 GLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLG 615
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
+ AE++F + P + G YV+LSN YA RW D A +R MR+KG+KK P CSWIEV+NK
Sbjct: 616 IQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENK 675
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ F+ D HP + L+EL +M + GY+PDTK VLHD+E EQK+ +L HSE+L
Sbjct: 676 VHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKL 735
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
A+ FG++ P G T+R+ KNLR+CGDCH A KF+SK+V+REI+VRD RFHHF++G+CSC
Sbjct: 736 AVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSC 795
Query: 511 GDYW 514
G+YW
Sbjct: 796 GNYW 799
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 13/249 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L++W +I GLA+NG EE+L + +M + +P + + + A ++ G
Sbjct: 387 MPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHG 446
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +R G D+++ G++LI MYAKC VE +H LF +P D++SWN++IA Q+
Sbjct: 447 RQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQH 506
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG----KQLHGCIIRNGFDDN 176
G + L+ F ML I P ++F +++ C+H + G K + G +D+
Sbjct: 507 GHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDH 566
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAIS----LF 231
+ ++D+ + G A+ + + M + W A++ G +HGN I LF
Sbjct: 567 Y---ARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLF 623
Query: 232 EQM-EKDGV 239
E M + DG
Sbjct: 624 ELMPQHDGT 632
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 175/376 (46%), Gaps = 60/376 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIK 59
+ + D V +N +I G + N A+ + R + +PD+FT +SVL A V D +
Sbjct: 109 LGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQ 168
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCAR---------VEDSHRLFCLLPVKDAISW 110
++IH ++ G + ++L++++ KCA + + +LF + +D +SW
Sbjct: 169 CQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSW 228
Query: 111 -------------------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
N++I+G V +G F E L+ FR+M + I+
Sbjct: 229 TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQ 288
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN----GFDDNMFIASSLLDMYAKCGNIRL 195
+++S++ ACA+ GKQ+H I+R D ++ + ++L +Y KCG +
Sbjct: 289 WDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDE 348
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
AR +F++M + D+VSW A++ G G +A S FE+M + N + + +++ +
Sbjct: 349 ARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPER----NLLTWTVMISGLAQ 404
Query: 256 AGLIDKAWSYFNSMTK------DYGIAPSFEHYAAVADLL-GRAGKLQEA-YEFISNMHA 307
G +++ FN M DY A + A +A L+ GR Q F S++ A
Sbjct: 405 NGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSA 464
Query: 308 GPTENVWLTLLSACRV 323
G N +T+ + C V
Sbjct: 465 G---NALITMYAKCGV 477
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 175/422 (41%), Gaps = 70/422 (16%)
Query: 22 YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSS 81
Y A + M KP + L+ ++ ++ D++ + IR ++ ++
Sbjct: 31 YSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFD-EIRQ---PDIVARTT 86
Query: 82 LINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
LI ++ + +F P ++D + +N++I G N ++ FR +L +
Sbjct: 87 LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146
Query: 140 PRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSLLDMYAKCG------- 191
P + +F+S++ A A + +Q+H ++++G + ++LL ++ KC
Sbjct: 147 PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSS 206
Query: 192 --NIRLARCIFDKMDLHDIVSWTAVIMG-------------------------NAL---- 220
+ AR +FD+M D +SWT +I G NA+
Sbjct: 207 SSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGY 266
Query: 221 --HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI---DKAWSYFNSMTKDYGI 275
HG +A+ +F +M G++ + + +VL+AC++AG + +Y +
Sbjct: 267 VHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSL 326
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKV 333
S A+A L + GK+ EA + + M P +++ W +LS ++ A
Sbjct: 327 DFSLSVNNALATLYWKCGKVDEARQVFNQM---PVKDLVSWNAILSGYVNAGRIDEAKSF 383
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTP----------ACS 383
E+ M + N + V++S A+ SL++F R K P AC+
Sbjct: 384 FEE--MPERNLLTWTVMISGL---AQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACA 438
Query: 384 WI 385
W+
Sbjct: 439 WL 440
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 34/141 (24%)
Query: 146 SSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK--------------- 189
+ + C H + + + +H +I +GF +I + L+D+Y K
Sbjct: 18 AQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIR 77
Query: 190 ----------------CGNIRLARCIF--DKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
GN LAR IF + + D V + A+I G + + + AI LF
Sbjct: 78 QPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELF 137
Query: 232 EQMEKDGVKPNSVAFVAVLTA 252
+ ++G +P++ F +VL A
Sbjct: 138 RDLLRNGFRPDNFTFTSVLGA 158
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/524 (43%), Positives = 336/524 (64%), Gaps = 11/524 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---------GNVNLKPDSFTLSSVLPIF 51
+P+ ++VSW ++I G +N + AL + + GN N+ DS + SVL
Sbjct: 1203 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGN-NVPLDSVVMVSVLSAC 1261
Query: 52 ADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN 111
+ + +HG+ ++ G D ++ +G++L++ YAKC + S ++F + KD ISWN
Sbjct: 1262 SRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWN 1321
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
S+IA Q+GL E L+ F M+ ++ V+ S+++ ACAH L GK +H +I+
Sbjct: 1322 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 1381
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
+ N+ + +S++DMY KCG + +A+ FD+M ++ SWTA++ G +HG A +A+ +
Sbjct: 1382 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 1441
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M + GVKPN + FV+VL ACSHAGL+++ W +FN+M Y I P EHY + DL G
Sbjct: 1442 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 1501
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
RAG L EAY I M P VW +LL ACR+HKNV+L A+K+F +DP+N G YV+
Sbjct: 1502 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVL 1561
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YA A RW D +R+ M+N+ + K P S +E+K + + F+ GDK HP + I +
Sbjct: 1562 LSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKY 1621
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L++L +++ GYVP+ VLHDV+EE+K+ +L HSE+LA+ FG++ + GTTI IIKN
Sbjct: 1622 LEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKN 1681
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LRVCGDCHT IK ISK+V R+ +VRD+ RFHHF+DG CSCGDYW
Sbjct: 1682 LRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 172/324 (53%), Gaps = 31/324 (9%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+WN +I NGL E+AL + + M + D FT V+ +++ + GK +HG
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG------ 121
I++G +V + ++LI+ Y KC + ++F + V++ +SW ++I+G + G
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 122 -LFD------------------------EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
+FD E L+ F++M I P + S++ AC +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L LG+ +H I+N + +++ ++L+DMY+KCG+I+ A +F+ M + +W ++I
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
+HG +A++LF +ME+ VKP+++ F+ VL AC H + + +YF MT+ YGIA
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 277 PSFEHYAAVADLLGRAGKLQEAYE 300
P EHY + +L R+ L EA++
Sbjct: 392 PIPEHYECMTELYARSNNLDEAFK 415
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 187/368 (50%), Gaps = 23/368 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S++ SWN+VI LAR G EAL + + L P + + + D++ G+
Sbjct: 1105 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 1164
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G + ++ + S+LI+MY+KC +++D+ LF +P+++ +SW S+I G VQN
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 124 DEGLKFFRQMLIAKIKPR--------HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
D L F+ L + + V S++ AC+ ++ + + +HG +++ GFD
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 1284
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ + ++L+D YAKCG +++ +FD M+ D +SW ++I A G + +A+ +F M
Sbjct: 1285 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 236 KD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK---DYGIAPSFEHYAAVADLLGR 291
+ GV+ N+V AVL AC+HAG + + + K +Y + ++ D+ +
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG----TSIIDMYCK 1400
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYV 349
G+++ A + M ++ W +++ +H + A + K+ + PN Y+
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVKS-WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN----YI 1455
Query: 350 ILSNTYAA 357
+ AA
Sbjct: 1456 TFVSVLAA 1463
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 45/301 (14%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH IR GL + + LI++Y+ R+ + LF + +WN II N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++ L ++ M+ I +F ++ AC + ++ LGK +HG +I+ GF ++F+
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN----------------- 223
++L+D Y KCG+ R A +F+KM + ++VSWT VI G G+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 224 --------------AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+A+ LF++M+ + + PN V+++ AC+ G++
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILT-----LGRG 278
Query: 270 TKDYGIAPSFE----HYAAVADLLGRAGKLQEAYEFISNM--HAGPTENVWLTLLSACRV 323
DY I E A+ D+ + G +++A E M + PT W +++++ V
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT---WNSMITSLGV 335
Query: 324 H 324
H
Sbjct: 336 H 336
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 93/161 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW +I G RN EEAL + ++M N+ P+ +T+ S++ + + G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH YAI++ ++ V +G++LI+MY+KC ++D+ +F +P K +WNS+I +
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
GL E L F +M +KP ++F ++ AC H+ + G
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+Q+H IIR+G ++ + L+ +Y+ G I A +F ++ +W +I N ++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + A+ L++ M G+ + F V+ AC++ ID S+ K YG +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFV 162
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM 339
+ D + G + A + M NV W T++S +++ A ++ ++
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMR---VRNVVSWTTVISGLISCGDLQEARRIFDE--- 216
Query: 340 IDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
I N+ ++ + N Y R + +L +F R
Sbjct: 217 IPSKNVVSWTAMINGY--IRNQQPEEALELFKR 247
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/516 (44%), Positives = 328/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + +M +N++PD T +VL A + G
Sbjct: 156 IPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELG 215
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG D+N+ I ++LI++Y+KC VE + LF L KD ISWN++I G
Sbjct: 216 RQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHM 275
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ S++PACAHL + +G+ +H I + G +
Sbjct: 276 NLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 335
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ M + SW A+I G A+HG A + LF +M K G
Sbjct: 336 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 395
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SMT+DY + P EHY + DLLG +G +EA
Sbjct: 396 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 455
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC++H NVELA A+ + I+P N +Y++LSN YA+A
Sbjct: 456 EEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASA 515
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D A +R + K MKK P CS IEV + + FV GDK HP I L+E+ +
Sbjct: 516 GRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLL 575
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 576 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 635
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K +SKI +REI+ RD +RFHHF DG CSC DYW
Sbjct: 636 EATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 177/330 (53%), Gaps = 34/330 (10%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I G A + +L + M ++ L P+S+T +L A +G++IHG +
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVL 91
Query: 69 RHGLDANVCIGSSLINMYAKCARVED--------SHR----------------------- 97
+ G D ++ + +SLI+MY + R+ED SHR
Sbjct: 92 KLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQK 151
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +PVKD +SWN++I+G + G + E L+ F +M+ ++P ++ +++ ACAH +
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
+ LG+Q+H + +GFD N+ I ++L+D+Y+KCG + A +F + D++SW +I G
Sbjct: 212 IELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLI-G 270
Query: 218 NALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGI 275
H N + +A+ LF++M + G PN V ++VL AC+H G ID W + + G+
Sbjct: 271 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 330
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ ++ D+ + G ++ A++ ++M
Sbjct: 331 TNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 323/513 (62%), Gaps = 3/513 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN +I G N YEEAL + ++M N++PD TL SVL A + G+EIH
Sbjct: 179 DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH 238
Query: 65 GYAI-RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG +++ I ++ I +Y+KC VE + LF L KD +SWN++I G L+
Sbjct: 239 TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLY 298
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMFIAS 181
E L F++ML + P V+ S++PACAHL + +G+ +H I + G + + +
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRT 358
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+DMYAKCG+I A +F+ M + SW A+I G A+HG A+ A LF +M K+G++P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + V +L+ACSH+GL+D F S+T+DY I P EHY + DLLG AG +EA E
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I M P +W +LL AC++H N+ELA A+K+ I+P N G+YV+LSN YA A RW
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRW 538
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+D A +R + KGMKK P CS IE+ + + F+ GDK HP I L+E+ +E+
Sbjct: 539 EDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEA 598
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + ++KNLRVC +CH A
Sbjct: 599 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEAT 658
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKI +REI+ RD +RFHHF DG CSC DYW
Sbjct: 659 KLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 174/335 (51%), Gaps = 35/335 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT++ GLA + L + +M + P+++T +L A +G++IH
Sbjct: 47 NLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIH 106
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF----------CL------------- 101
++ G + + +SLI+MYA+ R+ED+ ++F C
Sbjct: 107 AQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVR 166
Query: 102 --------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ +D +SWN++I G V+N ++E L+ F++M+ ++P + S++ ACA
Sbjct: 167 SARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACA 226
Query: 154 HLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
++ LG+++H + +GF ++ I ++ + +Y+KCG++ +A +F+ + D+VSW
Sbjct: 227 QSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWN 286
Query: 213 AVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMT 270
+I G H N + +A+ LF++M + G PN V ++VL AC+H G ID W +
Sbjct: 287 TLI-GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 345
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ G+ ++ D+ + G ++ A++ ++M
Sbjct: 346 RLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM 380
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/516 (43%), Positives = 326/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + ++M N++PD T+ +V+ A + G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELG 285
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I +SL+++Y+KC +E + LF L KD ISWN++I G
Sbjct: 286 RQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHM 345
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + +P V+ SI+PACAHL + +G+ +H I + +
Sbjct: 346 NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS 405
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ + + SW A+I G A+HG A A +F +M K G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIG 465
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACS +G++D F +MT+DY I P EHY + DLLG +G +EA
Sbjct: 466 IEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEA 525
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+NM P +W +LL AC++ NVEL A+ + I+P N G YV+LSN YA A
Sbjct: 526 EEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATA 585
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A +R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 586 GRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 646 EKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 705
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 706 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 197/385 (51%), Gaps = 41/385 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+S+T +L A +G++IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIH 157
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVED------------------------------ 94
G+ ++ G D ++ + +SLI++Y + R+ED
Sbjct: 158 GHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIE 217
Query: 95 -SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ +LF +PVKD +SWN++I+G + G + E L+ F++M+ I+P + +++ ACA
Sbjct: 218 SAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACA 277
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I +SL+D+Y+KCG + A +F+ + D++SW
Sbjct: 278 QSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNT 337
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-W--SYFNSMT 270
+I G +A+ LF++M + G +PN V +++L AC+H G ID W Y +
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYE-FISNMHAGPTENVWLTLLSACRVHKNVEL 329
K A S ++ D+ + G ++ A++ F S +H + W ++ +H +
Sbjct: 398 KSATNASSLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSS--WNAMIFGFAMHGRADA 453
Query: 330 AGKVAEKI--FMIDPNNMGAYVILS 352
A + ++ I+P+++ +LS
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLS 478
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 98/226 (43%), Gaps = 15/226 (6%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM---YAKCGNIRLARCIFDKM 203
S++ C L +L L +H +I+ G + + S LL++ + A +F+ +
Sbjct: 38 SLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI 94
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+++ W + G+AL + A+ L+ M G+ PNS F +L +C+ + +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+ K F H + ++ + + G+L++A + P +V + L+
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLIS-VYVQNGRLEDARKVFDR---SPHRDVVSYTALIKGY 210
Query: 322 RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+E A K+ ++I + D + A + + YA +K+A L
Sbjct: 211 ASRGYIESAQKLFDEIPVKDVVSWNAMI---SGYAETGNYKEALEL 253
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/524 (43%), Positives = 336/524 (64%), Gaps = 11/524 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---------GNVNLKPDSFTLSSVLPIF 51
+P+ ++VSW ++I G +N + AL + + GN N+ DS + SVL
Sbjct: 2076 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGN-NVPLDSVVMVSVLSAC 2134
Query: 52 ADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN 111
+ + +HG+ ++ G D ++ +G++L++ YAKC + S ++F + KD ISWN
Sbjct: 2135 SRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWN 2194
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
S+IA Q+GL E L+ F M+ ++ V+ S+++ ACAH L GK +H +I+
Sbjct: 2195 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 2254
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
+ N+ + +S++DMY KCG + +A+ FD+M ++ SWTA++ G +HG A +A+ +
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 2314
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M + GVKPN + FV+VL ACSHAGL+++ W +FN+M Y I P EHY + DL G
Sbjct: 2315 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 2374
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
RAG L EAY I M P VW +LL ACR+HKNV+L A+K+F +DP+N G YV+
Sbjct: 2375 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVL 2434
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YA A RW D +R+ M+N+ + K P S +E+K + + F+ GDK HP + I +
Sbjct: 2435 LSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKY 2494
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L++L +++ GYVP+ VLHDV+EE+K+ +L HSE+LA+ FG++ + GTTI IIKN
Sbjct: 2495 LEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKN 2554
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LRVCGDCHT IK ISK+V R+ +VRD+ RFHHF+DG CSCGDYW
Sbjct: 2555 LRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 172/324 (53%), Gaps = 31/324 (9%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+WN +I NGL E+AL + + M + D FT V+ +++ + GK +HG
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG------ 121
I++G +V + ++LI+ Y KC + ++F + V++ +SW ++I+G + G
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 122 -LFD------------------------EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
+FD E L+ F++M I P + S++ AC +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L LG+ +H I+N + +++ ++L+DMY+KCG+I+ A +F+ M + +W ++I
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
+HG +A++LF +ME+ VKP+++ F+ VL AC H + + +YF MT+ YGIA
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 277 PSFEHYAAVADLLGRAGKLQEAYE 300
P EHY + +L R+ L EA++
Sbjct: 392 PIPEHYECMTELYARSNNLDEAFK 415
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 187/368 (50%), Gaps = 23/368 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S++ SWN+VI LAR G EAL + + L P + + + D++ G+
Sbjct: 1978 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 2037
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G + ++ + S+LI+MY+KC +++D+ LF +P+++ +SW S+I G VQN
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 124 DEGLKFFRQMLIAKIKPR--------HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
D L F+ L + + V S++ AC+ ++ + + +HG +++ GFD
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 2157
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ + ++L+D YAKCG +++ +FD M+ D +SW ++I A G + +A+ +F M
Sbjct: 2158 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217
Query: 236 KD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK---DYGIAPSFEHYAAVADLLGR 291
+ GV+ N+V AVL AC+HAG + + + K +Y + ++ D+ +
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG----TSIIDMYCK 2273
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYV 349
G+++ A + M ++ W +++ +H + A + K+ + PN Y+
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKS-WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN----YI 2328
Query: 350 ILSNTYAA 357
+ AA
Sbjct: 2329 TFVSVLAA 2336
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 45/301 (14%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH IR GL + + LI++Y+ R+ + LF + +WN II N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++ L ++ M+ I +F ++ AC + ++ LGK +HG +I+ GF ++F+
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN----------------- 223
++L+D Y KCG+ R A +F+KM + ++VSWT VI G G+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 224 --------------AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+A+ LF++M+ + + PN V+++ AC+ G++
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILT-----LGRG 278
Query: 270 TKDYGIAPSFE----HYAAVADLLGRAGKLQEAYEFISNM--HAGPTENVWLTLLSACRV 323
DY I E A+ D+ + G +++A E M + PT W +++++ V
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT---WNSMITSLGV 335
Query: 324 H 324
H
Sbjct: 336 H 336
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 93/161 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW +I G RN EEAL + ++M N+ P+ +T+ S++ + + G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH YAI++ ++ V +G++LI+MY+KC ++D+ +F +P K +WNS+I +
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
GL E L F +M +KP ++F ++ AC H+ + G
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+Q+H IIR+G ++ + L+ +Y+ G I A +F ++ +W +I N ++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + A+ L++ M G+ + F V+ AC++ ID S+ K YG +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFV 162
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM 339
+ D + G + A + M NV W T++S +++ A ++ ++
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMR---VRNVVSWTTVISGLISCGDLQEARRIFDE--- 216
Query: 340 IDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
I N+ ++ + N Y R + +L +F R
Sbjct: 217 IPSKNVVSWTAMINGY--IRNQQPEEALELFKR 247
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/531 (40%), Positives = 337/531 (63%), Gaps = 26/531 (4%)
Query: 9 WNTVIVGLARNG-LYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHG 65
WN +I G A++G + EEA+ + +M P T++ VLP A +V GKE +HG
Sbjct: 332 WNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACA-RSEVFTGKEAVHG 390
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
Y ++ + +N + ++L++MYA+ R++++H +F ++ ++D +SWN++I GC+ GL E
Sbjct: 391 YVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISE 450
Query: 126 GLKFFRQMLIA--------------------KIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+ R+M + + P +++ +++P CA L GK++H
Sbjct: 451 AFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIH 510
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
G +R+ + ++ + S+L+DMYAKCG + LAR +FD++ ++++W +IM +HG
Sbjct: 511 GYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGD 570
Query: 226 DAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
+A++LF++M +G PN V F+A L ACSH+GL+D+ F M +DYG P+ +A
Sbjct: 571 EALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHAC 630
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
V D+LGRAG+L EAY IS+M G + + W T+L ACR+H+NV+L AE++F ++P+
Sbjct: 631 VVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPD 690
Query: 344 NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPF 403
YV+L N Y+AA W+++ +R MR +G+ K P CSWIE+ + F+AG+ +HP
Sbjct: 691 EASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPE 750
Query: 404 YHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGT 463
+++ + L ERM +EGYVPDT VLHDV+E +K +L YHSE+LAI FG++ P G
Sbjct: 751 SAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGA 810
Query: 464 TIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TIR+ KNLRVC DCH A KFIS++V REI++RD RFHHF DG CSCGDYW
Sbjct: 811 TIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 143/277 (51%), Gaps = 25/277 (9%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V DLV+WNT+I L + G EEA+ ++ M + ++PD T +S LP + + G+E
Sbjct: 222 VGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGRE 281
Query: 63 IHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQ 119
+H + ++ L AN + S+L++MYA +V + R+F ++P + WN++I G Q
Sbjct: 282 VHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQ 341
Query: 120 NGLFD-EGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G D E ++ F +M A P + + ++PACA + +HG +++ N
Sbjct: 342 HGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNR 401
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-- 235
F+ ++L+DMYA+ G + A IF +DL DIVSW +I G + G +A L +M+
Sbjct: 402 FVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLP 461
Query: 236 ----------------KDGVK--PNSVAFVAVLTACS 254
DG + PN++ + +L C+
Sbjct: 462 SSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCA 498
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 182/349 (52%), Gaps = 19/349 (5%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK--G 60
+ D VS+N++I L + AL+ +R M + + SFTL SVL + D G
Sbjct: 115 LRDAVSYNSLISALCLFRRWGHALDALRDM-LADHEVSSFTLVSVLLACSHLADQGHRLG 173
Query: 61 KEIHGYAIRHG-LDANV--CIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIA 115
+E H +A++HG LD ++L++MYA+ V+D+ RLF V D ++WN++I+
Sbjct: 174 REAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMIS 233
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
VQ G +E ++ M+ ++P V+F+S +PAC+ L L +G+++H ++++ DD
Sbjct: 234 LLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKD--DD 291
Query: 176 ---NMFIASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNA-HDAIS 229
N F+AS+L+DMYA + AR +FD + H + W A+I G A HG +AI
Sbjct: 292 LAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIE 351
Query: 230 LFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
LF +ME + G P+ VL AC+ + + + + K + F A+ D+
Sbjct: 352 LFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQN-ALMDM 410
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
R G++ EA+ + + + W TL++ C V + A ++ ++
Sbjct: 411 YARLGRMDEAHTIFAMIDLRDIVS-WNTLITGCIVQGLISEAFQLVREM 458
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 50/331 (15%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHR 97
D F L + A D + IHG ++R L + ++L+ YA+C ++ +
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 98 LFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
LF P ++DA+S+NS+I+ + L R ML A + + S++ AC+HL
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHL 165
Query: 156 TTL--HLGKQLHGCIIRNGFDD---NMFIASSLLDMYAKCGNIRLARCIF--DKMDLHDI 208
LG++ H +++GF D F ++LL MYA+ G + A+ +F + D+
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI--------- 259
V+W +I G +A+ + M GV+P+ V F + L ACS L+
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285
Query: 260 -----DKAWSYF--NSMTKDYGIAPSFEHYAAVADLLGRAGKL----------------- 295
D A + F +++ Y H V D++ G+
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345
Query: 296 -QEAYEFISNMHA----GPTENVWLTLLSAC 321
+EA E S M A P+E +L AC
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPAC 376
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P ++++WN +I+ +GL +EAL + R + N P+ T + L + V +
Sbjct: 548 LPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDR 607
Query: 60 GKEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAIS-WNSIIAG 116
G E+ G +G + + + ++++ + R+++++ + + P + +S W++++
Sbjct: 608 GLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGA 667
Query: 117 C 117
C
Sbjct: 668 C 668
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VS+ ++I G AR GL EA+ + +M + PD +T+++VL A Y + +G
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + L ++ + ++L++MYAKC ++++ +F + VKD ISWN+II G +N
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E L F +L K P + + ++PACA L+ G+++HG I+RNG+ + +
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+DMYAKCG + LA +FD + D+VSWT +I G +HG +AI+LF QM + G+
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + ++FV++L ACSH+GL+D+ W +FN M + I P+ EHYA + D+L R G L +AY
Sbjct: 597 EADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAY 656
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI NM P +W LL CR+H +V+LA KVAEK+F ++P N G YV+++N YA A
Sbjct: 657 RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAE 716
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+ LR + +G++K P CSWIE+K + FVAGD S+P I L+++ RM
Sbjct: 717 KWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMI 776
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L D EE +K+ L HSE+LA+ GII + G IR+ KNLRVCGDCH
Sbjct: 777 EEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHE 836
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ +REI++RD++RFH F+DG CSC +W
Sbjct: 837 MAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 11/303 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ LA++G + ++ + ++M + ++ DS+T S V F+ V G+++HG+ +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +G+SL+ Y K RV+ + ++F + +D ISWNSII G V NGL ++GL
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QML++ I+ + S+ CA + LG+ +H ++ F ++LLDMY+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG++ A+ +F +M +VS+T++I G A G A +A+ LFE+ME++G+ P+ A
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 249 VLTACSHAGLIDKA-----WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
VL C+ L+D+ W N + D ++ A+ D+ + G +QEA S
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN------ALMDMYAKCGSMQEAELVFS 456
Query: 304 NMH 306
M
Sbjct: 457 EMR 459
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWN++I G NGL E+ L++ QM ++ D T+ SV AD + G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H ++ ++L++MY+KC ++ + +F + + +S+ S+IAG +
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E +K F +M I P + ++++ CA L GK++H I N ++F++
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE-QMEKDGV 239
++L+DMYAKCG+++ A +F +M + DI+SW +I G + + A++A+SLF +E+
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 240 KPNSVAFVAVLTACSHAGLIDKA 262
P+ VL AC+ DK
Sbjct: 496 SPDERTVACVLPACASLSAFDKG 518
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 135/250 (54%), Gaps = 2/250 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT + +G E A+ ++ G ++ P TL SVL + AD + GKE+ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G + +GS L MY C ++++ R+F + ++ A+ WN ++ ++G F +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M+ + ++ +FS + + + L ++H G+QLHG I+++GF + + +SL+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
+ AR +FD+M D++SW ++I G +G A +S+F QM G++ + V+V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 250 LTACSHAGLI 259
C+ + LI
Sbjct: 303 FAGCADSRLI 312
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/510 (45%), Positives = 326/510 (63%), Gaps = 2/510 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+VSWN +I G A G Y+EAL + +M +++KPD T+++VL +V G
Sbjct: 170 IPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELG 229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + HG +N+ + ++LI++Y+KC +E +H LF L KD ISWN++I G
Sbjct: 230 RQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYI 289
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMF 178
E L F++ML P V+ SI+PACAHL + +G+ +H I + G N
Sbjct: 290 NHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTS 349
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCGNI A +FD + + S A+I G A+HG A A L +M+KDG
Sbjct: 350 LQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDG 409
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSHAGL D F SMT DY I P EHY + DLLGR+G +EA
Sbjct: 410 IEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEA 469
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I++M P +W +LL AC++HKN+EL +A+K+ I+P N G+YV+LSN YA +
Sbjct: 470 EELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATS 529
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D A +R + +KG+KK P CS IE+ + + F+ GDK HP I + L+E+ +
Sbjct: 530 ARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLL 589
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ G+V DT EVL ++EEE K+ L YHSE+LAI FG+I T GT +RI+KNLRVC +CH
Sbjct: 590 AETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCH 649
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
A K ISKI +REII RD SRFHHF+DG C
Sbjct: 650 EATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 170/324 (52%), Gaps = 32/324 (9%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+SWNT+I G A + ALN+ M ++ L P+S+T + A +GK+IH
Sbjct: 44 LSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQ 103
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL------------------------- 101
+++GL ++ + +SLI+MYA+ VED+H++F
Sbjct: 104 ILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKA 163
Query: 102 ------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+P+KD +SWN++I+G + G + E L+ F +M+ +KP + ++++ C H
Sbjct: 164 QKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHS 223
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ LG+Q+H I +GF N+ + ++L+D+Y+KCG + A +F+ + D++SW +I
Sbjct: 224 GNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLI 283
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYG 274
G A + +A+ +F++M K G PN V +++L AC+H G ID W + K G
Sbjct: 284 GGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG 343
Query: 275 IAPSFEHYAAVADLLGRAGKLQEA 298
I + ++ D+ + G ++ A
Sbjct: 344 IITNTSLQTSLIDMYAKCGNIEAA 367
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 169 IRNGFDDNMFIASSLLD---MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
I+ G + + S LLD + + A +F + + +SW +I G+AL +
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A++L+ M G+ PNS F + +C+ + + + K YG+ + ++
Sbjct: 61 SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILK-YGLTVDLHVHTSL 119
Query: 286 ADLLGRAGKLQEAYE-FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNN 344
+ + G +++A++ F ++ H + +++ N++ A K+ ++I + D +
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVS--YTAMITGYASRGNMDKAQKMFDEIPIKDVVS 177
Query: 345 MGAYVILSNTYAAARRWKDAASL 367
A + + YA R+K+A L
Sbjct: 178 WNAMI---SGYAEIGRYKEALEL 197
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 332/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I+G R G E+AL+ ++M + ++K D +TL SVL FA +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H I+ G +A + ++LI+MYAK +++ + +F + KD +SW S++ G N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E +K F +M I+ + P ++ +S++ ACA LT + G+Q+H ++++G + ++ +
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MYAKCG+I A FD M D++SWTA+I+G A +G ++ ++QM G K
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH GL+ +YF +M K YGI P EHYA + DLLGR+GKL EA
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P VW LL+ACRVHK +EL A+ +F ++P N YV+LSN Y+AA +
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA +R MR++G+ K P SWIE +K F++ D++HP + I + E++ +++
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD LHD ++E K+ L YHSE+LA+ FG++ P G IRI KNLRVCGDCHTA
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K+ SK+ R II+RD++ FHHF +G+CSCGDYW
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/509 (42%), Positives = 335/509 (65%), Gaps = 1/509 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
V W+ +I G + +AL + M + L P TL+++L A D+ +GK++H
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ I+ G+D + +G+SLI+MYAKC ++++ + KD +S+++II+GCVQNG ++
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L FRQM + I P + +++PAC+HL L G HG + GF ++ I ++++D
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIID 456
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY+KCG I ++R IFD+M DI+SW +I+G +HG +A+SLF++++ G+KP+ V
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVT 516
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+AVL+ACSH+GL+ + +F+SM++++ I P HY + DLL RAG L EAY FI M
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM 576
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +W LL+ACR HKN+E+ +V++KI ++ P G +V++SN Y++ RW DAA
Sbjct: 577 PFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAA 636
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R R+ G KK+P CSW+E+ + F+ G +SHP IN+ L+ELL +M++ GY
Sbjct: 637 YIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRA 696
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
D+ VLHDVEEE+K+ +L YHSE++AI FGI+ T + I + KNLR+C DCH+AIKFI+
Sbjct: 697 DSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFIT 756
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ +REI VRD SRFHHF+DG C+C D+W
Sbjct: 757 LLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 161/324 (49%), Gaps = 5/324 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +V WN +I A +G +++++ + M + + P +FT +L + + G
Sbjct: 67 IPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCV 118
+ IH +A GL ++ + ++L++MYAKC + + LF + +D ++WN++IA
Sbjct: 127 RLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFS 186
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ L + + QM A + P + SI+P LH GK +H IRN F DN+
Sbjct: 187 FHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVV 246
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KD 237
+ ++LLDMYAKC + AR IF+ ++ + V W+A+I G LH + DA++L++ M
Sbjct: 247 LQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIY 306
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ P +L AC+ + + M K G+ ++ + + G +
Sbjct: 307 GLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGIMDN 365
Query: 298 AYEFISNMHAGPTENVWLTLLSAC 321
A F+ M A T + + ++S C
Sbjct: 366 AVGFLDEMIAKDTVS-YSAIISGC 388
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VS++ +I G +NG E+AL I RQM + + P T+ ++LP + + G
Sbjct: 373 MIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG 432
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
HGY + G + I +++I+MY+KC ++ S +F + +D ISWN++I G +
Sbjct: 433 TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIH 492
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
GL E L F+++ +KP V+ +++ AC+H + GK + +N M
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAH 552
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-- 236
++D+ A+ GN+ A +M + ++ W A++ H N I + EQ+ K
Sbjct: 553 YICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKN----IEMGEQVSKKI 608
Query: 237 DGVKPNSVA-FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ P FV + S G D A +Y S+ + +G S
Sbjct: 609 QLLGPEGTGNFVLMSNIYSSVGRWDDA-AYIRSIQRHHGYKKS 650
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
++ + +F +P + WN +I +G F + + + ML + P + +F ++ A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH--DIV 209
C+ L L LG+ +H G +++++++LL MYAKCG++ A+ +F+ + DIV
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+W A+I + H I QM++ GV PNS V++L A + +
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQG 229
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/545 (42%), Positives = 343/545 (62%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQ-MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+VSWN++I G ++G EAL + + +LKPD F+L+S L A+ + GK+I
Sbjct: 203 DIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQI 262
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR-------------------------- 97
HGY +R DA+ +G++LI+MYAK VE + R
Sbjct: 263 HGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLG 322
Query: 98 -------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
+F L D ++W ++I G VQNGL ++ ++ F+ M+ +P + ++++
Sbjct: 323 DITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLS 382
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIV 209
A + +T+L+ GKQ+H IR+G + + ++L MYAK G+I AR +F+ + + D V
Sbjct: 383 ASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTV 442
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SWT++IM A HG +AI LFEQM G+KP+ + +V VL+AC+H GL+++ SYF+ M
Sbjct: 443 SWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLM 502
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ I P+ HYA + DL GRAG LQEAY+F+ NM P W +LLS+C+V+KNV+L
Sbjct: 503 KNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDL 562
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AE++ +I+PNN GAY L+N Y++ +W DAA +R M+ +G+KK SW++++N
Sbjct: 563 AKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQN 622
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + F D HP I + + ++ + +++ G+ PDT+ VLHD+E E K +L YHSE+
Sbjct: 623 KTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEK 682
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FGII TP+ TT+RI+KNLRVC DCH AIKFISK+V REIIVRD +RFHHF+DG CS
Sbjct: 683 LAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCS 742
Query: 510 CGDYW 514
C DYW
Sbjct: 743 CKDYW 747
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 201/420 (47%), Gaps = 70/420 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D VSW T+IVG + G +E+A+ I M + P FTL++VL A G
Sbjct: 67 IPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAK-------------------------------C 89
K++H + ++ GL A V + +SL+NMYAK C
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSI 148
RV+ + F LL +D +SWNS+IAGC Q+G +E L+FF +L +KP S +S
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL------------- 195
+ ACA+L L GKQ+HG I+R FD + + ++L+ MYAK G + +
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306
Query: 196 --------------------ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
AR IF+ + D+V+WTA+I+G +G +DAI +F+ M
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD-YGIAPSFEHYAAVADLLGRAGK 294
+G +PNS A+L+A S ++ S + ++PS + A+ + +AG
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGS 424
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ A + + + W +++ A H E A ++ E++ I P+++ +LS
Sbjct: 425 INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 155/280 (55%), Gaps = 10/280 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++++ YAK ++E +H++F L+PV+D++SW +II G Q G F++ +K F M+ K+
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P + ++++ +CA + +GK++H +++ G + +A+SLL+MYAK G++++A+ +
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGL 258
FD+M L + SW A+I + G A++ FE + E+D V NS ++ C+ G
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNS-----MIAGCNQHGF 219
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL---QEAYEFISNMHAGPTENVWL 315
++A +F+S+ KD + P A+ KL ++ + +I + V
Sbjct: 220 DNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN 279
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
L+S VE+A ++ E+ + D + + A+ L N Y
Sbjct: 280 ALISMYAKSGGVEIARRIIEQSGISDLDVI-AFTALLNGY 318
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%)
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F +++L YAK G + A +FD + + D VSWT +I+G G DAI +F M KD
Sbjct: 42 FSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD 101
Query: 238 GVKPNSVAFVAVLTACSHAG 257
V P VL +C+ G
Sbjct: 102 KVLPTQFTLTNVLASCAATG 121
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/516 (44%), Positives = 327/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN I G A G Y+EAL + ++M N++PD T+ +VL A + G
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELG 254
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG N+ I ++LI++Y+KC +E + LF L KD ISWN++I G
Sbjct: 255 RQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHM 314
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F+ ML + KP V+ SI+ ACAHL + +G+ +H I + G +
Sbjct: 315 NLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASS 374
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A+ +FD M + SW A+I G A+HG A+ A +F +M K+G
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNG 434
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SMT+DY + P EHY + DL G +G +EA
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEA 494
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ I+ M P +W +LL AC++H NVEL A+ + I+P N G+YV+LSN YA A
Sbjct: 495 EKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATA 554
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 555 ERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 614
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 615 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 674
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG+CSC DYW
Sbjct: 675 EATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 174/333 (52%), Gaps = 34/333 (10%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
L+ WNT+ G A + AL + M ++ L P+S+T +L A +G+++HG
Sbjct: 68 LLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHG 127
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVED------------------------------- 94
++ G D ++ I +SLI+MY + R+ED
Sbjct: 128 QVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIES 187
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+H++F +PVKD +SWN+ I+G + G + E L+ F++M+ ++P + +++ ACA
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
++ LG+Q+H I +GF N+ I ++L+D+Y+KCG + A +F + D++SW +
Sbjct: 248 SGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTL 307
Query: 215 IMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKD 272
I G H N + +A+ LF+ M + G KPN V +++L+AC+H G ID W + +
Sbjct: 308 I-GGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRL 366
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+ + ++ D+ + G ++ A + +M
Sbjct: 367 KGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 98/224 (43%), Gaps = 11/224 (4%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD---MYAKCGNIRLARCIFDKM 203
S++ C L +L + +H +I+ G + + S LL+ + + A +FD +
Sbjct: 7 SLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++ W + G+AL + A+ L+ M G+ PNS F +L +C+ + +
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
+ K +G + ++ + + G+L++A + + + + + L++
Sbjct: 124 QLHGQVLK-FGFDLDLYIHTSLISMYVQNGRLEDAQK-VXDKSSHRDVVSYTALITGYAS 181
Query: 324 HKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+E A K+ ++I + D + A + + YA +K+A L
Sbjct: 182 RGXIESAHKMFDEIPVKDVVSWNAXI---SGYAETGNYKEALEL 222
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VS+ ++I G AR GL EA+ + +M + PD +T+++VL A Y + +G
Sbjct: 206 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 265
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + L ++ + ++L++MYAKC ++++ +F + VKD ISWN+II G +N
Sbjct: 266 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 325
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E L F +L K P + + ++PACA L+ G+++HG I+RNG+ + +
Sbjct: 326 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 385
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+DMYAKCG + LA +FD + D+VSWT +I G +HG +AI+LF QM + G+
Sbjct: 386 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 445
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + ++FV++L ACSH+GL+D+ W +FN M + I P+ EHYA + D+L R G L +AY
Sbjct: 446 EADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAY 505
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI NM P +W LL CR+H +V+LA KVAEK+F ++P N G YV+++N YA A
Sbjct: 506 RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAE 565
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+ LR + +G++K P CSWIE+K + FVAGD S+P I L+++ RM
Sbjct: 566 KWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMI 625
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L D EE +K+ L HSE+LA+ GII + G IR+ KNLRVCGDCH
Sbjct: 626 EEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHE 685
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ +REI++RD++RFH F+DG CSC +W
Sbjct: 686 MAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 11/303 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ LA++G + ++ + ++M + ++ DS+T S V F+ V G+++HG+ +
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +G+SL+ Y K RV+ + ++F + +D ISWNSII G V NGL ++GL
Sbjct: 72 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QML++ I+ + S+ CA + LG+ +H ++ F ++LLDMY+
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG++ A+ +F +M +VS+T++I G A G A +A+ LFE+ME++G+ P+ A
Sbjct: 192 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 251
Query: 249 VLTACSHAGLIDKA-----WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
VL C+ L+D+ W N + D ++ A+ D+ + G +QEA S
Sbjct: 252 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN------ALMDMYAKCGSMQEAELVFS 305
Query: 304 NMH 306
M
Sbjct: 306 EMR 308
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWN++I G NGL E+ L++ QM ++ D T+ SV AD + G
Sbjct: 105 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H ++ ++L++MY+KC ++ + +F + + +S+ S+IAG +
Sbjct: 165 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 224
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E +K F +M I P + ++++ CA L GK++H I N ++F++
Sbjct: 225 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 284
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE-QMEKDGV 239
++L+DMYAKCG+++ A +F +M + DI+SW +I G + + A++A+SLF +E+
Sbjct: 285 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 344
Query: 240 KPNSVAFVAVLTACSHAGLIDKA 262
P+ VL AC+ DK
Sbjct: 345 SPDERTVACVLPACASLSAFDKG 367
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 90/158 (56%)
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+ ++ A+ WN ++ ++G F + F++M+ + ++ +FS + + + L ++H G
Sbjct: 4 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 63
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+QLHG I+++GF + + +SL+ Y K + AR +FD+M D++SW ++I G +
Sbjct: 64 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 123
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
G A +S+F QM G++ + V+V C+ + LI
Sbjct: 124 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 161
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/510 (45%), Positives = 330/510 (64%), Gaps = 1/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L WN +I G A NG YE A+++ QM + L PD FT VL + + +GK+IH
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR GL+++V +G++LI+MYAKC VE + ++F + +D + WNS++A QNG D
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L R M +KP +F + A A L GK+LHG R+GF+ N + ++L+
Sbjct: 186 ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALM 245
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAK G++ +AR +F+ ++ +VSW A+I G A+HG+A++A+ LF++M K V P+ +
Sbjct: 246 DMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHI 304
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL ACSH GL+++ +F SM D+ I P+ +HY + DLLG G+L+EAY+ I
Sbjct: 305 TFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIME 364
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW LL +C++H NVE+ EK+ ++P++ G YVILSN YA A +W
Sbjct: 365 MRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGV 424
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR M NKG+KK+ ACSWIEV NK +AF++ D SHP I LK + M++ GY
Sbjct: 425 ARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYA 484
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P V HDVE+++K +++ HSERLAI FG+I T GT + IIKNLR+C DCH AIKFI
Sbjct: 485 PQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFI 544
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +REI +RD +R+HHF+DG CSCGD+W
Sbjct: 545 SKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 131/239 (54%), Gaps = 1/239 (0%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H + G+ N + + L+N+Y C + ++H LF + ++ WN +I G
Sbjct: 20 GKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAW 79
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG ++ + + QM + P +F ++ AC+ L+ + GK++H +IR+G + ++F+
Sbjct: 80 NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG + AR +FDK+D D+V W +++ + +G ++++L M +G+
Sbjct: 140 GAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGL 199
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP FV + A + GL+ + + + +G + + A+ D+ ++G + A
Sbjct: 200 KPTEGTFVISIAASADNGLLPQG-KELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVA 257
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++S++ +C + GKQLH I + G N +A+ L+++Y C ++ A +FD++
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++ W +I G A +G AISL+ QM G+ P+ F VL ACS +++
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + G+ AA+ D+ + G ++ A +
Sbjct: 124 IHKDVIRS-GLESDVFVGAALIDMYAKCGCVESARQ 158
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 332/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SW +I G +NGL EA+++ R+M NL+ D +T SVL + + +G
Sbjct: 234 MQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEG 293
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y IR N+ +GS+L++MY KC ++ + +F + K+ +SW +++ G QN
Sbjct: 294 KQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQN 353
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E +K F M I+P + S++ +CA+L +L G Q H + +G + ++
Sbjct: 354 GYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVS 413
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG+I + +F +M D VSWTA++ G A G A++ + LFE M G K
Sbjct: 414 NALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFK 473
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+ VL+ACS AGL+ K F SM K++ I P +HY + DL RAG+L+EA +
Sbjct: 474 PDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARK 533
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI+ M P W +LLS+CR H+N+E+ AE + ++P+N +Y++LS+ YAA +
Sbjct: 534 FINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGK 593
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A+LR MR+KG++K P CSWI+ KN+ + F A D+S+PF +I L++L +M Q
Sbjct: 594 WEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQ 653
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VLHDV++ +K +L +HSE+LAI FG+I P G IR++KNLRVCGDCH A
Sbjct: 654 EGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNA 713
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKI QREI+VRD +RFH F+DG+CSCGD+W
Sbjct: 714 TKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 189/354 (53%), Gaps = 38/354 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEE---ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP D+VSWN++I A G + A N++ G NL + LS++L + + V
Sbjct: 101 MPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNL--NRIALSTMLILASKQGCV 158
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAK----------------------------- 88
G ++HG+ ++ G + V +GS L++MY+K
Sbjct: 159 HLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGL 218
Query: 89 --CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
C+R+EDS +LF + KD+ISW ++IAG QNGL E + FR+M + ++ +F
Sbjct: 219 MRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFG 278
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ AC + L GKQ+H IIR + DN+F+ S+L+DMY KC +I+ A +F KM+
Sbjct: 279 SVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCK 338
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
++VSWTA+++G +G + +A+ +F M+ +G++P+ +V+++C++ +++ + F
Sbjct: 339 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEG-AQF 397
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ G+ A+ L G+ G +++++ S M + E W L+S
Sbjct: 398 HCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM-SYVDEVSWTALVSG 450
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 36/247 (14%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P+ F L++++ +A + + + + + L + ++L++ Y+K A + + R+
Sbjct: 42 PEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYS----WNTLLSSYSKLACLPEMERV 97
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTT 157
F +P +D +SWNS+I+ G + +K + ML ++ S+++ +
Sbjct: 98 FHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGC 157
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-------------- 203
+HLG Q+HG +++ GF +F+ S L+DMY+K G + AR FD+M
Sbjct: 158 VHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAG 217
Query: 204 ---------------DLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
D+ D +SWTA+I G +G +AI LF +M + ++ + F
Sbjct: 218 LMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTF 277
Query: 247 VAVLTAC 253
+VLTAC
Sbjct: 278 GSVLTAC 284
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 334/510 (65%), Gaps = 1/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN++I +N +EA+ I ++M + +KP ++ L AD D+ +G+ IH
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ LD NV + +SLI+MY KC V+ + +F L + +SWN++I G QNG
Sbjct: 361 KLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPI 420
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L +F QM +KP ++ S++ A A L+ H K +HG ++RN D N+F+ ++L+
Sbjct: 421 EALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALV 480
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG I +AR IFD M + +W A+I G HG A+ LFE+M+K ++PN V
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGV 540
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++V++ACSH+GL++ F+ M ++Y I PS +HY A+ DLLGRAG+L EA++FI
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P NV+ +L AC++HKNV A KVAE++F ++P + G +V+L+N Y AA W+
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKV 660
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+RV M +G++KTP CS +E+KN+ ++F +G +HP +I L++L+ ++++ GYV
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYV 720
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT +L +E++ K+ LL HSE+LAI FG++ T GTTI + KNLRVC DCH A K+I
Sbjct: 721 PDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REIIVRD RFHHF++G CSCGDYW
Sbjct: 780 SLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 153/262 (58%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT++ G ++NG+ AL +V M NLKP T+ SVLP + + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIG 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYA+R G D+ V I ++L++MYAKC ++ + LF + ++ +SWNS+I VQN
Sbjct: 256 KEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQN 315
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + F++ML +KP VS + ACA L L G+ +H + D N+ +
Sbjct: 316 ENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVV 375
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KC + A +F K+ IVSW A+I+G A +G +A++ F QM+ VK
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVK 435
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P++ +V+V+TA + + A
Sbjct: 436 PDTFTYVSVITAIAELSITHHA 457
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 154/256 (60%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V + T++ G A+ ++AL +M + ++P + + +L + D ++ GKEIHG
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G ++ + L NMYAKC +V ++ ++F +P +D +SWN+I+AG QNG+
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ M +KP ++ S++PA + L + +GK++HG +R GFD + IA++L+DM
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG+++ AR +FD M ++VSW ++I + N +A+ +F++M +GVKP V+
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340
Query: 247 VAVLTACSHAGLIDKA 262
+ L AC+ G +++
Sbjct: 341 MGALHACADLGDLERG 356
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 123/241 (51%), Gaps = 9/241 (3%)
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
++GL + L++++ + V+++ R+F + K + + +++ G + D+ LK
Sbjct: 62 KNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALK 121
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FF +M +++P +F+ ++ C L +GK++HG ++++GF ++F + L +MYA
Sbjct: 122 FFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KC + AR +FD+M D+VSW ++ G + +G A A+ + M ++ +KP+ + V+
Sbjct: 182 KCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVS 241
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQEAYEFISN 304
VL A S LI Y + F+ A+ D+ + G L+ A
Sbjct: 242 VLPAVSALRLIR-----IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDG 296
Query: 305 M 305
M
Sbjct: 297 M 297
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 336/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSWN+++ G +NG E+A+ + +M + P T+ L AD D+ +G
Sbjct: 309 MDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + L +++ + +SLI+MY+KC RV+ + +F L + +SWN++I G QN
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F +M +KP + S++PA A L+ K +HG IIR+ D N+F+
Sbjct: 429 GRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT 488
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+KCG I +AR +FD + +++W A+I G HG A+ LF++M+K V+
Sbjct: 489 TALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVE 548
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +++V++ACSH+GL+D+ +F SM +DYG+ PS +HY A+ DLLGRAG+++EA++
Sbjct: 549 PNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWD 608
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P V+ AC++HKN+E+ K A+K+F ++P+ G +V+L+N YA+ +
Sbjct: 609 FIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 668
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M KG+KKTP CS +E++N+ ++F +G +HP RI L+EL+ ++
Sbjct: 669 WSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKA 728
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT +L DVE++ ++ LL HSE+LAI FG++ T GTTI + KNLRVCGDCH A
Sbjct: 729 AGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNA 787
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS + REIIVRD RFHHF++G CSCGDYW
Sbjct: 788 TKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 159/263 (60%), Gaps = 2/263 (0%)
Query: 2 PVSDLVS--WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
P+ D + ++T++ G A+N E AL + +M ++KP + + +L + D D+ +
Sbjct: 106 PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKR 165
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHG I + ANV + ++NMYAKC +++D++++F +P +D +SWN+IIAG Q
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L+ +M +P ++ +++PA A + L +GK +HG IR GF + I
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L DMY+KCG++ AR IFD MD +VSW +++ G +G AI++FE+M ++G+
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 240 KPNSVAFVAVLTACSHAGLIDKA 262
P V + L AC+ G +++
Sbjct: 346 DPTGVTIMEALHACADLGDLERG 368
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 153/254 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ++NG ++AL +V +M + +PDS TL +VLP AD ++ G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHGYAIR G V I ++L +MY+KC VE + +F + K +SWNS++ G VQN
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ + F +ML I P V+ + ACA L L GK +H + + ++ +
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+KC + +A IF+ ++ VSW A+I+G A +G +A++ F +M+ G+K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 241 PNSVAFVAVLTACS 254
P+S V+V+ A +
Sbjct: 448 PDSFTMVSVIPALA 461
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 11/292 (3%)
Query: 61 KEIHG---YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS--WNSIIA 115
KE+H I++GL + L+++++K + ++ R+F P+ D + +++++
Sbjct: 63 KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVF--EPIDDKLDALYHTMLK 120
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G +N + L F +M +KP +F+ ++ C L GK++HG +I N F
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F + +++MYAKC I A +FD+M D+VSW +I G + +G A A+ L +M+
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+G +P+S+ V VL A + GL+ S + G A A+AD+ + G +
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIR-AGFAKLVNISTALADMYSKCGSV 299
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNM 345
+ A M T W +++ + E A V EK+ IDP +
Sbjct: 300 ETARLIFDGMDQ-KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 334/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +I R G +++ + ++MG ++PD F ++S L FA + G
Sbjct: 146 MEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHG 205
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGYAIR+G++ + + ++L+ MY KC +E++ +F + KD ISWN++I G ++
Sbjct: 206 KSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRS 265
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E F +ML+ +++P V+ + I+PA A L++L G+++H +R G+ ++ F+A
Sbjct: 266 NLANEAFTLFNEMLL-QLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVA 324
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG + LAR +FD + +++SWT +I G +HG DAI+LFEQM+ G++
Sbjct: 325 NALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQ 384
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P++ +F A+L ACSH+GL D+ W +FN+M ++ I P +HYA + DLL G L+EAYE
Sbjct: 385 PDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYE 444
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P ++W++LL CR+H+NV+LA KVAE +F ++P N G YV+L+N YA A R
Sbjct: 445 FIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAER 504
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ L+ + +G+++ CSWIEV+ KA+ F A +++HP RI E L ++ RM++
Sbjct: 505 WEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQE 564
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EG+ P K L ++ L HS +LA+ FG++ G IR+ KN RVC CH A
Sbjct: 565 EGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEA 624
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ REII+RD++RFHHFE+G+CSC YW
Sbjct: 625 AKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 207/421 (49%), Gaps = 50/421 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SWN++I G A NGLY++A+ + +M + DS TL SV+P G
Sbjct: 45 MPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIG 104
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HGY++R GL + +G++L++MY+ C+ ++++F + K+ +SW ++I +
Sbjct: 105 GVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRA 164
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G FD+ F++M + I+P + +S + A A +L GK +HG IRNG ++ + +A
Sbjct: 165 GHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVA 224
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY KCG + AR IFD + D +SW +I G + A++A +LF +M ++
Sbjct: 225 NALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LR 283
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN+V +L A + +++ H AV R G L++ +
Sbjct: 284 PNAVTMACILPAAASLSSLERGREM---------------HAYAV-----RRGYLEDNF- 322
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
N + + C A +A ++F M+ N+ ++ I+ Y
Sbjct: 323 ---------VANALVDMYVKCG-------ALLLARRLFDMLTNKNLISWTIMIAGYGMHG 366
Query: 360 RWKDAASLRVFMRNKGMKKTP--------ACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
R +DA +L M+ G++ ACS ++++ + F ++ HRI L
Sbjct: 367 RGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNE---HRIEPKL 423
Query: 412 K 412
K
Sbjct: 424 K 424
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 3/295 (1%)
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+ G +HGY +++G A + ++LI+ YAK R+ED+ +F +P +D ISWNSII GC
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
NGL+D+ ++ F +M + + + S+MPAC +G +HG +R G
Sbjct: 61 ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++LLDMY+ C + R IF M+ ++VSWTA+I G+ LF++M +
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+ A + L A + + S ++ GI A+ ++ + G ++E
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRN-GIEEVLPVANALMEMYVKCGYMEE 239
Query: 298 AYEFISNMHAGPTENVWLTLLSA-CRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
A FI + W TL+ R + E E + + PN + IL
Sbjct: 240 A-RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACIL 293
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 331/492 (67%)
Query: 23 EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSL 82
++AL + + K D TL++ V + +GK+IH +AI+ G D+++ + S +
Sbjct: 12 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71
Query: 83 INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
++MY KC + ++ +F + D ++W S+I+GCV NG D+ L+ + +M +++ P
Sbjct: 72 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
+F++++ A + +T L G+QLH +I+ + F+ +SL+DMYAKCGNI A +F K
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 191
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M++ +I W A+++G A HGNA +A++LF+ M+ G++P+ V+F+ +L+ACSHAGL +A
Sbjct: 192 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 251
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
+ Y +SM DYGI P EHY+ + D LGRAG +QEA + I M + ++ LL ACR
Sbjct: 252 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 311
Query: 323 VHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPAC 382
+ +VE +VA ++F ++P + AYV+LSN YAAA RW D R M+ K +KK P
Sbjct: 312 IQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGF 371
Query: 383 SWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNL 442
SWI+VKN + FV D+SHP I + ++E+++ + ++GYVPDT+ VL DVE+E+K+
Sbjct: 372 SWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERS 431
Query: 443 LYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHH 502
LYYHSE+LAI +G+I TP TTIR+IKNLRVCGDCH AIK+ISK+ +REI++RD +RFHH
Sbjct: 432 LYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHH 491
Query: 503 FEDGKCSCGDYW 514
F DG CSCGDYW
Sbjct: 492 FRDGVCSCGDYW 503
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V+W ++I G NG ++AL I +M + PD +T ++++ + + +G+++H
Sbjct: 95 DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 154
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ ++ +G+SL++MYAKC +ED++RLF + V++ WN+++ G Q+G +
Sbjct: 155 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE 214
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E + F+ M I+P VSF I+ AC+H T + LH G + + S L
Sbjct: 215 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 274
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
+D + G ++ A + + M S ++G
Sbjct: 275 VDALGRAGLVQEADKVIETMPFKASASINRALLG 308
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++ WN ++VGLA++G EEA+N+ + M + ++PD + +L + +
Sbjct: 192 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 251
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN-SIIAGCV 118
E +H +G++ + S L++ + V+++ ++ +P K + S N +++ C
Sbjct: 252 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 311
Query: 119 QNGLFDEG 126
G + G
Sbjct: 312 IQGDVEXG 319
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/545 (42%), Positives = 335/545 (61%), Gaps = 31/545 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ S++ WNT + A +A+++ ++ ++ PD +T S VL + +DV G
Sbjct: 73 LDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNG 132
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARV---------------------------- 92
K +HGY + GL +N+ + + ++++YA C +
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKM 192
Query: 93 ---EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
E +++LF +P ++ SW S+I G Q G E + F +M A + P V+ +++
Sbjct: 193 GDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVL 252
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
ACA + L LG+++H R+G++ N+ + ++L+DMY KCG + A IFD M+ +V
Sbjct: 253 VACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVV 312
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW+A+I G A HG A DA++LF +M GVKPN+V F+ +L ACSH G+++K YF SM
Sbjct: 313 SWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASM 372
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
T+DYGI P EHY + DL RAG LQEA+EFI NM P VW LL C+VHKN++L
Sbjct: 373 TRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKL 432
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A + + +DP N G YV+LSN YA A RW+D A +R MR++G+KKTP S I V+
Sbjct: 433 AEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEG 492
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
Y FVAGD +HP I + ++LL+RM+ +GYVP+T VL D+EE+QK+ LY HSE+
Sbjct: 493 VVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEK 552
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+VFG+I T GT IRI+KNLRVC DCH A+K IS + REI+VRD +RFH F++G CS
Sbjct: 553 LAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCS 612
Query: 510 CGDYW 514
CGDYW
Sbjct: 613 CGDYW 617
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 35/279 (12%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F LL + WN+ + + + + F ++ I P H + S ++ AC+ L
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV-------- 209
+ GK +HG + + G NMF+ + ++ +YA CG I +AR +FDKM D++
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 210 -----------------------SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
SWT++I G A G + +AI LF +ME G+ PN V
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
VAVL AC+ G + + + G + + D+ + G L++A NM
Sbjct: 249 VAVLVACADMGNLVLG-RRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME 307
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPN 343
T W +++ H E A + K+ + PN
Sbjct: 308 E-RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPN 345
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
KQLH +++ + S + + A + A+ IF +D ++ W + A
Sbjct: 32 KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFE 280
+ DAISLF ++ + + P+ VL ACS L+D + + + G+ +
Sbjct: 92 DSPADAISLFYRLREFDISPDHYTCSFVLKACSR--LLDVRNGKIVHGYVEKLGLQSNMF 149
Query: 281 HYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI 340
+ L G++ A + M P +V + R+ K + G A K+F
Sbjct: 150 LQNMIVHLYALCGEIGVARKVFDKM---PQRDVITWNIMIARLVKMGDAEG--AYKLFAE 204
Query: 341 DPN-NMGAYVILSNTYAAARRWKDAASLRVFMRNKGM 376
P N+ ++ + YA + K+A L + M + G+
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGL 241
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 322/510 (63%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++W T++ GL +NGL EAL++ R+M + D +T S+L + +GK+IH
Sbjct: 242 DSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIH 301
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y R + NV +GS+L++MY+KC + + +F + ++ ISW ++I G QN +
Sbjct: 302 AYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M + IKP + S++ +CA+L +L G Q H + +G + ++++L+
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALV 421
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A +FD+M HD VSWTA++ G A G A + I LFE+M +G+KP+ V
Sbjct: 422 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGV 481
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACS AGL++K YF+SM KD+GI P +HY + DL R+G+ +EA EFI
Sbjct: 482 TFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQ 541
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLS+CR+ N+E+ AE + DP N +YV+L + +AA +W +
Sbjct: 542 MPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEV 601
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR++ +KK P CSWI+ KNK + F A D+SHPF RI E L+ L +M +EGY
Sbjct: 602 AHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYK 661
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD VLHDV + K +++ +HSE+LAI FG+I P IRI+KNLRVC DCH A KFI
Sbjct: 662 PDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFI 721
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R+I+VRD RFH F DG CSCGD+W
Sbjct: 722 SKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 174/337 (51%), Gaps = 33/337 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VS+N +I G + G ++ + R + +++P TLS+++ + + D
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRAL 164
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
G +H +R G A +GS L++MYAK
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +ED+ LF L+ +D+I+W +++ G QNGL E L FR+M + +F SI
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC L L GKQ+H I R ++DN+F+ S+L+DMY+KC +IRLA +F +M +I
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWTA+I+G + + +A+ F +M+ DG+KP+ +V+++C++ +++ + F+
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG-AQFHC 403
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ G+ A+ L G+ G +++A+ M
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 14/231 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +IVG +N EEA+ +M +KPD FTL SV+ A+ + +G
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H A+ GL + + ++L+ +Y KC +ED+HRLF + D +SW +++ G Q
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF 458
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-------KQLHGCIIRNGF 173
G E + F +ML +KP V+F ++ AC+ + G ++ HG +
Sbjct: 459 GKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV---PI 515
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
DD+ + ++D+Y++ G + A +M D W ++ L GN
Sbjct: 516 DDHY---TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P +F L+ +L +A + + + + D N+ ++L++ A V D RL
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRV----FDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTT 157
F +P +DA+S+N++I G G ++ +R +L + ++P ++ S+++ + L+
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
LG +H ++R GF F+ S L+DMYAK G IR AR +F +M+ +V + +I G
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
DA LF+ M V +S+ + ++T + GL +A F M + G+
Sbjct: 222 LLRCKMIEDAKGLFQLM----VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE-GVGI 276
Query: 278 SFEHYAAVADLLGRAGKLQEAYE 300
+ ++ G L+E +
Sbjct: 277 DQYTFGSILTACGALAALEEGKQ 299
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/514 (43%), Positives = 341/514 (66%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +S+ T+I G A + + EA+ + ++ L P+ FT +SVL A + G
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACATMEGLNLG 157
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH + I+ GL ++V + ++L+++YAKC R+E+S LF P ++ ++WN++I G VQ
Sbjct: 158 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQL 217
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L+ F ML +++ V++SS + ACA L L G Q+H ++ FD ++ +
Sbjct: 218 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT 277
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+I+ AR +FD M+ D VSW A+I G ++HG +A+ +F++M++ VK
Sbjct: 278 NALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVK 337
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FV VL+AC++AGL+D+ +YF SM +D+GI P EHY + LLGR G L +A +
Sbjct: 338 PDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVK 397
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + P+ VW LL AC +H ++EL A+++ ++P + +V+LSN YA A+R
Sbjct: 398 LIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKR 457
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + AS+R M+ KG+KK P SWIE + ++F GD SHP IN L+ L + ++
Sbjct: 458 WDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKK 517
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P+ VL DVE+E+K+ LL+ HSERLA+ FGII TP G+ IRI+KNLR+C DCH A
Sbjct: 518 AGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAA 577
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISK+VQREI+VRD +RFHHF++G CSCGDYW
Sbjct: 578 IKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 170/337 (50%), Gaps = 13/337 (3%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQ-MGNVNLKPDSFTLSSVLPIFADYV---DVIKGK 61
+V N ++ +R G ++ + ++ +G+V+ P F + D + + +GK
Sbjct: 1 MVCRNNFLIQFSRRGFSVQSAKLTQEFVGHVS--PSEFNSHAYANALQDCIQKDEPSRGK 58
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H ++ G ++ + L+NMY K + D+ +LF +P ++ IS+ ++I G ++
Sbjct: 59 GLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESV 118
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F E ++ F + L ++ P +F+S++ ACA + L+LG Q+H +I+ G ++F+++
Sbjct: 119 RFLEAIELFVR-LHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSN 177
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+D+YAKCG + + +F + + V+W VI+G+ G+ A+ LF M + V+
Sbjct: 178 ALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQA 237
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
V + + L AC+ ++ +S+T A+ D+ + G +++A
Sbjct: 238 TEVTYSSALRACASLAALEPGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RL 295
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
+ ++ E W ++S +H G+ A +IF
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHG----LGREALRIF 328
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 22/237 (9%)
Query: 132 QMLIAKIKPRHV---SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
Q + + P ++++ + C GK LH I++ G ++F + LL+MY
Sbjct: 25 QEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYV 84
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K + A +FD+M + +S+ +I G A +AI LF ++ ++ V PN F +
Sbjct: 85 KSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFAS 143
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL AC+ ++ + K G+ A+ D+ + G+++ + E +
Sbjct: 144 VLQACATMEGLNLGNQIHCHVIK-IGLHSDVFVSNALMDVYAKCGRMENSMELFAE---S 199
Query: 309 PTEN--VWLTLLSACRVHKNVELA-GKVAEKIFMIDPNNMGAYVILSN--TYAAARR 360
P N W T++ +V+L G+ A ++F+ NM Y + + TY++A R
Sbjct: 200 PHRNDVTWNTVIVG-----HVQLGDGEKALRLFL----NMLEYRVQATEVTYSSALR 247
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/543 (41%), Positives = 332/543 (61%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V+WN +I G A GLY EA + R+M ++ D FT +SV+ + A+ GKE+H Y
Sbjct: 255 VAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAY 314
Query: 67 AIRH----GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV---- 118
++ D + + ++LI Y KC +V+ + +F +P +D +SWN I++G V
Sbjct: 315 FLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRC 374
Query: 119 ---------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
Q G +E LKFF +M + +P +F+ + +
Sbjct: 375 MDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIIS 434
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C+ L +L G+QLH ++R G++ ++ ++L+ MYA+CG + A C+F M D +SW
Sbjct: 435 CSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISW 494
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I HG AI LFE+M K+G+ P+ ++F+ V++ACSHAGL+ + YF+SM
Sbjct: 495 NAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHN 554
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
YG+ P EHYA + DLL RAGK EA E + +M P +W LL+ CR+H N++L
Sbjct: 555 VYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGI 614
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
+ AE++F + P + G YV+LSN YA A +W D A +R MR++G+KK P CSWIEV+NK
Sbjct: 615 EAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKV 674
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
++F+ GD +HP +I L++L+ M + GYVPDTK VLHDVE + K++ L HSE+LA
Sbjct: 675 HSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLA 734
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ +G + P G T+R+ KNLR+CGDCH A KF+SK+V REI+VRD RFHHF DGKCSCG
Sbjct: 735 VAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCG 794
Query: 512 DYW 514
DYW
Sbjct: 795 DYW 797
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 125/239 (52%), Gaps = 8/239 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW +I GLA+ G EEAL +M +P + + + + + G
Sbjct: 385 MPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHG 444
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +R+G ++++ G++LI MYA+C V+ +H LF +P DAISWN++IA Q+
Sbjct: 445 RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQH 504
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ----LHGCIIRNGFDDN 176
G + ++ F +ML I P +SF +++ AC+H + G++ +H N +++
Sbjct: 505 GQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEH 564
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQM 234
+ ++D+ + G A+ + + M W A++ G +HGN I E++
Sbjct: 565 Y---ARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERL 620
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 170/377 (45%), Gaps = 62/377 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + D V +N +I + N A+ + M N +PD++T +SVL A + K
Sbjct: 107 LGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKH 166
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCAR---------VEDSHRLFCLLPVKDAISW 110
+++H ++ G + ++LI+ Y KCA + ++ +LF +P +D +SW
Sbjct: 167 CQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSW 226
Query: 111 -------------------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
N++I+G GL+ E + FR+M+++KI+
Sbjct: 227 TTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQ 286
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN----GFDDNMFIASSLLDMYAKCGNIRL 195
+F+S++ CA+ LGK++H ++ D M + ++L+ Y KCG + +
Sbjct: 287 LDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A+ IF+KM D+VSW ++ G +A S F +M + N ++++ +++ +
Sbjct: 347 AQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEK----NILSWIIMISGLAQ 402
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA---------YEFISNMH 306
G ++A +FN M K G P +A G L+ Y + S++
Sbjct: 403 IGFAEEALKFFNRM-KLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLS 461
Query: 307 AGPTENVWLTLLSACRV 323
AG N +T+ + C V
Sbjct: 462 AG---NALITMYARCGV 475
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 155/371 (41%), Gaps = 55/371 (14%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
++LI Y+ ++ S ++F P+ +D++ +N++I N ++ F M
Sbjct: 83 TTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN 142
Query: 138 IKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN---- 192
+P + +F+S++ A A + +QLH ++++G + ++L+ Y KC
Sbjct: 143 FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSA 202
Query: 193 -----IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
+ AR +FD+M D +SWT +I G + N DA F K VA+
Sbjct: 203 QSSSLMAEARKLFDEMPNRDELSWTTIITG-YVKNNDLDAAKEFLNGTS---KKLGVAWN 258
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG----RAGKLQEAYEFIS 303
A+++ +H GL +A+ F M F + ++ R GK AY F+
Sbjct: 259 AMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAY-FLK 317
Query: 304 NMH------AGPTENVWLTLLSACRVHKNVELAGKV--AEKIFMIDPN-NMGAYVILSNT 354
+ A P N +T C GKV A++IF P ++ ++ I+ +
Sbjct: 318 TVANPAPDVAMPVNNALITFYWKC---------GKVDIAQEIFNKMPERDLVSWNIILSG 368
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y R +A S M K + SWI ++G F EALK
Sbjct: 369 YVNVRCMDEAKSFFNEMPEKNI-----LSWI-------IMISGLAQIGF---AEEALK-F 412
Query: 415 LERMEQEGYVP 425
RM+ +G+ P
Sbjct: 413 FNRMKLQGFEP 423
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 33/126 (26%)
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
L + +H +I +GF I + L+D+Y+K + AR +FD++ DIV+ T +I +
Sbjct: 31 LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90
Query: 220 LHG---------------------------------NAHDAISLFEQMEKDGVKPNSVAF 246
G + H AI LF M++D +P++ F
Sbjct: 91 AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150
Query: 247 VAVLTA 252
+VL A
Sbjct: 151 TSVLGA 156
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/516 (44%), Positives = 326/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + ++M N++PD T+ +VL A V G
Sbjct: 158 IPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELG 217
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y+KC +VE + LF L KD +SWN++I G
Sbjct: 218 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHM 277
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD--DNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + D +
Sbjct: 278 NLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPS 337
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ M + SW A+I G A+HG A+ LF +M K+G
Sbjct: 338 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG 397
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G +D F SMT+DY I P EHY + DLLG +G +EA
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA 457
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I M P +W +LL ACR H N+ELA A + ++P N G+YV+LSN YA A
Sbjct: 458 KEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
W + A +R + KGMKK P CS IE+ ++ + F+ GDK HP I L+E+ +
Sbjct: 518 GEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALL 577
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 578 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 637
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K +SKI +REII RD +RFHHF DG CSC D+W
Sbjct: 638 EATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 177/331 (53%), Gaps = 36/331 (10%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT++ G A + AL + M ++ L P+S+T +L A +G++IHG+ +
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHR------------------------------- 97
+ G + ++ + +SLI+MYA+ R+ED+H+
Sbjct: 94 KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +PVKD +SWN++I+G + G + E L+ F++M+ ++P + +++ ACA +
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
+ LG+Q+H I +GF N+ I ++L+D+Y+KCG + A +F+ + D+VSW +I G
Sbjct: 214 VELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGG 273
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-W--SYFNSMTKDYG 274
+A+ LF++M + G PN V V++L AC+H G ID W Y + KD
Sbjct: 274 YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVT 333
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
APS ++ D+ + G ++ A++ ++M
Sbjct: 334 NAPSLR--TSLIDMYAKCGDIEAAHQVFNSM 362
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%), Gaps = 32/232 (13%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F + + + WN+++ G + LK + M+ + P +F ++ +CA
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
G+Q+HG +++ G++ ++++ +SL+ MYA+ G + A +FD+ D+VS+TA+I G
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 218 NALHGNAH-------------------------------DAISLFEQMEKDGVKPNSVAF 246
A GN +A+ LF++M K V+P+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V VL+AC+ + ++ +S D+G + + A+ DL + G+++ A
Sbjct: 202 VTVLSACAQSRSVELG-RQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 333/526 (63%), Gaps = 16/526 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W VI G ++ G EALN+ RQM P+ T+ SVL A +G EIH
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424
Query: 65 GYAIRH----------GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNS 112
Y++++ G D ++ + ++LI+MY+KC + + +F +P+ ++ ++W
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+I G Q G ++ LK F +M+ + P + S I+ ACAHL + +GKQ+H ++R
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544
Query: 171 NGFDDN--MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+ ++ F+A+ L+DMY+KCG++ AR +FD M +SWT+++ G +HG +A+
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F++M K G P+ + F+ VL ACSH G++D+ SYF+SM+ DYG+ P EHYA DL
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAY 348
L R+G+L +A+ + +M PT VW+ LLSACRVH NVELA K+ ++ N G+Y
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 724
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
++SN YA A RWKD A +R M+ G+KK P CSW++ + +F GD+SHP +I
Sbjct: 725 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 784
Query: 409 EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRII 468
L+ L++R++ GYVP+T LHDV+EE+K NLL HSE+LA+ +G++ T G IRI
Sbjct: 785 ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRIT 844
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLRVCGDCH+A +ISKIV EI+VRD SRFHHF++G CSCG YW
Sbjct: 845 KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 199/437 (45%), Gaps = 45/437 (10%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S V WN +I + G + A+N+ +M +PD FTL VL + G
Sbjct: 118 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 177
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP---VKDAISWNSIIAGCVQN 120
HG +G ++NV I ++L+ MY++C +E++ +F + + D ISWNSI++ V++
Sbjct: 178 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 237
Query: 121 GLFDEGLKFFRQM-LIAKIKPRH-----VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
L F +M LI KP + +S +I+PAC L + K++HG IRNG
Sbjct: 238 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 297
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+D YAKCG + A +F+ M+ D+VSW A++ G + GN A LF+ M
Sbjct: 298 PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNM 357
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ + + V + AV+ S G +A + F M G P+ +V G
Sbjct: 358 RKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS-GSLPNCVTIISVLSACASLGA 416
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+ E +HA +N LTL + F + ++ Y L +
Sbjct: 417 FSQGTE----IHAYSLKNCLLTL-----------------DNDFGGEDEDLMVYNALIDM 455
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y+ R +K A R + +++ +W + G H Y N+ALK
Sbjct: 456 YSKCRSFKAA---RSIFDDIPLEERNVVTWT-------VMIGG---HAQYGDSNDALKLF 502
Query: 415 LERM-EQEGYVPDTKEV 430
+E + E G P+ +
Sbjct: 503 VEMISEPYGVAPNAYTI 519
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 28/225 (12%)
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG--------------------FDDNM 177
+ P H F+S++ C T+H Q+H II +G F
Sbjct: 35 VYPSH--FASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPR 89
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ + ++ Y CG A + +++ V W +I + G AI++ +M +
Sbjct: 90 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G +P+ VL AC + S F+ + G + A+ + R G L+E
Sbjct: 150 GTRPDHFTLPHVLKACGELPSY-RCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208
Query: 298 AYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMI 340
A + ++V W +++SA N A + K+ +I
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 253
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 329/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L WN +I A NG +E A+++ QM LKPD+FTL VL + + +G
Sbjct: 119 IPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEG 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH IR G + +V +G++L++MYAKC V D+ +F + +DA+ WNS++A QN
Sbjct: 179 RVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L +M ++P + +++ + A + L G+++HG R+GF N +
Sbjct: 239 GHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVK 298
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++++A +F+++ +VSW A+I G A+HG A +A+ LFE+M K+ +
Sbjct: 299 TALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-Q 357
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FV L ACS L+D+ + +N M +D I P+ EHY + DLLG G+L EAY+
Sbjct: 358 PDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYD 417
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P VW LL++C+ H NVELA EK+ ++P++ G YVIL+N YA + +
Sbjct: 418 LIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGK 477
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ A LR M +KG+KK ACSWIEVKNK YAF++GD SHP I LK L M +
Sbjct: 478 WEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMRE 537
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT V HDVEE++K +++ HSERLAI FG+I T GT + I KNLR+C DCH A
Sbjct: 538 AGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVA 597
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFISKI +REI VRD +R+HHF G CSCGDYW
Sbjct: 598 IKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 113/193 (58%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H + G+ N+ + + L+N Y+ C + ++H LF +P + WN +I
Sbjct: 77 GKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAW 136
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + + + QML +KP + + ++ AC+ L+T+ G+ +H +IR+G++ ++F+
Sbjct: 137 NGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFV 196
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG + AR +FDK+ D V W +++ A +G+ +++SL +M GV
Sbjct: 197 GAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGV 256
Query: 240 KPNSVAFVAVLTA 252
+P V V+++
Sbjct: 257 RPTEATLVTVISS 269
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
H ++S++ +C L GKQLH + + G N+ +A+ L++ Y+ C ++R A +FD
Sbjct: 58 HYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFD 117
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
K+ ++ W +I A +G AISL+ QM + G+KP++ VL ACS
Sbjct: 118 KIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACS 170
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 331/545 (60%), Gaps = 32/545 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW +I G A+NG EEAL++++ + + P +L+S + + G
Sbjct: 378 MPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETG 437
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A++ G N + ++LI+MY KC +E ++F + VKD +SWNS IA VQN
Sbjct: 438 RQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQN 497
Query: 121 GLF-------------------------------DEGLKFFRQMLIAKIKPRHVSFSSIM 149
+ DE ++FF+ ML KP + ++
Sbjct: 498 NMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILL 557
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
C L + LG+Q+H I++G D + +A++L+ MY KCG + +FD M+ DI
Sbjct: 558 SVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIF 616
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+W I G A HG +AI ++E ME GV PN V FV +L ACSHAGL+D+ W +F SM
Sbjct: 617 TWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSM 676
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
++DYG+ P EHYA + DLLGR G +Q A +FI +M P +W LL AC++HKN E+
Sbjct: 677 SRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEI 736
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
+ AEK+F +P+N G YV+LSN Y++ W + A LR M+ +G+ K P CSW++++N
Sbjct: 737 GRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRN 796
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K ++FV GDK H I+ L++L + GYVPDT+ VLHD++EEQK++ L YHSE+
Sbjct: 797 KVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEK 856
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ +G++ TP G I+I+KNLR+CGDCHT IKF+S + +R+I +RD +RFHHF +G CS
Sbjct: 857 LAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCS 916
Query: 510 CGDYW 514
CGD+W
Sbjct: 917 CGDFW 921
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 43/272 (15%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV + S ++ GLAR G EA + Q+ PD PI + +I G
Sbjct: 317 PVKSIPSQTALLTGLARCGRITEARILFEQI------PD--------PIVVSWNAMITG- 361
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
Y + V+++ LF +P ++ ISW +IAG QNG
Sbjct: 362 ------------------------YMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNG 397
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L + + + P S +S AC+H+ L G+Q+H ++ G N ++ +
Sbjct: 398 RSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCN 457
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MY KC N+ R +F++M + D VSW + I + DA +F+ M +
Sbjct: 458 ALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSR 513
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+ V++ +++A + A D+A +F +M ++
Sbjct: 514 DVVSWTTIISAYAQAERGDEAVEFFKTMLHEH 545
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 169/371 (45%), Gaps = 20/371 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W +I G R + + +I R M + PD +SVL D+
Sbjct: 183 MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVL 242
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVED-SHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + ++ G +++V IG+S++N+Y + A D + + F + ++ +W+++IA
Sbjct: 243 EVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSH 302
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G D + + + + I P + + + C +T I+ D + +
Sbjct: 303 GGRIDAAIAVYGRDPVKSI-PSQTALLTGLARCGRITEAR--------ILFEQIPDPIVV 353
Query: 180 A-SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++++ Y + G + A+ +FD+M + +SW +I G A +G + +A+ L + + ++G
Sbjct: 354 SWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNG 413
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA--AVADLLGRAGKLQ 296
+ P+ + + ACSH G ++ +S+ G F Y A+ + G+ ++
Sbjct: 414 MLPSLSSLTSSFLACSHIGALETG-RQVHSLAVKAGC--QFNSYVCNALISMYGKCRNME 470
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+ + M T + W + ++A + +E A + + + D + ++ + + YA
Sbjct: 471 YVRQVFNRMRVKDTVS-WNSFIAALVQNNMLEDARHIFDNMLSRD---VVSWTTIISAYA 526
Query: 357 AARRWKDAASL 367
A R +A
Sbjct: 527 QAERGDEAVEF 537
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 151/365 (41%), Gaps = 72/365 (19%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+++WN++I +G+ E+A + + N++ + LS +A V+
Sbjct: 59 MPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSG----YARLGRVLDA 114
Query: 61 KEI-HGYAIRHGLDANVCIG--------------------------SSLINMYAKCARVE 93
+ + G R+ + N + +S++ Y ++
Sbjct: 115 RRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMV 174
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
D+ LF +P ++ ++W +I+G V+ +G FR M P +F+S++ A
Sbjct: 175 DAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT 234
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------------------------ 189
L L + + L +++ GF+ ++ I +S+L++Y +
Sbjct: 235 GLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWS 294
Query: 190 --------CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
G I A ++ + + I S TA++ G A G +A LFEQ+ P
Sbjct: 295 TMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIP----DP 350
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
V++ A++T G++D+A F+ M I+ +A + + G+ +EA +
Sbjct: 351 IVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTIS-----WAGMIAGYAQNGRSEEALDL 405
Query: 302 ISNMH 306
+ +H
Sbjct: 406 LQALH 410
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
S+ I A+ R+ ++ +F +P +D I+WNS+I+ +G+ ++ F + ++
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SSLLDMYAKCGNIRLARC 198
+ S LG+ L + +G + +A ++++ Y + G+I +AR
Sbjct: 97 TATILLSGYA---------RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARR 147
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD M D+ SW +++ G DA +LF+QM + + +V + H
Sbjct: 148 LFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHG-- 205
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAV 285
K W F M + G +P ++A+V
Sbjct: 206 --KGWDIFRMMHHE-GASPDQSNFASV 229
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/522 (43%), Positives = 331/522 (63%), Gaps = 12/522 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++W+ VI G A+ G EAL++ RQM L+P+ TL+S+L A ++ GK+ H
Sbjct: 334 DVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTH 393
Query: 65 GYAIRHGLDAN-------VCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSIIA 115
Y I++ L+ N + + + LI+MYAKC + +F + KD ++W +I
Sbjct: 394 AYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIG 453
Query: 116 GCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
G Q+G ++ LK F Q+ K +KP + S + ACA L L LG+QLH +RN
Sbjct: 454 GYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNEN 513
Query: 174 DDN-MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+ +++ + L+DMY+K G+I AR +FD M L ++VSWT+++ G +HG +A+ LF+
Sbjct: 514 ESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFD 573
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
QM+K G + + F+ VL ACSH+G++D+ YF+ M K +GI P EHYA + DLLGRA
Sbjct: 574 QMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRA 633
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G+L EA E I NM PT VW+ LLSA R+H N+EL A K+ + N G+Y +LS
Sbjct: 634 GRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLS 693
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA ARRWKD A +R M++ G++K P CSWI+ K F GD+SHP +I L
Sbjct: 694 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLL 753
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+L++R++ GYVP T LHDV++E+K +LL+ HSE+LA+ +GI+ T G IRI KNLR
Sbjct: 754 DLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLR 813
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+CGDCH+A+ +IS I+ EI++RD+SRFHHF+ G CSC YW
Sbjct: 814 ICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 194/379 (51%), Gaps = 54/379 (14%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGN---VNLKPDSFTLSSVLPIFADYVDVIK 59
+ D+VSWN+++ + G AL I +MGN + L+PD+ TL ++LP A +
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++HG+++R+GL +V +G++L++MYAKC+++ +++++F + KD +SWN+++ G Q
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312
Query: 120 NGLFD-----------------------------------EGLKFFRQMLIAKIKPRHVS 144
G FD E L FRQM + ++P V+
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGF-------DDNMFIASSLLDMYAKCGNIRLAR 197
+S++ CA + L GKQ H +I+N +D++ + + L+DMYAKC + R+AR
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432
Query: 198 CIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFVAVLTAC 253
IFD ++ D +V+WT +I G A HG A+DA+ LF Q+ +K +KPN+ L AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
+ G + ++ + + D+ ++G + A NM NV
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNM---KLRNV 549
Query: 314 --WLTLLSACRVHKNVELA 330
W +L++ +H E A
Sbjct: 550 VSWTSLMTGYGMHGRGEEA 568
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 160/298 (53%), Gaps = 7/298 (2%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S + WN +I + GL ++ L QM + PD +T VL + + G +
Sbjct: 90 STVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASV 149
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL---PVKDAISWNSIIAGCVQN 120
H +GL +NV I +S++ MY +C ++D+H++F + ++D +SWNSI+A VQ
Sbjct: 150 HAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQG 209
Query: 121 GLFDEGLKFFRQM---LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
G L+ +M K++P ++ +I+PACA + L GKQ+HG +RNG D++
Sbjct: 210 GQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDV 269
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ ++L+ MYAKC + A +F+ + D+VSW A++ G + G+ A+SLF+ M+++
Sbjct: 270 FVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEE 329
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+K + + + AV+ + G +A F M + YG+ P+ A++ G L
Sbjct: 330 DIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLSGCASVGAL 386
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 320/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN ++ G A+N +AL++ QM + L PD FT+ S+L + + G
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIHG+A+R+GL + IG SL+++Y C + + LF + + +SWN +IAG QN
Sbjct: 330 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 389
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL DE + FRQML I+P ++ + AC+ L+ L LGK+LH ++ +++F++
Sbjct: 390 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 449
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SS++DMYAK G I L++ IFD++ D+ SW +I G +HG +A+ LFE+M + G+K
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F +L ACSHAGL++ YFN M + I P EHY V D+LGRAG++ +A
Sbjct: 510 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 569
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P +W +LLS+CR+H N+ L KVA K+ ++P YV++SN +A + +
Sbjct: 570 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK 629
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D +R M++ G++K CSWIEV K + F+ GD+ P + E + L ++
Sbjct: 630 WDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISS 689
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PDT VLHD+EEE K +L HSE+LAI FG++ T G +R+ KNLR+CGDCH A
Sbjct: 690 IGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNA 749
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+V R+I+VRDN RFHHF DG CSCGDYW
Sbjct: 750 AKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 149/253 (58%), Gaps = 2/253 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN ++ RN L+E+A++I ++ +V KPD+FTL V+ A +D+ G+ I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDS-HRLFCLLPVKDAISWNSIIAGCVQNGL 122
HG A + L ++V +G++LI MY KC VE++ R+F L+ K SWN+++ G QN
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L + QM + + P + S++ AC+ + +LH G+++HG +RNG + FI S
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL +Y CG A+ +FD M+ +VSW +I G + +G +AI+LF QM DG++P
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410
Query: 243 SVAFVAVLTACSH 255
+A + V ACS
Sbjct: 411 EIAIMCVCGACSQ 423
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 13 IVGLARNGLYEEALNIVRQMGN---VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
I L +G +EAL+ +++ + ++ S + +L D+ G+ +H
Sbjct: 74 IKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSA 133
Query: 70 HGLDAN-VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
N + + +I MY+ C DS +F L K+ WN+I++ +N LF++ +
Sbjct: 134 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 193
Query: 129 FFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F +++ + + KP + + ++ ACA L L LG+ +HG + ++F+ ++L+ MY
Sbjct: 194 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY 253
Query: 188 AKCGNIRLA-RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
KCG + A + +FD MD + SW A++ G A + + A+ L+ QM G+ P+
Sbjct: 254 GKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 313
Query: 247 VAVLTACSH 255
++L ACS
Sbjct: 314 GSLLLACSR 322
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 320/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN ++ G A+N +AL++ QM + L PD FT+ S+L + + G
Sbjct: 368 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 427
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIHG+A+R+GL + IG SL+++Y C + + LF + + +SWN +IAG QN
Sbjct: 428 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 487
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL DE + FRQML I+P ++ + AC+ L+ L LGK+LH ++ +++F++
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SS++DMYAK G I L++ IFD++ D+ SW +I G +HG +A+ LFE+M + G+K
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F +L ACSHAGL++ YFN M + I P EHY V D+LGRAG++ +A
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P +W +LLS+CR+H N+ L KVA K+ ++P YV++SN +A + +
Sbjct: 668 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK 727
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D +R M++ G++K CSWIEV K + F+ GD+ P + E + L ++
Sbjct: 728 WDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISS 787
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PDT VLHD+EEE K +L HSE+LAI FG++ T G +R+ KNLR+CGDCH A
Sbjct: 788 IGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNA 847
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+V R+I+VRDN RFHHF DG CSCGDYW
Sbjct: 848 AKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 145/253 (57%), Gaps = 2/253 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG--NVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
++VSWN++I G AR ++++M + +K D FT+ +VLP+ + ++ KE
Sbjct: 269 NIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKE 328
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HGY+ RHGL +N + ++ I Y +C + S R+F L+ K SWN+++ G QN
Sbjct: 329 LHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSD 388
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L + QM + + P + S++ AC+ + +LH G+++HG +RNG + FI S
Sbjct: 389 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 448
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL +Y CG A+ +FD M+ +VSW +I G + +G +AI+LF QM DG++P
Sbjct: 449 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 508
Query: 243 SVAFVAVLTACSH 255
+A + V ACS
Sbjct: 509 EIAIMCVCGACSQ 521
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 141/259 (54%), Gaps = 4/259 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +LVSWN++I G + NG +E+ N R+M G + PD TL +VLP+ A D+
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIE 221
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
KG +HG A++ GL+ + + +SLI+MY+KC + ++ LF K+ +SWNS+I G
Sbjct: 222 KGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYA 281
Query: 119 QNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+ ++M AK+K + +++P C + L K+LHG R+G N
Sbjct: 282 REEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSN 341
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+A++ + Y +CG + + +FD MD + SW A++ G A + + A+ L+ QM
Sbjct: 342 ELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTD 401
Query: 237 DGVKPNSVAFVAVLTACSH 255
G+ P+ ++L ACS
Sbjct: 402 SGLDPDWFTIGSLLLACSR 420
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 146/254 (57%), Gaps = 5/254 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN ++ RN L+E+A++I ++ +V KPD+FTL V+ A +D+ G+ I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG A + L ++V +G++LI MY KC VE++ ++F +P ++ +SWNSII G +NG
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 124 DEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E FR+ML+ + P + +++P CA + G +HG ++ G ++ + + +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+DMY+KC + A+ +FDK D +IVSW ++I G A + L ++M+ + K
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 242 NSVAF--VAVLTAC 253
+ F + VL C
Sbjct: 304 KADEFTILNVLPVC 317
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 101/188 (53%), Gaps = 3/188 (1%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IA 136
+ + +I MY+ C DS +F L K+ WN+I++ +N LF++ + F +++ +
Sbjct: 36 LNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVT 95
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+ KP + + ++ ACA L L LG+ +HG + ++F+ ++L+ MY KCG + A
Sbjct: 96 EHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 155
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFVAVLTACS 254
+F+ M ++VSW ++I G + +G ++ + F +M ++ P+ V VL C+
Sbjct: 156 VKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCA 215
Query: 255 HAGLIDKA 262
I+K
Sbjct: 216 GEEDIEKG 223
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 148 IMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
++ AC + +G++LH + F ++ + + ++ MY+ CG+ +R +FDK+
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 207 DIVSWTAVIMGNALHGNAHDAISLF-EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
++ W A++ + DA+S+F E + KP++ V+ AC AGL+D
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQ 121
Query: 266 F--NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
TK ++ F A +A + G+ G ++EA + +M P N+
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIA-MYGKCGLVEEAVKVFEHM---PERNL 167
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/515 (44%), Positives = 336/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+V +N++ G +R+ +A+++ + N NL PD +T S+L +G
Sbjct: 87 IPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQG 146
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H AI+ GL+ N + +LINMYA C V+ + R+F + +S+N+II G ++
Sbjct: 147 KQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARS 206
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FRQ+ K+KP V+ S++ +CA L L LGK +H + +NG D + +
Sbjct: 207 SRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVN 266
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++ A +F+ M + D +W+A+I+ A+HG D +S+FE+M + V+
Sbjct: 267 TALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQ 326
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH GL+D+ + YF SM++ YGI P +HY + DLLGRAG L EAY+
Sbjct: 327 PDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYK 386
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W TLLS+C H N+ELA +V +I +D ++ G YVILSN A A +
Sbjct: 387 FIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGK 446
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D +LR M +KG K P CS IEV N + F +GD H ++ AL EL++ ++
Sbjct: 447 WEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKS 506
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT V+H D+E+E+K+ L YHSE+LAI FG++ TP GTTIR++KNLRVCGDCH+
Sbjct: 507 VGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHS 566
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS ++ REII+RD RFHHF+DGKCSCGDYW
Sbjct: 567 AAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 144/283 (50%), Gaps = 5/283 (1%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAK---CARVEDSHRLFCL 101
SS+L + + K+I ++I+ L ++ I + LIN + A ++ +H+LF
Sbjct: 27 SSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEA 86
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P D + +NS+ G ++ + + F + L + P +F S++ AC G
Sbjct: 87 IPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQG 146
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
KQLH I+ G ++N ++ +L++MYA C ++ A+ +FD++ +VS+ A+I G A
Sbjct: 147 KQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARS 206
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
++A+SLF Q++ +KPN V ++VL++C+ G +D + + K G+ +
Sbjct: 207 SRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLG-KWIHEYVKKNGLDKYVKV 265
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
A+ D+ + G L A +M T+ W ++ A +H
Sbjct: 266 NTALIDMYAKCGSLDGAISVFESMSVRDTQ-AWSAMIVAYAMH 307
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 324/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DL+SWN +I G AR EA+ + +QM + +KP T +L A+ G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH +R G+ +N + ++L+NMY +C + ++ +F +D ISWNS+IAG Q+
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ K F++M +++P +++F+S++ C + L LGKQ+HG I +G ++ +
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY +CG+++ AR +F + D++SWTA+I G A G AI LF QM+ +G +
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 241 P-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P + F ++L+AC+HAGL+ + + F+SM +YG+ P+ EHY + LLGRA + QEA
Sbjct: 631 PPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAE 690
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I+ M P VW TLL ACR+H N+ LA A ++ N Y++LSN YAAA
Sbjct: 691 TLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAG 750
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D A +R M +G++K P SWIEV N + F+A D+SHP I LK L ME
Sbjct: 751 RWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEME 810
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY PDT+ VLHD+ + ++ L HSERLAI +G+I TP GT IRI KNLR+CGDCHT
Sbjct: 811 EAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHT 870
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFISK+V REII RD++RFH F++GKCSC DYW
Sbjct: 871 ASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 172/317 (54%), Gaps = 2/317 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V +N +I LA++G EA +M + + + T S+L + + GK IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G ++V IG++LI+MYA+C + + LF +P +D ISWN+IIAG +
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ ++QM +KP V+F ++ ACA+ + GK +H I+R+G N +A++L+
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY +CG++ A+ +F+ D++SW ++I G+A HG+ A LF++M+ + ++P+++
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +VL+ C + ++ +T+ G+ A+ ++ R G LQ+A +
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 305 MHAGPTENVWLTLLSAC 321
+ + W ++ C
Sbjct: 593 LQHRDVMS-WTAMIGGC 608
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 183/350 (52%), Gaps = 4/350 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VS+NT++ A+ +E L + QM + + PD T ++L F + +GK IH
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH 252
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ GL++++ +G++L+ M +C V+ + + F + +D + +N++IA Q+G
Sbjct: 253 KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNV 312
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + + +M + ++ SI+ AC+ L GK +H I +G ++ I ++L+
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALI 372
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYA+CG++ AR +F M D++SW A+I G A + +A+ L++QM+ +GVKP V
Sbjct: 373 SMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRV 432
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L+AC+++ + + GI + A+ ++ R G L EA
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
A + W ++++ H + E A K+ +++ ++P+N+ +LS
Sbjct: 492 TQARDVIS-WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SWN++I A+ G ++A + +M N P+ T S+L ++ G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH I+ G + + +SL++MY KC + + ++F + +D +S+N+++ Q
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L F QM I P V++ +++ A + L GK++H + G + ++ +
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ M +CG++ A+ F + D+V + A+I A HG+ +A + +M DGV
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N ++++L ACS + ++ A +S + G + + A+ + R G L +A E
Sbjct: 328 LNRTTYLSILNACSTSKALE-AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 301 FISNM 305
M
Sbjct: 387 LFYTM 391
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 127/242 (52%), Gaps = 1/242 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ K IH + G+ ++ + + LINMY KC V D+H++F +P +D ISWNS+I+
Sbjct: 45 EAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYA 104
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G + + F +M A P +++ SI+ AC L GK++H II+ G+ +
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPR 164
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SLL MY KCG++ AR +F + D+VS+ ++ A + + LF QM +G
Sbjct: 165 VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG 224
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V ++ +L A + ++D+ + +T + G+ A+ + R G + A
Sbjct: 225 ISPDKVTYINLLDAFTTPSMLDEG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283
Query: 299 YE 300
+
Sbjct: 284 KQ 285
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
++ +++ C L K++H ++ G ++F+++ L++MY KC ++ A +F +
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M D++SW ++I A G A LFE+M+ G PN + ++++LTAC ++
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 263 WSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + K Y P ++ ++ + G+ G L A + + +
Sbjct: 148 KKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGI 189
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 335/514 (65%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D++ + +I A++ E+A + ++ ++ P+ ++LSSVL + V + G
Sbjct: 324 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 383
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH +AI+ G ++++ +G++L++ YAKC ++ S ++F L + +SWN+I+ G Q+
Sbjct: 384 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L F +M A++ V++SS++ ACA ++ Q+H I ++ F+++ I
Sbjct: 444 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 503
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D YAKCG IR A +F + DI+SW A+I G ALHG A DA+ LF++M K V+
Sbjct: 504 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVE 563
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + FVA+L+ CS GL++ S F+SM D+GI PS EHY + LLGRAG+L +A +
Sbjct: 564 SNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQ 623
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI ++ + P+ VW LLS+C +HKNV L AEKI I+P + YV+LSN YAAA
Sbjct: 624 FIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 683
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
A LR MRN G++K P SW+E+K + +AF G HP IN L+ L + +
Sbjct: 684 LDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSR 743
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+PD VLHDV++EQK +L+ HSERLA+ +G++ TP G IRI+KNLR C DCHTA
Sbjct: 744 EGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTA 803
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKIV+REIIVRD +RFHHFEDGKCSCGDYW
Sbjct: 804 FTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 140/267 (52%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W ++ + N E A + +M KP+ F L+SVL V+ GK IH
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G AI+ D +G +L++MYAKC ++D+ F ++P D I + +I+ Q+ +
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +++ + + P S SS++ AC ++ L GKQ+H I+ G + ++F+ ++L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D YAKC ++ + IF + + VSW +++G + G +A+S+F +M+ + V
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQV 466
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ +VL AC+ I A S+ K
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEK 493
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 139/262 (53%), Gaps = 4/262 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL--PIFADYVDVI 58
MP ++VS+ T++ A+ G +E A + R++ + + F L+++L I D +
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLA 181
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G +H A + G D N +GS LI+ Y+ C+ V D+ +F + KDA+ W ++++
Sbjct: 182 GG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+N + + F +M ++ KP + +S++ A L ++ LGK +HGC I+ D
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +LLDMYAKCG+I+ AR F+ + D++ + +I A A LF ++ +
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 239 VKPNSVAFVAVLTACSHAGLID 260
V PN + +VL AC++ +D
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLD 381
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG----LD---ANVCIGSSLINMYAKCARV 92
DSF + L D G+ +HG+ +R G LD ANV L+NMY K +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANV-----LLNMYGKLGPL 112
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ RLF +P ++ +S+ +++ Q G F+ FR++ + ++++
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA 172
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ L +H C + G D N F+ S L+D Y+ C + A +F+ + D V WT
Sbjct: 173 IAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWT 232
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
A++ + + +A +F +M G KPN A +VL A
Sbjct: 233 AMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 333/526 (63%), Gaps = 16/526 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W VI G ++ G EALN+ RQM P+ T+ SVL A +G EIH
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431
Query: 65 GYAIRH----------GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNS 112
Y++++ G D ++ + ++LI+MY+KC + + +F +P+ ++ ++W
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+I G Q G ++ LK F +M+ + P + S I+ ACAHL + +GKQ+H ++R
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551
Query: 171 NGFDDN--MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+ ++ F+A+ L+DMY+KCG++ AR +FD M +SWT+++ G +HG +A+
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F++M K G P+ + F+ VL ACSH G++D+ SYF+SM+ DYG+ P EHYA DL
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAY 348
L R+G+L +A+ + +M PT VW+ LLSACRVH NVELA K+ ++ N G+Y
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 731
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
++SN YA A RWKD A +R M+ G+KK P CSW++ + +F GD+SHP +I
Sbjct: 732 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 791
Query: 409 EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRII 468
L+ L++R++ GYVP+T LHDV+EE+K NLL HSE+LA+ +G++ T G IRI
Sbjct: 792 ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRIT 851
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLRVCGDCH+A +ISKIV EI+VRD SRFHHF++G CSCG YW
Sbjct: 852 KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 199/437 (45%), Gaps = 45/437 (10%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S V WN +I + G + A+N+ +M +PD FTL VL + G
Sbjct: 125 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 184
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP---VKDAISWNSIIAGCVQN 120
HG +G ++NV I ++L+ MY++C +E++ +F + + D ISWNSI++ V++
Sbjct: 185 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 244
Query: 121 GLFDEGLKFFRQM-LIAKIKPRH-----VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
L F +M LI KP + +S +I+PAC L + K++HG IRNG
Sbjct: 245 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 304
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+D YAKCG + A +F+ M+ D+VSW A++ G + GN A LF+ M
Sbjct: 305 PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNM 364
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ + + V + AV+ S G +A + F M G P+ +V G
Sbjct: 365 RKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS-GSLPNCVTIISVLSACASLGA 423
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+ E +HA +N LTL + F + ++ Y L +
Sbjct: 424 FSQGTE----IHAYSLKNCLLTL-----------------DNDFGGEDEDLMVYNALIDM 462
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y+ R +K A R + +++ +W + G H Y N+ALK
Sbjct: 463 YSKCRSFKAA---RSIFDDIPLEERNVVTWT-------VMIGG---HAQYGDSNDALKLF 509
Query: 415 LERM-EQEGYVPDTKEV 430
+E + E G P+ +
Sbjct: 510 VEMISEPYGVAPNAYTI 526
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/517 (43%), Positives = 334/517 (64%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++D+VSWN++I +N A +M +PD TL S+ I A D
Sbjct: 377 MFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNS 436
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +HG+ +R G L +V IG+++++MYAK ++ +H++F ++PVKD ISWN++I G Q
Sbjct: 437 RSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ 496
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E ++ ++ M K I P ++ SI+PA AH+ L G ++HG +I+ ++F
Sbjct: 497 NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVF 556
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ L+D+Y KCG + A +F ++ V+W A+I + +HG+A + LF +M +G
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG 616
Query: 239 VKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
VKP+ V FV++L+ACSH+G +++ W + + ++YGI PS +HY + DLLGRAG L+
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWCF--RLMQEYGIKPSLKHYGCMVDLLGRAGYLEM 674
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY+FI +M P ++W LL ACR+H N+EL ++++F +D N+G YV+LSN YA
Sbjct: 675 AYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYAN 734
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+W+ +R R +G+KKTP S IEV K F G++SHP I E L+ L +
Sbjct: 735 VGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAK 794
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M+ GY+PD VL DVEE++K+++L HSERLAI FGII TP + IRI KNLRVCGDC
Sbjct: 795 MKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDC 854
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A KFIS+I QREI+VRD++RFHHF+DG CSCGDYW
Sbjct: 855 HNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 184/364 (50%), Gaps = 17/364 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+P D+ +WN++I NG + EA+ Q+ V+ ++PD +T VL VD
Sbjct: 177 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD--- 233
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++IH +A + G NV + +SLI+MY++ + LF +P +D SWN++I+G +Q
Sbjct: 234 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L +M + IK V+ SI+P C L + +H +I++G + ++F+
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L++MYAK GN+ AR F +M + D+VSW ++I + + A F +M+ +G
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + V++ + + + + S + + + AV D+ + G L A+
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 300 EFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDP-----NNMGAYVILS 352
+ + P ++V W TL++ + LA + E M++ N G +V +
Sbjct: 474 KVFEII---PVKDVISWNTLITG---YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 527
Query: 353 NTYA 356
YA
Sbjct: 528 PAYA 531
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 9/318 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + G ++ I + L+N+YA V S F +P KD +WNS+I+ V N
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 195
Query: 121 GLFDEGLK-FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G F E + F++ +L+++I+P +F ++ AC TL G+++H + GF N+F+
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFV 252
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+ MY++ G +AR +FD M D+ SW A+I G +GNA A+ + ++M +G+
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
K N V V++L C G I A + K +G+ A+ ++ + G L++A
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIK-HGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYAA 357
+ M + W ++++A + + A K+ + P+ + V L++ A
Sbjct: 372 KAFQQMFITDVVS-WNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLL-TLVSLASIVAQ 429
Query: 358 ARRWKDAASLRVFMRNKG 375
+R K++ S+ F+ +G
Sbjct: 430 SRDCKNSRSVHGFIMRRG 447
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
T K LH ++ G ++FI++ L+++YA G++ L+RC FD++ D+ +W ++I
Sbjct: 130 TKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMI 189
Query: 216 MGNALHGNAHDAISLFEQ-MEKDGVKPNSVAFVAVLTACSHAGLID----KAWSYFNSMT 270
+G+ H+AI F Q + ++P+ F VL AC L+D W++
Sbjct: 190 SAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRKIHCWAFKLGFQ 247
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +A S H + G A L + F
Sbjct: 248 WNVFVAASLIHMYSRFGFTGIARSLFDDMPF 278
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/518 (42%), Positives = 333/518 (64%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV+WN++I G + G AL + + M + PD TL S+ A D
Sbjct: 230 MECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSA 289
Query: 61 KEIHGYAIRHGLDAN-VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H Y +R G D + + G+++++MYAK + +E + R+F +PV+D++SWN++I G +Q
Sbjct: 290 KSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQ 349
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL +E ++ + M + +K +F S++PA +HL L G ++H I+ G + +++
Sbjct: 350 NGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVY 409
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+D+YAKCG + A +F+KM W A+I G +HG+ +A++LF +M+++G
Sbjct: 410 VGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEG 469
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP+ V FV++L ACSHAGL+D+ S+F+ M Y I P +HYA +AD+LGRAG+L EA
Sbjct: 470 IKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEA 529
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ FI NM P VW LL ACR+H NVE+ ++ +F +DP N+G YV++SN YA
Sbjct: 530 FNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKV 589
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS--HPFYHRINEALKELLE 416
+W +R +R + ++KTP S IEVK F +G+++ HP + I L+ LL
Sbjct: 590 GKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLA 649
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ GYV D VL DVE+++K+++L HSERLAI FGII TP T + I KNLRVCGD
Sbjct: 650 KIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGD 709
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH A K+IS+I +REIIVRD++RFHHF+DG CSCGD+W
Sbjct: 710 CHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 175/329 (53%), Gaps = 10/329 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ +WN ++ GL RN EA+ + +M + D+ T+SSVLP+ D +
Sbjct: 129 MSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLA 188
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H YA++HGLD + + ++LI++Y K +E++ +F + +D ++WNSII+GC Q
Sbjct: 189 LVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQR 248
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFI 179
G LK F+ M + + P ++ S+ A A K LH ++R G+D D++
Sbjct: 249 GQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIA 308
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
++++DMYAK NI A+ +FD M + D VSW +I G +G A++A+ + M+K +G
Sbjct: 309 GNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEG 368
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+K FV+VL A SH G + + ++++ G+ + DL + GKL EA
Sbjct: 369 LKAIQGTFVSVLPAYSHLGALQQGMR-MHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEA 427
Query: 299 ---YEFISNMHAGPTENVWLTLLSACRVH 324
+E + GP W ++S VH
Sbjct: 428 MLLFEKMPRRSTGP----WNAIISGLGVH 452
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 130/251 (51%), Gaps = 6/251 (2%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNV--NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
NT+I +R L A ++R + + +PD FT S++ ++H A
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLHACA 93
Query: 68 IRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R GL +V SL++ Y + R+ +++++F + +D +WN++++G +N E
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ F +M+ + V+ SS++P C L L +H +++G D +F+ ++L+D+
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y K G + A+C+F M+ D+V+W ++I G G A+ +F+ M GV P+ +
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 247 VAVLTACSHAG 257
V++ +A + G
Sbjct: 274 VSLASAIAQGG 284
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/515 (44%), Positives = 332/515 (64%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D SWN +I G +NG EAL+I +M +K D+ T++SVLP+ A D++ G
Sbjct: 55 MPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSG 114
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y I+HGL+ + + ++LINMYAK + + ++F LL +KD +SWN++I G QN
Sbjct: 115 KLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQN 173
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL E ++ + M +I P ++ SI+PA +H+ L G ++HG +I+N ++F+
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFV 233
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+DMY KCG + A +F ++ + V W A+I +HG+ A+ LF +M+ + V
Sbjct: 234 GTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERV 293
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + FV++L+ACSH+GL+ A FN M ++YGI PS +HY + DL GRAG+L+ A+
Sbjct: 294 KPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAF 353
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI M P + W LL+ACR+H N+EL +E++F +D N+G YV+LSN YA
Sbjct: 354 NFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVG 413
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+ +R R++G++K P S I + NK F G+++HP I L++L +++
Sbjct: 414 KWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIK 473
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD VL DVEE++K+++L HSERLAI +GII T T IRI KNLRVCGDCHT
Sbjct: 474 TIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHT 533
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFIS I +REIIVRD+SRFHHF+ G CSCGDYW
Sbjct: 534 VTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 162/285 (56%), Gaps = 8/285 (2%)
Query: 49 PIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI 108
P+ D++ GK+IH ++ G + +V + +SL++MY++ V D+ +LF +P +D
Sbjct: 2 PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
SWN++I+G QNG E L +M + +K ++ +S++P CA + + GK +H +
Sbjct: 62 SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
I++G + +F++++L++MYAK G++ A+ +F + + D+VSW +I G A +G A +AI
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAI 180
Query: 229 SLFEQMEK-DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
++ ME+ + + PN +V++L A SH G + + + K+ + F + D
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVG-TCLID 239
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
+ G+ GKL +A IS + P +N W ++S VH + E A
Sbjct: 240 MYGKCGKLDDA---ISLFYQVPRKNSVPWNAMISCYGVHGDGEKA 281
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/522 (44%), Positives = 335/522 (64%), Gaps = 9/522 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP D +W+ ++ G R+G E AL + R+M GN + + FT SS L A
Sbjct: 121 MPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGN-DGADNEFTASSALAAAAAARC 179
Query: 57 VIKGKEIHGYAIRHGLDA---NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
G+E+H + +R G+DA + + S+L +MYAKC RV+D+ R+F +PV+DA+SW ++
Sbjct: 180 GRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAM 239
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
+ G EG + F ML + ++P +++ ++ ACA G+Q+HG + ++G
Sbjct: 240 VERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSG 299
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
D+ F S+LL MY+KCG++ A +F+ M D+VSWTAVI G A +G +A+ F+
Sbjct: 300 TGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFD 359
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+ G+KP+ V FV VL+AC+HAGL+DK F+S+ + Y I + +HYA V DLL R+
Sbjct: 360 MFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRS 419
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G+ + A + I NM P + +W +LL CR+HKNV LA + AE +F I+P N YV L+
Sbjct: 420 GQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLA 479
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA+ + + +R M +KG+ K PA SWIEV + + F+ GDKSHP I LK
Sbjct: 480 NIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLK 539
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+L +M +EGYV D + VLHDVE+EQK+ + YHSERLA+ FGII TP+G+ I++ KNLR
Sbjct: 540 KLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLR 599
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+CGDCH AIK IS+IVQR+IIVRD++RFHHF+DG CSC DYW
Sbjct: 600 ICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 75 NVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
++C ++LI+ ++ R + + LF +P +D +W+++++G ++G + L +R+M
Sbjct: 93 DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRM 152
Query: 134 LIAKIKP------RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD---DNMFIASSLL 184
+ +P + SS + A A G++LH ++R G D + + S+L
Sbjct: 153 ---QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALA 209
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNS 243
DMYAKCG + AR +FD+M + D VSWTA++ G + LF M + GV+PN
Sbjct: 210 DMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNE 269
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ VL AC+ + M K G S +A+ + + G + A
Sbjct: 270 FTYAGVLRACAQFAVESFGRQVHGRMAKS-GTGDSCFAESALLRMYSKCGDMGSAVRVFE 328
Query: 304 NMHAGPTENVWLTLLSA 320
M A P W ++S
Sbjct: 329 AM-AKPDLVSWTAVISG 344
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 321/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D ++W T++ G +NGL EAL I R+M + D +T S+L + +G
Sbjct: 232 MTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH Y IR D NV +GS+L++MY+KC ++ + +F + K+ ISW ++I G QN
Sbjct: 292 KQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQN 351
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E ++ F +M I P + S++ +CA+L +L G Q H + +G + ++
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG+I A +FD+M HD VSWTA++ G A G A + I LFE+M GVK
Sbjct: 412 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVK 471
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+ VL+ACS AG ++K SYF+SM KD+GI P +HY + DL R+GKL+EA E
Sbjct: 472 PDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEE 531
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P W TLLSACR+ ++E+ AE + IDP N +YV+L + +AA +
Sbjct: 532 FIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQ 591
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A LR MR++ +KK P CSWI+ KNK + F A D+SHP I E L+ L +M +
Sbjct: 592 WNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLE 651
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY PD VLHDV + K +++ +HSE+LAI FG+I P IRI+KNLRVC DCH A
Sbjct: 652 EGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNA 711
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI R+I+VRD RFH F DG CSCGD+W
Sbjct: 712 TKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 183/338 (54%), Gaps = 34/338 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
M D+VS+N VI G + G + +A+ + + + +++P T+S+++ + D
Sbjct: 98 MTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRA 157
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------ 88
GK+ H +R G AN +GS L++MYAK
Sbjct: 158 LGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLL 217
Query: 89 -CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
C VE++ RLF ++ +D+I+W +++ G QNGL E L+ FR+M I +F S
Sbjct: 218 RCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGS 277
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ AC L+ L GKQ+H IIR +DDN+F+ S+L+DMY+KC +I+LA +F +M +
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKN 337
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
I+SWTA+I+G +G + +A+ +F +M++DG+ P+ +V+++C++ +++ + F+
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEG-AQFH 396
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ G+ A+ L G+ G +++A+ M
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ ++L++ A + D LF + +D +S+N++IAG G + ++ + +L
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 135 IA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK--- 189
A ++P ++ S+++ A + L LGKQ H I+R GF N F+ S L+DMYAK
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 190 ----------------------------CGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
C + AR +F+ M D ++WT ++ G +
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
G +A+ +F +M G+ + F ++LTAC
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/518 (43%), Positives = 334/518 (64%), Gaps = 8/518 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPD-----SFTLSSVLPIFADYVDV 57
V + V+W+ ++ EAL + Q+ + LK D + TL++V+ + A+ D+
Sbjct: 284 VKNEVTWSAMVGAYVVCDFMREALELFCQL--LMLKDDVIVLSAVTLATVIRVCANLTDL 341
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G +H YAI+ G ++ +G++L++MYAKC + + R F + ++DA+S+ +II+G
Sbjct: 342 STGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGY 401
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG +EGL+ F +M ++ I P + +S++PACAHL LH G H I GF +
Sbjct: 402 VQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADT 461
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++L+DMYAKCG I AR +FD+M IVSW +I+ +HG +A+ LF+ M+ +
Sbjct: 462 MICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSE 521
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+KP+ V F+ +++ACSH+GL+ + +FN+MT+D+GI P EHYA + DLL RAG +E
Sbjct: 522 GLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKE 581
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
+ FI M P VW LLSACRV+KNVEL V++KI + P + G +V+LSN Y+A
Sbjct: 582 VHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSA 641
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGD-KSHPFYHRINEALKELLE 416
RW DAA +R + +G +K+P CSWIE+ + F+ G +SHP +I+ L ELL
Sbjct: 642 VGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLV 701
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
M++ GY ++ V DVEEE+K+ +L YHSE+LAI FGI+ I + KNLRVCGD
Sbjct: 702 EMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGD 761
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHTAIKFIS + +R+I VRD SRFHHF+DG C+CGD+W
Sbjct: 762 CHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 143/256 (55%), Gaps = 6/256 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V WN +I A NG YEEA+++ +M + P+ FT VL + + +G+EIH
Sbjct: 83 NVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIH 142
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG-CVQNGLF 123
R L++NV + ++L++ YAKC ++D+ +F + +D ++WNS+I+G + G +
Sbjct: 143 CDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSY 202
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
DE + QM + P + ++PA A + +L GK++HG +R GF ++ + + +
Sbjct: 203 DEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGI 261
Query: 184 LDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQ---MEKDGV 239
LD+Y KC I AR IFD M + + V+W+A++ + +A+ LF Q ++ D +
Sbjct: 262 LDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVI 321
Query: 240 KPNSVAFVAVLTACSH 255
++V V+ C++
Sbjct: 322 VLSAVTLATVIRVCAN 337
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 4/177 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
L+++Y C+ ++ + +F +P K+ + WN +I NG ++E + + +ML I
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P +F ++ AC+ L G+++H I R + N++++++L+D YAKCG + A+ +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAIS-LFEQMEKDGVKPNSVAFVAVLTACSH 255
FDKM D+V+W ++I G +LH ++D ++ L QM+ D V PNS V VL A +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQ 232
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 5/265 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D VS+ +I G +NG EE L + +M + P+ TL+SVLP A + G
Sbjct: 386 MDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYG 445
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
H YAI G A+ I ++LI+MYAKC +++ + ++F + + +SWN++I +
Sbjct: 446 SCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIH 505
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ E L F M +KP V+F ++ AC+H + GK + ++ G M
Sbjct: 506 GIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEH 565
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ ++ G + +KM L D+ W A++ ++ N + ++++K G
Sbjct: 566 YACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLG 625
Query: 239 VKPNSVA-FVAVLTACSHAGLIDKA 262
P S FV + S G D A
Sbjct: 626 --PESTGNFVLLSNMYSAVGRWDDA 648
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 327/532 (61%), Gaps = 19/532 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P L WN +I G A+ G+ EEAL + +M P T+S VLP A
Sbjct: 347 PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGK 406
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HGY ++ G+ N + ++L++MYA+ ++ + R+F ++ +D +SWN++I GCV
Sbjct: 407 EAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQ 466
Query: 121 GLFDEGLKFFRQMLIA----------------KIKPRHVSFSSIMPACAHLTTLHLGKQL 164
G E + +M + + P +++ +++P CA L GK++
Sbjct: 467 GHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEI 526
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
HG +R+ + ++ + S+L+DMYAKCG + +R +FD++ ++++W +IM +HG
Sbjct: 527 HGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLG 586
Query: 225 HDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA 283
+A++LF++M G PN V F+A L ACSH+GL+D+ F+ M +D+G+ P+ + +A
Sbjct: 587 DEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHA 646
Query: 284 AVADLLGRAGKLQEAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDP 342
V D+LGRAG+L EAY I++M G + + W +LL ACR+H+NVEL AE++F ++P
Sbjct: 647 CVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEP 706
Query: 343 NNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHP 402
YV+L N Y+AA W + ++RV MR +G+ K P CSWIE+ + F+AG+ SHP
Sbjct: 707 GEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHP 766
Query: 403 FYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG 462
++ + L ERM +EGY PDT VLHDV+E++K +L YHSE+LAI FG++ P G
Sbjct: 767 ASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPG 826
Query: 463 TTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IR+ KNLRVC DCH A KF+SK+V R+I++RD RFHHF DG CSCGDYW
Sbjct: 827 AAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 23/341 (6%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYV--DVIK 59
+ D VS+N++I L +E AL+ +R M SFTL SVL + D +
Sbjct: 130 LRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRR 189
Query: 60 -GKEIHGYAIRHG-LDANV--CIGSSLINMYAKCARVEDSHRLFCLLPVK------DAIS 109
G+E H +A++ G LD ++L++MYA+ V+D+ LF D ++
Sbjct: 190 LGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVT 249
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
WN++I+ VQ G E ++ M+ ++P V+F+S +PAC+ L L LG+++H ++
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309
Query: 170 RNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHD 226
++ N F+AS+L+DMYA + AR +FD + + W A+I G A G +
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEE 369
Query: 227 AISLFEQMEKD-GVKPNSVAFVAVLTACSHA-GLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
A+ LF +ME + G P+ VL AC+ + G K + G+A + A
Sbjct: 370 ALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGK--EAMHGYVVKRGMAGNRFVQNA 427
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTENV-WLTLLSACRVH 324
+ D+ R G++ A + + P + V W TL++ C V
Sbjct: 428 LMDMYARLGEMDVARRIFAMID--PRDVVSWNTLITGCVVQ 466
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 153/364 (42%), Gaps = 62/364 (17%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHR 97
D F L + A D + +H A+R L + +G++L+ YA+C ++ +
Sbjct: 62 DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121
Query: 98 LFCLL--PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH--VSFS--SIMPA 151
LF ++DA+S+NS+I+ ++ L R ML + RH SF+ S++ A
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDML---AEGRHDVSSFTLVSVLLA 178
Query: 152 CAHLT---TLHLGKQLHGCIIRNGFDD---NMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
C+HL LG++ H ++ GF D F ++LL MYA+ G + A+ +F
Sbjct: 179 CSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAA 238
Query: 206 H------DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
D+V+W +I G +A+ + M GV+P+ V F + L ACS ++
Sbjct: 239 AFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEML 298
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADL-----------------------LG------ 290
+ KD +A + +A+ D+ LG
Sbjct: 299 ALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMI 358
Query: 291 ----RAGKLQEAYEFISNMHA----GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP 342
+AG +EA E S M A P+E +L AC ++ AGK A +++
Sbjct: 359 CGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPAC--ARSEGFAGKEAMHGYVVKR 416
Query: 343 NNMG 346
G
Sbjct: 417 GMAG 420
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P ++++WN +I+ +GL +EA+ + +M P+ T + L + V +
Sbjct: 565 LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624
Query: 60 GKEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAIS-WNSIIAG 116
G E+ HG HG+ + + ++++ + R+++++ + + P + +S W+S++
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684
Query: 117 C 117
C
Sbjct: 685 C 685
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/509 (44%), Positives = 329/509 (64%), Gaps = 1/509 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSWN++I G ++G E A+ I ++M + ++P + T+ L AD D+ +GK +H
Sbjct: 197 VVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHK 256
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ LD++V + +SLI+MY+KC RV+ + +F L K +SWN++I G QNG +E
Sbjct: 257 LVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNE 316
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L F +M IKP + S++PA A L+ K +HG +IR D N+F+ ++L+D
Sbjct: 317 ALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVD 376
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG I AR +FD M+ +++W A+I G HG ++ LF++M+K +KPN +
Sbjct: 377 MYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDIT 436
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ L+ACSH+GL+++ +F SM KDYGI P+ +HY A+ DLLGRAG+L +A++FI M
Sbjct: 437 FLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKM 496
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P V+ +L AC++HKNV+L K A +IF ++P++ G +V+L+N YA A W A
Sbjct: 497 PIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVA 556
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R M G++KTP CS +E+ N+ ++F +G SHP +I L+ L++ + GYVP
Sbjct: 557 KVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVP 616
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
DT + HDVE++ K LL HSE+LAI FG++ T GT I I KNLRVCGDCH A K+IS
Sbjct: 617 DTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYIS 675
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ REIIVRD RFH F+DG CSCGDYW
Sbjct: 676 LVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 148/248 (59%)
Query: 15 GLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDA 74
G A++ + AL+ +M + +++P + + +L + D D+ +GKEIHG I G
Sbjct: 4 GYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSW 63
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ + ++NMYAKC ++ D++ +F +P +D + WN++I+G QNG L +M
Sbjct: 64 NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMS 123
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+P ++ SI+PA A L +G +HG ++R GF+ + ++++L+DMY+KCG++
Sbjct: 124 EEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVS 183
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+AR IFD MD +VSW ++I G G+A A+ +F++M +GV+P +V + L AC+
Sbjct: 184 IARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACA 243
Query: 255 HAGLIDKA 262
G +++
Sbjct: 244 DLGDLERG 251
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 171/307 (55%), Gaps = 1/307 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV WNT+I G A+NG + AL +V +M +PDS T+ S+LP AD + G
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HGY +R G ++ V + ++L++MY+KC V + +F + + +SWNS+I G VQ+
Sbjct: 151 MAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQS 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F++ML ++P +V+ + ACA L L GK +H + + D ++ +
Sbjct: 211 GDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVM 270
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+KC + +A IF + +VSW A+I+G A +G ++A++ F +M+ +K
Sbjct: 271 NSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIK 330
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S V+V+ A + + +A + + + + + A+ D+ + G + A +
Sbjct: 331 PDSFTMVSVIPALAELSIPRQA-KWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 301 FISNMHA 307
M+A
Sbjct: 390 LFDMMNA 396
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/514 (43%), Positives = 335/514 (65%), Gaps = 5/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I + L ++AL + M ++P+ FT SSVL ++
Sbjct: 26 MPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL--- 82
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H I+ GLD++V + S+LI++Y++ +E++ R+F + D + W+SIIAG QN
Sbjct: 83 RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQN 142
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
DE L+ F++M A + + +S++ AC L L LG+Q+H +++ +D ++ +
Sbjct: 143 SDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 200
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMY KCG++ A +F +M D++SW+ +I G A +G + +A+ LFE M+ G+K
Sbjct: 201 NALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIK 260
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V V VL ACSHAGL+++ YF+SM + +GI P EHY + DLLGRAG+L EA +
Sbjct: 261 PNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVD 320
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I+ M P W LL+ACRVH+NV++A A++I +DP + G YV+LSN YA +R
Sbjct: 321 LINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQR 380
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A +R M N+G+KK P CSWIEV + +AF+ GD+SHP IN L +L+ ++
Sbjct: 381 WNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMG 440
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL D+E EQ ++ L YHSE+LAIVFG++ P G TIRI KNLR+CGDCH
Sbjct: 441 VGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLF 500
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ++K+ QR I++RD R+HHF+DG CSCGD+W
Sbjct: 501 TKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LINMY K + D+ +F +P ++ +SW ++I+ L D+ L+F ML ++P
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++SS++ AC L L +QLH CII+ G D ++F+ S+L+D+Y++ G + A +FD
Sbjct: 66 MFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+M D+V W+++I G A + + +A+ LF++M++ G +VL AC+ L++
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ + L++MY K G + A+ +FDKM ++VSWT +I + A+ M ++
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV+PN + +VL AC GL + + G+ +A+ D+ R G+L+
Sbjct: 61 GVRPNMFTYSSVLRACD--GLFN--LRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 298 AYEFISNMHAGPTENVWLTLLS----------ACRVHKNVELAGKVAEK 336
A M G VW ++++ A R+ K ++ AG +A++
Sbjct: 117 ALRVFDEMVTGDLV-VWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQ 164
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/516 (44%), Positives = 328/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + + M N++PD T+ +V+ A + G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y+KC +E + LF LP KD ISWN++I G
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + G +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ + + SW A+I G A+HG A + LF +M K G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F +MT+DY + P EHY + DLLG +G +EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC++H NVEL AE + I+P N G+YV+LSN YA+A
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 646 EKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 705
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 706 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 179/334 (53%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+S+T VL A +G++IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------------- 96
G+ ++ G D ++ + +SLI+MY + R+ED+H
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 97 ---RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+LF +PVKD +SWN++I+G + G + E L+ F+ M+ ++P + +++ ACA
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D+Y+KCG + A +F+++ D++SW
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTK 271
+I G H N + +A+ LF++M + G PN V +++L AC+H G ID W + +
Sbjct: 338 LI-GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+ + ++ D+ + G ++ A++ +++
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD---MYAKCGNIRLARCIFDKM 203
S++ C L +L + +H +I+ G + + S L++ + + A +F +
Sbjct: 38 SLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+++ W + G+AL + A+ L+ M G+ PNS F VL +C+ + +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+ K G + ++ + + G+L++A++ P +V + L+
Sbjct: 155 QIHGHVLK-LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK---SPHRDVVSYTALIKGY 210
Query: 322 RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+E A K+ ++I + D + A + + YA +K+A L
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMI---SGYAETGNYKEALEL 253
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/510 (44%), Positives = 322/510 (63%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++W T++ GL +NGL EAL++ R+M + D +T S+L + +GK+IH
Sbjct: 241 DSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIH 300
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y R + NV +GS+L++MY+KC V + +F + K+ ISW ++I G QNG +
Sbjct: 301 AYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGE 360
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M IKP + S++ +CA+L +L G Q H + +G + ++++L+
Sbjct: 361 EAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALV 420
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A +FD+M HD VSWTA++MG A G A + I LFE+M GVKP+ V
Sbjct: 421 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGV 480
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACS +GL+DK SYF+SM +D+ I P +HY + DL R+G L++A EFI
Sbjct: 481 TFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQ 540
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLSACR+ ++E+ AE + +DP N +YV+L + +A+ W D
Sbjct: 541 MPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDV 600
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR++ +KK P CSWI+ KNK + F A D+SHPF I E L+ L +M +EGY
Sbjct: 601 AKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYK 660
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD VLHDV + +K ++L +HSE+LAI FG+I P IRI+KNLRVC DCH A KFI
Sbjct: 661 PDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFI 720
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R+I+VRD RFH F +G CSCGD+W
Sbjct: 721 SKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 176/340 (51%), Gaps = 38/340 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEA----LNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
+P D VS+N ++ G +R G + A + ++R V +P T+S V+ + + D
Sbjct: 103 LPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGV--RPSRITMSGVVMVASALGD 160
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR------------------- 97
G+++H +R G A GS L++MYAK + D+ R
Sbjct: 161 RALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITG 220
Query: 98 ------------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
LF + +D+I+W +++ G QNGL E L FR+M + +F
Sbjct: 221 LLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTF 280
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SI+ AC L L GKQ+H I R ++DN+F+ S+L+DMY+KC ++RLA +F +M
Sbjct: 281 GSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMW 340
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+I+SWTA+I+G +G +A+ +F +M++DG+KP+ +V+++C++ +++ +
Sbjct: 341 KNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEG-AQ 399
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ + G+ P A+ L G+ G +++A+ M
Sbjct: 400 FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM 439
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ G+SL++ A+ V D RLF LP +DA+S+N+++AG + G + +L
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 135 I--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
A ++P ++ S ++ + L LG+Q+H I+R GF F S L+DMYAK G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 193 IRLARCIFDKMDLHDIV-------------------------------SWTAVIMGNALH 221
I AR +FD+M+ ++V +WT ++ G +
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
G +A+ +F +M +GV + F ++LTAC
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTAC 287
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSW +++G A+ G +E +++ +M + +KPD T VL + V KG
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG 498
Query: 61 KE-IHGYAIRHGL----DANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSII 114
+ H H + D C +I++Y++ ++ + +P DA W +++
Sbjct: 499 RSYFHSMQQDHDIVPLDDHYTC----MIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLL 554
Query: 115 AGCVQNGLFDEG 126
+ C G + G
Sbjct: 555 SACRLRGDMEIG 566
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 332/516 (64%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DLVSWN++I +N AL ++M V ++PD T+ S+ IF D G
Sbjct: 309 MEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIG 368
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +HG+ +R L+ ++ IG++L+NMYAK ++ + +F LP +D ISWN++I G Q
Sbjct: 369 RAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQ 428
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E + + M + I P ++ SI+PA +H+ L G ++HG +I+N ++F
Sbjct: 429 NGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVF 488
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ L+DMY KCG + A +F ++ V W A+I +HG+ A+ LF+ M DG
Sbjct: 489 VATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADG 548
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VK + + FV++L+ACSH+GL+D+A F++M K+Y I P+ +HY + DL GRAG L++A
Sbjct: 549 VKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKA 608
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y +SNM ++W TLL+ACR+H N EL ++++ +D N+G YV+LSN YA
Sbjct: 609 YNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANV 668
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ A +R R++G++KTP S + V + F AG++SHP I E L+ L +M
Sbjct: 669 GKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKM 728
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD VL DVEE++K+ +L HSERLAIVFGII TP + IRI KNLRVCGDCH
Sbjct: 729 KSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCH 788
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+ISKI +REIIVRD++RFHHF+DG CSCGDYW
Sbjct: 789 NATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 193/334 (57%), Gaps = 8/334 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWN +I G +NG EAL ++ +M +K D+ T+SS+LPI A DV+ G
Sbjct: 208 MPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H Y I+HGL+++V + ++LINMY+K R++D+ R+F + V+D +SWNSIIA QN
Sbjct: 268 VLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQN 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
L FF++ML ++P ++ S+ L+ +G+ +HG ++R + ++ I
Sbjct: 328 DDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVI 387
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-G 238
++L++MYAK G+I AR +F+++ D++SW +I G A +G A +AI + ME+
Sbjct: 388 GNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRT 447
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ PN +V++L A SH G + + + K+ F + D+ G+ G+L++A
Sbjct: 448 IVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVA-TCLIDMYGKCGRLEDA 506
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
+S + P E W ++S+ +H + E A
Sbjct: 507 ---MSLFYEIPQETSVPWNAIISSLGIHGHGEKA 537
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 153/246 (62%), Gaps = 4/246 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ SWN+++ R G Y ++++ V ++ +++ ++PD +T P+ + + G+++
Sbjct: 113 NIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFP---PVLKACLSLADGEKM 169
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + ++ G + +V + +SLI++Y++ VE +H++F +PV+D SWN++I+G QNG
Sbjct: 170 HCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNV 229
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+ +M ++K V+ SS++P CA + G +H +I++G + ++F++++L
Sbjct: 230 AEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNAL 289
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++MY+K G ++ A+ +FD M++ D+VSW ++I + + A+ F++M G++P+
Sbjct: 290 INMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDL 349
Query: 244 VAFVAV 249
+ V++
Sbjct: 350 LTVVSL 355
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 137/262 (52%), Gaps = 15/262 (5%)
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
+F ++ K++H + G +V + + L+ +YA + S F + K+ S
Sbjct: 57 VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
WNS+++ V+ G + + + ++L ++ ++P +F ++ AC L G+++H +
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWV 173
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
++ GF+ ++++A+SL+ +Y++ G + +A +F M + D+ SW A+I G +GN +A+
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHA-----GLIDKAWSYFNSMTKDYGIAPSFEHYA 283
+ ++M+ + VK ++V ++L C+ + G++ + + + D ++
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVS------N 287
Query: 284 AVADLLGRAGKLQEAYEFISNM 305
A+ ++ + G+LQ+A M
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGM 309
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/518 (43%), Positives = 323/518 (62%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWN +I G ++G +EEAL +M ++ P+ T+ SVL + G
Sbjct: 219 IPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG 278
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I + G N+ + ++L++MY+KC + + +LF + KD I WN++I G
Sbjct: 279 KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHL 338
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN----GFDDN 176
L++E L F ML + P V+F +++PACA L L LGK +H I +N G +N
Sbjct: 339 SLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNN 398
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + +S++ MYAKCG + +A +F M + SW A+I G A++G+A A+ LFE+M
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMIN 458
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G +P+ + FV VL+AC+ AG ++ YF+SM KDYGI+P +HY + DLL R+GK
Sbjct: 459 EGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFD 518
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA + NM P +W +LL+ACR+H VE VAE++F ++P N GAYV+LSN YA
Sbjct: 519 EAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYA 578
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A RW D A +R + +KGMKK P C+ IE+ + F+ GDK HP I L E+
Sbjct: 579 GAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDR 638
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+E+ G+VPDT EVL+D++EE K+ L HSE+LAI FG+I T G+TIRI+KNLRVC +
Sbjct: 639 LLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRN 698
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K ISKI REII RD +RFHHF+DG CSC D W
Sbjct: 699 CHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 180/363 (49%), Gaps = 35/363 (9%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I + +L++ QM + L P+S T S+ A + K++H +A+
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154
Query: 69 RHGLDANVCIGSSLINMYAKCAR-------------------------------VEDSHR 97
+ L + + +SLI+MY++ V+D+ R
Sbjct: 155 KLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARR 214
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +P KD +SWN++IAG VQ+G F+E L F +M A + P + S++ AC HL +
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS 274
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L LGK + + GF N+ + ++L+DMY+KCG I AR +FD M+ D++ W +I G
Sbjct: 275 LELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-W--SYFNSMTKDYG 274
+A+ LFE M ++ V PN V F+AVL AC+ G +D W +Y + K G
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
+ + ++ + + G ++ A + +M + + W ++S ++ + E A +
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMISGLAMNGHAERALGLF 453
Query: 335 EKI 337
E++
Sbjct: 454 EEM 456
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 36/293 (12%)
Query: 48 LPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--- 104
L + A D+ K+IH I+ GL + S LI A + S+ L +
Sbjct: 29 LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88
Query: 105 -KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ 163
+ WN++I L F QML + + P +F S+ +CA H KQ
Sbjct: 89 PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
LH ++ + + +SL+ MY++ G +R AR +FDK L D VS+TA+I G G+
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208
Query: 224 AHDAISLFEQ-------------------------------MEKDGVKPNSVAFVAVLTA 252
DA LF++ M++ V PN V+VL+A
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
C H ++ + S +D G + + A+ D+ + G++ A + M
Sbjct: 269 CGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM 320
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/523 (44%), Positives = 330/523 (63%), Gaps = 14/523 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W+ I G A+ GL EAL + RQM + +KP+ TL SVL A ++ GKEIH
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 65 GYAIRHGLD--------ANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAISWNSII 114
YAI++ +D N+ I + LI+MYAKC +V+ + +F L K D ++W +I
Sbjct: 389 CYAIKYPMDLRKNGHGDENMVI-NQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMI 447
Query: 115 AGCVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
G Q+G ++ L+ +M + +P + S + ACA L L +GKQ+H +RN
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQ 507
Query: 173 FDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ +F+++ L+DMYAKCG+I AR +FD M + V+WT+++ G +HG +A+ +F
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
E+M + G K + V + VL ACSH+G+ID+ YFN M D+G++P EHYA + DLLGR
Sbjct: 568 EEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGR 627
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG+L A I M P VW+ LLS CR+H VEL A+KI + NN G+Y +L
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLL 687
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN YA A RWKD +R MR+KG+KK P CSW+E F GDK+HP I + L
Sbjct: 688 SNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
+ ++R++ GYVP+T LHDV++E+K +LL+ HSE+LA+ +GI+ TP G IRI KNL
Sbjct: 748 SDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNL 807
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVCGDCHTA ++S+I+ EII+RD+SRFHHF++G CSC YW
Sbjct: 808 RVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 189/385 (49%), Gaps = 50/385 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIK 59
MPV D+VSWN++I A+ G + AL + +M N +PD TL +VLP A
Sbjct: 188 MPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL 247
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+ HG+A+ + N+ +G+ L++MYAK +++++ +F +PVKD +SWN+++AG Q
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQ 307
Query: 120 NGLFDEGLKFF-----------------------------------RQMLIAKIKPRHVS 144
G F++ ++ F RQML + IKP V+
Sbjct: 308 IGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 145 FSSIMPACAHLTTLHLGKQLHGCII-------RNGFDDNMFIASSLLDMYAKCGNIRLAR 197
S++ CA + L GK++H I +NG D + + L+DMYAKC + +AR
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIAR 427
Query: 198 CIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQM-EKD-GVKPNSVAFVAVLTAC 253
+FD + D+V+WT +I G + HG+A+ A+ L +M E+D +PN+ L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 254 -SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
S A L + ++ P F + D+ + G + +A NM E
Sbjct: 488 ASLAALSIGKQIHAYALRNQQNAVPLFVSNCLI-DMYAKCGDIGDARLVFDNMME-KNEV 545
Query: 313 VWLTLLSACRVHKNVELAGKVAEKI 337
W +L++ +H E A + E++
Sbjct: 546 TWTSLMTGYGMHGYGEEALGIFEEM 570
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 152/302 (50%), Gaps = 4/302 (1%)
Query: 2 PVSD--LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
P SD + WN++I NG + L+ M +++ PD++T V + V
Sbjct: 86 PPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G H + G +NV +G++L+ MY++C + D+ ++F +PV D +SWNSII +
Sbjct: 146 GDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAK 205
Query: 120 NGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G L+ F +M +P ++ +++P CA + T LGKQ HG + + NMF
Sbjct: 206 LGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMF 265
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+DMYAK G + A +F M + D+VSW A++ G + G DA+ LFEQM+++
Sbjct: 266 VGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEK 325
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+K + V + A ++ + GL +A M GI P+ +V G L
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHG 384
Query: 299 YE 300
E
Sbjct: 385 KE 386
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/517 (42%), Positives = 333/517 (64%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV++N +I G + NG+ ++N+ ++ + L P+S TL +++P+ + + +
Sbjct: 273 MEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLA 332
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG+ ++ G AN + +++ ++ + +E + + F +P K SWN++I+G QN
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL + + F QM+ ++P ++ SS + ACA L L LGK LH I + N+++
Sbjct: 393 GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+I AR IF+ MD ++VSW A+I G LHG +A+ L++ M +
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P S F++VL ACSH GL+++ W F SMT DY I P EH + DLLGRAG+L+EA+E
Sbjct: 513 PTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFE 572
Query: 301 FISNMH---AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
IS GP VW LL AC VHK+ +LA ++K+F +DP N G YV+LSN + +
Sbjct: 573 LISEFPKSAVGP--GVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTS 630
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+++ +AA +R +++ + KTP + IE+ NK + F+AGD++HP I L++L +
Sbjct: 631 KKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAK 690
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M + GY P+T+ L+DVEEE+K++++ HSE+LAI FG++ T GT IRIIKNLRVC DC
Sbjct: 691 MIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDC 750
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A KFISK+ QR I+VRD SRFHHF DG CSCGDYW
Sbjct: 751 HNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 165/305 (54%), Gaps = 4/305 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V WNT++ GL+ + E + R + + +++PD+ TL+SVLP A+ DV G
Sbjct: 175 VPSPDTVLWNTLLAGLSGS---EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMG 231
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +A + GL + + + LI++Y+KC VE + LF ++ D +++N++I+G N
Sbjct: 232 RCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVN 291
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+ + F +++ + P + +++P + L + LHG ++++GF N ++
Sbjct: 292 GMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVS 351
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++ ++ + ++ AR FD M + SW A+I G A +G A++LFEQM K V+
Sbjct: 352 TAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVR 411
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + + L+AC+ G + + + + + + P+ A+ D+ + G + EA
Sbjct: 412 PNPITISSTLSACAQLGALSLG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARR 470
Query: 301 FISNM 305
+ M
Sbjct: 471 IFNTM 475
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 106/181 (58%), Gaps = 5/181 (2%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-A 136
+ S+L +Y +RV+ + ++F +P D + WN+++AG + E ++ F +M+
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDG 206
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
++P + +S++PA A + + +G+ +H + G ++ + + L+ +Y+KCG++ A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
RC+FD M+ D+V++ A+I G +++G +++LF ++ G+ PNS VA++ S
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326
Query: 257 G 257
G
Sbjct: 327 G 327
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 338/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I G A NG YE++ ++ +++ + +F +++L + A +++ G
Sbjct: 305 MPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMG 364
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H A+ + V +G++L++MYAKC + ED++R+F L ++++ W +II+ VQ
Sbjct: 365 RQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQK 424
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E LK F++M + +F+S + A A+L ++ LGKQLH +IR G ++F
Sbjct: 425 GFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSG 484
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYA CG+++ A +F +M +IV W A+I + +G+A S F M + G+
Sbjct: 485 SVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLY 544
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+F++VLTACSH GL++KA YFNSMT+ Y + P +HYA + D+L R+G+ EA
Sbjct: 545 PDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAEN 604
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP-NNMGAYVILSNTYAAAR 359
IS M P E +W ++L++CR+HKN +LA K A+++F +D + AYV +SN YA A
Sbjct: 605 LISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAG 664
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++AA ++ MR +G+KK A SW+E+ ++ + F A D++HP +I + L+E M+
Sbjct: 665 KWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMD 724
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY PDT L +V+EE K L YHSERLAI F +I TP+G+ I I+KNLR C DCH
Sbjct: 725 KEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHA 784
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV REI VRD+SRFHHF DG CSCGDYW
Sbjct: 785 AIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 165/330 (50%), Gaps = 6/330 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I G + G EEAL + QM N++ +P FT +++L + DVI G
Sbjct: 204 MPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFG 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG AI+ ++ + ++L++ Y+K ++ + LF +P D +S+N II G N
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +++ F+++ ++ F++++ A L +G+Q H + + +
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVG 383
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKC A IF + + V WTA+I G +A+ +F++M ++ V
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVH 443
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ F + L A ++ + +S+ + G+ S + + D+ G +++A E
Sbjct: 444 GDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCGSMKDAIE 502
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVE 328
M P N+ W L+SA + + E
Sbjct: 503 VFKEM---PDRNIVCWNALISAYSQNGDAE 529
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 137/248 (55%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW +I G ++N +EA N+ +M +KPD T +++L F D + + +IH +
Sbjct: 109 VSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSH 168
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
IR G A++ + +SL++ Y K ++ + +LF +P KD++S+N +I G + G +E
Sbjct: 169 IIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEA 228
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
LK F QM +P +F++++ + G+Q+HG I+ + ++F+A++LLD
Sbjct: 229 LKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDF 288
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+K I LA+ +FD+M D VS+ +I G A +G + LF++++ + F
Sbjct: 289 YSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPF 348
Query: 247 VAVLTACS 254
+L+ +
Sbjct: 349 ATMLSVAA 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINM----YAKCARVEDSHRLFCLLPVKDAISWN 111
D+++ +I R D +S +NM Y K + + LF + ++ +SW
Sbjct: 55 DLVRANQIA--KARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWT 112
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I G QN E + +M + +KP H++F++++ TTL Q+H IIR
Sbjct: 113 IMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRF 172
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
GF ++ + +SL+D Y K + +A +F +M D VS+ +I G +G +A+ LF
Sbjct: 173 GFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLF 232
Query: 232 EQMEKDGVKPNSVAFVAVL 250
QM +P+ F A+L
Sbjct: 233 MQMRNMDFQPSGFTFAAML 251
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 170 RNGFDDNMFIASSLLDM----YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
R FD+ + +S ++M Y K N+ AR +F+ M + VSWT +I G + +
Sbjct: 66 RQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPK 125
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A +L+ +M + GVKP+ + F +L+ + + + + + +G + S + ++
Sbjct: 126 EAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIR-FGFSASLIVFNSL 184
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTEN 312
D + L A + S M PT++
Sbjct: 185 VDSYCKTCCLDIASQLFSEM---PTKD 208
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 326/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+VSWN +I G A G +EAL + ++M N++PD T+ SV+ A + G
Sbjct: 180 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELG 239
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y KC VE + LF L KD ISWN++I G
Sbjct: 240 RQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM 299
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + G +
Sbjct: 300 NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASS 359
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+SL+DMYAKCG+I A+ +FD + + SW A+I G A+HG A+ A +F +M K+
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 419
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SM +DY I P EHY + DLLG +G +EA
Sbjct: 420 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC++H NVEL A+ + I+P N G+YV+LSN YA A
Sbjct: 480 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A +R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 540 GRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 599
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 600 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 659
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 660 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 176/334 (52%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+ +T +L A +G++IH
Sbjct: 52 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIH 111
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVED--------SHR------------------- 97
G+ ++ G D ++ + +SLI+MY + R+ED SHR
Sbjct: 112 GHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIA 171
Query: 98 ----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F +P+KD +SWN++I+G + G E L+ F++M+ ++P + S++ ACA
Sbjct: 172 SAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 231
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D+Y KCG + A +F+ + D++SW
Sbjct: 232 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNT 291
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTK 271
+I G H N + +A+ LF++M + G PN V +++L AC+H G I+ W + +
Sbjct: 292 LI-GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 350
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+A + H ++ D+ + G ++ A + ++
Sbjct: 351 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 384
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/510 (44%), Positives = 331/510 (64%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++ W+ +I A+ E+A + +M ++ P+ F+LSSVL A+ + GK+IH
Sbjct: 697 DVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIH 756
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+AI+ G ++ + +G++LI++YAKC+ +E S +F L + +SWN+II G ++G +
Sbjct: 757 NHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGE 816
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M A + V++SS++ ACA +++ Q+H I ++ F+ + +++SL+
Sbjct: 817 AALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLI 876
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D YAKCG IR AR IF+ + D+VSW A+I G A+HG A A LF+ M K+ +K N +
Sbjct: 877 DSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDI 936
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FVA+L+ C GL+ + S F+SM D+GI PS EHY + LLGRAG+L +A FI +
Sbjct: 937 TFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGD 996
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ + P+ VW LLS+C VHKNVEL AEK+ I+P + YV+LSN Y+AA
Sbjct: 997 IPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQV 1056
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A R MRN G++K P SW+E+K + +AF G + HP IN L+ L + +EGYV
Sbjct: 1057 AFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYV 1116
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT EVLHD+EEEQK +L+ HSERLA+ +G++ TP G IRI+KNLR C DCH K I
Sbjct: 1117 PDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVI 1176
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV++EIIVRD +RFHHFE+G CSCGDYW
Sbjct: 1177 SKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 159/307 (51%), Gaps = 5/307 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VS+ T++ G A G +EEA + +++ + + F L++VL + +
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H A + G D N +GS+LI+ Y+ C V D+ R+F + KDA++W ++++ +N
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN 610
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L+ F +M +A K + +S++ A L+++ LGK +H C ++ +D +
Sbjct: 611 DCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVY 670
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LLDMYAKCGNI AR F+ + D++ W+ +I A A LF +M + V
Sbjct: 671 GALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVS 730
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA--AVADLLGRAGKLQEA 298
PN + +VL AC++ L+D N K I E + A+ DL + ++ +
Sbjct: 731 PNEFSLSSVLQACANMPLLDLGKQIHNHAIK---IGHESELFVGNALIDLYAKCSDMESS 787
Query: 299 YEFISNM 305
E S++
Sbjct: 788 LEIFSSL 794
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 12/276 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V+W ++ + N E L I +M K + F L+SVL V+ GK IH
Sbjct: 596 DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH 655
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ D + +L++MYAKC +ED+ F ++ D I W+ +I+ Q +
Sbjct: 656 ACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNE 715
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M+ + + P S SS++ ACA++ L LGKQ+H I+ G + +F+ ++L+
Sbjct: 716 QAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALI 775
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKC ++ + IF + + VSW +I+G + G A+S+F +M V V
Sbjct: 776 DLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQV 835
Query: 245 AFVAVLTACS------HAG----LIDKAWSYFNSMT 270
+ +VL AC+ H G LI+K S FNS T
Sbjct: 836 TYSSVLRACASTASINHVGQVHCLIEK--STFNSDT 869
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 12/273 (4%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCI--GSSLINMYAKCARVEDSHR 97
DS+ + +L D G+ +HG+ +R G A + + + L+NMY K +HR
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F LP ++ +S+ +++ G G F+E F+++ + ++++ + T
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L L +H C + G D N F+ S+L+D Y+ CG + AR +FD + D V+WTA++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA--CSHAGLIDKAWSYFNSMTKDYGI 275
+ + + + +F +M K N A +VL A C + ++ K + T +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKT----L 662
Query: 276 APSFEH-YAAVADLLGRAGKLQE---AYEFISN 304
+ H Y A+ D+ + G +++ A+E ++N
Sbjct: 663 YDTERHVYGALLDMYAKCGNIEDARLAFEMVTN 695
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 320/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSW+ +I G +NG YE R++ KPD+F+L V+ D + +I G
Sbjct: 61 MEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMG 120
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH +++GL + + S+L++MYAKC ++++ +LF +P KD ++ +IAG +
Sbjct: 121 RLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAEC 180
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E F QM P V+ +I+ ACA L ++ + +H + + ++ +
Sbjct: 181 GKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELG 240
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMYAKCG+I +R IFD+M+ +++SW+A+I HG +A+ LF M G+
Sbjct: 241 TAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGII 300
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+++L ACSHAGL+D F+ M+ YG+ P +HY + DLLGRAG+L +A
Sbjct: 301 PNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALR 360
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM E +W L ACR+H+ V+LA K A+ + + N G Y++LSN YA A R
Sbjct: 361 LIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGR 420
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD A +R M + +KK P +WIEV N Y F AGD SH + I E LK L +++E
Sbjct: 421 WKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLES 480
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VLHDV+EE K +L+ HSE+LAI FG+I TPDGT IRI KNLRVCGDCH+
Sbjct: 481 AGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSF 540
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S I QR+IIVRD +RFHHF++G CSCGDYW
Sbjct: 541 CKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 18/289 (6%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
++ + K++H G+ ++ + + L+ M AK + +H LF + +D +SW+ +I
Sbjct: 15 NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIG 74
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V+NG ++ + FR+++ A KP + S ++ AC L +G+ +H +++NG
Sbjct: 75 GFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHL 134
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ F+ S+L+DMYAKCG I A+ +FD+M D+V+ T +I G A G +++ LF+QM
Sbjct: 135 DNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMR 194
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF----EHYAAVADLLGR 291
+DG P+ VA V ++ AC+ G ++KA + DY A + E A+ D+ +
Sbjct: 195 RDGFVPDKVAMVTIVNACAKLGAMNKA-----RLVHDYVCARRYSLDVELGTAMIDMYAK 249
Query: 292 AGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
G + + E M +NV W ++ A H G+ A ++F
Sbjct: 250 CGSIDSSREIFDRME---QKNVISWSAMIGAYGYHGQ----GREALELF 291
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/515 (42%), Positives = 339/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYE-EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +++SW +I A++G + EA+ + +M + +++P+ F+ SSVL + D
Sbjct: 120 MPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 179
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++++ YA++ G+ + C+G+SLI+MYA+ R+ED+ + F +L K+ +S+N+I+ G +
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N +E F ++ I +F+S++ A + + G+Q+HG +++ G+ N I
Sbjct: 240 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 299
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY++CGNI A +F++M+ +++SWT++I G A HG A A+ +F +M + G
Sbjct: 300 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 359
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + +VAVL+ACSH G+I + +FNSM K++GI P EHYA + DLLGR+G L EA
Sbjct: 360 KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 419
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI++M VW TLL ACRVH N EL AE I +P++ AY++LSN +A+A
Sbjct: 420 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 479
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+WKD +R M+ + + K CSWIEV+N+ + F G+ SHP +I + L +L +++
Sbjct: 480 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 539
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+PDT VLHD+EEEQK+ L+ HSE++A+ FG+I T IRI KNLRVCGDCHT
Sbjct: 540 EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHT 599
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+IS REI+VRD++RFHH ++G CSC DYW
Sbjct: 600 AIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 185/360 (51%), Gaps = 12/360 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W +I A+ G +A+++ M PD FT SSVL + + G
Sbjct: 16 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 75
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA---RVEDSHRLFCLLPVKDAISWNSIIAGC 117
K++H IR GL +VC+G SL++MYAKCA V+DS ++F +P + +SW +II
Sbjct: 76 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 135
Query: 118 VQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+G D E ++ F +M+ I+P H SFSS++ AC +L+ + G+Q++ ++ G
Sbjct: 136 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 195
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +SL+ MYA+ G + AR FD + ++VS+ A++ G A + + +A LF ++
Sbjct: 196 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 255
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ ++ F ++L+ + G + K + K G + A+ + R G ++
Sbjct: 256 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIE 314
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
A++ + M NV W ++++ H A ++ K+ PN + +LS
Sbjct: 315 AAFQVFNEME---DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
++++F +P ++ ++W +I Q G + + F M ++ P ++SS++ AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC---GNIRLARCIFDKMDLHDIVSW 211
L L LGKQLH +IR G ++ + SL+DMYAKC G++ +R +F++M H+++SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 212 TAVIMGNALHGNA-HDAISLFEQMEKDGVKPNSVAFVAVLTAC---SHAGLIDKAWSYFN 267
TA+I A G +AI LF +M ++PN +F +VL AC S ++ +SY
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ GIA ++ + R+G++++A
Sbjct: 189 KL----GIASVNCVGNSLISMYARSGRMEDA 215
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 333/526 (63%), Gaps = 16/526 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W VI G ++ G EALN+ RQM P+ T+ SVL A +G EIH
Sbjct: 220 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279
Query: 65 GYAIRH----------GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNS 112
Y++++ G D ++ + ++LI+MY+KC + + +F +P+ ++ ++W
Sbjct: 280 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 339
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+I G Q G ++ LK F +M+ + P + S I+ ACAHL + +GKQ+H ++R
Sbjct: 340 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 399
Query: 171 NGFDDN--MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+ D+ F+A+ L++MY+KCG++ AR +FD M +SWT+++ G +HG +A+
Sbjct: 400 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 459
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F++M K G P+ + F+ VL ACSH G++D+ SYF+SM+ DYG+ P EHYA DL
Sbjct: 460 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 519
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAY 348
L R G+L +A++ + +M PT VW+ LLSACRVH NVELA K+ ++ N G+Y
Sbjct: 520 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 579
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
++SN YA A RWKD A +R M+ G+KK P CSW++ + +F GD+SHP +I
Sbjct: 580 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 639
Query: 409 EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRII 468
L+ L++R++ GYVP+T LHDV+EE+K NLL HSE+LA+ +G++ T G IRI
Sbjct: 640 ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRIT 699
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLRVCGDCH+A +ISKIV EI+VRD SRFHHF++G CSCG YW
Sbjct: 700 KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 163/312 (52%), Gaps = 55/312 (17%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV------NLKPDSFTLSSVLPIFADYVD 56
+ D++SWN+++ ++ AL++ +M + N + D ++ ++LP
Sbjct: 76 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 135
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
V + KE+HG AIR+G +V +G++LI+ YAKC +E++ ++F ++ KD +SWN+++AG
Sbjct: 136 VPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 195
Query: 117 CVQNGLFD-----------------------------------EGLKFFRQMLIAKIKPR 141
Q+G F E L FRQM+ + P
Sbjct: 196 YSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPN 255
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRN----------GFDDNMFIASSLLDMYAKCG 191
V+ S++ ACA L G ++H ++N G D+++ + ++L+DMY+KC
Sbjct: 256 CVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 315
Query: 192 NIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFV 247
+ + AR IFD + L + +V+WT +I G+A +G+++DA+ LF +M E GV PN+
Sbjct: 316 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 375
Query: 248 AVLTACSHAGLI 259
+L AC+H I
Sbjct: 376 CILMACAHLAAI 387
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 182/401 (45%), Gaps = 45/401 (11%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D FTL VL + G HG +G ++NV I ++L+ MY++C +E++ +F
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 100 CLLP---VKDAISWNSIIAGCVQNGLFDEGLKFFRQM-LIAKIKPRH-----VSFSSIMP 150
+ + D ISWNSI++ V++ L F +M LI KP + +S +I+P
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
AC L + K++HG IRNG ++F+ ++L+D YAKCG + A +F+ M+ D+VS
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 188
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W A++ G + GN A LF+ M K+ + + V + AV+ S G +A + F M
Sbjct: 189 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 248
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
G P+ +V G + E +HA +N LTL
Sbjct: 249 FS-GSLPNCVTIISVLSACASLGAFSQGME----IHAYSLKNCLLTL------------- 290
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
+ F + ++ Y L + Y+ R +K A R + +++ +W
Sbjct: 291 ----DNDFGGEDEDLMVYNALIDMYSKCRSFKAA---RSIFDDIPLEERNVVTWT----- 338
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERM-EQEGYVPDTKEV 430
+ G H Y N+ALK +E + E G P+ +
Sbjct: 339 --VMIGG---HAQYGDSNDALKLFVEMISEPYGVAPNAYTI 374
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML A + H + ++ AC L + G HG I NGF+ N+FI ++L+ MY++CG+
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 193 IRLARCIFDKMD---LHDIVSWTAVIMGNALHGNAHDAISLFEQM------EKDGVKPNS 243
+ A IFD++ + D++SW +++ + NA A+ LF +M + + +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 244 VAFVAVLTAC 253
++ V +L AC
Sbjct: 121 ISIVNILPAC 130
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 334/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D++ + +I A++ E+A + ++ ++ P+ ++LSSVL + V + G
Sbjct: 305 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 364
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH +AI+ G ++++ +G++L++ YAKC ++ S ++F L + +SWN+I+ G Q+
Sbjct: 365 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 424
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L F +M A++ V++SS++ ACA ++ Q+H I ++ F+++ I
Sbjct: 425 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 484
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D YAKCG IR A +F + DI+SW A+I G ALHG A DA+ LF++M K V+
Sbjct: 485 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVE 544
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + FVA+L+ C GL++ S F+SM D+GI PS EHY + LLGRAG+L +A +
Sbjct: 545 SNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQ 604
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI ++ + P+ VW LLS+C +HKNV L AEKI I+P + YV+LSN YAAA
Sbjct: 605 FIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 664
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
A LR MRN G++K P SW+E+K + +AF G HP IN L+ L + +
Sbjct: 665 LDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSR 724
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+PD VLHDV++EQK +L+ HSERLA+ +G++ TP G IRI+KNLR C DCHTA
Sbjct: 725 EGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTA 784
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKIV+REIIVRD +RFHHFEDGKCSCGDYW
Sbjct: 785 FTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 116/211 (54%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHG AI+ D +G +L++MYAKC ++D+ F ++P D I + +I+ Q+
Sbjct: 264 QGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQS 323
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + F +++ + + P S SS++ AC ++ L GKQ+H I+ G + ++F+
Sbjct: 324 NQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVG 383
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D YAKC ++ + IF + + VSW +++G + G +A+S+F +M+ +
Sbjct: 384 NALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMP 443
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
V + +VL AC+ I A S+ K
Sbjct: 444 CTQVTYSSVLRACASTASIRHAGQIHCSIEK 474
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 178/408 (43%), Gaps = 63/408 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL--PIFADYVDVI 58
MP ++VS+ T++ A+ G +E A + R++ + + F L+++L I D +
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLA 181
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G +H A + G D N +GS LI+ Y+ C+ V D+ +F + KDA+ W ++++
Sbjct: 182 GG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+N + + + S S + +CA + +HGC I+ D
Sbjct: 240 ENDCPENAFRCAQ------------SCSLLAISCAR-------QGIHGCAIKTLNDTEPH 280
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +LLDMYAKCG+I+ AR F+ + D++ + +I A A LF ++ +
Sbjct: 281 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 340
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-----DYGIAPSF-EHYAAVADL---- 288
V PN + +VL AC++ +D N K D + + + YA D+
Sbjct: 341 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 400
Query: 289 --------------------LGRAGKLQEAYEFISNMHAGP---TENVWLTLLSACRVHK 325
++G +EA M A T+ + ++L AC
Sbjct: 401 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 460
Query: 326 NVELAGKVAEKIFMIDPNN---MGAYVILSNTYAAARRWKDAASLRVF 370
++ AG++ I NN +G +I +TYA +DA L+VF
Sbjct: 461 SIRHAGQIHCSIEKSTFNNDTVIGNSLI--DTYAKCGYIRDA--LKVF 504
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG----LD---ANVCIGSSLINMYAKCARV 92
DSF + L D G+ +HG+ +R G LD ANV L+NMY K +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANV-----LLNMYGKLGPL 112
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ RLF +P ++ +S+ +++ Q G F+ FR++ + ++++
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA 172
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ L +H C + G D N F+ S L+D Y+ C + A +F+ + D V WT
Sbjct: 173 IAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWT 232
Query: 213 AVI 215
A++
Sbjct: 233 AMV 235
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 161 GKQLHGCIIRNGFDD--NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G+ +HG ++R G ++F A+ LL+MY K G + AR +FD+M ++VS+ ++ +
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
A G+ A +LF ++ +G + N +L
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTML 169
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 333/526 (63%), Gaps = 16/526 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W VI G ++ G EALN+ RQM P+ T+ SVL A +G EIH
Sbjct: 327 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 386
Query: 65 GYAIRH----------GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNS 112
Y++++ G D ++ + ++LI+MY+KC + + +F +P+ ++ ++W
Sbjct: 387 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 446
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+I G Q G ++ LK F +M+ + P + S I+ ACAHL + +GKQ+H ++R
Sbjct: 447 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 506
Query: 171 NGFDDN--MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+ D+ F+A+ L++MY+KCG++ AR +FD M +SWT+++ G +HG +A+
Sbjct: 507 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 566
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F++M K G P+ + F+ VL ACSH G++D+ SYF+SM+ DYG+ P EHYA DL
Sbjct: 567 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 626
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAY 348
L R G+L +A++ + +M PT VW+ LLSACRVH NVELA K+ ++ N G+Y
Sbjct: 627 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 686
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
++SN YA A RWKD A +R M+ G+KK P CSW++ + +F GD+SHP +I
Sbjct: 687 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 746
Query: 409 EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRII 468
L+ L++R++ GYVP+T LHDV+EE+K NLL HSE+LA+ +G++ T G IRI
Sbjct: 747 ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRIT 806
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLRVCGDCH+A +ISKIV EI+VRD SRFHHF++G CSCG YW
Sbjct: 807 KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 198/437 (45%), Gaps = 45/437 (10%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S V WN +I + G + A+N+ +M + D FTL VL + G
Sbjct: 80 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAF 139
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP---VKDAISWNSIIAGCVQN 120
HG +G ++NV I ++L+ MY++C +E++ +F + + D ISWNSI++ V++
Sbjct: 140 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 199
Query: 121 GLFDEGLKFFRQM-LIAKIKPRH-----VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
L F +M LI KP + +S +I+PAC L + K++HG IRNG
Sbjct: 200 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 259
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+D YAKCG + A +F+ M+ D+VSW A++ G + GN A LF+ M
Sbjct: 260 LDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNM 319
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ + + V + AV+ S G +A + F M G P+ +V G
Sbjct: 320 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS-GSLPNCVTIISVLSACASLGA 378
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+ E +HA +N LTL + F + ++ Y L +
Sbjct: 379 FSQGME----IHAYSLKNCLLTL-----------------DNDFGGEDEDLMVYNALIDM 417
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y+ R +K A R + +++ +W + G H Y N+ALK
Sbjct: 418 YSKCRSFKAA---RSIFDDIPLEERNVVTWT-------VMIGG---HAQYGDSNDALKLF 464
Query: 415 LERM-EQEGYVPDTKEV 430
+E + E G P+ +
Sbjct: 465 VEMISEPYGVAPNAYTI 481
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/515 (42%), Positives = 339/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +++SW +I A++G +EA+ + +M + +++P+ F+ SSVL + D
Sbjct: 115 MPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 174
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++++ YA++ G+ + C+G+SLI+MYA+ R+ED+ + F +L K+ +S+N+I+ G +
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N +E F ++ I +F+S++ A + + G+Q+HG +++ G+ N I
Sbjct: 235 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 294
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY++CGNI A +F++M+ +++SWT++I G A HG A A+ +F +M + G
Sbjct: 295 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 354
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + +VAVL+ACSH G+I + +FNSM K++GI P EHYA + DLLGR+G L EA
Sbjct: 355 KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 414
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI++M VW TLL ACRVH N EL AE I +P++ AY++LSN +A+A
Sbjct: 415 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 474
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+WKD +R M+ + + K CSWIEV+N+ + F G+ SHP +I + L +L +++
Sbjct: 475 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 534
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+PDT VLHD+EEEQK+ L+ HSE++A+ FG+I T IRI KNLRVCGDCHT
Sbjct: 535 EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHT 594
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+IS REI+VRD++RFHH ++G CSC DYW
Sbjct: 595 AIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 185/360 (51%), Gaps = 12/360 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W +I A+ G +A+++ M PD FT SSVL + + G
Sbjct: 11 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 70
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA---RVEDSHRLFCLLPVKDAISWNSIIAGC 117
K++H IR GL +VC+G SL++MYAKCA V+DS ++F +P + +SW +II
Sbjct: 71 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 130
Query: 118 VQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+G D E ++ F +M+ I+P H SFSS++ AC +L+ + G+Q++ ++ G
Sbjct: 131 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 190
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +SL+ MYA+ G + AR FD + ++VS+ A++ G A + + +A LF ++
Sbjct: 191 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 250
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ ++ F ++L+ + G + K + K G + A+ + R G ++
Sbjct: 251 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIE 309
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
A++ + M NV W ++++ H A ++ K+ PN + +LS
Sbjct: 310 AAFQVFNEME---DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
++++F +P ++ ++W +I Q G + + F M ++ P ++SS++ AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC---GNIRLARCIFDKMDLHDIVSW 211
L L LGKQLH +IR G ++ + SL+DMYAKC G++ +R +F++M H+++SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 212 TAVIMGNALHGNA-HDAISLFEQMEKDGVKPNSVAFVAVLTAC---SHAGLIDKAWSYFN 267
TA+I A G +AI LF +M ++PN +F +VL AC S ++ +SY
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ GIA ++ + R+G++++A
Sbjct: 184 KL----GIASVNCVGNSLISMYARSGRMEDA 210
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/513 (43%), Positives = 330/513 (64%), Gaps = 5/513 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++VSW +I G +NG + A+N+ QM ++P+ FT S++L A + +
Sbjct: 358 VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA----AVSPSQ 413
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH ++ + + +G++L + Y+K ++ ++F L+ KD ++W+++++G Q G
Sbjct: 414 IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGD 473
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +K F Q+ ++P +FSS++ ACA T ++ GKQ H C I++GF + + ++S
Sbjct: 474 IEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSS 533
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MYAK GNI A +F + D+VSW ++I G A HG ++ +FE+M ++
Sbjct: 534 ALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLEL 593
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + F+ V++AC+HAGL+++ YF+ M KDY I P+ EHY+ + DL RAG L++A +
Sbjct: 594 DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 653
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I+ M +W TLL+ACRVH NV+L AEK+ + P + AYV+LSN YA A W
Sbjct: 654 INKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNW 713
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
++ A +R M K +KK SWIEVKNK ++F+AGD SHP RI L+EL R++
Sbjct: 714 QERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDA 773
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDTK VLHDVEEE K+ +L HSERLAI FG+I TP GT I+I+KNLRVCGDCHT I
Sbjct: 774 GYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVI 833
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKI R+I+VRD++RFHHF+ G CSCGDYW
Sbjct: 834 KLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 155/253 (61%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++VSW +++ G +NGL E+AL + QM +KP+ FT ++VL A V KG
Sbjct: 153 MRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H I+ GLD+ + +G+S++NMY+K V D+ +F + ++A+SWNS+IAG V N
Sbjct: 213 VQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTN 272
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + F +M + +K F++++ CA++ + KQLH +I+NG D ++ I
Sbjct: 273 GLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIK 332
Query: 181 SSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+KC I A +F M + ++VSWTA+I G +G A++LF QM ++GV
Sbjct: 333 TALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGV 392
Query: 240 KPNSVAFVAVLTA 252
+PN + +LTA
Sbjct: 393 RPNHFTYSTILTA 405
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 141/254 (55%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P L N ++ +RN +EALN+ + D +LS VL + D I GK
Sbjct: 53 PQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGK 112
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H I+ G +V +G+SL++MY K VED R+F + VK+ +SW S++AG QNG
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L ++ LK F QM + IKP +F++++ A + G Q+H +I++G D +F+ +
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
S+++MY+K + A+ +FD M+ + VSW ++I G +G +A LF +M +GVK
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 242 NSVAFVAVLTACSH 255
F V+ C++
Sbjct: 293 TQTIFATVIKLCAN 306
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/546 (42%), Positives = 335/546 (61%), Gaps = 36/546 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++++WN ++ GL R+G +A+ + M G L+PD+ +S L D V G+++
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARV--------EDSH------------------- 96
HGYA++ G A+ C+ ++LI+MY KC + E SH
Sbjct: 180 HGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQV 239
Query: 97 ----RLFCLLPVK----DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
RLF + + +SW SI+A CVQNG E ++FFR+M +P V+ +
Sbjct: 240 CEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCV 299
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PA A++ L G+ H +R GF +++++S+L+DMYAKCG ++ AR IFD M ++
Sbjct: 300 LPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNV 359
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSW A+I G A++G A +A+ +F M K KP+ V F +L AC+ AGL ++ YF
Sbjct: 360 VSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKE 419
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M +YG++P EHYA + LLGRAGKL EAY+ IS+M P +W +LL +CRVH NV+
Sbjct: 420 MHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVD 479
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
LA AEK+F ++P N G YV+LSN YA+ + W +R M++ G+KK CSWIE+K
Sbjct: 480 LAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIK 539
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
NK + +AGD SHP I E + +L +M + G+VP T VLHDVEE++K ++L HSE
Sbjct: 540 NKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSE 599
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LA+ G+I T GTT+R+IKNLR+CGDCH A+KFIS REI VRD +RFHHF GKC
Sbjct: 600 KLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKC 659
Query: 509 SCGDYW 514
SCGD+W
Sbjct: 660 SCGDFW 665
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 141 RHVSFSS---IMP-ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
RHVSF ++P A TL L + LH +G + F+ASSLL Y + G A
Sbjct: 12 RHVSFPPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNA 71
Query: 197 RCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTAC 253
R +FD M +V W+A++ +A G+A A L E+M +D GV+PN + + +++
Sbjct: 72 RALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGL 131
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
+ +G A +M + + P + +G G
Sbjct: 132 NRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVG 171
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/515 (43%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N VI ++ YE +L+ R+M + +F +++L I A+ + G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A+ D+ + +G+SL++MYAKC E++ +F LP + +SW ++I+G VQ
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL GLK F +M + ++ +F++++ A A +L LGKQLH IIR+G +N+F
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG 490
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAKCG+I+ A +F++M + VSW A+I +A +G+ AI F +M + G++
Sbjct: 491 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+ + VLTACSH G +++ YF +M+ YGI P +HYA + DLLGR G+ EA +
Sbjct: 551 PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 610
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP-NNMGAYVILSNTYAAAR 359
+ M P E +W ++L+ACR+HKN LA + AEK+F ++ + AYV +SN YAAA
Sbjct: 611 LMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W+ ++ MR +G+KK PA SW+EV +K + F + D++HP I + EL +E
Sbjct: 671 EWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY PDT V+ DV+E+ K L YHSERLA+ F +I TP+G I ++KNLR C DCH
Sbjct: 731 REGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHA 790
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV+REI VRD SRFHHF +G CSCGDYW
Sbjct: 791 AIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V++NT+I G ++GLY E++++ +M +P FT S VL D G
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H ++ G + +G+ +++ Y+K RV ++ LF +P D +S+N +I+ Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L FFR+M R+ F++++ A+L++L +G+QLH + D + +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKC A IF + VSWTA+I G G + LF +M ++
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 241 PNSVAFVAVLTACSHAG--LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ F VL A + L+ K F + + + F + + D+ + G +++A
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAF--IIRSGNLENVFSG-SGLVDMYAKCGSIKDA 506
Query: 299 YEFISNMHAGPTENV--WLTLLSA 320
+ M P N W L+SA
Sbjct: 507 VQVFEEM---PDRNAVSWNALISA 527
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 4/255 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVI 58
MP +V+W ++ ARN ++EA + RQM + PD T +++LP D V
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 59 KGKEIHGYAIRHGLDAN--VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
++H +A++ G D N + + + L+ Y + R++ + LF +P KD++++N++I G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
++GL+ E + F +M + +P +FS ++ A L LG+QLH + GF +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + +LD Y+K + R +FD+M D VS+ VI + ++ F +M+
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 237 DGVKPNSVAFVAVLT 251
G + F +L+
Sbjct: 345 MGFDRRNFPFATMLS 359
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N +++I+ + K V + LF +P + ++W ++ +N FDE K FRQM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 135 IAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS--LLDMYAKC 190
+ P HV+F++++P C + Q+H ++ GFD N F+ S LL Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+ LA +F+++ D V++ +I G G ++I LF +M + G +P+ F VL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 251 TA 252
A
Sbjct: 258 KA 259
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/518 (42%), Positives = 331/518 (63%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + DLV+WN++I + G A+ + M + PD TL S+ A D +
Sbjct: 229 MALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGA 288
Query: 61 KEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H Y R G D ++ G+++++MYAK ++++ + ++F LP +D +SWN++I G +Q
Sbjct: 289 KSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQ 348
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL +E ++ + M + +KP +F S++PA ++L L G ++H I+ G + +++
Sbjct: 349 NGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVY 408
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+D+YAKCG + A +F+ M W A+I G +HG+ A+SLF QM+++
Sbjct: 409 VTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEE 468
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP+ V FV++L ACSHAGL+D+ S+F+ M YGI P +HY + D+LGRAG+L EA
Sbjct: 469 IKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEA 528
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+EFI +M P VW LL ACR+H NVE+ ++ +F +DP N+G YV++SN YA
Sbjct: 529 FEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKI 588
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS--HPFYHRINEALKELLE 416
+W ++R +R + ++KTP S +EVK F +G ++ HP + I L +LL
Sbjct: 589 GKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLA 648
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+M+ GYVPD VL DVEE++K+ +L HSERLAI FGII TP GT + I KNLRVCGD
Sbjct: 649 KMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGD 708
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K+ISKI +REIIVRD +RFHHF+DG CSCGD+W
Sbjct: 709 CHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 10/329 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ +WN ++ GL RN +A+ ++ +M + D+ TLSSVLP+ D
Sbjct: 128 MPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALA 187
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H YA++HGL + + ++LI++Y K + ++H +F + ++D ++WNSII+ Q
Sbjct: 188 LVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQG 247
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ F M+ + + P ++ S+ A A K +H + R G+D IA
Sbjct: 248 GKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIA 307
Query: 181 -SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
++++DMYAK I A+ +FD + D+VSW +I G +G A++AI ++ M +G
Sbjct: 308 GNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEG 367
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP FV+VL A S+ G + + ++++ G+ + DL + GKL EA
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMR-MHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEA 426
Query: 299 ---YEFISNMHAGPTENVWLTLLSACRVH 324
+E + GP W +++ VH
Sbjct: 427 MFLFEHMPRRSTGP----WNAIIAGLGVH 451
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 115/222 (51%), Gaps = 4/222 (1%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDS 95
L+PDSFT P+ ++H A+R GL NV SL++ Y + RV ++
Sbjct: 65 LRPDSFTFP---PLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+R+F +P +D +WN++++G +N + + +M+ + V+ SS++P C L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L +H +++G +F+ ++L+D+Y K G + A +F M L D+V+W ++I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
N G A+ LF M + GV P+ + V++ +A + G
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG 283
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/510 (43%), Positives = 320/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++W T++ GL +NGL EAL++ R+M + D +T S+L +GK+IH
Sbjct: 242 DSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIH 301
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y R + NV +GS+L++MY+KC + + +F + ++ ISW ++I G QN +
Sbjct: 302 AYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M + IKP + S++ +CA+L +L G Q H + +G + ++++L+
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALV 421
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A +FD+M HD VSWTA++ G A G A + I LFE+M +G+KP+ V
Sbjct: 422 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGV 481
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACS AGL++K YF+SM KD+ I P +HY + DL R+G+ +EA EFI
Sbjct: 482 TFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQ 541
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLS+CR+ N+E+ AE + DP N +YV+L + +AA +W +
Sbjct: 542 MPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEV 601
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR++ +KK P CSWI+ KNK + F A D+SHPF RI E L+ L +M +EGY
Sbjct: 602 AHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYK 661
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD VLHDV + K +++ +HSE+LAI FG+I P IRI+KNLRVC DCH A KFI
Sbjct: 662 PDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFI 721
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R+I+VRD RFH F DG CSCGD+W
Sbjct: 722 SKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 173/337 (51%), Gaps = 33/337 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VS+N +I G + G ++ + R + +++P TLS+++ + + D
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRAL 164
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
G +H +R G A +GS L++MYAK
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +ED+ LF L+ +D+I+W +++ G QNGL E L FR+M + +F SI
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC L GKQ+H I R ++DN+F+ S+L+DMY+KC +IRLA +F +M +I
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWTA+I+G + + +A+ F +M+ DG+KP+ +V+++C++ +++ + F+
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG-AQFHC 403
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ G+ A+ L G+ G +++A+ M
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 8/228 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +IVG +N EEA+ +M +KPD FTL SV+ A+ + +G
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H A+ GL + + ++L+ +Y KC +ED+HRLF + D +SW +++ G Q
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF 458
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN----GFDDN 176
G E + F +ML+ +KP V+F ++ AC+ + G + ++ DD+
Sbjct: 459 GKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDH 518
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ ++D+Y++ G + A +M D W ++ L GN
Sbjct: 519 Y---TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 36/247 (14%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P +F L+ +L +A + + + + D N+ ++L++ A V D RL
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRV----FDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTT 157
F +P +DA+S+N++I G G ++ +R +L + ++P ++ S+++ + L+
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL------------ 205
LG +H ++R GF F+ S L+DMYAK G IR AR +F +M+
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 206 -------------------HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
D ++WT ++ G +G +A+ +F +M +GV + F
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281
Query: 247 VAVLTAC 253
++LTAC
Sbjct: 282 GSILTAC 288
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/516 (44%), Positives = 329/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G +EAL++ ++M N+KPD T+ +V+ A + G
Sbjct: 195 IPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLG 254
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HGL +N+ I ++LI++Y+KC VE + LF L KD ISWN++I G
Sbjct: 255 RQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHL 314
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACA L + G+ +H I + G +
Sbjct: 315 NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASS 374
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ M + + A+I G A+HG A+ A +F +M K+G
Sbjct: 375 LRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNG 434
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SMT++Y I P EHY + DLLG G +EA
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEA 494
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC++H NVEL A+K+ I+P N G+YV+LSN YA A
Sbjct: 495 EEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATA 554
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A++R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 555 GRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 614
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 615 EEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 674
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 675 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 173/335 (51%), Gaps = 34/335 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + A+ + M ++ L P+S+T +L A +G++IH
Sbjct: 67 NLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIH 126
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------------- 96
G+ ++ G + ++ + +SLI+MY K R +D+H
Sbjct: 127 GHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIE 186
Query: 97 ---RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++F +PVKD +SWN+II+G G E L F++M+ +KP + +++ ACA
Sbjct: 187 SAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACA 246
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +G N+ I ++L+D+Y+KCG + A +F + D++SW
Sbjct: 247 QSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNT 306
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID-KAWSYFNSMTK 271
+I G H N + +A+ LF++M + G PN V +++L AC+ G ID W + +
Sbjct: 307 MI-GGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
G+ + ++ D+ + G ++ A++ ++MH
Sbjct: 366 IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMH 400
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN---IRLARCIFDKM 203
S++ C L +L + +H +I+ G + + S LL+ N + A +F+ +
Sbjct: 7 SLLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETI 63
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+++ W + G+AL + AI L+ M G+ PNS F +L +C+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCA 114
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/517 (42%), Positives = 331/517 (64%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV++N +I G + NG+ ++ + +++ + L+P S TL +++P+ + +
Sbjct: 282 MEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLA 341
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + ++ GLDAN + ++L +Y + ++ + R F +P K SWN++I+G QN
Sbjct: 342 GCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQN 401
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL + + F+QM ++P ++ SS + ACA L L LGK +H I + N+++
Sbjct: 402 GLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVM 461
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG+I ARCIFD MD ++VSW +I G LHG +A+ L++ M +
Sbjct: 462 TALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLH 521
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P S F++VL ACSH GL+ + + F SMT DYGI P EH + DLLGRAG+L+EA+E
Sbjct: 522 PTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFE 581
Query: 301 FISNMH---AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
IS GP +W LL AC VHK+ +LA ++K+F ++P N G YV+LSN Y +
Sbjct: 582 LISEFPKSAVGP--GIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTS 639
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+++ +AA +R +++ + KTP C+ IE+ ++ + F+AGD++HP I L++L +
Sbjct: 640 KKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAK 699
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M + GY PDT+ L+DVEEE+K++++ HSE+LAI FG++ T GT IRIIKNLRVC DC
Sbjct: 700 MIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDC 759
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A K ISK+ QR I+VRD SRFHHF DG CSCGDYW
Sbjct: 760 HNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 145/261 (55%), Gaps = 5/261 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D V WNT++ GL+ + EAL VR G +++PDS TL+SVLP A+ +
Sbjct: 184 VPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTM 239
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +H + + GL + + + LI++YAKC +E + LF + D +++N++I+G
Sbjct: 240 GRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSI 299
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG+ ++ F++++ ++P + +++P + L LH +++ G D N +
Sbjct: 300 NGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPV 359
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L +Y + ++ AR FD M + SW A+I G A +G A++LF+QM+ V
Sbjct: 360 STALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNV 419
Query: 240 KPNSVAFVAVLTACSHAGLID 260
+PN + + L+AC+ G +
Sbjct: 420 RPNPLTISSALSACAQLGALS 440
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H A+ G A+ + S+L +Y +R D+ ++F +P D + WN+++AG +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202
Query: 121 GLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E L+ F +M A ++P + +S++PA A + +G+ +H + G + +
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ +YAKCG++ AR +FD+M+ D+V++ A+I G +++G ++ LF+++ G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318
Query: 240 KPNSVAFVAVLTACSHAG 257
+P+S VA++ S G
Sbjct: 319 RPSSSTLVALIPVHSPFG 336
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/533 (42%), Positives = 334/533 (62%), Gaps = 30/533 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G ARNGL E+AL + +M V L P++ T++SV+P + IHGYA
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ G + + ++L++MY++ +++ S +F + V+D +SWN++I G V +G + L
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNAL 486
Query: 128 KFFRQM-----------------LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+M KP ++ +++P CA L + GK++H IR
Sbjct: 487 VLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIR 546
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
N ++ + S+L+DMYAKCG + L+R +F++M ++++W +IM +HG +A+ L
Sbjct: 547 NMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALEL 606
Query: 231 FEQMEKDG-----VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
F+ M + KPN V F+ V ACSH+GLI + + F M D+G+ P+ +HYA V
Sbjct: 607 FKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV 666
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTE----NVWLTLLSACRVHKNVELAGKVAEKIFMID 341
DLLGRAG+L+EAYE ++ M P E W +LL ACR+H+NVEL A+ + ++
Sbjct: 667 VDLLGRAGQLEEAYELVNTM---PAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLE 723
Query: 342 PNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSH 401
PN YV+LSN Y++A W A +R MR G+KK P CSWIE +++ + F+AGD SH
Sbjct: 724 PNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSH 783
Query: 402 PFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD 461
P +++ L+ L E+M +EGYVPDT VLH+V+E++K+NLL HSE+LAI FGI+ TP
Sbjct: 784 PQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPP 843
Query: 462 GTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GTTIR+ KNLRVC DCH A KFISKI++REIIVRD RFHHF++G CSCGDYW
Sbjct: 844 GTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 165/301 (54%), Gaps = 17/301 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG---- 60
D VSWN+ I L R +E+AL R M N++ SFTL SV + + V+ G
Sbjct: 158 DQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSV-ALACSNLGVMHGLRLG 216
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HGY++R G D ++L+ MYAK RV+DS LF +D +SWN++I+ Q+
Sbjct: 217 KQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS 275
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
F E L FFR M++ ++ V+ +S++PAC+HL L +GK++H ++RN +N F+
Sbjct: 276 DRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFV 335
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
S+L+DMY C + R +FD + I W A+I G A +G A+ LF +M K G
Sbjct: 336 GSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAG 395
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADLLGRAGK 294
+ PN+ +V+ AC H +A+S S+ Y + F+ A+ D+ R GK
Sbjct: 396 LLPNTTTMASVMPACVHC----EAFSNKESI-HGYAVKLGFKEDRYVQNALMDMYSRMGK 450
Query: 295 L 295
+
Sbjct: 451 M 451
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 5/263 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P SW + R+ + EA++ +M +PD+F +VL + D+ G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 62 EIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH A++ G ++V + ++L+NMY KC + D ++F + +D +SWNS IA +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH---LGKQLHGCIIRNGFDDNM 177
+++ L+ FR M + ++ + S+ AC++L +H LGKQLHG +R G D
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F ++L+ MYAK G + ++ +F+ D+VSW +I + +A++ F M +
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 238 GVKPNSVAFVAVLTACSHAGLID 260
GV+ + V +VL ACSH +D
Sbjct: 292 GVELDGVTIASVLPACSHLERLD 314
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 151/299 (50%), Gaps = 32/299 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-----------------LKPDSFT 43
M V D VSWNT+I G +G Y AL ++ +M + KP++ T
Sbjct: 461 MEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAIT 520
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
L +VLP A + KGKEIH YAIR+ L +++ +GS+L++MYAKC + S R+F +P
Sbjct: 521 LMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP 580
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-----AKIKPRHVSFSSIMPACAHLTTL 158
K+ I+WN +I C +G +E L+ F+ M+ + KP V+F ++ AC+H +
Sbjct: 581 NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 640
Query: 159 HLGKQLHGCIIRN-GFDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVI 215
G L + + G + + ++D+ + G + A + + M + + +W++++
Sbjct: 641 SEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 700
Query: 216 MGNALHGNAHDAISLFEQMEKD--GVKPNSVAFVAVLTAC-SHAGLIDKAWSYFNSMTK 271
+H N + L E K+ ++PN + +L+ S AGL +KA +M +
Sbjct: 701 GACRIHQN----VELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQ 755
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 339/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I G A +G ++ A ++ R++ F +++L I ++ +D G
Sbjct: 311 MPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG 370
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I D+ + +G+SL++MYAKC + E++ +F L + A+ W ++I+ VQ
Sbjct: 371 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 430
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++EGL+ F +M A + +F+S++ A A + +L LGKQLH II++GF N+F
Sbjct: 431 GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG 490
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+LLD+YAKCG+I+ A F +M +IVSW A+I A +G A + F++M G++
Sbjct: 491 SALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQ 550
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+F+ VL+ACSH+GL+++ +FNSMT+ Y + P EHYA+V D+L R+G+ EA +
Sbjct: 551 PDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEK 610
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
++ M P E +W ++L+ACR+HKN ELA + A+++F M + + YV +SN YAAA
Sbjct: 611 LMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAG 670
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ + + MR++G+KK PA SW+E+K++ + F A D+ HP I + + L + ME
Sbjct: 671 QWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTME 730
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY PDT LH+ +E+ K L YHSERLAI F +I TP+G+ I ++KNLR C DCH
Sbjct: 731 ELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHA 790
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV REI VRD++RFHHF DG CSCGD+W
Sbjct: 791 AIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 177/356 (49%), Gaps = 8/356 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I G +++GL E+A+N+ +M N LKP FT ++VL D++ G
Sbjct: 210 MPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLG 269
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + I+ NV + ++L++ Y+K V D+ +LF +P +D +S+N II+G +
Sbjct: 270 QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWD 329
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G FR++ + F++++ ++ +G+Q+H I D + +
Sbjct: 330 GKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG 389
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG A IF + V WTA+I G + + LF +M + V
Sbjct: 390 NSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 449
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ F ++L A + + + + K ++ F +A+ D+ + G +++A +
Sbjct: 450 ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQ 508
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
M P N+ W ++SA + E K +++ + + P+++ +LS
Sbjct: 509 TFQEM---PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 162/322 (50%), Gaps = 18/322 (5%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V+W +I G ++ ++EA + QM +PD T ++L + + ++
Sbjct: 115 VTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 174
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I+ G D+ + +G++L++ Y K R++ + +LF +P D++S+N++I G ++GL ++
Sbjct: 175 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKA 234
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ F +M + +KP +F++++ A L + LG+Q+H +I+ F N+F++++LLD
Sbjct: 235 VNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDF 294
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+K ++ AR +FD+M D VS+ +I G A G A LF +++ F
Sbjct: 295 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 354
Query: 247 VAVLTACSHA-----GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+L+ S+ G A + + + + S + D+ + GK +EA
Sbjct: 355 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS------LVDMYAKCGKFEEAEMI 408
Query: 302 ISNM---HAGPTENVWLTLLSA 320
+N+ A P W ++SA
Sbjct: 409 FTNLTHRSAVP----WTAMISA 426
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N + +I+ Y K + ++ +LF + + A++W +I G Q F E + F QM
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+P +V+F +++ C + Q+ II+ G+D + + ++L+D Y K +
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
LA +F +M D VS+ A+I G + G A++LF +M+ G+KP F AVL C+
Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CA 259
Query: 255 HAGLID 260
+ GL D
Sbjct: 260 NIGLDD 265
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+N NM I+ Y K GN+ AR +FD M V+WT +I G + +A
Sbjct: 81 KNTVSTNMMISG-----YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFE 135
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACS 254
LF QM++ G +P+ V FV +L+ C+
Sbjct: 136 LFVQMQRCGTEPDYVTFVTLLSGCN 160
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 330/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSWNT+I G A+NG EEA +M + ++P + ++ L A+ D+ +G
Sbjct: 304 MSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG 363
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + +V + +SLI+MY+KC RV+ + +F L K ++WN++I G QN
Sbjct: 364 RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQN 423
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M IKP + S++ A A L+ K +HG IR D N+F+
Sbjct: 424 GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC 483
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D +AKCG I+ AR +FD M +++W A+I G +G+ +A+ LF +M+ VK
Sbjct: 484 TALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVK 543
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F++V+ ACSH+GL+++ YF SM ++YG+ P+ +HY A+ DLLGRAG+L +A++
Sbjct: 544 PNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWK 603
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P V +L ACR+HKNVEL K A+++F +DP++ G +V+L+N YA+A
Sbjct: 604 FIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASM 663
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M KG++KTP CS +E++N+ + F +G +HP RI L+ L + M+
Sbjct: 664 WDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKA 723
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT + HDVEE+ K+ LL HSERLAI FG++ T GT I I KNLRVCGDCH A
Sbjct: 724 AGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEA 782
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS + REIIVRD RFHHF++G CSCGDYW
Sbjct: 783 TKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 183/359 (50%), Gaps = 43/359 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNTV+ G A+NG A+ +V QM KPDS TL SVLP AD + G
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIG 262
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHGYA R G + V + +++++ Y KC V + +F + ++ +SWN++I G QN
Sbjct: 263 RSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQN 322
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E F +ML ++P +VS + ACA+L L G+ +H + ++ +
Sbjct: 323 GESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVM 382
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+KC + +A +F + +V+W A+I+G A +G ++A++LF +M+ +K
Sbjct: 383 NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIK 442
Query: 241 PNSVAFVAVLTAC---------------------------------SHA--GLIDKAWSY 265
P+S V+V+TA +HA G I A
Sbjct: 443 PDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKL 502
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWLTLLSAC 321
F+ M + + I + A+ D G G +EA + + M G P E +L++++AC
Sbjct: 503 FDLMQERHVIT-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAAC 556
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 157/256 (61%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V ++T++ G A+N +A+ +M + P + + +L + + +D+ +G+EIHG
Sbjct: 108 VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGM 167
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I +G +N+ ++++N+YAKC ++ED++++F +P +D +SWN+++AG QNG
Sbjct: 168 VITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRA 227
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ QM A KP ++ S++PA A L L +G+ +HG R GF+ + +A+++LD
Sbjct: 228 VQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDT 287
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG++R AR +F M ++VSW +I G A +G + +A + F +M +GV+P +V+
Sbjct: 288 YFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSM 347
Query: 247 VAVLTACSHAGLIDKA 262
+ L AC++ G +++
Sbjct: 348 MGALHACANLGDLERG 363
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 109/197 (55%), Gaps = 3/197 (1%)
Query: 61 KEIHG---YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
KE+H I++G + LI+++ K + ++ R+F + K + +++++ G
Sbjct: 58 KELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGY 117
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+N + ++F+ +M ++ P F+ ++ L G+++HG +I NGF N+
Sbjct: 118 AKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNL 177
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F ++++++YAKC I A +F++M D+VSW V+ G A +G A A+ + QM++
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237
Query: 238 GVKPNSVAFVAVLTACS 254
G KP+S+ V+VL A +
Sbjct: 238 GQKPDSITLVSVLPAVA 254
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
++++ I RH S + ++ C L LH Q+ II+NGF + + L+ ++ K
Sbjct: 33 YQRIFIPSHVYRHPS-AILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCK 88
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
+I A +F+ ++ V + ++ G A + DA+ +E+M D V P F +
Sbjct: 89 FNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYL 148
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
L S L + + M G + AV +L + ++++AY+ M
Sbjct: 149 LQ-LSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERM 203
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 329/515 (63%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWN +I G RNGL E+ ++ ++ + D T+ S+L + + G
Sbjct: 292 MPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATG 351
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG AIR ++N+ + ++++++Y+KC ++ + +F + ++ I+W +++ G QN
Sbjct: 352 KILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQN 410
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L+ F QM I V+F S++ +CAHL +L G+ +HG + R GF ++
Sbjct: 411 GHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNM 470
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG I LA IF + D+V W ++I G +HG+ + A+ ++ +M ++G+
Sbjct: 471 TALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGL 530
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN F+++L+ACSH+ L+++ S FNSM +D+ I P +HYA + DLL RAG+ +EA
Sbjct: 531 KPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQ 590
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M P V LLS CR HKN+ L + ++K+ +D N G Y++LSN YA AR
Sbjct: 591 ALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEAR 650
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW +R MRN+G+KKTP S +E N + F AGD SHP + I L+ L +E
Sbjct: 651 RWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVE 710
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT VL DV+EE K +L+ HSERLAI FG++ TP G+ IRI KNLRVCGDCHT
Sbjct: 711 TSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHT 770
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKIV+REIIVRD +RFHHF +G+CSCGDYW
Sbjct: 771 VTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 202/354 (57%), Gaps = 4/354 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V WN++I G + G ++ A + +M +KP T++S++ ++ G
Sbjct: 191 MPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLG 250
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGY + GL ++ + +S ++MY+K +E + +F +P ++ +SWN++I+GCV+N
Sbjct: 251 KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRN 310
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E F +++ + + S++ C+ +L GK LHGC IR+ F+ N+ ++
Sbjct: 311 GLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILS 369
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++D+Y+KCG+++ A +F++M ++++WTA+++G A +G+A DA+ LF QM+++G+
Sbjct: 370 TAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIA 429
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
NSV FV+++ +C+H G + + S + + G A + A+ D+ + GK+ A
Sbjct: 430 ANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR-LGFAFDIVNMTALVDMYAKCGKINLAER 488
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
S+ +W ++++ +H + A + K+ + PN +LS
Sbjct: 489 IFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLS 542
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 157/309 (50%), Gaps = 3/309 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N ++ G ++G Y E L + M + NL+ DS + + L A +D G EI A+
Sbjct: 99 NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVE 158
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G++ N +GSS+I+ K ++ ++ R+F +P KD + WNSII G VQ G FD +
Sbjct: 159 KGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQL 218
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F +M + IKP ++ +S++ AC + L LGK +HG ++ G +++ + +S +DMY+K
Sbjct: 219 FFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSK 278
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
G+I AR +F KM ++VSW A+I G +G ++ LF ++ + + V++
Sbjct: 279 MGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSL 338
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L CS + + + + A+ DL + G L++A F+ N
Sbjct: 339 LQGCSQTASLATGKILHGCAIRSF--ESNLILSTAIVDLYSKCGSLKQA-TFVFNRMKDR 395
Query: 310 TENVWLTLL 318
W +L
Sbjct: 396 NVITWTAML 404
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K H II N + F+A+ L+ Y+ ++ AR +FD+ + A++ G
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + + LF M ++ +S + L AC+ + + +S + G+ +
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEK-GMEKNRFV 167
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
+++ L + GK+ EA M P ++V
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGM---PNKDV 196
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 335/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I +NG ++EA+ + + M ++KPDS T +L + D+ G
Sbjct: 436 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLXLG 494
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H + G ++N+ + ++L++MYAKC + DS ++F + +D I+WN+IIA CV +
Sbjct: 495 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 554
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ GL+ +M + P + SI+P C+ L GK++HGCI + G + ++ +
Sbjct: 555 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 614
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L++MY+KCG++R + +F M D+V+WTA+I ++G A+ F +ME G+
Sbjct: 615 NVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIV 674
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ VAFVA++ ACSH+GL+++ +YF+ M KDY I P EHYA V DLL R+ L +A +
Sbjct: 675 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 734
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P ++W LLSACR+ + E+A +V+E+I ++P++ G YV++SN YAA +
Sbjct: 735 FILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGK 794
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W S+R ++ +G+KK P CSW+E++NK Y F G K + +N+ L L M +
Sbjct: 795 WDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAK 854
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+ + + VLHD++E++K+++L HSERLAI FG++ T GT ++++KNLRVC DCHT
Sbjct: 855 EGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 914
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKI QRE++VRD +RFH F+DG CSCGDYW
Sbjct: 915 TKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D+VSWN++I G NG + EAL I + N+ + PDS+T+SSVL V +G
Sbjct: 235 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG + G+ +V + + L++MY K + D R+F + ++DA+SWN++I G Q
Sbjct: 295 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 354
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL++E +K F +M + + KP ++ +SI+ AC HL L GK +H +I +G++ + +
Sbjct: 355 GLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 413
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L++MYAKCGN+ ++ +F M D VSW ++I +G+ +A+ LF+ M+ D VK
Sbjct: 414 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VK 472
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV +V +L+ + G + + K G + + D+ + G++ ++ +
Sbjct: 473 PDSVTYVMLLSMSTQLGDLXLGKELHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSLK 531
Query: 301 FISNMHAGPTENVWLTLLSAC 321
NM A W T++++C
Sbjct: 532 VFENMKARDII-TWNTIIASC 551
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 164/308 (53%), Gaps = 10/308 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +++ WN++I L NGL+ EAL++ + + L+PD++T SV+ A +D K
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
IH + G +++ IG++LI+MY + ++ + ++F +P++D +SWNS+I+G NG
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + + + P + SS++ AC L ++ G +HG I + G ++ + +
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
LL MY K + R IFDKM L D VSW +I G + G ++I LF +M + KP
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKP 373
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQE 297
+ + ++L AC H G ++ F DY I +E +++L + G L
Sbjct: 374 DLLTITSILQACGHLGDLE-----FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 428
Query: 298 AYEFISNM 305
+ E S M
Sbjct: 429 SQEVFSGM 436
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL- 102
SS+ A + ++H I GL +V + LI YA S +F L
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P + WNSII NGLF E L + + +++P +F S++ ACA L + K
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
+H ++ GF +++I ++L+DMY + ++ AR +F++M L D+VSW ++I G +G
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
++A+ ++ + GV P+S +VL AC G +++
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R FSSI A A T +LH II G ++ ++ L+ YA + + +F
Sbjct: 71 RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 130
Query: 201 D-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+++ W ++I +G +A+SL+ + ++ ++P++ F +V+ AC AGL+
Sbjct: 131 RLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLL 188
Query: 260 D 260
D
Sbjct: 189 D 189
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 316/514 (61%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + D +W+ ++ G A+ G + R++ + PD++TL V+ D D+ G
Sbjct: 61 LTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIG 120
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++HGL ++ + +SL++MYAKC VED+ RLF + KD ++W +I
Sbjct: 121 RVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC 180
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E L F +M + P V+ +++ ACA L +H + + I+RNGF ++ +
Sbjct: 181 NAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG 239
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMYAKCG++ AR +FD+M +++SW+A+I HG DAI LF M +
Sbjct: 240 TAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL 299
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V FV++L ACSHAGLI++ +FNSM +++ + P +HY + DLLGRAG+L EA
Sbjct: 300 PNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALR 359
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M E +W LL ACR+H +ELA K A + + P N G YV+LSN YA A +
Sbjct: 360 LIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGK 419
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ A R M + +KK P +WIEV NK Y F GD+SHP I E L L++++E
Sbjct: 420 WEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEM 479
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL DVEEE K+ +LY HSE+LAI FG+I P+G IRI KNLRVCGDCHT
Sbjct: 480 AGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTF 539
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S I++R IIVRD +RFHHF DG CSCGDYW
Sbjct: 540 SKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 147/271 (54%), Gaps = 7/271 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+V +++H + + +G ++ I + L+ YA+ ++D++ LF L ++D+ +W+ ++
Sbjct: 15 NVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVG 74
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + G FR++L + P + + ++ C T L +G+ +H ++++G
Sbjct: 75 GFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLS 134
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ F+ +SL+DMYAKC + A+ +F++M D+V+WT V++G NA++++ LF++M
Sbjct: 135 DHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWT-VMIGAYADCNAYESLVLFDRMR 193
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++GV P+ VA V V+ AC+ G + +A + N G + A+ D+ + G +
Sbjct: 194 EEGVVPDKVAMVTVVNACAKLGAMHRA-RFANDYIVRNGFSLDVILGTAMIDMYAKCGSV 252
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ A E M +NV W +++A H
Sbjct: 253 ESAREVFDRM---KEKNVISWSAMIAAYGYH 280
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 336/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I +NG ++EA+ + + M ++KPDS T +L + D+ G
Sbjct: 377 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLHLG 435
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H + G ++N+ + ++L++MYAKC + DS ++F + +D I+WN+IIA CV +
Sbjct: 436 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 495
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ GL+ +M + P + SI+P C+ L GK++HGCI + G + ++ +
Sbjct: 496 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 555
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L++MY+KCG++R + +F M D+V+WTA+I ++G A+ F +ME G+
Sbjct: 556 NVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIV 615
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ VAFVA++ ACSH+GL+++ +YF+ M KDY I P EHYA V DLL R+ L +A +
Sbjct: 616 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 675
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P ++W LLSACR+ + E+A +V+E+I ++P++ G YV++SN YAA +
Sbjct: 676 FILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGK 735
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W S+R ++ +G+KK P CSW+E++NK Y F G K + +N+ L L M +
Sbjct: 736 WDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAK 795
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+ + + VLHD++E++K+++L HSERLAI FG++ T GT ++++KNLRVC DCHT
Sbjct: 796 EGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 855
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKIVQRE++VRD +RFH F+DG CSCGDYW
Sbjct: 856 TKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D+VSWN++I G NG + EAL I + N+ + PDS+T+SSVL V +G
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG + G+ +V + + L++MY K + D R+F + ++DA+SWN++I G Q
Sbjct: 236 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 295
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL++E +K F +M + + KP ++ +SI+ AC HL L GK +H +I +G++ + +
Sbjct: 296 GLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 354
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L++MYAKCGN+ ++ +F M D VSW ++I +G+ +A+ LF+ M+ D VK
Sbjct: 355 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VK 413
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV +V +L+ + G + + K G + + D+ + G++ ++ +
Sbjct: 414 PDSVTYVMLLSMSTQLGDLHLGKELHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSLK 472
Query: 301 FISNMHAGPTENVWLTLLSAC 321
NM A W T++++C
Sbjct: 473 VFENMKARDIIT-WNTIIASC 492
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 164/308 (53%), Gaps = 10/308 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +++ WN++I L NGL+ EAL++ + + L+PD++T SV+ A +D K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
IH + G +++ IG++LI+MY + ++ + ++F +P++D +SWNS+I+G NG
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + + + P + SS++ AC L ++ G +HG I + G ++ + +
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
LL MY K + R IFDKM L D VSW +I G + G ++I LF +M + KP
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKP 314
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQE 297
+ + ++L AC H G ++ F DY I +E +++L + G L
Sbjct: 315 DLLTITSILQACGHLGDLE-----FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 369
Query: 298 AYEFISNM 305
+ E S M
Sbjct: 370 SQEVFSGM 377
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL- 102
SS+ A + ++H I GL +V + LI YA S +F L
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P + WNSII NGLF E L + + +++P +F S++ ACA L + K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
+H ++ GF +++I ++L+DMY + ++ AR +F++M L D+VSW ++I G +G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
++A+ ++ + GV P+S +VL AC G +++
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R FSSI A A T +LH II G ++ ++ L+ YA + + +F
Sbjct: 12 RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 71
Query: 201 D-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+++ W ++I +G +A+SL+ + ++ ++P++ F +V+ AC AGL+
Sbjct: 72 RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLL 129
Query: 260 D-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLT 316
D + + D G A+ D+ R L +A + M P +V W +
Sbjct: 130 DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM---PLRDVVSWNS 186
Query: 317 LLSA 320
L+S
Sbjct: 187 LISG 190
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 339/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I G A +G ++ A ++ R++ F +++L I ++ +D G
Sbjct: 271 MPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG 330
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I D+ + +G+SL++MYAKC + E++ +F L + A+ W ++I+ VQ
Sbjct: 331 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 390
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++EGL+ F +M A + +F+S++ A A + +L LGKQLH II++GF N+F
Sbjct: 391 GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG 450
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+LLD+YAKCG+I+ A F +M +IVSW A+I A +G A + F++M G++
Sbjct: 451 SALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQ 510
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+F+ VL+ACSH+GL+++ +FNSMT+ Y + P EHYA+V D+L R+G+ EA +
Sbjct: 511 PDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEK 570
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
++ M P E +W ++L+ACR+HKN ELA + A+++F M + + YV +SN YAAA
Sbjct: 571 LMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAG 630
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ + + MR++G+KK PA SW+E+K++ + F A D+ HP I + + L + ME
Sbjct: 631 QWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTME 690
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY PDT LH+ +E+ K L YHSERLAI F +I TP+G+ I ++KNLR C DCH
Sbjct: 691 ELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHA 750
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV REI VRD++RFHHF DG CSCGD+W
Sbjct: 751 AIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 167/353 (47%), Gaps = 12/353 (3%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S L+ NT++ ++ + A + ++M + DSFT ++VL D++ G++I
Sbjct: 177 SRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI----DSFTFAAVLCANIGLDDIVLGQQI 232
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + I+ NV + ++L++ Y+K V D+ +LF +P +D +S+N II+G +G
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
FR++ + F++++ ++ +G+Q+H I D + + +SL
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 352
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMYAKCG A IF + V WTA+I G + + LF +M + V +
Sbjct: 353 VDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 412
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
F ++L A + + + + K G + +A+ D+ + G +++A +
Sbjct: 413 ATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 471
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
M P N+ W ++SA + E K +++ + + P+++ +LS
Sbjct: 472 EM---PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 521
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 53/322 (16%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V+W +I G ++ ++EA + QM +PD T ++L + + ++
Sbjct: 110 VTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 169
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I+ G D+ + +G++L++ Y K R++ + +LF +P D+ ++ +++ C GL D
Sbjct: 170 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVL--CANIGLDD-- 225
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ LG+Q+H +I+ F N+F++++LLD
Sbjct: 226 -------------------------------IVLGQQIHSFVIKTNFVWNVFVSNALLDF 254
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+K ++ AR +FD+M D VS+ +I G A G A LF +++ F
Sbjct: 255 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 314
Query: 247 VAVLTACSHA-----GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+L+ S+ G A + + + + S + D+ + GK +EA
Sbjct: 315 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS------LVDMYAKCGKFEEAEMI 368
Query: 302 ISNM---HAGPTENVWLTLLSA 320
+N+ A P W ++SA
Sbjct: 369 FTNLTHRSAVP----WTAMISA 386
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N + +I+ Y K + ++ +LF + + A++W +I G Q F E + F QM
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+P +V+F +++ C + Q+ II+ G+D + + ++L+D Y K +
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA-- 252
LA +F +M D ++ AV+ N D I L +Q+ +K N V V V A
Sbjct: 197 LACQLFKEMPEIDSFTFAAVLCANI----GLDDIVLGQQIHSFVIKTNFVWNVFVSNALL 252
Query: 253 ---CSHAGLIDKAWSYFNSMTKDYGIA 276
H +ID A F+ M + G++
Sbjct: 253 DFYSKHDSVID-ARKLFDEMPEQDGVS 278
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+N NM I+ Y K GN+ AR +FD M V+WT +I G + +A
Sbjct: 76 KNTVSTNMMISG-----YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFE 130
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACS 254
LF QM++ G +P+ V FV +L+ C+
Sbjct: 131 LFVQMQRCGTEPDYVTFVTLLSGCN 155
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/514 (41%), Positives = 317/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL GL E++L M + PD F L SV A +DV+ G
Sbjct: 134 MPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSG 193
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R G+D+++C+G+SL +MY +C + + + LP +S+N+ IAG QN
Sbjct: 194 RQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQN 253
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L++F M ++ P V+F S + C+ L L G+Q+H +I+ G D + +
Sbjct: 254 GDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVI 313
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY++CG + + ++D D+ +A+I HG H A+ LF+QM G +
Sbjct: 314 TSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAE 373
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+A+L ACSH+GL D+ +F MTK YG PS +HY + DLLGR+G L EA
Sbjct: 374 PNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEA 433
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M +W TLLSAC+ KN ++A ++AE++ DP + YV+LSN A ++R
Sbjct: 434 LILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKR 493
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D +R MR K ++K P SW+E K + + F GDKSHP I+E LKE++ ++ Q
Sbjct: 494 WGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQ 553
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD V HD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 554 CGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVA 613
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS++ REI+VRD SRFHHF DG+CSCGDYW
Sbjct: 614 IKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 12/295 (4%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
D FT +++L +AD D+ + + G + R+ + N+ IG + N AR L
Sbjct: 76 DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSAR-----EL 130
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F +P ++ +WN+++AG GL ++ L+FF M + P S+ CA L +
Sbjct: 131 FDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDV 190
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G+Q+H ++R+G D +M + +SL MY +CG + + + IVS+ I G
Sbjct: 191 VSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGR 250
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+G++ A+ F M V P+ V FV+ ++ CS + + + K G+
Sbjct: 251 TQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIK-AGVDKV 309
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC----RVHKNVEL 329
++ + R G L ++ E + + + G + ++SAC + HK VEL
Sbjct: 310 VPVITSLVHMYSRCGCLGDS-ERVYDGYCGLDLFLLSAMISACGFHGQGHKAVEL 363
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS I AC + L +QLH +G + F ++LL YA G++ AR +F+ +
Sbjct: 48 FSHIFRACRAIPLL---RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGIS 104
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++SW +I G +G+ A LF++M N + A++ ++ GL + +
Sbjct: 105 KRNVMSWNILIGGCIKNGDLGSARELFDKMPTR----NVATWNAMVAGLTNVGLDEDSLQ 160
Query: 265 YFNSMTK------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+F +M + ++G+ F A + D++ +G+ AY S M
Sbjct: 161 FFLAMRREGMHPDEFGLGSVFRCCAGLLDVV--SGRQVHAYVVRSGM 205
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/517 (44%), Positives = 324/517 (62%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DL SWNT++ G +NG A + M D TL ++L D +D+ G
Sbjct: 185 MLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVG 244
Query: 61 KEIHGYAIRHGLDANVCIG---SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
KEIHGY +R+G VC G +S+I+MY C V + +LF L VKD +SWNS+I+G
Sbjct: 245 KEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGY 304
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ G + L+ F +M++ P V+ S++ AC ++ L LG + +++ G+ N+
Sbjct: 305 EKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNV 364
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+ MYA CG++ A +FD+M ++ + T ++ G +HG +AIS+F +M
Sbjct: 365 VVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGK 424
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV P+ F AVL+ACSH+GL+D+ F MT+DY + P HY+ + DLLGRAG L E
Sbjct: 425 GVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDE 484
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY I NM P E+VW LLSACR+H+NV+LA A+K+F ++P+ + YV LSN YAA
Sbjct: 485 AYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAA 544
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
RRW+D ++R + + ++K P+ S++E+ + F GD SH I LK+L E+
Sbjct: 545 ERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQ 604
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GY PDT VL+DVEEE K+ +L+ HSERLA+ F +I T GTTIRI KNLRVCGDC
Sbjct: 605 LKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDC 664
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK ISK+ REII+RD RFHHF DG CSCG YW
Sbjct: 665 HTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN++I G A N AL + +M + KPD+FT VL D + G+++H +
Sbjct: 92 WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVV 151
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
GL+ +V +G+S+++MY K VE + +F + V+D SWN++++G V+NG +
Sbjct: 152 VGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFE 211
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD---NMFIASSLLD 185
F M + +++ AC + L +GK++HG ++RNG N F+ +S++D
Sbjct: 212 VFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIID 271
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY C ++ AR +F+ + + D+VSW ++I G G+A A+ LF +M G P+ V
Sbjct: 272 MYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVT 331
Query: 246 FVAVLTACSH 255
++VL AC+
Sbjct: 332 VISVLAACNQ 341
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRL 98
DS ++L + + + ++H + G L N + + L YA C + + +
Sbjct: 21 DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F + +K++ WNS+I G N L + +ML KP + ++ ++ AC L
Sbjct: 81 FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+G+++H ++ G ++++++ +S+L MY K G++ AR +FD+M + D+ SW ++ G
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGF 200
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+G A A +F M +DG + +A+L+AC
Sbjct: 201 VKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSAC 235
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 320/514 (62%), Gaps = 33/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN+++ G ARNG +++AL + ++M + LKPD+ T++S+LP
Sbjct: 1187 MPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT-------- 1238
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
N C+ + V +F L K +SWN +IA + N
Sbjct: 1239 --------------NTCLDN-----------VSFVKEMFMKLANKSLVSWNVMIAVYMNN 1273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E + F QM + P +S +S++PAC L+ L LG+++H ++R N+ +
Sbjct: 1274 SMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 1333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +FD+M D+VSWT++I ++G DA+SLF +M+ G+
Sbjct: 1334 NALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN 1393
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV+VL+ACSHAGL+D+ YF MT++ I P EH+ + DLLGRAG++ EAY
Sbjct: 1394 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYG 1453
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P E VW LLSACRV+ N+ + A+++F + P G YV+LSN YA A R
Sbjct: 1454 FIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGR 1513
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D ++R M+ KG+KK P S E+ N+ + F+AGD+SHP +I E L L+ +M++
Sbjct: 1514 WEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKE 1573
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T LHDVEEE K+ L HSE+LAI F I+ T G+ IRI KNLRVCGDCH A
Sbjct: 1574 AGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIA 1633
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV REI +RD +RFHHF +G CSCGDYW
Sbjct: 1634 AKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 41/323 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++V +N +I N LY +AL + + M + PD +T VL + D+ G
Sbjct: 1086 IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVG 1145
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH +R GLD NV +G+ LI+MY KC + ++ R+ +P +D +SWNS++AGC +N
Sbjct: 1146 MQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARN 1205
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G FD+ L+ ++M + +KP + +S++PA +
Sbjct: 1206 GQFDDALEVCKEMELLGLKPDAGTMASLLPA---------------------------VT 1238
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT---AVIMGNALHGNAHDAISLFEQMEKD 237
++ LD N+ + +F K+ +VSW AV M N++ +A+ +F QME
Sbjct: 1239 NTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA---EAVDIFLQMEDH 1289
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
V P++++ +VL AC + + + + P+ A+ D+ + G L+
Sbjct: 1290 AVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEY 1348
Query: 298 AYEFISNMHAGPTENVWLTLLSA 320
A E M + W +++SA
Sbjct: 1349 AREVFDQMKFRDVVS-WTSMISA 1370
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 1/204 (0%)
Query: 56 DVIKGKEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ K++H I H L +N +G L+ YA C + +F +P K+ + +N +I
Sbjct: 1039 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 1098
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
V N L+ + L F+ M I P H ++ ++ A + L +G Q+H ++R G D
Sbjct: 1099 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 1158
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
N+F+ + L+ MY KCG + A + D+M D+VSW +++ G A +G DA+ + ++M
Sbjct: 1159 LNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 1218
Query: 235 EKDGVKPNSVAFVAVLTACSHAGL 258
E G+KP++ ++L A ++ L
Sbjct: 1219 ELLGLKPDAGTMASLLPAVTNTCL 1242
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 329/510 (64%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WN ++ G ++ + L + M + D FTL++V + +GK++H
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ G D ++ + S +++MY KC + + F +PV D ++W ++I+GC++NG +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
F QM + + P + +++ A + LT L G+Q+H ++ ++ F+ +SL+
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I A C+F ++++ +I +W A+++G A HG + + LF+QM+ G+KP+ V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL+ +A+ + SM DYGI P EHY+ +AD LGRAG +++A I +
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ TLL+ACRV + E +VA K+ ++P + AYV+LSN YAAA +W +
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ +KK P SWIEVKNK + FV D+S+ I +K+++ ++QEGYV
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T L DVEEE+K+ LYYHSE+LA+ FG++ TP T IR+IKNLRVCGDCH A+K+I
Sbjct: 901 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYI 960
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K+ REI++RD +RFH F+DG CSCGDYW
Sbjct: 961 AKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
VS+++ N + +G Y L M +++ D T +L + G++
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H A++ GLD + + +SLINMY K + + +F + +D ISWNS+IAG QNGL
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIAS 181
E + F Q+L +KP + +S++ A + L L L KQ+H I+ + F+++
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+D Y++ ++ A +F++ + D+V+W A++ G + H + LF M K G +
Sbjct: 457 ALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS 515
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADLLGRAGKLQE 297
+ V C I++ Y I ++ + + D+ + G +
Sbjct: 516 DDFTLATVFKTCGFLFAINQG-----KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 298 AYEFISNMHAGPTENVWLTLLSAC 321
A +F + P + W T++S C
Sbjct: 571 A-QFAFDSIPVPDDVAWTTMISGC 593
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D V+W T+I G NG E A ++ QM + + PD FT++++ + + +G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH A++ + +G+SL++MYAKC ++D++ LF + + + +WN+++ G Q+
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-----HLGKQLHGCIIRNGFDD 175
G E L+ F+QM IKP V+F ++ AC+H + H+ + +HG G
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM-RSMHG---DYGIKP 753
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+ S L D + G ++ A + + M +
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESMSME 784
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D++ GK H + + + ++LI+MY+KC + + R+F +P +D +SWNSI+A
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 116 GCVQNGL-----FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
Q+ + FR + + ++ S ++ C H + + HG +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G D + F+A +L+++Y K G ++ + +F++M D+V W ++ G +AI L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 231 FEQMEKDGVKPNSVAF 246
G+ PN +
Sbjct: 234 SSAFHSSGLNPNEITL 249
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-----YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
MP DLVSWN+++ A++ ++A + R + + TLS +L +
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
V + HGYA + GLD + + +L+N+Y K +V++ LF +P +D + WN ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
++ G +E + + + P ++
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/516 (43%), Positives = 333/516 (64%), Gaps = 3/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+VSWN++I +N A +M L+PD TL S+ I A D
Sbjct: 334 MFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNS 393
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +HG+ +R G L V IG+++++MYAK ++ +H++F L+PVKD +SWN++I+G Q
Sbjct: 394 RSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQ 453
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E ++ +R M + IK ++ SI+ A AH+ L G ++HG +I+ ++F
Sbjct: 454 NGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVF 513
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+D+Y KCG + A C+F ++ V W A+I + +HG+ A+ LF +M+ +G
Sbjct: 514 VGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEG 573
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ V F+++L+ACSH+GL+D+ +F+ M ++YGI PS +HY + DLLGRAG L+ A
Sbjct: 574 VKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMA 632
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FI +M P ++W LL ACR+H N+EL ++++F +D N+G YV+LSN YA
Sbjct: 633 YDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANV 692
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ +R R +G+KKTP S IEV + F G++SHP I L+ L +M
Sbjct: 693 GKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKM 752
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GY+PD VL DVEE++K+++L HSERLAI FGII TP + IRI KNLRVCGDCH
Sbjct: 753 KSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCH 812
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS+I +REI+VRD+ RFHHF++G CSCGDYW
Sbjct: 813 NATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 182/341 (53%), Gaps = 8/341 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SWN +I GL +NG +AL+++ +M + DS T++S+LP+ A D+
Sbjct: 233 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA 292
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH Y I+HGL+ + + ++LINMYAK + D+ ++F + ++D +SWNSIIA QN
Sbjct: 293 TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQN 352
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDNMFI 179
FF +M + ++P ++ S+ A + +HG I+R G+ + + I
Sbjct: 353 DDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVI 412
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
++++DMYAK G I A +F+ + + D+VSW +I G +G A +AI ++ ME+
Sbjct: 413 GNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE 472
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+K N +V++L A +H G + + + K F + DL G+ G+L +A
Sbjct: 473 IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVG-TCLIDLYGKCGRLVDA 531
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
+ + P E+ W ++S +H + E A K+ ++
Sbjct: 532 ---MCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREM 569
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 185/360 (51%), Gaps = 17/360 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+ +WN++I RNG + EA++ Q+ V + D +T VL VD G++I
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKI 194
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + + G +V + +SLI+MY++ V + LF +P +D SWN++I+G +QNG
Sbjct: 195 HCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 254
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L +M + I V+ +SI+P CA L + +H +I++G + +F++++L
Sbjct: 255 AQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNAL 314
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++MYAK GN+ A+ +F +M L D+VSW ++I + + A F +M+ +G++P+
Sbjct: 315 INMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDL 374
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ V++ + + + + S + + + + AV D+ + G + A++ +
Sbjct: 375 LTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFN 434
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPN-----NMGAYVILSNTYA 356
+ P ++V W TL+S + LA + E M++ N G +V + YA
Sbjct: 435 LI---PVKDVVSWNTLISG---YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYA 488
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 166/329 (50%), Gaps = 9/329 (2%)
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
+F + K +H + G + I L+N+YA V S F + KD +
Sbjct: 82 LFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYT 141
Query: 110 WNSIIAGCVQNGLFDEGLK-FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
WNS+I+ V+NG F E + F++ +L+ K + +F ++ AC TL G+++H +
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWV 198
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+ GF ++F+A+SL+ MY++ G + +AR +FD M D+ SW A+I G +GNA A+
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+ ++M +G+ +SV ++L C+ G I A + + +G+ A+ ++
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTA-TLIHLYVIKHGLEFELFVSNALINM 317
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMG 346
+ G L +A + M + W ++++A + + A K+ + ++P+ +
Sbjct: 318 YAKFGNLGDAQKVFQQMFLRDVVS-WNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLL- 375
Query: 347 AYVILSNTYAAARRWKDAASLRVFMRNKG 375
V L++ A +R +K++ S+ F+ +G
Sbjct: 376 TLVSLASIAAQSRDYKNSRSVHGFIMRRG 404
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 120 NGLFDEGLKF-FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG F+ + F +RQ K + F+S+ +C T L K+LH ++ +G + F
Sbjct: 57 NGWFNGQIPFHWRQ----PAKNEEIDFNSLFDSC---TKTLLAKRLHALLVVSGKIQSNF 109
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ-MEKD 237
I+ L+++YA G++ L+R FD++ D+ +W ++I +G+ +AI F Q +
Sbjct: 110 ISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVT 169
Query: 238 GVKPNSVAFVAVLTACSHAGLID----KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
+ + F VL AC L+D W + D +A S H + +G A
Sbjct: 170 KFQADFYTFPPVLKACQ--TLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIAR 227
Query: 294 KLQEAYEF 301
L + F
Sbjct: 228 SLFDDMPF 235
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/509 (44%), Positives = 324/509 (63%), Gaps = 1/509 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSW ++I G +NG EALN+ ++M N+KPD L SV+ + + D+ +GK IHG
Sbjct: 151 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 210
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ GL+ I SL MYAK VE + F + + I WN++I+G NG +E
Sbjct: 211 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 270
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+K FR+M+ I+ ++ S + A A + +L L + L G I ++ + D+ F+ + L+D
Sbjct: 271 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 330
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG+I LARC+FD++ D+V W+ +IMG LHG+ +AI L+ +M++ GV PN
Sbjct: 331 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 390
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ +LTAC ++GL+ + W F+ M D+GI P +HY+ V DLLGRAG L +AY+FI +M
Sbjct: 391 FIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 449
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +VW LLSAC++H+ V L AE++F++DP N G YV LSN YA+A W A
Sbjct: 450 PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVA 509
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
++R+ M KG+ K S IE+ F GD+SHP I E L L +R++ GYVP
Sbjct: 510 NVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVP 569
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
+ VLHD+ E+ + L +HSERLA+ +GII T GTT+RI KNLR C +CH+AIK IS
Sbjct: 570 HMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLIS 629
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+V REII+RD RFHHF+DG CSCGD+W
Sbjct: 630 KLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 137/258 (53%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++ WN +I G + + + + + M + P+ FT VL GK+IH
Sbjct: 49 DILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIH 108
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++G +NV + +SL++MYAK ++ + +F L + +SW SII+G VQNG
Sbjct: 109 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM 168
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F++M +KP ++ S+M A ++ L GK +HG + + G + I SL
Sbjct: 169 EALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT 228
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAK G + +AR F++M+ +++ W A+I G A +G +AI LF +M ++ +S+
Sbjct: 229 TMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSI 288
Query: 245 AFVAVLTACSHAGLIDKA 262
+ + A + G ++ A
Sbjct: 289 TMRSAVLASAQVGSLELA 306
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
IN V +H+ F + D + WN+II G Q + D ++ + M I+++ P
Sbjct: 25 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPN 84
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+F ++ AC + +GKQ+HG + GF N+F+ +SL+ MYAK G I AR +FD
Sbjct: 85 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 144
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
K+ +VSWT++I G +G+ +A+++F++M + VKP+ +A V+V+TA ++ + +
Sbjct: 145 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 204
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
S +TK G+ + ++ + + G L E F N P +W ++S
Sbjct: 205 GKSIHGLVTK-LGLEFEPDIVISLTTMYAKRG-LVEVARFFFNRMEKPNLILWNAMISGY 262
Query: 322 RVH----KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR--RWKDA 364
+ + ++L ++ K +D M + V+ S + RW D
Sbjct: 263 ANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDG 311
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +L+ WN +I G A NG EEA+ + R+M N++ DS T+ S + A +
Sbjct: 247 MEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELA 306
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + GY + + + + LI+MYAKC + + +F + KD + W+ +I G +
Sbjct: 307 RWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLH 366
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + + +M A + P +F ++ AC + + G +L + +G + +
Sbjct: 367 GHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHY 426
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALH 221
S ++D+ + G + A M + VS W A++ +H
Sbjct: 427 SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 2/158 (1%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q++ +I +G F+ ++ G++ A F ++ DI+ W A+I G
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
I ++ M+ V PN F+ VL AC ++ + T YG +
Sbjct: 65 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTS-VEGIGKQIHGQTFKYGFGSNVFVQ 123
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
++ + + G++ A +H T W +++S
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLH-DRTVVSWTSIISG 160
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/516 (43%), Positives = 326/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+VSWN +I G A G +EAL + ++M N++PD T+ SV+ A + G
Sbjct: 195 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELG 254
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y KC VE + LF L KD ISWN++I G
Sbjct: 255 RQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM 314
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + G +
Sbjct: 315 NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASS 374
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+SL+DMYAKCG+I A+ +FD + + SW A+I G A+HG A+ A +F +M K+
Sbjct: 375 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 434
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SM +DY I P EHY + DLLG +G +EA
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 494
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC+++ NVEL A+ + I+P N G+YV+LSN YA A
Sbjct: 495 EEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 554
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A +R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 555 GRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 614
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 615 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 674
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 675 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 173/333 (51%), Gaps = 32/333 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+ +T +L A +G++IH
Sbjct: 67 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIH 126
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVED--------SHR------------------- 97
G+ ++ G D ++ + +SLI+MY + R+ED SHR
Sbjct: 127 GHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIA 186
Query: 98 ----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F +P+KD +SWN++I+G + G E L+ F++M+ ++P + S++ ACA
Sbjct: 187 SAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 246
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D+Y KCG + A +F+ + D++SW
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNT 306
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKD 272
+I G +A+ LF++M + G PN V +++L AC+H G I+ W + +
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRL 366
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+A + H ++ D+ + G ++ A + ++
Sbjct: 367 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 399
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/515 (42%), Positives = 338/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +++SW +I ++G +EA+ + +M + +++P+ F+ SSVL + D
Sbjct: 295 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 354
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++++ YA++ G+ + C+G+SLI+MYA+ R+ED+ + F +L K+ +S+N+I+ G +
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N +E F ++ I +F+S++ A + + G+Q+HG +++ G+ N I
Sbjct: 415 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 474
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY++CGNI A +F++M+ +++SWT++I G A HG A A+ +F +M + G
Sbjct: 475 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 534
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + +VAVL+ACSH G+I + +FNSM K++GI P EHYA + DLLGR+G L EA
Sbjct: 535 KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 594
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI++M VW TLL ACRVH N EL AE I +P++ AY++LSN +A+A
Sbjct: 595 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 654
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+WKD +R M+ + + K CSWIEV+N+ + F G+ SHP +I + L +L +++
Sbjct: 655 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 714
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+PDT VLHD+EEEQK+ L+ HSE++A+ FG+I T IRI KNLRVCGDCHT
Sbjct: 715 EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHT 774
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+IS REI+VRD++RFHH ++G CSC DYW
Sbjct: 775 AIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 186/360 (51%), Gaps = 12/360 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W +I A+ G +A+++ M PD FT SSVL + + G
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA---RVEDSHRLFCLLPVKDAISWNSIIAGC 117
K++H IR GL +VC+G SL++MYAKCA V+DS ++F +P + +SW +II
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310
Query: 118 VQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
VQ+G D E ++ F +M+ I+P H SFSS++ AC +L+ + G+Q++ ++ G
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 370
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +SL+ MYA+ G + AR FD + ++VS+ A++ G A + + +A LF ++
Sbjct: 371 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 430
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ ++ F ++L+ + G + K + K G + A+ + R G ++
Sbjct: 431 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIE 489
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
A++ + M NV W ++++ H A ++ K+ PN + +LS
Sbjct: 490 AAFQVFNEME---DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 546
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 164/303 (54%), Gaps = 13/303 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSW+ ++ A N + +A+ M + P+ + ++V+ ++ G+ I+
Sbjct: 92 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151
Query: 65 GYAIRHG-LDANVCIGSSLINMYAK-CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ ++ G L+A+VC+G LI+M+ K + ++++F +P ++ ++W +I Q G
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 211
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + F M ++ P ++SS++ AC L L LGKQLH +IR G ++ + S
Sbjct: 212 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 271
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-HDAISLFEQMEKDG 238
L+DMYAKC G++ +R +F++M H+++SWTA+I G +AI LF +M
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH 331
Query: 239 VKPNSVAFVAVLTAC---SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++PN +F +VL AC S ++ +SY + GIA ++ + R+G++
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL----GIASVNCVGNSLISMYARSGRM 387
Query: 296 QEA 298
++A
Sbjct: 388 EDA 390
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 129/243 (53%), Gaps = 3/243 (1%)
Query: 20 GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
G A + + M N PD T S +L + + GK +H ++ GL+ + +
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 138
++LI++Y+KC E + +F + K D +SW+++++ N + + + F ML
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDNMFIASSLLDMYAK-CGNIRLA 196
P F++++ AC++ +G+ ++G +++ G+ + ++ + L+DM+ K G++ A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+FDKM ++V+WT +I A G A DAI LF ME G P+ + +VL+AC+
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244
Query: 257 GLI 259
GL+
Sbjct: 245 GLL 247
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/515 (42%), Positives = 338/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +++SW +I ++G +EA+ + +M + +++P+ F+ SSVL + D
Sbjct: 313 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 372
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++++ YA++ G+ + C+G+SLI+MYA+ R+ED+ + F +L K+ +S+N+I+ G +
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N +E F ++ I +F+S++ A + + G+Q+HG +++ G+ N I
Sbjct: 433 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 492
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY++CGNI A +F++M+ +++SWT++I G A HG A A+ +F +M + G
Sbjct: 493 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 552
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + +VAVL+ACSH G+I + +FNSM K++GI P EHYA + DLLGR+G L EA
Sbjct: 553 KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 612
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI++M VW TLL ACRVH N EL AE I +P++ AY++LSN +A+A
Sbjct: 613 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 672
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+WKD +R M+ + + K CSWIEV+N+ + F G+ SHP +I + L +L +++
Sbjct: 673 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 732
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+PDT VLHD+EEEQK+ L+ HSE++A+ FG+I T IRI KNLRVCGDCHT
Sbjct: 733 EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHT 792
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+IS REI+VRD++RFHH ++G CSC DYW
Sbjct: 793 AIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 186/360 (51%), Gaps = 12/360 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W +I A+ G +A+++ M PD FT SSVL + + G
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA---RVEDSHRLFCLLPVKDAISWNSIIAGC 117
K++H IR GL +VC+G SL++MYAKCA V+DS ++F +P + +SW +II
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328
Query: 118 VQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
VQ+G D E ++ F +M+ I+P H SFSS++ AC +L+ + G+Q++ ++ G
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 388
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +SL+ MYA+ G + AR FD + ++VS+ A++ G A + + +A LF ++
Sbjct: 389 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 448
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ ++ F ++L+ + G + K + K G + A+ + R G ++
Sbjct: 449 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIE 507
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
A++ + M NV W ++++ H A ++ K+ PN + +LS
Sbjct: 508 AAFQVFNEME---DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 564
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 164/303 (54%), Gaps = 13/303 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSW+ ++ A N + +A+ M + P+ + ++V+ ++ G+ I+
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169
Query: 65 GYAIRHG-LDANVCIGSSLINMYAK-CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ ++ G L+A+VC+G LI+M+ K + ++++F +P ++ ++W +I Q G
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 229
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + F M ++ P ++SS++ AC L L LGKQLH +IR G ++ + S
Sbjct: 230 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 289
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-HDAISLFEQMEKDG 238
L+DMYAKC G++ +R +F++M H+++SWTA+I G +AI LF +M
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH 349
Query: 239 VKPNSVAFVAVLTAC---SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++PN +F +VL AC S ++ +SY + GIA ++ + R+G++
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL----GIASVNCVGNSLISMYARSGRM 405
Query: 296 QEA 298
++A
Sbjct: 406 EDA 408
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 129/243 (53%), Gaps = 3/243 (1%)
Query: 20 GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
G A + + M N PD T S +L + + GK +H ++ GL+ + +
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 138
++LI++Y+KC E + +F + K D +SW+++++ N + + + F ML
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDNMFIASSLLDMYAK-CGNIRLA 196
P F++++ AC++ +G+ ++G +++ G+ + ++ + L+DM+ K G++ A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+FDKM ++V+WT +I A G A DAI LF ME G P+ + +VL+AC+
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262
Query: 257 GLI 259
GL+
Sbjct: 263 GLL 265
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/515 (43%), Positives = 328/515 (63%), Gaps = 13/515 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL----PIFADYVDVIKG 60
++VSW +I G +NG ++A+N+ QM +KP+ FT S++L P+F
Sbjct: 361 NVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVS------- 413
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+H I+ + + +G++L++ Y K D+ ++F ++ KD ++W++++AG Q
Sbjct: 414 -EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-HLGKQLHGCIIRNGFDDNMFI 179
G +E K F Q++ IKP +FSS++ ACA T GKQ H I+ ++ + +
Sbjct: 473 GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S+L+ MYAK GNI A +F + D+VSW ++I G + HG A A+ +F++M+K +
Sbjct: 533 SSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNM 592
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
++V F+ V+TAC+HAGL++K YFNSM D+ I P+ +HY+ + DL RAG L++A
Sbjct: 593 DVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAM 652
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I+ M P VW TLL A RVH+NVEL AEK+ + P + AYV+LSN YAAA
Sbjct: 653 GIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAG 712
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W++ ++R M + +KK P SWIEVKNK Y+F+AGD +HP ++I L EL R++
Sbjct: 713 NWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLK 772
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY PDTK V HD+E+EQK+ +L +HSERLAI FG+I TP I+I+KNLRVCGDCH
Sbjct: 773 DAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHN 832
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S + QR I+VRD++RFHHF+DG CSCGDYW
Sbjct: 833 FTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 149/252 (59%), Gaps = 1/252 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +++ G + NGLY + QM + P+ +T+S+V+ + V G
Sbjct: 154 MGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H ++HG + + + +SLI++Y++ + D+ +F + ++D ++WNS+IAG V+N
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F +M +A +KP H++F+S++ +CA L L L K + +++GF + +
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVI 333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ +KC + A +F M+ ++VSWTA+I G +G A++LF QM ++GV
Sbjct: 334 TALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGV 393
Query: 240 KPNSVAFVAVLT 251
KPN + A+LT
Sbjct: 394 KPNHFTYSAILT 405
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 165/313 (52%), Gaps = 3/313 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N ++ +R+ +EALN+ + + +L+PD TLS V I A +D G+++H ++
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
GL +V +G+SL++MY K V D R+F + ++ +SW S++AG NGL+ +
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F QM + P + S+++ A + + +G Q+H ++++GF++ + + +SL+ +Y++
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSR 241
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
G +R AR +FDKM++ D V+W ++I G +G + +F +M+ GVKP + F +V
Sbjct: 242 LGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASV 301
Query: 250 LTACSHAGLIDKAW-SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
+ +C A L + A G A+ L + ++ +A S M G
Sbjct: 302 IKSC--ASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEG 359
Query: 309 PTENVWLTLLSAC 321
W ++S C
Sbjct: 360 KNVVSWTAMISGC 372
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 159/304 (52%), Gaps = 11/304 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D V+WN++I G RNG E I +M +KP T +SV+ A ++
Sbjct: 255 MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALV 314
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
K + A++ G + + ++L+ +KC ++D+ LF L+ K+ +SW ++I+GC+Q
Sbjct: 315 KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQ 374
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH---LGKQLHGCIIRNGFDDN 176
NG D+ + F QM +KP H ++S+I+ T+H ++H +I+ ++ +
Sbjct: 375 NGGNDQAVNLFSQMRREGVKPNHFTYSAIL-------TVHYPVFVSEMHAEVIKTNYERS 427
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++LLD Y K GN A +F+ ++ D+++W+A++ G A G +A LF Q+ K
Sbjct: 428 SSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIK 487
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G+KPN F +V+ AC+ + F++ + + +A+ + + G +
Sbjct: 488 EGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNID 547
Query: 297 EAYE 300
A+E
Sbjct: 548 SAHE 551
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/515 (44%), Positives = 327/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
MP D SW +I G ++ EEAL + R M + K + T+SS L A +
Sbjct: 210 MPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHM 269
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+IHG+ +R GLD++ + SL++MY KC +E++ +F + +D +SW ++I ++
Sbjct: 270 GKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLK 329
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +EG FR ++ + I P +F+ ++ ACA L LGKQ+H ++R GFD
Sbjct: 330 NGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSA 389
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+ MY+KCG+I A+ +F+ + D+ SWT++++G A HG A+ FE + K G
Sbjct: 390 ASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGT 449
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ +AF+ VL+AC+HAGL+DK YF+S+ + +G+ + +HYA + DLL RAG+ EA
Sbjct: 450 KPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAE 509
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I+ M P + +W LL CR+H N+ELA + A+ +F I+P N YV L+N YA+A
Sbjct: 510 SIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAG 569
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+ A++R M ++G+ K P SWIE++ + + F GD SHP I E L EL +RM+
Sbjct: 570 MRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMK 629
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPDT VLHDVE EQK+ L YHSE+LA+ FGII TP GT I++ KNLR C DCH
Sbjct: 630 EVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHN 689
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFIS I R+IIVRD++RFH FE G CSC DYW
Sbjct: 690 AIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
++C + +I+ Y K E + LF +P +D SW +II+GCVQ+ +E L+ +R M
Sbjct: 183 DLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQ 242
Query: 135 IAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
K + SS + A A + +LH+GK++HG I+R G D + + SLLDMY KCG+I
Sbjct: 243 KHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSI 302
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
AR IFDKM+ D+VSWT +I +G + +LF + + PN F VL AC
Sbjct: 303 EEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNAC 362
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQEAYEFISNMHAGP 309
+ D A Y + F+ +++ A L + G ++ A + + + P
Sbjct: 363 A-----DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENA-KSVFEILPQP 416
Query: 310 TENVWLTLL 318
W +LL
Sbjct: 417 DLFSWTSLL 425
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
Q+L KP + +++ C L GKQ+H I +G ++I++ LLDMYAKCG
Sbjct: 109 QLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCG 167
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN--SVAFVAV 249
++ A +FD+M D+ SW +I G GN A +LF++M PN + ++ A+
Sbjct: 168 SLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM------PNRDNFSWTAI 221
Query: 250 LTACSHAGLIDKAWSYFNSMTK-DY 273
++ C ++A + M K DY
Sbjct: 222 ISGCVQHNRPEEALELYRLMQKHDY 246
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/509 (44%), Positives = 324/509 (63%), Gaps = 1/509 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSW ++I G +NG EALN+ ++M N+KPD L SV+ + + D+ +GK IHG
Sbjct: 166 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 225
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ GL+ I SL MYAK VE + F + + I WN++I+G NG +E
Sbjct: 226 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 285
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+K FR+M+ I+ ++ S + A A + +L L + L G I ++ + D+ F+ + L+D
Sbjct: 286 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 345
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG+I LARC+FD++ D+V W+ +IMG LHG+ +AI L+ +M++ GV PN
Sbjct: 346 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 405
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ +LTAC ++GL+ + W F+ M D+GI P +HY+ V DLLGRAG L +AY+FI +M
Sbjct: 406 FIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 464
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +VW LLSAC++H+ V L AE++F++DP N G YV LSN YA+A W A
Sbjct: 465 PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVA 524
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
++R+ M KG+ K S IE+ F GD+SHP I E L L +R++ GYVP
Sbjct: 525 NVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVP 584
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
+ VLHD+ E+ + L +HSERLA+ +GII T GTT+RI KNLR C +CH+AIK IS
Sbjct: 585 HMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLIS 644
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+V REII+RD RFHHF+DG CSCGD+W
Sbjct: 645 KLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 137/258 (53%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++ WN +I G + + + + + M + P+ FT VL GK+IH
Sbjct: 64 DILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIH 123
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++G +NV + +SL++MYAK ++ + +F L + +SW SII+G VQNG
Sbjct: 124 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM 183
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F++M +KP ++ S+M A ++ L GK +HG + + G + I SL
Sbjct: 184 EALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT 243
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAK G + +AR F++M+ +++ W A+I G A +G +AI LF +M ++ +S+
Sbjct: 244 TMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSI 303
Query: 245 AFVAVLTACSHAGLIDKA 262
+ + A + G ++ A
Sbjct: 304 TMRSAVLASAQVGSLELA 321
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
IN V +H+ F + D + WN+II G Q + D ++ + M I+++ P
Sbjct: 40 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPN 99
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+F ++ AC + +GKQ+HG + GF N+F+ +SL+ MYAK G I AR +FD
Sbjct: 100 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 159
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
K+ +VSWT++I G +G+ +A+++F++M + VKP+ +A V+V+TA ++ + +
Sbjct: 160 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 219
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
S +TK G+ + ++ + + G L E F N P +W ++S
Sbjct: 220 GKSIHGLVTK-LGLEFEPDIVISLTTMYAKRG-LVEVARFFFNRMEKPNLILWNAMISGY 277
Query: 322 RVH----KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR--RWKDA 364
+ + ++L ++ K +D M + V+ S + RW D
Sbjct: 278 ANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDG 326
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +L+ WN +I G A NG EEA+ + R+M N++ DS T+ S + A +
Sbjct: 262 MEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELA 321
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + GY + + + + LI+MYAKC + + +F + KD + W+ +I G +
Sbjct: 322 RWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLH 381
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + + +M A + P +F ++ AC + + G +L + +G + +
Sbjct: 382 GHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHY 441
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALH 221
S ++D+ + G + A M + VS W A++ +H
Sbjct: 442 SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 2/158 (1%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q++ +I +G F+ ++ G++ A F ++ DI+ W A+I G
Sbjct: 20 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
I ++ M+ V PN F+ VL AC ++ + T YG +
Sbjct: 80 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTS-VEGIGKQIHGQTFKYGFGSNVFVQ 138
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
++ + + G++ A +H T W +++S
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLH-DRTVVSWTSIISG 175
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/510 (43%), Positives = 329/510 (64%), Gaps = 3/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V++N +I G NG E +L++ +++ K S TL S++P+ + + IH
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA---IH 342
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY+++ ++ + ++L +Y+K +E + +LF P K SWN++I+G QNGL +
Sbjct: 343 GYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + FR+M ++ P V+ + I+ ACA L L LGK +H + F+ +++++++L+
Sbjct: 403 DAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I AR +FD M + V+W +I G LHG+ +A+++F +M G+ P V
Sbjct: 463 GMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPV 522
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL ACSHAGL+ + FNSM YG PS +HYA V D+LGRAG LQ A +FI
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEA 582
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +VW TLL ACR+HK+ LA V+EK+F +DP+N+G +V+LSN ++A R + A
Sbjct: 583 MPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQA 642
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A++R + + + K P + IE+ + F +GD+SHP I+E L++L +M + GY
Sbjct: 643 ATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQ 702
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T+ LHDVEEE+++ ++ HSERLAI FG+I T GT IRIIKNLRVC DCHTA K I
Sbjct: 703 PETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLI 762
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 763 SKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 172/341 (50%), Gaps = 14/341 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D + WNT+I G +N +Y E++ + R + N + + D+ TL +LP A+ ++
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +IH A + G ++ + + I++Y+KC +++ + LF D +++N++I G
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTS 299
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L F++++++ K + + S++P HL ++ +HG +++ F + +
Sbjct: 300 NGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTSV 356
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L +Y+K I AR +FD+ + SW A+I G +G DAISLF +M+
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEF 416
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V +L+AC+ G + + + + + S A+ + + G + EA
Sbjct: 417 SPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 300 EFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIF 338
M P +N W T++S +H + G+ A IF
Sbjct: 476 RLFDFM---PKKNEVTWNTMISGYGLHGH----GQEALTIF 509
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 139/257 (54%), Gaps = 2/257 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+ +N ++ G + N +L + + + +LKP+S T + + + + D G I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVI 141
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG AI G D+ + +GS+++ MY K RVED+ ++F +P KD I WN++I+G +N ++
Sbjct: 142 HGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 124 DEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E ++ FR ++ + + I+PA A L L LG Q+H + G + ++ +
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+ +Y+KCG I++A +F + DIV++ A+I G +G ++SLF+++ G K
Sbjct: 262 FISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLK 321
Query: 243 SVAFVAVLTACSHAGLI 259
S V+++ H LI
Sbjct: 322 SSTLVSLVPVSGHLMLI 338
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 138/252 (54%), Gaps = 4/252 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P L SWN +I G +NGL E+A+++ R+M N P+ T++ +L A + GK
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H ++++ + ++LI MYAKC + ++ RLF +P K+ ++WN++I+G +G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHG 500
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFIA 180
E L F +ML + I P V+F ++ AC+H + G ++ +I R GF+ ++
Sbjct: 501 HGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ ++D+ + G+++ A + M + S W ++ +H + + A ++ E++ + +
Sbjct: 561 ACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFE--L 618
Query: 240 KPNSVAFVAVLT 251
P++V + +L+
Sbjct: 619 DPDNVGYHVLLS 630
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+WNT+I G +G +EAL I +M N + P T VL + V +G
Sbjct: 481 MPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEG 540
Query: 61 KEIHGYAI-RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGC 117
EI I R+G + +V + ++++ + ++ + + +P++ S W +++ C
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGAC 599
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q H I+ +GF +++ + + L + G I AR IF + D+ + ++ G +++
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 223 NAHDAISLFEQMEKDG-VKPNSVAFVAVLTACS 254
+ H ++++F + K +KPNS + ++A S
Sbjct: 98 SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAAS 130
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/510 (43%), Positives = 331/510 (64%), Gaps = 1/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN++I +N +EA+ I ++M + +KP ++ L AD D+ +G+ IH
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ GLD NV + +SLI+MY KC V+ + +F L + +SWN++I G QNG
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L +F QM +KP ++ S++ A A L+ H K +HG ++R+ D N+F+ ++L+
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG I +AR IFD M + +W A+I G HG A+ LFE+M+K +KPN V
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++V++ACSH+GL++ F M ++Y I S +HY A+ DLLGRAG+L EA++FI
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P NV+ +L AC++HKNV A K AE++F ++P++ G +V+L+N Y AA W+
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKV 660
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+RV M +G++KTP CS +E+KN+ ++F +G +HP +I L++L+ +++ GYV
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT VL VE + K+ LL HSE+LAI FG++ T GTTI + KNLRVC DCH A K+I
Sbjct: 721 PDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REI+VRD RFHHF++G CSCGDYW
Sbjct: 780 SLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 155/262 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT++ G ++NG+ AL +V+ M NLKP T+ SVLP + + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYA+R G D+ V I ++L++MYAKC +E + +LF + ++ +SWNS+I VQN
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + F++ML +KP VS + ACA L L G+ +H + G D N+ +
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KC + A +F K+ +VSW A+I+G A +G DA++ F QM VK
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P++ +V+V+TA + + A
Sbjct: 436 PDTFTYVSVITAIAELSITHHA 457
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 156/256 (60%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V ++T++ G A+ ++AL +M +++P + + +L + D ++ GKEIHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G ++ + L NMYAKC +V ++ ++F +P +D +SWN+I+AG QNG+
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ + M +KP ++ S++PA + L + +GK++HG +R+GFD + I+++L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG++ AR +FD M ++VSW ++I + N +A+ +F++M +GVKP V+
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 247 VAVLTACSHAGLIDKA 262
+ L AC+ G +++
Sbjct: 341 MGALHACADLGDLERG 356
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 128/249 (51%), Gaps = 9/249 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I ++GL + L++++ + V+++ R+F + K + +++++ G +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D+ L+FF +M ++P +F+ ++ C L +GK++HG ++++GF ++F
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L +MYAKC + AR +FD+M D+VSW ++ G + +G A A+ + + M ++ +K
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQ 296
P+ + V+VL A S LI Y + F+ A+ D+ + G L+
Sbjct: 234 PSFITIVSVLPAVSALRLIS-----VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 297 EAYEFISNM 305
A + M
Sbjct: 289 TARQLFDGM 297
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/514 (42%), Positives = 327/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSW +I G A NG E+A + M ++PD T ++ A ++
Sbjct: 320 MKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA 379
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIH G ++ + ++L++MYAKC ++D+ ++F +P +D +SW+++I V+N
Sbjct: 380 REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVEN 439
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F M + I+P V++ +++ AC HL L +G +++ I+ ++ +
Sbjct: 440 GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLG 499
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ M AK G++ AR IFD M D+++W A+I G +LHGNA +A+ LF++M K+ +
Sbjct: 500 NALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFR 559
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PNSV FV VL+ACS AG +D+ +F + + GI P+ + Y + DLLGRAG+L EA
Sbjct: 560 PNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAEL 619
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M PT ++W +LL ACR+H N+++A + AE+ MIDP + YV LS+ YAAA
Sbjct: 620 LIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGM 679
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A +R M ++G++K C+WIEV K + FV D+SHP I L L+ +++
Sbjct: 680 WENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKR 739
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+P T+ VLHDV E+QK+ + YHSE+LAI +G++ P GT IRI KNLRVC DCH+A
Sbjct: 740 EGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSA 799
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ REII RD SRFHHF+DG CSCGDYW
Sbjct: 800 SKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 172/317 (54%), Gaps = 6/317 (1%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+WN +I G A+ G +EA + RQM + L+P T SVL + + GKE+H
Sbjct: 123 VVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHA 182
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ G ++ IG++L++MY K ++D+ ++F L ++D ++N ++ G ++G +++
Sbjct: 183 QVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEK 242
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F +M +KP +SF SI+ C L GK +H + G D++ +A+SL+
Sbjct: 243 AFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIR 302
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY CG+I AR +FD M + D+VSWT +I G A +GN DA LF M+++G++P+ +
Sbjct: 303 MYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRIT 362
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++ ++ AC+ + ++ A +S G A+ + + G +++A + M
Sbjct: 363 YMHIMNACAISANLNHA-REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAM 421
Query: 306 HAGPTENV--WLTLLSA 320
P +V W ++ A
Sbjct: 422 ---PRRDVVSWSAMIGA 435
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 146/269 (54%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D+ ++N ++ G A++G +E+A + +M V LKP+ + S+L + GK
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + GL ++ + +SLI MY C +E + R+F + V+D +SW +I G +NG
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGN 340
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++ F M I+P +++ IM ACA L+ +++H + GF ++ ++++
Sbjct: 341 IEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTA 400
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MYAKCG I+ AR +FD M D+VSW+A+I +G +A F M++ ++P+
Sbjct: 401 LVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPD 460
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
V ++ +L AC H G +D + K
Sbjct: 461 GVTYINLLNACGHLGALDVGMEIYTQAIK 489
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 186/398 (46%), Gaps = 47/398 (11%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
A ++++++G DS T + + D GK++ + I+ G N+ ++LI
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+Y+ C V ++ ++F + K ++WN++IAG Q G E FRQM+ ++P ++
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F S++ AC+ L+ GK++H ++ GF + I ++L+ MY K G++ AR +FD +
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA------------ 252
+ D+ ++ ++ G A G+ A LF +M++ G+KPN ++F+++L
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 253 ----CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL---------------GRAG 293
C +AGL+D S+ + Y S E V D + G
Sbjct: 281 VHAQCMNAGLVDDI-RVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339
Query: 294 KLQEAYEFISNMHA---GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
+++A+ + M P ++ +++AC + N+ A ++ + +D G ++
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQ---VDIAGFGTDLL 396
Query: 351 LSNT----YAAARRWKDAASLRVFMRNKGMKKTPACSW 384
+S YA KDA +VF M + SW
Sbjct: 397 VSTALVHMYAKCGAIKDAR--QVF---DAMPRRDVVSW 429
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 321/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++W T++ GL +NGL EAL++ R+M + D +T S+L +GK+IH
Sbjct: 245 DSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIH 304
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y IR D N+ +GS+L++MY+KC + + +F + K+ ISW ++I G QNG +
Sbjct: 305 AYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGE 364
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M IKP + S++ +CA+L +L G Q H + +G + ++S+L+
Sbjct: 365 EAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALV 424
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A +FD+M HD VS+TA++ G A G A + I LFE+M GVKPN V
Sbjct: 425 TLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGV 484
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACS +GL++K SYF+SM +D+GI +HY + DL R+G+L+EA EFI
Sbjct: 485 TFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQ 544
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLSACR+ ++E+ AE + DP N +YV+L + +A+ W +
Sbjct: 545 MPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEV 604
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR++ +KK P CSWI+ KN+ + F A D+SHPF I E L+ L +M +EGY
Sbjct: 605 ALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYK 664
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD VLHDV + +K ++L HSE+LAI FG+I P+ IR++KNLRVC DCH A KFI
Sbjct: 665 PDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFI 724
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R+I+VRD RFH F +G CSCGD+W
Sbjct: 725 SKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 49/348 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNG------------LYEEALNIVRQMGNVNLKPDSFTLSSVL 48
MP D VS+N +I G + G L EEA+ + ++P T+S ++
Sbjct: 102 MPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAV-----VDGARVRPSRITMSGMV 156
Query: 49 PIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--- 105
+ D G+++H +R G A S L++MYAK + D+ R+F + VK
Sbjct: 157 MAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVV 216
Query: 106 ----------------------------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
D+I+W +++ G QNGL E L FR+M
Sbjct: 217 MYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEG 276
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ +F SI+ AC L GKQ+H IR +D N+F+ S+L+DMY+KC +IRLA
Sbjct: 277 VGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAE 336
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+F +M +I+SWTA+I+G +G +A+ +F +M+ DG+KPN +V+++C++
Sbjct: 337 AVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLA 396
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+++ + F+ M G+ P +A+ L G+ G +++A+ M
Sbjct: 397 SLEEG-AQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM 443
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 123/231 (53%), Gaps = 14/231 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +IVG +NG EEA+ + +M +KP+ FTL SV+ A+ + +G
Sbjct: 342 MTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEG 401
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H A+ GL + + S+L+ +Y KC +ED+HRLF +P D +S+ ++++G Q
Sbjct: 402 AQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQF 461
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-------LTTLHLGKQLHGCIIRNGF 173
G E + F +ML+ +KP V+F ++ AC+ + H +Q HG ++
Sbjct: 462 GKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL---L 518
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGN 223
DD+ + ++D+Y++ G ++ A +M D + W ++ L G+
Sbjct: 519 DDHY---TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGD 566
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 38/219 (17%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG----CVQNGLFDEGLK 128
D N+ ++L++ A + D RLF +P +DA+S+N++IAG
Sbjct: 73 DPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRA 132
Query: 129 FFRQMLI---AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
R+ + A+++P ++ S ++ A + L LG+Q+H I+R GF F S L+D
Sbjct: 133 LLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVD 192
Query: 186 MYAKCGNIRLARCIFDKMDLHDIV-------------------------------SWTAV 214
MYAK G I A+ +FD+M + ++V +WT +
Sbjct: 193 MYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTM 252
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+ G +G +A+ +F +M +GV + F ++LTAC
Sbjct: 253 VTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTAC 291
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 323/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN +I G A+NG +ALN+ QM L PD FT+ S+L A + G
Sbjct: 297 METKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYG 356
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+HG+ +RHGL+ + IG SL+++Y C + LF + K ++SWN++I+G QN
Sbjct: 357 KEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQN 416
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++ L FR+++ +P ++ S++ AC+ + L LGK+ H ++ +++F+A
Sbjct: 417 GLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVA 476
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S +DMYAK G I+ +R +FD + D+ SW A+I +HG+ ++I LFE+M K G
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQM 536
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +LT CSHAGL+++ YFN M +GI P EHYA V D+LGRAG+L +A
Sbjct: 537 PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALR 596
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M P VW +LLS CR +E+ VAEK+ ++P N+ YV LSN YA + R
Sbjct: 597 LVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGR 656
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D +R +++ G++K CSWIE+ K ++FVAGD P ++ ++L ++M +
Sbjct: 657 WDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCK 716
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P+T VLHDV+EE+K L HSE+LAI FG++ T GTT+RI KNLR+C DCH A
Sbjct: 717 IGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNA 776
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S++ REII+RDN RFHHF+DG CSCGDYW
Sbjct: 777 SKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 151/258 (58%), Gaps = 3/258 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV +LVSWN++I G + NG ++ +++ +M G L PD TL +VLP+ A VDV
Sbjct: 92 MPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQ 151
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G IHG A++ GL +V + +SL++MY+KC + ++ LF K+A+SWN++I G
Sbjct: 152 MGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLC 211
Query: 119 QNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
G E FR+M + + I+ V+ +I+PAC ++ L K+LHG IR+GF +
Sbjct: 212 TKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDE 271
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+A+ + YAKCG + A +F M+ + SW A+I G A +G+ A++L+ QM
Sbjct: 272 LVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYS 331
Query: 238 GVKPNSVAFVAVLTACSH 255
G+ P+ ++L A +H
Sbjct: 332 GLVPDWFTIGSLLLASAH 349
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 164/318 (51%), Gaps = 18/318 (5%)
Query: 14 VGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL 72
V + RN LY +A+++ V+ + + D+FT V+ +D G+ IHG I+ GL
Sbjct: 3 VAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGL 62
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+V +G++LI MY K V+ + ++F +PV++ +SWNSII+G +NG + +
Sbjct: 63 LLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVE 122
Query: 133 MLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
M+ + + P + +++P CA + +G ++HG ++ G +++ + +SL+DMY+KC
Sbjct: 123 MMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC 182
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVKPNSVAFVAV 249
G + A+ +FDK + + VSW +I G G +A +LF +M+ ++ ++ N V + +
Sbjct: 183 GYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNI 242
Query: 250 LTACSHAGLIDKAWSYFNSMTK--DYGIAPSFEHYAAVAD----LLGRAGKLQEAYEFIS 303
L AC S S+ + Y I F++ VA+ + G L A
Sbjct: 243 LPACLEI-------SQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFY 295
Query: 304 NMHAGPTENVWLTLLSAC 321
+M T N W L+ C
Sbjct: 296 SMET-KTVNSWNALIGGC 312
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/514 (41%), Positives = 328/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SW ++I G +NGL +A++I R+M NL+ D +T SVL + + +G
Sbjct: 235 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y IR N+ + S+L++MY KC ++ + +F + K+ +SW +++ G QN
Sbjct: 295 KQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E +K F M I+P + S++ +CA+L +L G Q H + +G + ++
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVS 414
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG+I + +F+++ D V+WTA++ G A G A++ I LFE M G+K
Sbjct: 415 NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLK 474
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+ VL+ACS AGL++K F SM ++GI P +HY + DL RAG+++EA
Sbjct: 475 PDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARN 534
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI+ M P W TLLS+CR + N+++ AE + +DP+N +YV+LS+ YAA +
Sbjct: 535 FINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGK 594
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A LR MR+KG++K P CSWI+ KN+ + F A DKS+PF +I L++L +M +
Sbjct: 595 WEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIK 654
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VLHDV + +K +L +HSE+LAI FG++ P G IR++KNLRVC DCH A
Sbjct: 655 EGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 714
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKI REI+VRD +RFH F+DG CSCGD+W
Sbjct: 715 TKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 190/356 (53%), Gaps = 41/356 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN----IVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
MP D VSWN++I G A GL +++ +++ G+ NL +F S L I A
Sbjct: 101 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITF---STLLILASKRG 157
Query: 57 VIK-GKEIHGYAIRHGLDANVCIGSSLINMYAK--------------------------- 88
+K G++IHG+ ++ G + V +GS L++MY+K
Sbjct: 158 CVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 217
Query: 89 ----CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
C RVEDS RLF + +D+ISW S+I G QNGL + + FR+M + ++ +
Sbjct: 218 GLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYT 277
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F S++ AC + L GKQ+H IIR + DN+F+AS+L+DMY KC NI+ A +F KM
Sbjct: 278 FGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMT 337
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++VSWTA+++G +G + +A+ F M+K G++P+ +V+++C++ +++ +
Sbjct: 338 CKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG-A 396
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
F++ G+ A+ L G+ G +++++ + + + E W L+S
Sbjct: 397 QFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI-SFKDEVTWTALVSG 451
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 107/193 (55%), Gaps = 8/193 (4%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI--AK 137
+++++ Y+K RV + LF +P +D +SWNS+I+G GL + +K + ML
Sbjct: 79 NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
++FS+++ + + LG+Q+HG +++ GF +F+ S L+DMY+K G I AR
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHA 256
+FD++ ++V + +IMG G D+ LF +M E+D S+++ +++T +
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERD-----SISWTSMITGFTQN 253
Query: 257 GLIDKAWSYFNSM 269
GL A F M
Sbjct: 254 GLDRDAIDIFREM 266
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ +++ C K LH II+ F+ ++L+ YAK G+I A +FD+M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++ SW ++ + G + LF+ M +DGV NS +++ + GLI ++
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNS-----LISGYAGCGLIYQSV 126
Query: 264 SYFNSMTKDYG 274
+N M K+ G
Sbjct: 127 KAYNLMLKNDG 137
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 334/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
M D SW ++ G + EEAL + M V N +P+ FT+S + A + +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHG+ +R GLD++ + SSL++MY KC ++++ +F + KD +SW S+I +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + EG F +++ + +P +F+ ++ ACA LTT LGKQ+HG + R GFD F
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SSL+DMY KCGNI A+ + D D+VSWT++I G A +G +A+ F+ + K G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V FV VL+AC+HAGL++K +F S+T+ + ++ + +HY + DLL R+G+ ++
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
IS M P++ +W ++L C + N++LA + A+++F I+P N YV ++N YAAA
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ +R M+ G+ K P SW E+K K + F+A D SHP Y++I E L+EL ++M+
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGYVP T VLHDVE+EQK+ L YHSE+LA+ F I+ T +GT I++ KNLR C DCH
Sbjct: 597 EEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHG 656
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFIS I +R+I VRD++RFH FE+G+CSCGDYW
Sbjct: 657 AIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 45/352 (12%)
Query: 12 VIVGLARNGLYEEALNI----------VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
V+ L R + EA+++ V+ +G KP + T +++ + + + +GK
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAK-KPPASTYCNLIQVCSQTRALEEGK 105
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP------------------ 103
++H + G + I + L+ MYAKC + D+ ++F +P
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165
Query: 104 -------------VKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIM 149
KD+ SW +++ G V+ +E L + M + +P + S +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
A A + + GK++HG I+R G D + + SSL+DMY KCG I AR IFDK+ D+V
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SWT++I + SLF ++ +PN F VL AC+ + M
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
T+ G P +++ D+ + G ++ A + P W +L+ C
Sbjct: 346 TR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC-PKPDLVSWTSLIGGC 395
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 126 GLKFFR---QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
G K R Q+L KP ++ +++ C+ L GK++H I +GF + I +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKP 241
LL MYAKCG++ AR +FD+M D+ SW ++ G A G +A LF++M EKD
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD---- 181
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP-----SFEHYAAVADLLGRAGKLQ 296
S ++ A++T ++A ++ M + P S AA A R GK
Sbjct: 182 -SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK-- 238
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
E + I E +W +L+ ++ A + +KI D + ++ + + Y
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD---VVSWTSMIDRYF 295
Query: 357 AARRWKDAASL 367
+ RW++ SL
Sbjct: 296 KSSRWREGFSL 306
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 324/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSWN +I G A+NG EAL + +M + ++ + L + + +G
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +R GLD+NV + ++LI MY+KC RV+ + +F L + +SWN++I GC QN
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ ++ F +M + +KP + S++PA A ++ + +HG IR D ++++
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + +AR +F+ +++W A+I G HG A+ LFE+M+ G+
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN F++VL+ACSHAGL+D+ YF SM +DYG+ P EHY + DLLGRAGKL EA+
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +V+ +L AC++HKNVELA + A+KIF + P +V+L+N YA A
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD A +R M G++KTP S I++KN+ + F +G +H I L +L+E ++
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT + HDVE++ K LL HSE+LAI FG+I T GTTI+I KNLRVC DCH A
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K IS + REII+RD RFHHF+DGKCSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 150/253 (59%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MPV D V+WN ++ G ARNGL A+ +VR +PDS TL SVLP A+ +
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+E H +AIR GL+ V + +++++ Y KC + + +F +P K+++SWN++I G Q
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L F +M+ + VS + + AC L L G ++H ++R G D N+ +
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY+KC + LA +FD++D VSW A+I+G A +G + DA+ LF +M+ + V
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359
Query: 240 KPNSVAFVAVLTA 252
KP+S V+V+ A
Sbjct: 360 KPDSFTLVSVIPA 372
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 139/238 (58%), Gaps = 1/238 (0%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
AL M + P T +S+L + A D+ G+ +H G+D+ ++L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHV 143
MYAKC R D+ R+F +PV+D ++WN+++AG +NGL ++ +M + +P +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ S++PACA+ L ++ H IR+G ++ + +A+++LD Y KCG+IR AR +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+ VSW A+I G A +G++ +A++LF +M ++GV V+ +A L AC G +D+
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 324/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSWN +I G A+NG EAL + +M + ++ + L + + +G
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +R GLD+NV + ++LI MY+KC RV+ + +F L + +SWN++I GC QN
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ ++ F +M + +KP + S++PA A ++ + +HG IR D ++++
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + +AR +F+ +++W A+I G HG A+ LFE+M+ G+
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN F++VL+ACSHAGL+D+ YF SM +DYG+ P EHY + DLLGRAGKL EA+
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +V+ +L AC++HKNVELA + A+KIF + P +V+L+N YA A
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD A +R M G++KTP S I++KN+ + F +G +H I L +L+E ++
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT + HDVE++ K LL HSE+LAI FG+I T GTTI+I KNLRVC DCH A
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K IS + REII+RD RFHHF+DGKCSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 150/253 (59%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MPV D V+WN ++ G ARNGL A+ +VR +PDS TL SVLP A+ +
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+E H +AIR GL+ V + +++++ Y KC + + +F +P K+++SWN++I G Q
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L F +M+ + VS + + AC L L G ++H ++R G D N+ +
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY+KC + LA +FD++D VSW A+I+G A +G + DA+ LF +M+ + V
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359
Query: 240 KPNSVAFVAVLTA 252
KP+S V+V+ A
Sbjct: 360 KPDSFTLVSVIPA 372
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 139/238 (58%), Gaps = 1/238 (0%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
AL M + P T +S+L + A D+ G+ +H G+D+ ++L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHV 143
MYAKC R D+ R+F +PV+D ++WN+++AG +NGL ++ +M + +P +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ S++PACA+ L ++ H IR+G ++ + +A+++LD Y KCG+IR AR +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+ VSW A+I G A +G++ +A++LF +M ++GV V+ +A L AC G +D+
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/522 (44%), Positives = 337/522 (64%), Gaps = 12/522 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V+W+ VI G A+ GL EAL++ RQM +P+ TL S+L A ++ GKE H
Sbjct: 331 NVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETH 390
Query: 65 GYAIRH--GLDAN-----VCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSIIA 115
+AI+ LD N + + ++LI+MY+KC + + +F L+P KD ++W +I
Sbjct: 391 CHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIG 450
Query: 116 GCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
G Q+G +E L+ F QML + P + S + ACA L L G+Q+H ++RN F
Sbjct: 451 GNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRF 510
Query: 174 DDNM-FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+ M F+A+ L+DMY+K G++ AR +FD M + VSWT+++ G +HG +A+ +F
Sbjct: 511 ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFY 570
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M+K G+ P+ V FV VL ACSH+G++D+ +YFN M KD+G+ P EHYA + DLL RA
Sbjct: 571 EMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRA 630
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G+L EA E I M PT VW+ LLSACRV+ NVEL A ++ ++ N G+Y +LS
Sbjct: 631 GRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLS 690
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA AR WKD A +R M+N G+KK P CSW++ + F AGD SHP +I + L+
Sbjct: 691 NIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLR 750
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+L++R++ GYVPD + LHDV++E+K +LL HSE+LA+ +GI+ T G IRI KNLR
Sbjct: 751 DLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLR 810
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CGDCH+A +IS I++ EIIVRD+SRFHHF++G CSC YW
Sbjct: 811 ACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 62/404 (15%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGK 61
V DLVSWN+++ + G A+ + +M ++ ++PD+ +L +VLP A +GK
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++HGYA+R GL +V +G+++++MYAKC +E+++++F + VKD +SWN+++ G Q G
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311
Query: 122 LFD-----------------------------------EGLKFFRQMLIAKIKPRHVSFS 146
FD E L FRQM + +P V+
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371
Query: 147 SIMPACAHLTTLHLGKQLHGCIIR-------NGFDDNMFIASSLLDMYAKCGNIRLARCI 199
S++ CA TL GK+ H I+ N D++ + ++L+DMY+KC + + AR +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431
Query: 200 FDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEK--DGVKPNSVAFVAVLTACSH 255
FD + D +V+WT +I GNA HG A++A+ LF QM + + V PN+ L AC+
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYA-----AVADLLGRAGKLQEAYEFISNMHAGPT 310
G + F Y + FE + D+ ++G + A NMH
Sbjct: 492 LGALR-----FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNG 546
Query: 311 ENVWLTLLSACRVHKNVELAGKV---AEKIFMIDPNNMGAYVIL 351
+ W +L++ +H E A ++ +K+ ++ P+ + V+L
Sbjct: 547 VS-WTSLMTGYGMHGRGEEALQIFYEMQKVGLV-PDGVTFVVVL 588
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 146/265 (55%), Gaps = 4/265 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN +I G E+ L + R+M + +PD +T VL + G +H
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL---PVKDAISWNSIIAGCVQNGLFDE 125
G + NV +G+ L++MY +C E++ ++F + V D +SWNSI+A +Q G
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 126 GLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+K F +M I+P VS +++PACA + GKQ+HG +R+G +++F+ ++++
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + A +F++M + D+VSW A++ G + G DA+ LFE++ ++ ++ N V
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSM 269
+ AV+ + GL +A F M
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQM 358
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/549 (40%), Positives = 331/549 (60%), Gaps = 40/549 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW +I G A+NG EEAL +++++ + P +L+S+ ++ V + G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H A++ G N ++LI MY KC +E + ++F + KD +SWNS +A VQN
Sbjct: 439 TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN 498
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-------------------------L 155
L DE F ML VS+++I+ A AH L
Sbjct: 499 DLLDEARNTFDNML----SRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPIL 554
Query: 156 TTL----------HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
T L +G+Q+H I+ G D + +A++L+ MY KCG +R IFD M+
Sbjct: 555 TILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEE 613
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
DI +W +I G A HG +AI +++ ME GV PN V FV +L ACSHAGL+D+ W +
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKF 673
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F SM++DYG+ P EHYA + DLLGR G +Q A +FI +M P +W LL AC++HK
Sbjct: 674 FKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHK 733
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N E+ + AEK+F I+P+N G YV+LSN Y++ W + A +R M+ +G+ K P CSW
Sbjct: 734 NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
++K+K ++FV GDK H I L+EL ++ GYVPDT+ VLHD++EEQK++ L Y
Sbjct: 794 QIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLY 853
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LA+ + ++ TP G I+I+KNLR+CGDCHT IKF+S + +R+I +RD +RFHHF +
Sbjct: 854 HSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRN 913
Query: 506 GKCSCGDYW 514
G CSC D+W
Sbjct: 914 GSCSCEDFW 922
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++LI Y + V ++ LF +P ++ ISW +IAG QNG +E L +++ + +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P S +SI AC+++ L G Q+H ++ G N F ++L+ MY KC N+ AR +
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F +M DIVSW + + + +A + F+ M + + V++ +++A +HA
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQS 532
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++A F +M ++ + S + LLG G L
Sbjct: 533 NEAMGAFKTMFCEHELPNS----PILTILLGVCGSL 564
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 157/388 (40%), Gaps = 85/388 (21%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+++WN++I NG+ + A ++ + N++ + LS + G
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRL---------G 110
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + + G L+ N +++I+ Y + + + RLF +P +D SWNS++ G
Sbjct: 111 RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170
Query: 120 N-------GLFD------------------------EGLKFFRQMLIAKIKPRHVSFSSI 148
+ LF+ + F +M + P +F+S
Sbjct: 171 SLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASA 230
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------------------- 189
+ A L L + + L ++ GF+ ++ I +++L++Y++
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290
Query: 190 -------------CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
G I A ++++ + I TA+I G A G DA LFEQ+
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIP- 349
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+P V++ A++T G++++A F+ M I+ +A + + G+ +
Sbjct: 350 ---EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS-----WAGMIAGYAQNGRSE 401
Query: 297 EAYEFISNMHAG---PTENVWLTLLSAC 321
EA + +H P+ + ++ AC
Sbjct: 402 EALGLLQELHRSGMLPSLSSLTSIFFAC 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 66 YAIRHG---LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+A+RH L+ + C S+ I + RV ++ +F +P +D I+WNS+I+ NG+
Sbjct: 23 FAVRHAHGELEVSGC--SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGM 80
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIAS 181
D + + ++ + S LG+ L + +G + N +
Sbjct: 81 PDAARDLYDAISGGNMRTGAILLSGYG---------RLGRVLEARRVFDGMLERNTVAWN 131
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+++ Y + G+I +AR +FD M D+ SW +++ G DA +LFE+M +
Sbjct: 132 AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPER---- 187
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
N V++ +++ KAW F M ++ G+ P ++A+ + G L
Sbjct: 188 NLVSWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNL 240
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/549 (40%), Positives = 331/549 (60%), Gaps = 40/549 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW +I G A+NG EEAL +++++ + P +L+S+ ++ V + G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H A++ G N ++LI MY KC +E + ++F + KD +SWNS +A VQN
Sbjct: 439 TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN 498
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-------------------------L 155
L DE F ML VS+++I+ A AH L
Sbjct: 499 DLLDEARNTFDNML----SRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPIL 554
Query: 156 TTL----------HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
T L +G+Q+H I+ G D + +A++L+ MY KCG +R IFD M+
Sbjct: 555 TILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEE 613
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
DI +W +I G A HG +AI +++ ME GV PN V FV +L ACSHAGL+D+ W +
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKF 673
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F SM++DYG+ P EHYA + DLLGR G +Q A +FI +M P +W LL AC++HK
Sbjct: 674 FKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHK 733
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N E+ + AEK+F I+P+N G YV+LSN Y++ W + A +R M+ +G+ K P CSW
Sbjct: 734 NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
++K+K ++FV GDK H I L+EL ++ GYVPDT+ VLHD++EEQK++ L Y
Sbjct: 794 QIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLY 853
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LA+ + ++ TP G I+I+KNLR+CGDCHT IKF+S + +R+I +RD +RFHHF +
Sbjct: 854 HSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRN 913
Query: 506 GKCSCGDYW 514
G CSC D+W
Sbjct: 914 GSCSCEDFW 922
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++LI Y + V ++ LF +P ++ ISW +IAG QNG +E L +++ + +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P S +SI AC+++ L G Q+H ++ G N F ++L+ MY KC N+ AR +
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F +M DIVSW + + + +A + F+ M + + V++ +++A +HA
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQS 532
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++A F +M ++ + S + LLG G L
Sbjct: 533 NEAMGAFKTMFCEHELPNS----PILTILLGVCGSL 564
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 157/388 (40%), Gaps = 85/388 (21%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+++WN++I NG+ + A ++ + N++ + LS + G
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRL---------G 110
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + + G L+ N +++I+ Y + + + RLF +P +D SWNS++ G
Sbjct: 111 RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170
Query: 120 N-------GLFD------------------------EGLKFFRQMLIAKIKPRHVSFSSI 148
+ LF+ + F +M + P +F+S
Sbjct: 171 SLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASA 230
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------------------- 189
+ A L L + + L ++ GF+ ++ I +++L++Y++
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290
Query: 190 -------------CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
G I A ++++ + I TA+I G A G DA LFEQ+
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIP- 349
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+P V++ A++T G++++A F+ M I+ +A + + G+ +
Sbjct: 350 ---EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS-----WAGMIAGYAQNGRSE 401
Query: 297 EAYEFISNMHAG---PTENVWLTLLSAC 321
EA + +H P+ + ++ AC
Sbjct: 402 EALGLLQELHRSGMLPSLSSLTSIFFAC 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 66 YAIRHG---LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+A+RH L+ + C S+ I + RV ++ +F +P +D I+WNS+I+ NG+
Sbjct: 23 FAVRHAHGELEVSGC--SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGM 80
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIAS 181
D + + ++ + S LG+ L + +G + N +
Sbjct: 81 PDAARDLYDAISGGNMRTGAILLSGYG---------RLGRVLEARRVFDGMLERNTVAWN 131
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+++ Y + G+I +AR +FD M D+ SW +++ G DA +LFE+M +
Sbjct: 132 AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPER---- 187
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
N V++ +++ KAW F M ++ G+ P ++A+ + G L
Sbjct: 188 NLVSWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNL 240
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/523 (42%), Positives = 331/523 (63%), Gaps = 13/523 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W VI G A+ G EAL++ RQM + +P+ TL S+L ++ GKE H
Sbjct: 464 DVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETH 523
Query: 65 GYAIRHGLDAN--------VCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSII 114
YAI+ L+ + + + + LI+MYAKC E + ++F + KD ++W +I
Sbjct: 524 CYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMI 583
Query: 115 AGCVQNGLFDEGLKFFRQM--LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
G Q+G + L+ F M + IKP + S + ACA L L G+Q+H ++RN
Sbjct: 584 GGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNF 643
Query: 173 FDDNM-FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ M F+A+ L+DMY+K G++ A+ +FD M + VSWT+++ G +HG DA+ +F
Sbjct: 644 YGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVF 703
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
++M K + P+ + F+ VL ACSH+G++D ++FN M+KD+G+ P EHYA + DL GR
Sbjct: 704 DEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGR 763
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG+L EA + I+ M PT VW+ LLSACR+H NVEL A ++ ++ N G+Y +L
Sbjct: 764 AGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLL 823
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN YA ARRWKD A +R M+ G+KK P CSWI+ + F GD+SHP +I E L
Sbjct: 824 SNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETL 883
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
+L++R++ GYVP T LHDV++E+K +LL+ HSE+LA+ +GI+ IRI KNL
Sbjct: 884 ADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNL 943
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R+CGDCH+AI +ISKI++ EII+RD+SRFHHF++G CSC YW
Sbjct: 944 RICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 55/401 (13%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGK 61
+ DLVSWN+V+ AL + +M +L PD +L ++LP A ++G+
Sbjct: 325 IQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGR 384
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++HG++IR GL +V +G+++++MYAKC ++E+++++F + KD +SWN+++ G Q G
Sbjct: 385 QVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAG 444
Query: 122 -------LFD----------------------------EGLKFFRQMLIAKIKPRHVSFS 146
LF+ E L FRQM +P V+
Sbjct: 445 RLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLV 504
Query: 147 SIMPACAHLTTLHLGKQLHGCIIR-----NGFD---DNMFIASSLLDMYAKCGNIRLARC 198
S++ AC + L GK+ H I+ +G D D++ + + L+DMYAKC + +AR
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARK 564
Query: 199 IFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEK--DGVKPNSVAFVAVLTACS 254
+FD + D+V+WT +I G A HG+A++A+ LF M K +KPN L AC+
Sbjct: 565 MFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACA 624
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV- 313
+ + +++ + + D+ ++G + A NM P N
Sbjct: 625 RLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNM---PQRNAV 681
Query: 314 -WLTLLSACRVHKNVELAGKVAEKIFMID--PNNMGAYVIL 351
W +L++ +H E A +V +++ + P+ + V+L
Sbjct: 682 SWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 5/279 (1%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S + WN +I G + + RQM ++ PD +T V A+ + G +
Sbjct: 222 SSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASL 281
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGCVQN 120
H R G +NV + +++++MY KC + +H +F C ++D +SWNS+++ +
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 121 GLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ L F +M + P +S +I+PACA L G+Q+HG IR+G D++F+
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++DMYAKCG + A +F +M D+VSW A++ G + G A+SLFE+M ++ +
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ + V + AV+T + G +A F M D G P+
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMC-DCGSRPN 499
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 19/257 (7%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA--ISWNSIIAGC 117
K +H +I GL + + ++LI Y + L LP + WN +I
Sbjct: 177 AKLLHQQSIMQGLLFH--LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRA 234
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ G + +RQM P H +F + ACA+L++L LG LH + R+GF N+
Sbjct: 235 LHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNV 294
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKM---DLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
F+ ++++ MY KCG +R A +FD + + D+VSW +V+ +A+ A++LF +M
Sbjct: 295 FVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKM 354
Query: 235 E-KDGVKPNSVAFVAVLTAC-----SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+ + P+ ++ V +L AC S G +S + + D + AV D+
Sbjct: 355 TTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVG------NAVVDM 408
Query: 289 LGRAGKLQEAYEFISNM 305
+ GK++EA + M
Sbjct: 409 YAKCGKMEEANKVFQRM 425
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW +++ G +G E+AL + +M V L PD T VL Y G
Sbjct: 675 MPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL-----YACSHSG 729
Query: 61 KEIHG--YAIRHGLDANVCIG----SSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSI 113
HG + R D V G + +++++ + R+ ++ +L +P++ + W ++
Sbjct: 730 MVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVAL 789
Query: 114 IAGC 117
++ C
Sbjct: 790 LSAC 793
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/506 (42%), Positives = 323/506 (63%), Gaps = 1/506 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+W +I G ++N +AL + QM + +P+ FTLSS+L + G
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPG 208
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H + +++G ++V +GS+L++MYA+C ++ + F +P K +SWN++I+G +
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L +M +P H ++SS++ ACA + L GK +H +I++G FI
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G+I A+ +FD++ D+VSW ++ G A HG + + FEQM + G++
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++F+ VLTACSH+GL+D+ YF M K Y + P HY DLLGR G L A
Sbjct: 389 PNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL ACR+HKN+EL AE+ F +DP++ G ++LSN YA+A R
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A +R M+ G+KK PACSW+E++N + FVA D++HP I +E+ ++++
Sbjct: 508 WRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKE 567
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL V++++++ L YHSE+LA+ F ++ TP G+ IRI KN+RVCGDCH A
Sbjct: 568 IGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAA 627
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDG 506
IKF+SK+V REIIVRD +RFH F DG
Sbjct: 628 IKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 162/307 (52%), Gaps = 10/307 (3%)
Query: 20 GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI-RHGLDANVCI 78
GLY AL+++ Q G+ L PD S +L V +G+ +H + + H LD ++ +
Sbjct: 71 GLY--ALDLI-QRGS--LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125
Query: 79 GSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 138
+ ++NMYAKC ++D+ R+F +P KD ++W ++IAG QN + L F QML
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGF 185
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
+P H + SS++ A L G QLH ++ G+ ++++ S+L+DMYA+CG++ A+
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQL 245
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
FD M VSW A+I G+A G A+ L +M++ +P + +VL+AC+ G
Sbjct: 246 AFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGA 305
Query: 259 IDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTL 317
+++ W + + + + + + D+ +AG + +A + P W T+
Sbjct: 306 LEQGKWVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTM 362
Query: 318 LSACRVH 324
L+ C H
Sbjct: 363 LTGCAQH 369
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/510 (43%), Positives = 325/510 (63%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW +I G A++ L+ EAL ++M N ++ D+ SS + A + +G++IH
Sbjct: 480 DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIH 539
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G ++ IG++L+++YA+C R+++++ F + KD+ISWN +I+G Q+G +
Sbjct: 540 AQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCE 599
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ LK F QM AK++ +F S + A A++ + GKQ+H II+ GFD ++ ++++L+
Sbjct: 600 DALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALI 659
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
YAKCG+I AR F +M + VSW A+I G + HG ++A++LFE+M++ G PN V
Sbjct: 660 TFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHV 719
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL+ACSH GL+ K YF SM+K++G+ P HYA V DL+ RAG L A +FI
Sbjct: 720 TFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEE 779
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W TLLSAC VHKNVE+ A+ + ++P + YV+LSN YA + +W
Sbjct: 780 MPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCR 839
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R MRN+G+KK P SWIEVKN +AF GD+ HP +I E L EL ++ + GY
Sbjct: 840 DQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYF 899
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D +L+DVE+EQK +Y HSE+LAI FG++ D I ++KNLRVC DCH+ IKF+
Sbjct: 900 QDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFV 959
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R IIVRD RFHHFE G CSC DYW
Sbjct: 960 SKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VS+N++I GLA+ G + AL + +M LKPD T++S+L A + KG
Sbjct: 274 MQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKG 333
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y I+ G+ +++ + +L+++Y C+ ++ +H +F ++ + WN ++ +
Sbjct: 334 EQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKL 393
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + FRQM I + P ++ SI+ C + L LG+Q+H +I+ GF N+++
Sbjct: 394 DNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVC 453
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAK G + A I + D+VSWTA+I G A H +A+ F++M G++
Sbjct: 454 SVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQ 513
Query: 241 PNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+++ F + ++AC+ +++ A SY + ++D I A+ L R G++
Sbjct: 514 SDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN------ALVSLYARCGRI 567
Query: 296 QEAY 299
+EAY
Sbjct: 568 KEAY 571
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 185/381 (48%), Gaps = 8/381 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V WN ++V + E+ I RQM L P+ FT S+L + G++IH
Sbjct: 379 NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIH 438
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ G NV + S LI+MYAK +++ +H + L D +SW ++I+G Q+ LF
Sbjct: 439 TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFA 498
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E LK F++ML I+ ++ FSS + ACA + L+ G+Q+H +G+ +++ I ++L+
Sbjct: 499 EALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALV 558
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+YA+CG I+ A F+K+D D +SW +I G A G DA+ +F QM + ++ +
Sbjct: 559 SLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFF 618
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F + ++A ++ I K ++M G E A+ + G +++A
Sbjct: 619 TFGSAVSAAANIANI-KQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCE 677
Query: 305 MHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFMID--PNNMGAYVILSNTYAAARR 360
M P +N W +++ H A + EK+ + PN++ +LS
Sbjct: 678 M---PEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLV 734
Query: 361 WKDAASLRVFMRNKGMKKTPA 381
K + G+ PA
Sbjct: 735 TKGLGYFESMSKEHGLVPKPA 755
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW +I G ++NG EEA+++ +M + P + SSVL G+++H
Sbjct: 177 DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH 236
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++G + ++L+ +Y++ + ++F + KD +S+NS+I+G Q G D
Sbjct: 237 ALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSD 296
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ F +M +KP V+ +S++ ACA L G+QLH +I+ G +M + +LL
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALL 356
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y C +I+ A +F ++V W +++ N ++ +F QM+ G+ PN
Sbjct: 357 DLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQF 416
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+ ++L C+ G +D + K G + + + D+ + GKL A+ +
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRT 475
Query: 305 MHAGPTENVWLTLLSACRVH 324
+ + W L+S H
Sbjct: 476 LTEDDVVS-WTALISGYAQH 494
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 7/323 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY-VDVIK 59
MP + SW+ +I G + L++ M N+ P + +SVL + + + +
Sbjct: 71 MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH I HGL + I + LI +YAK + + ++F L KD++SW ++I+G Q
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +E + F +M A I P FSS++ C + +G+QLH + + G ++
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ +Y++ N A +F KM D VS+ ++I G A G + A+ LF +M++D +
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYL 310
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V ++L+AC+ G + K +S GI+ A+ DL ++ A+
Sbjct: 311 KPDCVTVASLLSACASNGALCKG-EQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 300 EFISNMHAGPTENV--WLTLLSA 320
E TENV W +L A
Sbjct: 370 EMFLT---AQTENVVLWNVMLVA 389
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+++ K++HG ++ G + + L+++Y ++ ++F +P + SW+ II+G
Sbjct: 26 LVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISG 85
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA-HLTTLHLGKQLHGCIIRNGFDD 175
++ + + L F M+ + P +SF+S++ AC+ H + +Q+H II +G
Sbjct: 86 FMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLC 145
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ I++ L+ +YAK G I AR +FD + D VSW A+I G + +G +AI LF +M
Sbjct: 146 SPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMH 205
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA--AVADLLGRAG 293
G+ P F +VL+ C+ L D +++ YG S E Y A+ L R
Sbjct: 206 TAGIFPTPYVFSSVLSGCTKIKLFDVG-EQLHALVFKYG--SSLETYVCNALVTLYSRMP 262
Query: 294 KLQEAYEFISNMHA 307
A + S M +
Sbjct: 263 NFVSAEKVFSKMQS 276
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 44/230 (19%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ C + +L K+LHG I++ GF + + + L+D+Y G++ +F+ M
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS------------H 255
+ SW +I G ++ + LF M ++ V P ++F +VL ACS H
Sbjct: 76 VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIH 135
Query: 256 A------------------------GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
A GLI A F+++ ++ + A+ +
Sbjct: 136 ARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS-----WVAMISGFSQ 190
Query: 292 AGKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAEKIF 338
G +EA MH PT V+ ++LS C K ++ ++ +F
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSWN +I G +++G EA+N+ +M V P+ T VL + V KG
Sbjct: 678 MPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKG 737
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
+ HGL + ++++ ++ + + + +P++ DA W ++++ C
Sbjct: 738 LGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACT 797
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/517 (43%), Positives = 332/517 (64%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++D+VSWN++I +N A +M +PD TL S+ I A D
Sbjct: 377 MFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNS 436
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +HG+ +R G L +V IG+++++MYAK ++ +H++F ++ VKD ISWN++I G Q
Sbjct: 437 RSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQ 496
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E ++ ++ M K I P ++ SI+PA AH+ L G ++HG +I+ ++F
Sbjct: 497 NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVF 556
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ L+D+Y KCG + A +F ++ V+W A+I + +HG+A + LF +M +G
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG 616
Query: 239 VKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
VKP+ V FV++L+ACSH+G +++ W + + ++YGI PS +HY + DLLGRAG L+
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWCF--RLMQEYGIKPSLKHYGCMVDLLGRAGYLEM 674
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY FI +M P ++W LL ACR+H N+EL ++++F +D N+G YV+LSN YA
Sbjct: 675 AYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYAN 734
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+W+ +R R +G+KKTP S IEV K F G++SHP I E L+ L +
Sbjct: 735 VGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAK 794
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M+ GY+PD VL DVEE++K+++L HSERLAI FGII TP + IRI KNLRVCGDC
Sbjct: 795 MKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDC 854
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A KFIS+I QREI+VRD++RFHHF+DG CSCGDYW
Sbjct: 855 HNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 158/301 (52%), Gaps = 4/301 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+P D+ +WN++I NG + EA+ Q+ V+ ++PD +T VL VD
Sbjct: 177 IPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD--- 233
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IH +A + G NV + +SLI+MY++ + LF +P +D SWN++I+G +Q
Sbjct: 234 GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L +M + IK V+ SI+P C L + +H +I++G + ++F+
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L++MYAK GN+ AR F +M + D+VSW ++I + + A F +M+ +G
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + V++ + + + + S + + + AV D+ + G L A+
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 300 E 300
+
Sbjct: 474 K 474
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 9/318 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + G ++ I + L+N+YA V S F +P KD +WNS+I+ V N
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195
Query: 121 GLFDEGLK-FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G F E + F++ +L+++I+P +F ++ AC TL G+++H + GF N+F+
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFV 252
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+ MY++ G +AR +FD M D+ SW A+I G +GNA A+ + ++M +G+
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
K N V V++L C G I A + K +G+ A+ ++ + G L++A
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIK-HGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYAA 357
+ M + W ++++A + + A K+ + P+ + V L++ A
Sbjct: 372 KAFQQMFITDVVS-WNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLL-TLVSLASIVAQ 429
Query: 358 ARRWKDAASLRVFMRNKG 375
+R K++ S+ F+ +G
Sbjct: 430 SRDCKNSRSVHGFIMRRG 447
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
T K LH ++ G ++FI++ L+++YA G++ L+RC FD++ D+ +W ++I
Sbjct: 130 TKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMI 189
Query: 216 MGNALHGNAHDAISLFEQ-MEKDGVKPNSVAFVAVLTACSHAGLID----KAWSYFNSMT 270
+G+ H+AI F Q + ++P+ F VL AC L+D W++
Sbjct: 190 SAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRRIHCWAFKLGFQ 247
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +A S H + G A L + F
Sbjct: 248 WNVFVAASLIHMYSRFGFTGIARSLFDDMPF 278
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/518 (44%), Positives = 328/518 (63%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP D SW+ ++ AR+G AL I R+M G+ + + FT SS L
Sbjct: 119 MPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVD-NEFTASSALAAATAARC 177
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
G+E+H + +R G+DA+ + S+L +MYAKC RV+D+ +F +PV+D +SW +++
Sbjct: 178 ARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVER 237
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
EG + F +ML + I+P +++ ++ ACA T+ LGKQ+HG + ++ D+
Sbjct: 238 YFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDS 297
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
F S+L+ MY+K G++ A +F M D+VSWTA+I G A +G +A+ F+ + +
Sbjct: 298 CFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLR 357
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G +P+ V FV VL+AC+HAGL+DK S F+S+ +YGI + +HYA V DLL R+G +
Sbjct: 358 SGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFE 417
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
A E I+ M P + +W +LL CR+HKNV LA AE +F I+P N YV L+N YA
Sbjct: 418 RAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYA 477
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ + + + R M KG+ K PA SWIEV + + F+ GDK HP ++ LK+L
Sbjct: 478 SVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYV 537
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+M +EGYV DT VLHDVE+EQK+ + YHSERLA+ FGII TP G I++ KNLR+CGD
Sbjct: 538 KMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGD 597
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHT IK ISKIVQREIIVRD++RFHHF++G CSC DYW
Sbjct: 598 CHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 75 NVCIGSSLINMYAKCARVEDSHR-LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
+VC ++L+ + R S R LF +P +D SW++I++ ++G L +R+M
Sbjct: 91 DVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRM 150
Query: 134 LIAKIKP---RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
L + SS + A G++LH ++R G D + + S+L DMYAKC
Sbjct: 151 LREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKC 210
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G + AR +FD+M + D+VSWTA++ + LF +M + G++PN + VL
Sbjct: 211 GRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVL 270
Query: 251 TACS 254
AC+
Sbjct: 271 RACA 274
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 331/516 (64%), Gaps = 7/516 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW+ +I ++ +E ++ RQM + +P + ++L A +
Sbjct: 71 MPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNAMACVRSHEEA 127
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++ + +GLD + + S+ M+A+C RVE + +LF + KD ++W + I V+
Sbjct: 128 DDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKA 187
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E L +QM++ I P ++ ++ AC+ L + L +HG II GF N +A
Sbjct: 188 DMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLA 246
Query: 181 --SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L+D+Y KCG++ AR +FD M +I++W+A+I G +HG +A++LF+QM K
Sbjct: 247 VETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KAS 305
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ + FV++L+ACSH+GL+ + W FNSM +D+G+ P EHYA + D+LGRAGKL EA
Sbjct: 306 VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEA 365
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FI M P VW LL ACR+H NV+LA VA +F +DP+N G YVIL N Y
Sbjct: 366 CDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLT 425
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+ K+A S+R M+N+G+KK S IE+KNK YAFVAGD+SHP I L+ L++R+
Sbjct: 426 GKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRI 485
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
QEGY PD VLHDV+EE K+++LY HSE+LAIVFG++ G+ IRI KNLRVCGDCH
Sbjct: 486 RQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCH 545
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFISK+ REI+VRD RFHHF++G CSC DYW
Sbjct: 546 TATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 8/295 (2%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR 91
M + ++PD+FT ++ + G IH ++ G + V I +SLI MY KC +
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
E S ++F +P K+A+SW++II C+Q+ EG FRQML +P S +I+ A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNA 117
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
A + + ++ ++ NG D + + S+ M+A+CG + +AR +FD + D+V+W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
I +A+ L +QM G+ P+++ + V+ ACS A +T
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ A+ DL + G L A + M N+ W ++S +H
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQ---ERNIITWSAMISGYGMH 289
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 325/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G ++G +EEA+ +M N+ P+ T+ VL G
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I + +G +N+ + ++LI+MY KC + + LF + KD ISWN++I G
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFI 179
L++E L F ML + +KP V+F I+ ACA L L LGK +H I +N + N +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCG I A +F M ++ SW A++ G A+HG+A A++LF +M G+
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462
Query: 240 -KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ + FV VL+AC+ AGL+D YF SM +DYGI+P +HY + DLL RA K +EA
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ NM P +W +LLSAC+ H VE VAE++F ++P N GA+V+LSN YA A
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGA 582
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D A +R + +KGMKK P C+ IE+ + F+ GDK HP + I + L E+ + +
Sbjct: 583 GRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLL 642
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VP+T EVL+D++EE K+ L HSE+LAI FG+I T GTTIRI+KNLRVCG+CH
Sbjct: 643 EENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCH 702
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+A K ISKI REII RD +RFHHF+DG CSC D W
Sbjct: 703 SATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 32/353 (9%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN++I G + + +L++ +M ++P+S T + +GK++H +A+
Sbjct: 99 WNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHAL 158
Query: 69 RHGLDANVCIGSSLINMYAKCAR-------------------------------VEDSHR 97
+ L N + +S+I+MYA ++D+ R
Sbjct: 159 KLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARR 218
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +PVKD +SWN++I+G VQ+G F+E + F +M A + P + ++ AC H +
Sbjct: 219 LFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRS 278
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
LGK + + NGF N+ + ++L+DMY KCG +AR +FD ++ D++SW +I G
Sbjct: 279 GELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGG 338
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
+ +A++LFE M + VKPN V F+ +L AC+ G +D + K+ +
Sbjct: 339 YSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSS 398
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ + ++ D+ + G ++ A +MH+ + W +LS +H + E A
Sbjct: 399 NASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS-WNAMLSGFAMHGHAERA 450
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-----DAISWNSIIA 115
K+IH I+ GL+ V + S LI+ A + S+ L + + WNS+I
Sbjct: 45 KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + L F +ML ++P +F + +C H GKQLH ++
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLH----------------------------- 206
N + +S++ MYA G + AR +FDK L
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224
Query: 207 --DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH--AGLIDKA 262
D+VSW A+I G G +AI F +M++ V PN V VL+AC H +G + K
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK- 283
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ S +D G + + A+ D+ + G+ A E +
Sbjct: 284 --WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGI 324
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 325/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+++WN VI G ++N EEA ++ M + + TLS+VL A
Sbjct: 273 MPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMC 332
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH +++ G + + + +SLI+ Y KC VED+ R+F P+ D + + S++ Q+
Sbjct: 333 RQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQD 392
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L+ + +M IKP SS++ ACA L+ GKQ+H I++ GF ++F
Sbjct: 393 GQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAG 452
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MYAKCG+I A C F ++ + IVSW+A+I G A HG +A+ LF+QM K GV
Sbjct: 453 NSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVP 512
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V+VL AC+HAGL+ +A YFNSM +GI P EHYA + DLLGRAGKL+ A E
Sbjct: 513 PNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAME 572
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M VW LL A R+HKN++L + AE + ++P G +V+L+N YA+
Sbjct: 573 LVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGM 632
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M++ +KK P SW+EVK+K Y F+ GD+SH I L EL + +++
Sbjct: 633 WDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKK 692
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP + LHDVE +K+ LLY+HSE+LA+ FG+I TP G IR+ KNLR+C DCHT
Sbjct: 693 AGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTV 752
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KFISKIV REIIVRD +RFHHF +G CSCG+YW
Sbjct: 753 LKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 142/252 (56%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +VSWN + + ++ EA+++ M ++P+ F+LSS++ + D ++G
Sbjct: 71 IPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGY I+ G D++ ++L++MYAK +ED+ +F + D +SWN+IIAGCV +
Sbjct: 131 RKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLH 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ R+M + + P + SS + ACA + LG+QLH +I+ + F+
Sbjct: 191 EYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLG 250
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KC ++ AR +F M D+++W AVI G++ + +A SLF M +G+
Sbjct: 251 VGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIG 310
Query: 241 PNSVAFVAVLTA 252
N VL +
Sbjct: 311 FNQTTLSTVLKS 322
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 145/250 (58%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN +I G + + AL ++R+M + P+ FTLSS L A G+++H
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLH 235
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ + ++ +G LI+MY+KC ++D+ +F L+P +D I+WN++I+G QN +
Sbjct: 236 SSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDE 295
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E F M I + S+++ + A L ++ +Q+H +++GF+ + ++ +SL+
Sbjct: 296 EAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLI 355
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y KCG++ A +F++ + D+V +T+++ A G +A+ L+ +M+ G+KP+S
Sbjct: 356 DTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSF 415
Query: 245 AFVAVLTACS 254
++L AC+
Sbjct: 416 VCSSLLNACA 425
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 131/237 (55%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
+ +K + F SVL D++ GK++HG + G D++ + +SL+ +YAKC D
Sbjct: 4 LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ LF +P + +SWN++ + V + + E + F M+++ I+P S SS++ C
Sbjct: 64 ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L G+++HG +I+ G+D + F A++L+DMYAK G + A +FD++ DIVSW A+
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
I G LH H A+ L +M K G+ PN + L AC+ L + +S+ K
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + IK +F S++ AC L LGKQ+HG ++ GFD + F+A+SL+ +YAKCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +FD + +VSW A + +H + H +A+SLF M G++PN + +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNA-LFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISNMHA 307
C+ GL D S Y I ++ A A+ D+ + G L++A + A
Sbjct: 120 VCT--GLED---SVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEI-A 173
Query: 308 GPTENVWLTLLSACRVHK 325
P W +++ C +H+
Sbjct: 174 KPDIVSWNAIIAGCVLHE 191
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 336/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV LVSWNTVI L +N EAL ++ QM + FT+SSVL A +++
Sbjct: 104 MPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC 163
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H ++I+ +D+N +G++L+++YAKC+ ++D+ ++F +P K+A++W+S++AG VQN
Sbjct: 164 MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 223
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L FR + SS + ACA L TL GKQ+H ++GF N++++
Sbjct: 224 GFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVS 283
Query: 181 SSLLDMYAKCGNIRLARCIFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SSL+DMYAKCG IR A +F +++ IV W A+I G A H A +A+ LFE+M++ G
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V +V VL ACSH GL ++ YF+ M + + ++PS HY+ + D+LGRAG + +AY
Sbjct: 344 FPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAY 403
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I M T ++W +LL++C+++ N+E A A+ +F ++PNN G +++L+N YAA +
Sbjct: 404 DLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANK 463
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W + A R +R ++K SWIE+KNK ++F G+++HP I L L+ ++
Sbjct: 464 KWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELK 523
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ Y DT LHDVEE +K+ LL +HSE+LAI FG++C P IRIIKNLR+CGDCHT
Sbjct: 524 KLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHT 583
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K +SK REIIVRD +RFHHF+DG CSCG++W
Sbjct: 584 FMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 3/295 (1%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
L +L + A + G+ H IR GL+ ++ + LINMY+KC+ V+ + + F +P
Sbjct: 46 LHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMP 105
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ 163
VK +SWN++I QN E LK QM + SS++ CA + Q
Sbjct: 106 VKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQ 165
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
LH I+ D N F+ ++LL +YAKC +I+ A +F+ M + V+W++++ G +G
Sbjct: 166 LHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGF 225
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+A+ +F + G + + ++AC+ A LI+ ++++ G +
Sbjct: 226 HEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEG--KQVHAISHKSGFGSNIYVS 283
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+++ D+ + G ++EAY + + +W ++S H A + EK+
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKM 338
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 322/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL +GL EE+L M ++PD + L S+ A DV+ G
Sbjct: 26 MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSG 85
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C + D LP + +S N+ I+G QN
Sbjct: 86 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQN 145
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L+FF M A ++ V+F S + +C+ L L G+Q+H I+ G D + +
Sbjct: 146 GDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVM 205
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY++CG + + + + D+V +A+I HG+ A+ LF+QM G +
Sbjct: 206 TSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAE 265
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L ACSH+GL D+ + F MTK YG+ PS +HY + DLLGR+G L EA +
Sbjct: 266 PNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAED 325
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ K ++A ++AE++ +DP++ +YV+LSN A + R
Sbjct: 326 LILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSR 385
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D + +R MR + ++K P SW+E+K + + F GD+SH I E L+E++ R+ Q
Sbjct: 386 WEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQ 445
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD V HD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 446 CGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVA 505
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +SK++ REI+VRD SRFHHF+DGKCSCGDYW
Sbjct: 506 IKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 122/273 (44%), Gaps = 33/273 (12%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LI Y K +E + +LF +P ++ +WN+++AG +GL +E L FF M ++P
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG +R
Sbjct: 66 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS------- 254
+ +IVS I G +G+A A+ F M GV+ N+V FV+ +T+CS
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185
Query: 255 ----HAGLI----DKAWSYFNSMTKDY---GIAPSFEHY------------AAVADLLGR 291
HA I DK S+ Y G E +A+ G
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245
Query: 292 AGKLQEAYEFISNMHAG---PTENVWLTLLSAC 321
G Q+A M A P E +LTLL AC
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYAC 278
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 315/514 (61%), Gaps = 34/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN+++ G A+NG + +AL + R+M ++ LKPD+ T+ S+LP +
Sbjct: 198 MPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN------- 250
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
C V +F L K ISWN +IA V N
Sbjct: 251 --------------------------TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNN 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +E + + QM + ++P VS SS++PAC L+ LG+++H + R N+ +
Sbjct: 285 AMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLE 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG ++ AR +FD+M D+VSWT++I + G DA++LF++M G
Sbjct: 345 NALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFT 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ +AFV+VL ACSHAGL+D+ FN M +YGI P EHY + DLLGRAGK+ EAY
Sbjct: 405 PDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAYH 463
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
M P E VW +LLSACRV+ ++ +A A+ +F + P G YV+LSN YA A R
Sbjct: 464 LTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGR 523
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D ++R M +KG+KK P S +E+ + Y F+AGD+SH I +AL L+ RM++
Sbjct: 524 WQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKE 583
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P+T LHDVEEE K+ L HSE+LAIVF I+ T G+TIRI KN+RVCGDCH A
Sbjct: 584 LGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVA 643
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKI +REII+RD RFHHF DG CSCGDYW
Sbjct: 644 TKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 101/189 (53%)
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
I L N +G L+ YA C + +F + K+ + +N +I V NGL+ + L
Sbjct: 63 IDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDAL 122
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F+ M P + ++ ++ AC+ L +G Q+HG +++ G D N++I + L+ MY
Sbjct: 123 LVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMY 182
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KC + AR + D+M D+VSW +++ G A +G +DA+ L +ME +KP++
Sbjct: 183 GKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMG 242
Query: 248 AVLTACSHA 256
++L A ++
Sbjct: 243 SLLPAVTNT 251
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 162 KQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
K+LH I I N + L+ YA CG R IFD++ ++V + +I
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+G DA+ +F+ M G P++ + VL ACS +G
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSG 151
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 333/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +DL+ W+ +I A++ +EAL++ +M ++ P++FT +SVL A V + G
Sbjct: 298 MPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG 357
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH ++ GL++NV + ++++++YAKC +E+S +LF LP ++ ++WN+II G VQ
Sbjct: 358 KQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQL 417
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F ML ++P V++SS++ A A L L G Q+H I+ ++ + +A
Sbjct: 418 GDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA 477
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG I AR FDKM+ D VSW A+I G ++HG + +A++LF+ M+ K
Sbjct: 478 NSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCK 537
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + FV VL+ACS+AGL+ K ++F SM+KDY I P EHY + LLGR G+ EA +
Sbjct: 538 PNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMK 597
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + P+ VW LL AC +HK V+L A+ + ++P++ +V+LSN YA A R
Sbjct: 598 LIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGR 657
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R +M+ K ++K P SW+E + + F GD SHP I L+ L ++
Sbjct: 658 WDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRD 717
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD VL DV++++K+ L+ HSERLA+ +G+I TP +IRIIKNLR+C DCHT
Sbjct: 718 AGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTV 777
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K ISK+VQREI++RD +RFHHF G CSCGDYW
Sbjct: 778 MKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 190/380 (50%), Gaps = 14/380 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++ A N YEE+L + QM + KP++FT+S L GK +H
Sbjct: 201 DMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVH 260
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ D ++ +G +L+ +YAK + D+ RLF +P D I W+ +IA Q+
Sbjct: 261 GCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSK 320
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F +M + P + +F+S++ ACA +L LGKQ+H C+++ G + N+F++++++
Sbjct: 321 EALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIM 380
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKCG I + +F+++ + V+W +I+G G+ A++LF M + ++P V
Sbjct: 381 DVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEV 440
Query: 245 AFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ +VL A + GL + + KD +A S + D+ + G++ +A
Sbjct: 441 TYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS------LIDMYAKCGRINDAR 494
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID--PNNMGAYVILSNTYAA 357
M+ E W ++ +H A + + + D PN + +LS A
Sbjct: 495 LTFDKMNK-RDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNA 553
Query: 358 ARRWKDAASLRVFMRNKGMK 377
+K A ++ +K
Sbjct: 554 GLLYKGQAHFESMSKDYDIK 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 167/320 (52%), Gaps = 6/320 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +S+ T+ G +R+ + +AL+ + ++ + + F +++L +
Sbjct: 96 MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLC 155
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + G A+ +G++LI+ Y+ V+ + +F + KD +SW ++A +N
Sbjct: 156 WTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAEN 215
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++E L+ F QM I KP + + S + +C L ++GK +HGC ++ +D ++F+
Sbjct: 216 CFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVG 275
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LL++YAK G I A+ +F++M D++ W+ +I A + +A+ LF +M + V
Sbjct: 276 IALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVV 335
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN+ F +VL AC+ + +D + + K +G+ + A+ D+ + G+++ + +
Sbjct: 336 PNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMK 394
Query: 301 FISNMHAGPTEN--VWLTLL 318
+ P N W T++
Sbjct: 395 LFEEL---PDRNDVTWNTII 411
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Query: 40 DSFTLSSVLP-IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
DS + + +L I + D I GK +H + ++ G ++ + L+N Y + ++D+ +L
Sbjct: 33 DSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKL 92
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F +P + IS+ ++ G ++ F + L F ++ + F++++ +
Sbjct: 93 FDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLA 152
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
HL LH C+ + G + F+ ++L+D Y+ GN+ +AR +FD + D+VSWT ++
Sbjct: 153 HLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A + +++ LF QM G KPN+ L +C
Sbjct: 213 AENCFYEESLQLFNQMRIMGYKPNNFTISGALKSC 247
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
GK LH I++ G ++F + LL+ Y + +++ A +FD+M + +S+ + G +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
H A+ ++ K+G + N F +L L W+
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWT 157
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/526 (41%), Positives = 332/526 (63%), Gaps = 12/526 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-----------LKPDSFTLSSVLP 49
+P ++VSW ++I G +N EA+ + ++ V+ + DS L V+
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
A + +HG A++ G + + +G++L++ YAKC + S ++F + D S
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
WNS+IA QNGL E F M+ +++ V+ S+++ ACAH L +GK +H +
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV 326
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
++ +DN+ + +S++DMY KCG + +AR FD++ ++ SWT ++ G +HG+ +A+
Sbjct: 327 VKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAM 386
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F +M + G+KPN + FV+VL ACSHAGL+ + W +FN M ++ + P EHY+ + DL
Sbjct: 387 KVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDL 446
Query: 289 LGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAY 348
LGRAG L+EAY I M P VW +LL ACR+HKNVEL A K+F +DP+N G Y
Sbjct: 447 LGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYY 506
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
V+LSN YA A RW D +R+ M+N G+ KTP S +E K + + F+ GDK HP + +I
Sbjct: 507 VLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIY 566
Query: 409 EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRII 468
E L EL ++++ GY+P+ VL+DV+ E+K +L HSE+LA+ FGI+ + G+ I+II
Sbjct: 567 EYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQII 626
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLR+CGDCH AIK ISKIV REI++RD+ RFHHF+DG CSCGDYW
Sbjct: 627 KNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 28/372 (7%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+ + SWN++I AR+G +AL M ++L P+ T + + D+ GK+I
Sbjct: 49 TSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQI 108
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G +++ + S+LI+MY+KC + D+ +LF +P ++ +SW S+I+G VQN
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168
Query: 124 DEGLKFFRQMLIAK-----------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
E + F++ L+ + V ++ ACA + + + +HG ++ G
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
F+ + + ++L+D YAKCG I ++R +FD M+ D+ SW ++I A +G + +A SLF
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288
Query: 233 QMEKDG-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M K G V+ N+V AVL AC+H+G + + + K + + ++ D+ +
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK-MELEDNLVVGTSIVDMYCK 347
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM------IDPNNM 345
G+++ A + + ++ W +++ +H + GK A K+F I PN
Sbjct: 348 CGRVEMARKAFDRLKRKNVKS-WTVMVAGYGMHGH----GKEAMKVFYEMIRCGIKPN-- 400
Query: 346 GAYVILSNTYAA 357
Y+ + AA
Sbjct: 401 --YITFVSVLAA 410
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 197 RCIFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
R +F K +D + SW ++I A G++ A+ F M K + PN F + +CS
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCS- 97
Query: 256 AGLIDK-AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV- 313
L D A + +G +A+ D+ + G L +A + + P NV
Sbjct: 98 -SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEI---PERNVV 153
Query: 314 -WLTLLSACRVHKNVELAGKVAEKIFMIDPNN 344
W +++S ++ A + ++ ++D +
Sbjct: 154 SWTSMISGYVQNERAREAVFLFKEFLLVDETD 185
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/515 (44%), Positives = 333/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIK 59
MP DL+ W+ +I A++ +EAL + +M ++ P++FT +SVL A V +
Sbjct: 266 MPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNL 325
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +IH ++ GLD+NV + ++L+++YAKC +E+S +LF K+ ++WN+II G VQ
Sbjct: 326 GNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQ 385
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G ++ L F ML I+P V++SS++ A A L L G+Q+H I+ ++ + +
Sbjct: 386 LGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVV 445
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+DMYAKCG I AR FDKMD D VSW A+I G ++HG +A++LF+ M++
Sbjct: 446 ANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNS 505
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + FV VL+ACS+AGL+DK ++F SM +DYGI P EHY + LLGR+G+ EA
Sbjct: 506 KPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAV 565
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I + P+ VW LL AC +HKN++L A+++ ++P + +V+LSN YA A+
Sbjct: 566 KLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAK 625
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + A +R M+ K +KK P SW+E + + F GD SHP I L+ L ++
Sbjct: 626 RWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTR 685
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD VL DVE+++K+ LL+ HSERLA+ FG+I P G +IRIIKNLR+C DCH
Sbjct: 686 DAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHA 745
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +SKIVQREI++RD +RFHHF G CSCGDYW
Sbjct: 746 VIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 166/322 (51%), Gaps = 9/322 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+++ VS+ T+ G +R+ ++ A ++ ++ + + F +++L +
Sbjct: 64 MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H Y + G A+ +G++LI+ Y+ C V+ + ++F + KD +SW ++A +N
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L F QM I +P + + S+ + +C L +GK +HGC ++ +D ++++
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-V 239
+LL++Y K G I A+ F++M D++ W+ +I A + +A+ LF +M + V
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN+ F +VL AC+ L++ + +S G+ + A+ D+ + G+++ +
Sbjct: 304 VPNNFTFASVLQACASLVLLNLG-NQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSV 362
Query: 300 EFISNMHAGPTEN---VWLTLL 318
+ + G TE W T++
Sbjct: 363 KLFT----GSTEKNEVAWNTII 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 125/268 (46%), Gaps = 5/268 (1%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
DS + +++L D GK +H + ++HG ++ + L+N Y +ED+ +LF
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+P+ + +S+ ++ G ++ F + ++ + F++++ +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+H + + G + F+ ++L+D Y+ CGN+ AR +FD + D+VSWT ++ A
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
+ D++ LF QM G +PN+ A L +C+ S K +
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALK---VCYDR 238
Query: 280 EHYAAVA--DLLGRAGKLQEAYEFISNM 305
+ Y +A +L ++G++ EA +F M
Sbjct: 239 DLYVGIALLELYTKSGEIAEAQQFFEEM 266
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+V +NT+ G AR A + Q+ L PD +T S+L A + +G
Sbjct: 81 IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H AI+ GL NV + +LINMY C ++ + R+F + +++N++I G +
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FR++ +KP V+ S++ +CA L L LGK +H + +NGF+ + +
Sbjct: 201 SRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVD 260
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++ A C+F+ M + D +W+A+IM A+HG+ A+SLF++M K G +
Sbjct: 261 TALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTE 320
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH GL+++ + YF M YG+ P +HY + DLLGRAG+L+EAYE
Sbjct: 321 PDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYE 380
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W TLLSAC H NVEL +V E+IF +D ++ G Y+ILSN A A R
Sbjct: 381 FIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGR 440
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D +R M +G+ K P CS +EV N + F +GD H ++++AL EL++ ++
Sbjct: 441 WEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKL 500
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP+T V H D+E+E+K+ L YHSE+LAI FG++ TP GTTIR++KNLRVCGDCH+
Sbjct: 501 VGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHS 560
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS I R+II+RD RFHHF+DGKCSC DYW
Sbjct: 561 AAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 134/267 (50%), Gaps = 5/267 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLIN---MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
K++ +AI+ L +++ + + IN + ++ +H LF +P D + +N++ G
Sbjct: 37 KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ F Q+L + + P +F S++ ACA L G+QLH I+ G +N+
Sbjct: 97 ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENV 156
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++ +L++MY C + AR +FDK+ +V++ A+I G A ++A+SLF +++
Sbjct: 157 YVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQAR 216
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+KP V ++VL++C+ G +D + + K G + A+ D+ + G L +
Sbjct: 217 NLKPTDVTMLSVLSSCALLGALDLG-KWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDD 275
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVH 324
A NM T+ W ++ A +H
Sbjct: 276 AVCVFENMAVRDTQ-AWSAMIMAYAIH 301
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/543 (41%), Positives = 329/543 (60%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVSWN +I G R+G Y +A+ + + M LKPD ++SSVLP D + G +IH
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIH 233
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA----------------- 107
Y I+ GL + + S+LI+MY KCA + +F + D
Sbjct: 234 CYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVD 293
Query: 108 ----------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
+SW S+IA C QNG E L+ FR+M I +KP V+ ++PA
Sbjct: 294 NALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPA 353
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C ++ L GK H +RNG +++++ S+L+DMYAKCG + +R FD M ++VSW
Sbjct: 354 CGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSW 413
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+++ G A+HG +AI++FE M++ G KP+ V+F VL+AC+ GL ++ W YF+SM++
Sbjct: 414 NSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
++G+ EHY+ + LLGR+G+L+EAY I M P VW LLS+CRVH V+L
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGE 533
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+++F ++P N G Y++LSN YA+ W + +R MR++G+KK P SWIE+KNK
Sbjct: 534 IAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKV 593
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ +AGD SHP +I E L +L M++ GYVP T VL DVEE+ K+ +L HSE+LA
Sbjct: 594 HMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLA 653
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+V G++ T G +++IKNLR+C DCH IKFIS +REI VRD +RFH F+ G CSCG
Sbjct: 654 VVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCG 713
Query: 512 DYW 514
DYW
Sbjct: 714 DYW 716
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
F ++ F ML I P +++ CA L+ L GKQ+H + +G + + SS
Sbjct: 55 FGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSS 114
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL MY + +++ AR +FDK+ +V+ +A+I A G + LF Q GV+ N
Sbjct: 115 LLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELN 174
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
V++ +++ + +G A F +M + G+ P ++V +G
Sbjct: 175 LVSWNGMISGFNRSGSYLDAVLMFQNMHLE-GLKPDGTSVSSVLPAVG 221
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWN+++ G A +G EA+NI M KPD + + VL +G
Sbjct: 405 MPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEG 464
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
R HG++A + S ++ + + R+E+++ + +P + D+ W ++++ C
Sbjct: 465 WFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCR 524
Query: 119 QNGLFDEG 126
+ D G
Sbjct: 525 VHNRVDLG 532
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/506 (43%), Positives = 326/506 (64%), Gaps = 1/506 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W T+I G +++ +AL QM P+ FTLSSV+ A G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ ++ G D+NV +GS+L+++Y + ++D+ +F L ++ +SWN++IAG +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L+ F+ ML +P H S++S+ AC+ L GK +H +I++G F
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G+I AR IFD++ D+VSW +++ A HG +A+ FE+M + G++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++F++VLTACSH+GL+D+ W Y+ M KD GI P HY V DLLGRAG L A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT +W LL+ACR+HKN EL AE +F +DP++ G +VIL N YA+ R
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW+E++N + FVA D+ HP I +E+L ++++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT V+ V++++++ L YHSE++A+ F ++ TP G+TI I KN+RVCGDCHTA
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDG 506
IK SK+V REIIVRD +RFHHF+D
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+I+G+ +H + ++ ++ +G++L+NMYAKC +E++ ++F +P +D ++W ++I+G
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+ + L FF QML P + SS++ A A G QLHG ++ GFD N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+LLD+Y + G + A+ +FD ++ + VSW A+I G+A A+ LF+ M +
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
DG +P+ ++ ++ ACS G +++ M K +F + D+ ++G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIH 314
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVH 324
+A + + A W +LL+A H
Sbjct: 315 DARKIFDRL-AKRDVVSWNSLLTAYAQH 341
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 124 DEGLKFFRQMLIAKIKPRHVS----------FSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
DE LKF L+ + + +++++ C L G+ +H I+++ F
Sbjct: 32 DESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIF 91
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
++ + ++LL+MYAKCG++ AR +F+KM D V+WT +I G + H DA+ F Q
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 234 MEKDGVKPNSVAFVAVLTACS 254
M + G PN +V+ A +
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAA 172
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 330/510 (64%), Gaps = 1/510 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +I R GL+++ ++++M +KPD F ++SVL FA + +G
Sbjct: 572 MAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQG 631
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGYAIR+G++ + + ++L+ MY C +E++ +F + KD ISWN++I G +N
Sbjct: 632 KSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRN 691
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E F ML+ + KP V+ + I+PA A +++L G+++H +R GF ++ + +
Sbjct: 692 NFANESFSLFSDMLL-QFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTS 750
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG + +AR +FD++ +++SWT +I G +HG DA++LFEQM GV+
Sbjct: 751 NALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVE 810
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P++ +F A+L AC H+GL + W +FN+M K+Y I P +HY + DLL G L+EA+E
Sbjct: 811 PDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFE 870
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P ++W++LL CR+H++V+LA KVA+++F ++P N G YV+L+N YA A R
Sbjct: 871 FIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAER 930
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ L+ + +G+++ CSWIEV+ K + F+A +++HP ++RI E L + RM +
Sbjct: 931 WEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMRE 990
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EG+ P K L + L HS +LA+ FG++ P+G IR+ KN +VC CH A
Sbjct: 991 EGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEA 1050
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
KFISK+ REII+RD+SRFHHFE G+CSC
Sbjct: 1051 AKFISKMCNREIILRDSSRFHHFEGGRCSC 1080
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 1/262 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +SWN+VI G NGL EA+ + +M + DS TL SVLP A G
Sbjct: 471 MPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVG 530
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HGY+++ GL + ++L++MY+ C+ ++++F + K+ +SW ++I +
Sbjct: 531 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRA 590
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GLFD+ ++M++ IKP + +S++ A +L GK +HG IRNG + + +A
Sbjct: 591 GLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY C N+ AR +FD + DI+SW +I G + + A+++ SLF M K
Sbjct: 651 NALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FK 709
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
PN+V +L A + +++
Sbjct: 710 PNTVTMTCILPAVASISSLERG 731
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 126/242 (52%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ G A+ +EE+L + QM + + PD LS +L G HGY +
Sbjct: 378 WNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV 437
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + ++LI+ YAK ++++ +F +P +D ISWNS+I+GC NGL E ++
Sbjct: 438 KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIE 497
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M + + + S++PACA +G+ +HG ++ G +A++LLDMY+
Sbjct: 498 LFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYS 557
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
C + IF M ++VSWTA+I G L ++M DG+KP+ A +
Sbjct: 558 NCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTS 617
Query: 249 VL 250
VL
Sbjct: 618 VL 619
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 146/276 (52%), Gaps = 17/276 (6%)
Query: 1 MP--VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP V+D+ W +++ A+ G ++E +++ RQM + PD+ +S VL A +
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IHG + GL + ++LI +Y++C +ED+ ++F + +DAISWNS I+G
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM- 177
NG D + F +M + V+ S++PACA L +GK +HG +++G ++
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335
Query: 178 --------FIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAI 228
+ S L+ MY KCG++ AR +FD M ++ W ++ G A +++
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 229 SLFEQMEKDGVKPNSVAFVAVLT-----ACSHAGLI 259
LFEQM + G+ P+ A +L +C+ GL+
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLV 431
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 180/394 (45%), Gaps = 23/394 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SWN+ I G NG ++ A+++ +M + + S T+ SVLP A+ + G
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318
Query: 61 KEIHGYAIRHGL---------DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-W 110
K +HGY+++ GL + +GS L+ MY KC + + R+F +P K + W
Sbjct: 319 KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVW 378
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
N I+ G + F+E L F QM I P + S ++ L+ G HG +++
Sbjct: 379 NLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVK 438
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
GF + ++L+ YAK I A +FD+M D +SW +VI G +G +AI L
Sbjct: 439 LGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIEL 498
Query: 231 FEQMEKDGVKPNSVAFVAVLTAC--SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
F +M G + +S ++VL AC SH + + ++ T G+ A+ D+
Sbjct: 499 FVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKT---GLIGETSLANALLDM 555
Query: 289 LGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA-CRVHKNVELAGKVAEKIF-MIDPNN 344
+ NM +NV W ++++ R ++AG + E + I P+
Sbjct: 556 YSNCSDWHSTNQIFRNM---AQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDV 612
Query: 345 MGAYVILSNTYAAARRWKDAASLRVFMRNKGMKK 378
+L + +A K S+ + GM+K
Sbjct: 613 FAVTSVL-HGFAGDESLKQGKSVHGYAIRNGMEK 645
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD--NMFIASSLLDMYAKCGNIRLARCIFD 201
S+ +++ C +L ++ H ++R G + L+ Y KCG++ AR +FD
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFD 154
Query: 202 KMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+M + D+ WT+++ A G+ + +SLF QM+ GV P++ A VL + G I
Sbjct: 155 EMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSI 214
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+ + + + G+ + A+ L R G +++A + +MHA
Sbjct: 215 TEG-EVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHA 261
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/514 (43%), Positives = 319/514 (62%), Gaps = 33/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN+++ G ARNG +++AL + ++M + LKPD+ T++S+LP
Sbjct: 198 MPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT-------- 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
N C+ + V +F L K +SWN +IA + N
Sbjct: 250 --------------NTCLDN-----------VSFVKEMFMKLANKSLVSWNVMIAVYMNN 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E + F QM + P +S +S++PAC L+ L LG+++H ++R N+ +
Sbjct: 285 SMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +FD+M D+VSWT++I ++G DA+SLF +M+ G+
Sbjct: 345 NALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV+VL+ACSHAGL+D+ YF MT++ I P EH+ + DLLGRAG++ EAY
Sbjct: 405 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYG 464
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P E VW LLSACRV+ N+ + A+++F + P G YV+LSN YA A R
Sbjct: 465 FIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGR 524
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D ++R M+ KG+KK P S E+ N+ + F+AGD+SHP +I E L + +M++
Sbjct: 525 WEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKE 584
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T LHDVEEE K+ L HSE+LAI F I+ T G+ IRI KNLRVCGDCH A
Sbjct: 585 AGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIA 644
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV REI +RD +RFHHF +G CSCGDYW
Sbjct: 645 AKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 41/323 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++V +N +I N LY +AL + + M + PD +T VL + D+ G
Sbjct: 97 IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVG 156
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH +R GLD NV +G+ LI+MY KC + ++ R+ +P +D +SWNS++AGC +N
Sbjct: 157 MQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARN 216
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G FD+ L+ ++M + +KP + +S++PA +
Sbjct: 217 GQFDDALEVCKEMELLGLKPDAGTMASLLPA---------------------------VT 249
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT---AVIMGNALHGNAHDAISLFEQMEKD 237
++ LD N+ + +F K+ +VSW AV M N++ +A+ +F QME
Sbjct: 250 NTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA---EAVDIFLQMEDH 300
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
V P++++ +VL AC + + + + P+ A+ D+ + G L+
Sbjct: 301 AVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEY 359
Query: 298 AYEFISNMHAGPTENVWLTLLSA 320
A E M + W +++SA
Sbjct: 360 AREVFDQMKFRDVVS-WTSMISA 381
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 1/204 (0%)
Query: 56 DVIKGKEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ K++H I H L +N +G L+ YA C + +F +P K+ + +N +I
Sbjct: 50 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
V N L+ + L F+ M I P H ++ ++ A + L +G Q+H ++R G D
Sbjct: 110 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 169
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
N+F+ + L+ MY KCG + A + D+M D+VSW +++ G A +G DA+ + ++M
Sbjct: 170 LNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 229
Query: 235 EKDGVKPNSVAFVAVLTACSHAGL 258
E G+KP++ ++L A ++ L
Sbjct: 230 ELLGLKPDAGTMASLLPAVTNTCL 253
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/543 (39%), Positives = 335/543 (61%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I G ++G+ EA + R+M + + PD FT +S+L A+ + GK +HG
Sbjct: 262 VVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQ 321
Query: 67 AIRHGLD----ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IR D A + + ++L+ +Y+K ++ + ++F + +KD +SWN+I++G +++G
Sbjct: 322 FIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGC 381
Query: 123 FD-------------------------------EGLKFFRQMLIAKIKPRHVSFSSIMPA 151
D + LK F QM +KP +++ + A
Sbjct: 382 LDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAA 441
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C L L GKQLH +++ GF+ + ++LL MYA+CG ++ AR +F M D VSW
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I HG+ +A+ LF+QM G+ P+ ++F+ +LTAC+HAGL+D + YF SM +
Sbjct: 502 NAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMER 561
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
D+GI+P +HYA + DLLGRAG++ EA + I M PT +W +LS CR++ ++EL
Sbjct: 562 DFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGA 621
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+++F + P + G Y++LSNTY+AA RW DAA +R MR++G+KK P CSWIEV NK
Sbjct: 622 YAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKV 681
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ GD HP H + L+ + +M + GYVPDTK L D+ +K+ +L+ HSERLA
Sbjct: 682 HVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLA 741
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FG++ P G T+ ++KNL++CGDCHTA+ F+S+ V REI+VRD RFHHF+DG+CSCG
Sbjct: 742 VSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCG 801
Query: 512 DYW 514
+YW
Sbjct: 802 NYW 804
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 62/393 (15%)
Query: 1 MPVS--DLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVD 56
+PV+ D V N +I AR L A+++ R + + +L+PD ++ +S+L D
Sbjct: 115 VPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHD 174
Query: 57 --VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC---ARVEDSHRLFCLLPVKDAIS-- 109
V ++H + G A + + ++LI +Y KC D+ ++ +P KD ++
Sbjct: 175 LAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWT 234
Query: 110 -----------------------------WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
WN++I+G VQ+G+ E + FR+M+ +I P
Sbjct: 235 TIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPP 294
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD----DNMFIASSLLDMYAKCGNIRLA 196
+F+S++ ACA+ GK +HG IR D + + ++L+ +Y+K G I +A
Sbjct: 295 DEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVA 354
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
IFD M L D+VSW ++ G G +A +F++M + ++++ +++ H
Sbjct: 355 TKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYK----SELSWMVMVSGYVHG 410
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM------HAGPT 310
GL + A FN M + + P YA G G L+ + +++ +
Sbjct: 411 GLAEDALKLFNQMRSE-DVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSA 469
Query: 311 ENVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
N LT+ + C K+ L +F++ PN
Sbjct: 470 GNALLTMYARCGAVKDARL-------VFLVMPN 495
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 129/246 (52%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +SW ++ G GL E+AL + QM + ++KP +T + + + + G
Sbjct: 392 MPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHG 451
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + ++ G +A+ G++L+ MYA+C V+D+ +F ++P D++SWN++I+ Q+
Sbjct: 452 KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQH 511
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F QM+ I P +SF +I+ AC H + G Q + R+ G
Sbjct: 512 GHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDH 571
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN----AHDAISLFEQM 234
+ L+D+ + G I AR + M + W A++ G ++G+ A+ A LF+ +
Sbjct: 572 YARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMV 631
Query: 235 -EKDGV 239
E DG
Sbjct: 632 PEHDGT 637
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFF 130
D +SL++ YA R+ DS F +PV +D + N++I+ + L + F
Sbjct: 86 DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145
Query: 131 RQMLIA--KIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDNMFIASSLLDM 186
R +L + ++P SF+S++ A + L + QLH + + G + ++++L+ +
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205
Query: 187 YAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH------------------ 225
Y KC G R AR + D+M D ++WT +++G+ G+ H
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWN 265
Query: 226 -------------DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS---YFNSM 269
+A LF +M + P+ F ++L+AC++AG S F +
Sbjct: 266 AMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRL 325
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
D+ + A+ L ++GK+ A + +M + W T+LS
Sbjct: 326 QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVS-WNTILSG 375
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/514 (42%), Positives = 332/514 (64%), Gaps = 2/514 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGK 61
V D+V+WN +I GL E+A +++ +M + NL+PD T+ S++P A ++ +GK
Sbjct: 174 VRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK 233
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H Y+ GLD N+ + +++++MY KC +E + +F + KD +SW S+++G ++G
Sbjct: 234 FLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 293
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F E L F++M + KI+ ++ ++ ACA L GK +H I + + ++ + +
Sbjct: 294 YFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 353
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+DMYAKCG+I LA +F +M + ++ +W A+I G A+HG+ DAISLF+QME D + P
Sbjct: 354 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMP 413
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V F+A+L ACSHAGL+D+ + F +M + I P EHY V DLL RA K+ +A F
Sbjct: 414 DDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAF 473
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I NM +W TLL ACR + +LA K+ ++ ++P++ G YV+LSN YA +W
Sbjct: 474 IENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQW 533
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
A LR M+NKG++KTP CSWIE+ + FVAGD+SH +I ++E+ R+ +
Sbjct: 534 DHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLD 593
Query: 422 -GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VP T VL D+EEE+K++ L+ HSE+LAI G+I TP G+ IRI+KNLRVC DCH+
Sbjct: 594 GGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSF 653
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SK+ REI+ RD SRFHHF++G CSC D+W
Sbjct: 654 LKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 165/324 (50%), Gaps = 7/324 (2%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT+I G AR+ EA+++ M + D++T VL A V G+ H ++
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G +++ + ++LI Y C + +F V+D ++WN +I + GL ++
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 130 FRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
+M + ++P V+ S++PACA L L GK LH G D+N+ + +++LDMY
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYC 259
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KC +I A+ +F+++ D++SWT+++ G A G +A++LF++M+ + ++ + + V
Sbjct: 260 KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVG 319
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL+AC+ G +D+ Y + + + I A+ D+ + G + A + M
Sbjct: 320 VLSACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR-- 376
Query: 309 PTENV--WLTLLSACRVHKNVELA 330
NV W L+ +H + E A
Sbjct: 377 -VRNVFTWNALIGGLAMHGHGEDA 399
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSII 114
+ K K+ H +R L N S LI+ A + + +LF + D N++I
Sbjct: 24 ISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMI 83
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G ++ E + + M+ + + ++ ++ ACA L + LG++ H +++NGF
Sbjct: 84 RGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFG 143
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+ Y CG+ A +FD+ + D+V+W +I + G + A L ++M
Sbjct: 144 SDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM 203
Query: 235 EK-DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
K D ++P+ V V+++ AC+ G +++ + +S +K+ G+ + A+ D+ +
Sbjct: 204 TKLDNLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKELGLDENLRVNNAILDMYCKCD 262
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSA 320
++ A E + + + W ++LS
Sbjct: 263 DIESAQEVFNRIREKDVLS-WTSMLSG 288
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++ +WN +I GLA +G E+A+++ QM + L PD T ++L + V +G
Sbjct: 375 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434
Query: 61 KEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
+ + + I ++ C+ +++ + +V+D+ +P+K +++ W +++
Sbjct: 435 LAMFQAMKNKFQIEPRMEHYGCV----VDLLCRARKVDDALAFIENMPIKANSVLWATLL 490
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKP----RHVSFSSIMPACAHLT-TLHLGKQL 164
C G FD K R+++ +++P R+V S++ + L L KQ+
Sbjct: 491 GACRSGGHFDLAEKIGRRVI--ELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 543
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA--KCGNIRLARCIFDKMDLHDIVS 210
H T++ KQ H ++R N +S L+ A G++ AR +F +M D
Sbjct: 19 THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+I G A N ++A+SL+ M + GV ++ + VL AC+ G +
Sbjct: 79 CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAV 127
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 326/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++ WN++I G + G EA+++ M L+ + TLS++L A
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +I+ G + + +SL++ Y KC +ED+ ++F + P +D +++ S+I Q
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E LK + +M IKP FSS+ ACA+L+ GKQ+H +++ G ++F
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MYAKCG+I A CIF+++ IVSW+A+I G A HG+ A+ LF QM K+G+
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGIL 589
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V+VL+AC+HAGL+ +A +F M K +GI P+ EHYA + D+LGR G+L EA
Sbjct: 590 PNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMV 649
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M + VW LL A R+HKN+EL AE + ++P G +++L+N YA+
Sbjct: 650 LVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGM 709
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R M+N +KK P SWIE+K+K Y F+ GD+SHP I L +L ER+
Sbjct: 710 WDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTS 769
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP + LHDVE+ +K+ LL++HSE+LA+ FG+I TP G IR+ KNLRVC DCHTA
Sbjct: 770 AGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTA 829
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ REIIVRD +RFHHF DG CSCGDYW
Sbjct: 830 FKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 149/294 (50%), Gaps = 42/294 (14%)
Query: 5 DLVSWNTVIVGLARNGLYEEAL-------------------------------------- 26
DLVSW+ +I G +NG EEAL
Sbjct: 112 DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIH 171
Query: 27 --NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
+V +M + + P+ F+LS+VL A D G ++HGY I+ G D++ ++L++
Sbjct: 172 RVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MYAK E + +F +P D +SWN++IAGCV + D LK +M ++ P +
Sbjct: 232 MYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFT 291
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
SS + ACA + + LG+QLH +++ + + F+ L+DMY+KCG ++ AR +FD M
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP 351
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL--TACSHA 256
D++ W ++I G + G +A+SLF M K+G++ N +L TA S A
Sbjct: 352 XKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQA 405
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 142/255 (55%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWN VI G + + AL ++ +MG+ + P FTLSS L A V G
Sbjct: 249 IPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLG 308
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H ++ ++ + +G LI+MY+KC ++D+ +F L+P KD I WNSII+G
Sbjct: 309 RQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNC 368
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F M ++ + S+I+ + A +Q+H I++G+ + ++A
Sbjct: 369 GYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVA 428
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SLLD Y KC + A +F+ D+V++T++I + +G +A+ ++ +M+ +K
Sbjct: 429 NSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIK 488
Query: 241 PNSVAFVAVLTACSH 255
P++ F ++ AC++
Sbjct: 489 PDAFIFSSLFNACAN 503
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 83 INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
+N+Y+KC + +L D +SW+++I+G VQNG +E L + +M + K
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 143 VSFSSIMPACAHLTTLHLGKQLH------------------------------------- 165
+FSS++ C+ L LGKQ+H
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 166 ---GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
G +I+ G+D + F A++LLDMYAK G A +F ++ DIVSW AVI G LH
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
A+ L +M V P+ + L AC+ GL+ +++ K + P
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK-MDMEPDSFVG 327
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ D+ + G LQ+A + ++ VW +++S
Sbjct: 328 VGLIDMYSKCGLLQDA-RMVFDLMPXKDVIVWNSIISG 364
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/522 (44%), Positives = 336/522 (64%), Gaps = 12/522 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V+W+ VI G A+ GL EAL++ RQM +P+ TL S+L A ++ GKE H
Sbjct: 350 NVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETH 409
Query: 65 GYAIRH--GLDAN-----VCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSIIA 115
+AI+ LD N + + ++LI+MY+KC + + +F L+P KD ++W +I
Sbjct: 410 CHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIG 469
Query: 116 GCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
G Q+G +E L+ F QML + P + S + ACA L L G+Q+H ++RN F
Sbjct: 470 GNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRF 529
Query: 174 DDNM-FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+ M F+A+ L+DMY+K G++ AR +FD M + VSWT+++ G +HG +A+ +F
Sbjct: 530 ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFY 589
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M+K + P+ V FV VL ACSH+G++D+ +YFN M KD+G+ P EHYA + DLL RA
Sbjct: 590 EMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRA 649
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G+L EA E I M PT VW+ LLSACRV+ NVEL A ++ ++ N G+Y +LS
Sbjct: 650 GRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLS 709
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA AR WKD A +R M+N G+KK P CSW++ + F AGD SHP +I + L+
Sbjct: 710 NIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLR 769
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+L++R++ GYVPD + LHDV++E+K +LL HSE+LA+ +GI+ T G IRI KNLR
Sbjct: 770 DLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLR 829
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CGDCH+A +IS I++ EIIVRD+SRFHHF++G CSC YW
Sbjct: 830 ACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 203/404 (50%), Gaps = 62/404 (15%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGK 61
V DLVSWN+++ + G A+ + +M ++ ++PD+ +L +VLP A +GK
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++HGYA+R GL +V +G+++++MYAKC +E+++++F + VKD +SWN+++ G Q G
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330
Query: 122 LFD-----------------------------------EGLKFFRQMLIAKIKPRHVSFS 146
FD E L FRQML+ +P V+
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390
Query: 147 SIMPACAHLTTLHLGKQLHGCIIR-------NGFDDNMFIASSLLDMYAKCGNIRLARCI 199
S++ CA TL GK+ H I+ N D++ + ++L+DMY+KC + + AR +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450
Query: 200 FDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEK--DGVKPNSVAFVAVLTACSH 255
FD + D +V+WT +I GNA HG A++A+ LF QM + + V PN+ L AC+
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYA-----AVADLLGRAGKLQEAYEFISNMHAGPT 310
G + F Y + FE + D+ ++G + A NMH
Sbjct: 511 LGALR-----FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNG 565
Query: 311 ENVWLTLLSACRVHKNVELAGKV---AEKIFMIDPNNMGAYVIL 351
+ W +L++ +H E A ++ +K+ ++ P+ + V+L
Sbjct: 566 VS-WTSLMTGYGMHGRGEEALQIFYEMQKVXLV-PDGVTFVVVL 607
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 146/265 (55%), Gaps = 4/265 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN +I G E+ L + R+M + +PD +T VL + G +H
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL---PVKDAISWNSIIAGCVQNGLFDE 125
G + NV +G+ L++MY +C E++ ++F + V D +SWNSI+A +Q G
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 126 GLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+K F +M I+P VS +++PACA + GKQ+HG +R+G +++F+ ++++
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + A +F++M + D+VSW A++ G + G DA+ LFE++ ++ ++ N V
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSM 269
+ AV+ + GL +A F M
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQM 377
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 322/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL +GL EE+L M ++PD + L S+ A DV+ G
Sbjct: 134 MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSG 193
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C + D LP + +S N+ I+G QN
Sbjct: 194 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQN 253
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L+FF M A ++ V+F S + +C+ L L G+Q+H I+ G D + +
Sbjct: 254 GDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVM 313
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY++CG + + + + D+V +A+I HG+ A+ LF+QM G +
Sbjct: 314 TSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAE 373
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L ACSH+GL D+ + F MTK YG+ PS +HY + DLLGR+G L EA +
Sbjct: 374 PNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAED 433
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ K ++A ++AE++ +DP++ +YV+LSN A + R
Sbjct: 434 LILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSR 493
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D + +R MR + ++K P SW+E+K + + F GD+SH I E L+E++ R+ Q
Sbjct: 494 WEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQ 553
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD V HD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 554 CGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVA 613
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +SK++ REI+VRD SRFHHF+DGKCSCGDYW
Sbjct: 614 IKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 146/335 (43%), Gaps = 41/335 (12%)
Query: 24 EALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
+AL ++RQ+ D FT + +L +AD D + + + NV
Sbjct: 56 QALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKR----NVMSW 111
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+ LI Y K +E + +LF +P ++ +WN+++AG +GL +E L FF M ++
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 171
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG +R
Sbjct: 172 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 231
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS----- 254
+ +IVS I G +G+A A+ F M GV+ N+V FV+ +T+CS
Sbjct: 232 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 291
Query: 255 ------HAGLI----DKAWSYFNSMTKDY---GIAPSFEHY------------AAVADLL 289
HA I DK S+ Y G E +A+
Sbjct: 292 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 351
Query: 290 GRAGKLQEAYEFISNMHAG---PTENVWLTLLSAC 321
G G Q+A M A P E +LTLL AC
Sbjct: 352 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYAC 386
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/510 (42%), Positives = 324/510 (63%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ +WNT+I G A + A RQM ++PD+ T +L + ++V +G+ IH
Sbjct: 82 NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIH 141
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR+G ++ V + +SL+++YA C E ++++F L+ +D ++WNS+I G NG +
Sbjct: 142 SVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPN 201
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+M + ++P + S++ A A L L LG+++H +++ G N + +SLL
Sbjct: 202 EALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLL 261
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKCG IR A+ +F +M + VSWT++I+G A++G +A+ LF++ME G+ P+ +
Sbjct: 262 DLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEI 321
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL ACSH G++D+ + YF M ++ GI P EHY + DLL RAG +++AYE+I N
Sbjct: 322 TFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQN 381
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W TLL AC +H ++ L + ++P + G YV+LSN YA+ RRW D
Sbjct: 382 MPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDV 441
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M G+KKTP S +E+ N+ Y F GD+SHP + L+++ E ++ EGYV
Sbjct: 442 QVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYV 501
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P T VL D+EEE+K+ L YHSE++AI F ++ TP GT IR++KNLRVC DCH AIK I
Sbjct: 502 PHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLI 561
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KI REI++RD SRFHHF G CSC DYW
Sbjct: 562 AKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 139/249 (55%), Gaps = 3/249 (1%)
Query: 59 KGKEIHGYAIRHGLDANVC-IGSSLI-NMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
K K+IH ++IRHG+ N +G LI + + A + ++ +F ++ + +WN+II G
Sbjct: 33 KLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRG 92
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
++ F+RQM+++ ++P ++ ++ A + + G+ +H IRNGF+
Sbjct: 93 YAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESL 152
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ +SLL +YA CG+ A +F+ M D+V+W ++I G AL+G ++A++LF +M
Sbjct: 153 VFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSV 212
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+GV+P+ V++L+A + G ++ + K G++ + ++ DL + G ++
Sbjct: 213 EGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK-VGLSKNSHVTNSLLDLYAKCGAIR 271
Query: 297 EAYEFISNM 305
EA S M
Sbjct: 272 EAQRVFSEM 280
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 120/225 (53%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV+WN++I G A NG EAL + R+M ++PD FT+ S+L A+ + G
Sbjct: 179 MKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELG 238
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y ++ GL N + +SL+++YAKC + ++ R+F + ++A+SW S+I G N
Sbjct: 239 RRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVN 298
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E L+ F++M + P ++F ++ AC+H L G + + G +
Sbjct: 299 GFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEH 358
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ ++ G ++ A M + + V W ++ +HG+
Sbjct: 359 YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 403
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 337/515 (65%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +S+N ++ A NG +E+L + +++ +F +++L I A +++ G
Sbjct: 360 MPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIG 419
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I + + +G+SL++MYAKC +++R+F L ++ ++ W ++I+ VQ
Sbjct: 420 RQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQK 479
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++GLK F +M AKI +++SI+ ACA L +L LGKQLH II +G+ N+F
Sbjct: 480 GLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG 539
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAKCG+I+ A +F +M + + VSW A+I A +G+ + LFE+M + G++
Sbjct: 540 SALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQ 599
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+ +++L ACSH GL+++ YF+SMT+ Y + P EHYA+ D+L R G+ EA +
Sbjct: 600 PDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEK 659
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
++ M P E +W ++L++C +HKN ELA K A ++F M + YV +SN YAAA
Sbjct: 660 LMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAG 719
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W + ++ MR +G+KK PA SW+E+K+K + F A DK+HP I + L EL E+M
Sbjct: 720 EWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMV 779
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GY PD+ LH+V+EE K L YHSER+AI F +I TP+G+ I ++KNLR C DCH
Sbjct: 780 KKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHA 839
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV+REI VRD+SRFHHF DG C+C DYW
Sbjct: 840 AIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 161/322 (50%), Gaps = 6/322 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V++N ++ G ++ G EA+N+ +M V +P FT +++L D+ G
Sbjct: 259 IPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFG 318
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG+ ++ NV + ++L++ Y+K RV ++ +LF +P D IS+N ++ N
Sbjct: 319 QQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWN 378
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F+++ R+ F++++ A L +G+Q+H I + +
Sbjct: 379 GRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVG 438
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG A IF + + V WTA+I G D + LF +M++ +
Sbjct: 439 NSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIG 498
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
++ + +++ AC+ + + + I+ F +A+ D+ + G +++A +
Sbjct: 499 ADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG-SALVDMYAKCGSIKDALQ 557
Query: 301 FISNMHAGPTEN--VWLTLLSA 320
M P N W L+SA
Sbjct: 558 MFQEM---PVRNSVSWNALISA 576
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 138/245 (56%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V+W +I G A+N + EA + +MG + PD +L+++L F ++ V + +++H +
Sbjct: 164 VTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSH 223
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I+ G D+ + + +SL++ Y K + + +LF +P +D++++N+++ G + G E
Sbjct: 224 VIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREA 283
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ F +M +P +F++I+ A L + G+Q+HG +++ F N+F+A++LLD
Sbjct: 284 INLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDF 343
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+K + A +F +M D +S+ ++ A +G +++ LF++++ G + F
Sbjct: 344 YSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403
Query: 247 VAVLT 251
+L+
Sbjct: 404 ATLLS 408
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 98/178 (55%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ +++I Y K + ++ LF + + A++W +I G QN F E F +M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
I P HVS ++++ +++ +Q+H +I+ G+D + +++SLLD Y K ++
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
LA +F+ + D V++ A++ G + G +AI+LF +M++ G +P F A+LTA
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 148 IMPACAHLTTLHLGKQLH----GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
I P +L T + H II+ GF+ N + ++ L+ + + G++ AR +FD+M
Sbjct: 68 IKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEM 127
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+I S +IMG GN +A +LF+ M + +V + ++ + +A+
Sbjct: 128 PHKNIFSTNTMIMGYIKSGNLSEARTLFDSM----FQRTAVTWTMLIGGYAQNNQFREAF 183
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLL 289
F M + +GI P + ++A LL
Sbjct: 184 GLFIEMGR-HGIDPD---HVSLATLL 205
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 324/511 (63%), Gaps = 1/511 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++V+WN +I ++ Y+ A+ + + +KPDS T +S+L + + GK +
Sbjct: 471 QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWV 530
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
IR G ++++ I ++L++M+ C + + LF +P +D +SWN+IIAG VQ+G
Sbjct: 531 QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGEN 590
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+F+ M + +KP ++F+ ++ ACA L G++LH I D ++ + + L
Sbjct: 591 QFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGL 650
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY KCG+I A +F + ++ SWT++I G A HG +A+ LF QM+++GVKP+
Sbjct: 651 ISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDW 710
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ FV L+AC+HAGLI + +F SM KD+ I P EHY + DL GRAG L EA EFI+
Sbjct: 711 ITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFIN 769
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P +W LL AC+VH +VELA KVA+K +DPN+ G YVILSN YAAA WK+
Sbjct: 770 KMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKE 829
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R M ++G+ K P SWIEV + + F + DK+HP I+ L L M++ GY
Sbjct: 830 VTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGY 889
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VPDT+ VLHDVE+ +K++ L +HSERLAI +G++ TP T I I KNLRVCGDCHTA K
Sbjct: 890 VPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKL 949
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKI +R+II RD++RFHHF+DG CSCGD+W
Sbjct: 950 ISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 219/450 (48%), Gaps = 30/450 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL++W ++I GLAR+ +++A N+ + M ++PD S+L + +G
Sbjct: 266 LPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQG 325
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H GLD + +G++L++MY KC +ED+ +F L+ ++ +SW ++IAG Q+
Sbjct: 326 KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E FF +M+ + I+P V+F SI+ AC+ + L G+Q+H II+ G+ + +
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYAKCG++ AR +F+++ ++V+W A+I H +A++ F+ + K+G+K
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S F ++L C ++ + S+ G A+ + G L A
Sbjct: 506 PDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMN 564
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYA 356
++M P ++ W T+++ H + A + + + P+ + + L N A
Sbjct: 565 LFNDM---PERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQI-TFTGLLNACA 620
Query: 357 AARRWKDAASLRVFMRNKGM-----------KKTPACSWIE---------VKNKAYAFVA 396
+ + L + + C I+ K Y++ +
Sbjct: 621 SPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTS 680
Query: 397 GDKSHPFYHRINEALKELLERMEQEGYVPD 426
+ + R EAL EL +M+QEG PD
Sbjct: 681 MITGYAQHGRGKEAL-ELFCQMQQEGVKPD 709
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 179/335 (53%), Gaps = 12/335 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SWN ++ G ++ YEEA + QM +KPD +T +L AD +V KG
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ + G D ++ +G++LINM+ KC V+D+ ++F LP +D I+W S+I G ++
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + F+ M ++P V+F S++ AC H L GK++H + G D +++
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MY KCG++ A +F+ + ++VSWTA+I G A HG +A F +M + G++
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA-- 298
PN V F+++L ACS + + + + K G A+ + + G L +A
Sbjct: 405 PNRVTFMSILGACSRPSALKQGRQIHDRIIK-AGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 299 -YEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
+E IS +NV W +++A H+ + A
Sbjct: 464 VFERISK------QNVVAWNAMITAYVQHEKYDNA 492
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 183/344 (53%), Gaps = 4/344 (1%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N + L++ G EA+ ++ + + +++ T SS+L + + ++ G+ IH +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+ ++ + + LI+MYAKC + ++F +P KD SWN ++ G VQ+ ++E +
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
QM+ +KP +F ++ ACA + G +L I+ G+D ++F+ ++L++M+ K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CG + A +F+ + D+++WT++I G A H A +LF+ ME++GV+P+ VAFV++
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L AC+H +++ ++ K+ G+ A+ + + G +++A E + N+ G
Sbjct: 313 LKACNHPEALEQG-KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE-VFNLVKGR 370
Query: 310 TENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
W +++ H +E A K+ I+PN + IL
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSIL 414
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT+I G ++G + A + + M +KPD T + +L A + +G
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H LD +V +G+ LI+MY KC ++D+H +F LP K+ SW S+I G Q+
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F QM +KP ++F + ACAH + G + + M
Sbjct: 689 GRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHY 748
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++D++ + G + A +KM + D W A++ +H + A + ++ K +
Sbjct: 749 GCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQK--KLEL 806
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
PN +L+ A + K + + D G+
Sbjct: 807 DPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGV 842
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
+ +K+ N+ + + G E + + I+ ++SS++ C L
Sbjct: 63 FVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGD 122
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
G+++H I + ++F+ + L+ MYAKCGN A+ IFD+M D+ SW ++ G
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
H +A L EQM +DGVKP+ FV +L AC+ A +DK F S+ + G
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF-SLILNAGWDTDLF 241
Query: 281 HYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
A+ ++ + G + +A + +N+ P ++ W ++++ H+ + A
Sbjct: 242 VGTALINMHIKCGGVDDALKVFNNL---PRRDLITWTSMITGLARHRQFKQA 290
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/509 (44%), Positives = 324/509 (63%), Gaps = 1/509 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSW ++I G A+NG EAL + QM N +KPD L S+L + D D+ +G+ IHG
Sbjct: 220 IVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHG 279
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ I+ GL+ + SL YAKC V + F + + I WN++I+G +NG +E
Sbjct: 280 FVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEE 339
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F M+ IKP V+ S + A A + +L L + + + ++ + ++F+ +SL+D
Sbjct: 340 AVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLID 399
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG++ AR +FD+ D+V W+A+IMG LHG +AI+L+ M++ GV PN V
Sbjct: 400 MYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVT 459
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ +LTAC+H+GL+ + W F+ M KD+ I P EHY+ V DLLGRAG L EA FI +
Sbjct: 460 FIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKI 518
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +VW LLSAC++++ V L A K+F +DP N G YV LSN YA++ W A
Sbjct: 519 PIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVA 578
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+RV MR KG+ K S IE+ K AF GDKSHP I + L+ L R+++ G+VP
Sbjct: 579 HVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVP 638
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
T+ VLHD+ E+K+ L +HSER+A+ +G+I T GTT+RI KNLR C +CH+AIK IS
Sbjct: 639 YTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLIS 698
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+V+REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 699 KLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 140/258 (54%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ WN +I +RN +Y + + + R M + PD FT VL + +D IH
Sbjct: 118 DVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIH 177
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G I++G ++V + + L+ +YAKC + + +F L + +SW SII+G QNG
Sbjct: 178 GQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAV 237
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F QM +KP ++ SI+ A + L G+ +HG +I+ G +D + SL
Sbjct: 238 EALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLT 297
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
YAKCG + +A+ FD+M +++ W A+I G A +G+A +A++LF M +KP+SV
Sbjct: 298 AFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSV 357
Query: 245 AFVAVLTACSHAGLIDKA 262
+ + A + G ++ A
Sbjct: 358 TVRSAVLASAQVGSLELA 375
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 108/191 (56%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH + GL N + + L+N + ++ + +LF D WN+II +N
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++ + ++ +R M + P +F ++ AC L L +HG II+ GF ++F+ +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+ +YAKCG+I +A+ +FD + IVSWT++I G A +G A +A+ +F QM +GVKP
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 242 NSVAFVAVLTA 252
+ +A V++L A
Sbjct: 254 DWIALVSILRA 264
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++++ WN +I G A+NG EEA+N+ M + N+KPDS T+ S + A +
Sbjct: 316 MKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELA 375
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + Y + +++ + +SLI+MYAKC VE + R+F KD + W+++I G +
Sbjct: 376 QWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLH 435
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
G E + + M A + P V+F ++ AC H + G +L C+
Sbjct: 436 GQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM 483
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/537 (40%), Positives = 329/537 (61%), Gaps = 53/537 (9%)
Query: 31 QMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
++G+++++PD +L +VLP A + GK +HG A+R G ++ +G++L++MYAKC
Sbjct: 3 KLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCG 62
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD-------------------------- 124
V+++ ++F + KD +SWN+++ G Q G F+
Sbjct: 63 MVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIA 122
Query: 125 ---------EGLKFFRQMLIAK-----------------IKPRHVSFSSIMPACAHLTTL 158
E L FR+M + +KP + S + ACA L L
Sbjct: 123 AFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAAL 182
Query: 159 HLGKQLHGCIIRNGFDDN-MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
LG+Q+H I+RN FD +++A+ L+DMYAK G+I +AR +FD + + VSWT+++ G
Sbjct: 183 RLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTG 242
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
+HG +A+ +F++M + G++P+ V + VL ACSH+G+ID+ +FNSM+K++G+ P
Sbjct: 243 YGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIP 302
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHYA + DLLGRAG+L EA E I M P+ VW+ LLS CR+H NVEL A+++
Sbjct: 303 GQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQL 362
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
++ N G+Y +LSN YA ARRWKD A +R M+N G++K P CSW++ K F
Sbjct: 363 LELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVA 422
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII 457
DK+HP +I E L+ L +R++ GYVP+T LHDV++E+K +LL+ HSE+LA+ +GI+
Sbjct: 423 DKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGIL 482
Query: 458 CTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ G IRI KNLRVCGDCH AI +IS I+ EII+RD+SRFHHF+ G CSC YW
Sbjct: 483 ISAPGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM--GNVN---------------LKPDSFTLSSV 47
++VSW+ VI A+ GL E L++ R+M G N +KP+ FT+S
Sbjct: 113 NVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCA 172
Query: 48 LPIFADYVDVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
L A + G++IH Y +R+ D A + + + LI+MYAK ++ + +F L K+
Sbjct: 173 LIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKN 232
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SW S++ G +G E L+ F +M ++P V+ ++ AC+H + G +
Sbjct: 233 FVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFN 292
Query: 167 CIIRN-GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
+ + G + ++D+ + G + A + + M + + W A++ G +H N
Sbjct: 293 SMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANV 352
Query: 225 ----HDAISLFE-QMEKDG 238
H A L E E DG
Sbjct: 353 ELGEHAAKQLLELNSENDG 371
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 330/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D++ W+ +I A++ E+A + +M ++ P+ F+LS VL A+ + G
Sbjct: 312 IPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I+ G ++ + +G++L+++YAKC +E+S +F L + +SWN+II G Q+
Sbjct: 372 QQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQS 431
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L F++M A + V+FSS++ ACA+ ++ Q+H I ++ F+++ +
Sbjct: 432 GFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVC 491
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D YAKCG IR A +F+ + D+VSW A+I G ALHG A DA+ LF +M K K
Sbjct: 492 NSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTK 551
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V FVA+L+ C GL+++ S FNSMT D+ I PS +HY + LLGRAG+L +A +
Sbjct: 552 PNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALK 611
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI ++ + P+ VW LLS+C VHKNV L AEK+ I+P + YV+LSN YAAA
Sbjct: 612 FIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGI 671
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
A LR MRN G+KK SW+E+K + +AF G HP IN L+ L + +
Sbjct: 672 LDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASR 731
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VLHDV+EE+K +L+ HSERLA+ +G+ TP G IRI+KNLR C DCHT
Sbjct: 732 EGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTV 791
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIVQREI+VRD +RFHHF++G CSCGDYW
Sbjct: 792 FKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 145/255 (56%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V+W ++ + N + E+ALN +M KP+ F L+SVL + GK IH
Sbjct: 215 DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIH 274
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ D +G +L++MYAKC +ED+ +F ++P D I W+ +I+ Q+ +
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNE 334
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M+ + + P S S ++ ACA++ L LG+Q+H +I+ G++ +F+ ++L+
Sbjct: 335 QAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALM 394
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKC N+ + IF + + VSW +I+G G A DA+S+F++M V V
Sbjct: 395 DVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQV 454
Query: 245 AFVAVLTACSHAGLI 259
F +VL AC++ I
Sbjct: 455 TFSSVLRACANTASI 469
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 157/318 (49%), Gaps = 2/318 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VS+ T++ G A G +EEA + R++ + + F L+++L +
Sbjct: 110 MPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLT 169
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH A + G D N +GSSLI+ Y+ C V + +F + KDA++W ++++ +N
Sbjct: 170 CCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEN 229
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ ++ L F +M +A KP +S++ A L++ LGK +HGC ++ D +
Sbjct: 230 DIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVG 289
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LLDMYAKCG I AR +F+ + D++ W+ +I A A +F +M + V
Sbjct: 290 GALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVV 349
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + VL AC++ +D N + K G A+ D+ + ++ + E
Sbjct: 350 PNEFSLSGVLQACANVAFLDLGQQIHNLVIK-LGYESELFVGNALMDVYAKCRNMENSLE 408
Query: 301 FISNMHAGPTENVWLTLL 318
++ E W T++
Sbjct: 409 IFRSLRDA-NEVSWNTII 425
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 38 KPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDA--NVCIGSSLINMYAKCARVEDS 95
K DS+ + +L D G+ +H ++ G A + + L+N+YAK + +
Sbjct: 44 KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
RLF +P ++ +S+ +++ G G F+E FR++ + H ++I+ +
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L +H C + G D N F+ SSL+D Y+ CG + ARC+FD + D V+WTA++
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ + DA++ F +M G KPN +VL A
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/509 (43%), Positives = 327/509 (64%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSW T+I A+ L EA+ + R+M ++KP+ TL +VL A D+ K++H
Sbjct: 203 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHK 262
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
Y G+ + + S+L+++Y KC + LF +P K+ WN +I G V++ ++E
Sbjct: 263 YIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEE 322
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L F +M ++ +K V+ +S++ AC HL L LGK LH I + + ++ + ++L+D
Sbjct: 323 ALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVD 382
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG+I A +F +M D+++WTA+I+G A+ G A+ LF +M+ VKP+++
Sbjct: 383 MYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAIT 442
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
FV VL ACSHAGL+++ +YFNSM YGI PS EHY + D+LGRAG++ EA + I NM
Sbjct: 443 FVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P V + LLSACR+H N+ +A + A+++ +DP N G YV+LSN Y++ + W+ A
Sbjct: 503 PMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAK 562
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R M + +KK P CS IEV + FV GD SHP I E L +++ R++ GYVP
Sbjct: 563 KMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVP 622
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
D EVL D++E++K+N L HSE+LAI FG++ T GT IR++KNLRVC DCH+A+KFIS
Sbjct: 623 DKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFIS 682
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ REIIVRD +RFHHF G CSC D+W
Sbjct: 683 EVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 160/320 (50%), Gaps = 9/320 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + N++I G L +A+ + M L PD FT S +F + +G
Sbjct: 100 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPS---LFKSCGVLCEG 156
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H ++ + G ++ I ++L+NMY+ C + + ++F + K +SW ++I Q
Sbjct: 157 KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 216
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L E +K FR+M IA +KP ++ +++ ACA L KQ+H I G + +
Sbjct: 217 DLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLT 276
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+D+Y KCG LAR +F+KM ++ W +I G+ + +A+SLF +M+ GVK
Sbjct: 277 SALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVK 336
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ V ++L AC+H G ++ + + + I A+ D+ + G ++ A
Sbjct: 337 GDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMR 395
Query: 301 FISNMHAGPTENV--WLTLL 318
M P ++V W L+
Sbjct: 396 VFQEM---PEKDVMTWTALI 412
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L WN +I G + YEEAL++ +M +K D T++S+L + G
Sbjct: 299 MPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELG 358
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y + ++ +V +G++L++MYAKC +E + R+F +P KD ++W ++I G
Sbjct: 359 KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMC 418
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFI 179
G + L+ F +M ++++KP ++F ++ AC+H ++ G + + G ++
Sbjct: 419 GQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEH 478
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGN 223
++DM + G I A + M + D ++ +HGN
Sbjct: 479 YGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN 523
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/513 (42%), Positives = 329/513 (64%), Gaps = 1/513 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +W+++I A+N L +L +R+M +L+PD L S GK
Sbjct: 77 PQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGK 136
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H +++ G DA+V +GSSL++MYAKC + + ++F +P+++ ++W+ ++ G Q G
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMG 196
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L F++ L + SFS+++ CA+ T L LG+Q+ G I++ FD + F+ S
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGS 256
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ +Y+KCG++ A +FD++ + ++ W A++ A H + I LF++M+ G+KP
Sbjct: 257 SLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKP 316
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
N + F+ VL ACSHAGL+D+ YF+ M K+ I P+ +HYA++ D+LGRAGKL+EA E
Sbjct: 317 NFITFLNVLNACSHAGLVDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEI 375
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
++NM PTE+VW LL++C +HKN ELA A+K+F + P + G ++ LSN YAA R+
Sbjct: 376 VTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DAA R +R++G KK SW+E +NK + F AG++ H I E L EL E ME+
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKA 495
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV DT VL +V+ ++K + YHSERLAI FG+I P IR++KNLRVCGDCH AI
Sbjct: 496 GYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAI 555
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S +R IIVRDN+RFH FEDGKCSC DYW
Sbjct: 556 KFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 148/278 (53%), Gaps = 14/278 (5%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
++KG ++HGY ++ GL + ++LIN Y+K DS R F P K A +W+SII+
Sbjct: 31 IVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISC 90
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
QN L L+F R+M+ ++P S +C L+ +GK +H ++ G+D +
Sbjct: 91 FAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDAD 150
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ SSL+DMYAKCG I AR +FD+M L ++V+W+ ++ G A G +A+ LF++
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRA 292
+ + N +F V++ C+++ L++ + I SF+ + V L +
Sbjct: 211 ENLAVNDYSFSTVISVCANSTLLE-----LGRQIQGLCIKSSFDSSSFVGSSLVSLYSKC 265
Query: 293 GKLQEAYEFISNMHAGPTEN--VWLTLLSACRVHKNVE 328
G L+ AY+ + P N +W +L AC H + +
Sbjct: 266 GDLEGAYQVFDEV---PMRNLGIWNAMLKACAQHSHTQ 300
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 127/228 (55%), Gaps = 1/228 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ ++V+W+ ++ G A+ G EEAL + ++ NL + ++ S+V+ + A+ + G
Sbjct: 177 MPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELG 236
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I G I+ D++ +GSSL+++Y+KC +E ++++F +P+++ WN+++ C Q+
Sbjct: 237 RQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQH 296
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ ++ F++M ++ +KP ++F +++ AC+H + GK + + +
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHY 356
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDA 227
+SL+DM + G + A I M + S W A++ +H N A
Sbjct: 357 ASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELA 404
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/516 (43%), Positives = 329/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWN+++ +N AL + +M ++ + PD TL S+ + A+ + +
Sbjct: 301 MKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSS 360
Query: 61 KEIHGYAIRH-GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ IHG+ R ++ +G+++I+MYAK ++ + ++F LPVKD ISWNS+I G Q
Sbjct: 361 RSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQ 420
Query: 120 NGLFDEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL +E + + M + P ++ SI+ A + L L G + HG +I+N ++F
Sbjct: 421 NGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIF 480
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+++ L+DMY KCG + A +F ++ VSW A+I + LHG A+ LF++M+ +G
Sbjct: 481 VSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEG 540
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ + FV++L+ACSH+GL+D+ F M + YGI PS +HY + DL GRAG L++A
Sbjct: 541 VKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKA 600
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ F+ NM P +VW LL ACR+H+NVEL V++ + ++ N+G YV+LSN YA
Sbjct: 601 FNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKL 660
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
W+ +R R++G+KKTP S IEV K F G+++HP I L+ L +M
Sbjct: 661 GHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKM 720
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD VL DVE+++K+N+L HSERLA+ FGII TP TT++I KNLRVCGDCH
Sbjct: 721 KSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCH 780
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFISKI +REIIVRD++RFHHF+DG CSCGDYW
Sbjct: 781 NATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 162/300 (54%), Gaps = 3/300 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+ +WN +I G NG EAL + +M ++ DS T+SS+LPI D+I G
Sbjct: 200 MMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG 259
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH YAI+ GL+ ++ + ++LINMYAK + + +F + V+D +SWNS++A QN
Sbjct: 260 VLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQN 319
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
L + +M + P ++ S+ A L + +HG + R F ++ +
Sbjct: 320 KKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIAL 379
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDG 238
++++DMYAK G I AR +F+ + + D++SW ++I G + +G A++AI ++ M G
Sbjct: 380 GNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSG 439
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN +V++LTA S G + + + K++ F + D+ G+ GKL +A
Sbjct: 440 AVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS-TCLVDMYGKCGKLADA 498
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 162/323 (50%), Gaps = 9/323 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+ D+ +WN++I AR G + A++ + + + L+ D +T V+ + D
Sbjct: 101 IQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD--- 157
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H ++ G + +V I +S I+ Y++ V + LF + ++D +WN++I+G
Sbjct: 158 GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYL 217
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L+ F +M + V+ SS++P C L + G +H I+ G + ++F+
Sbjct: 218 NGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFV 277
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L++MYAK G +R A IF++M + DIVSW +++ + A+ ++ +M GV
Sbjct: 278 CNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGV 337
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + V++ + + G + S +T+ A+ D+ + G + A
Sbjct: 338 VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSAR 397
Query: 300 EFISNMHAGPTENV--WLTLLSA 320
+ + P ++V W +L++
Sbjct: 398 KVFEGL---PVKDVISWNSLITG 417
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
IF V K++H + G ++ + + LIN YA + + F + KD +
Sbjct: 49 IFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYT 108
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
WNS+I+ + G F + F + L + ++ H +F ++ AC +L G+++H +
Sbjct: 109 WNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLV 165
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
++ GF+ +++IA+S + Y++ G + LA +FD M + DI +W A+I G L+G +A+
Sbjct: 166 LKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEAL 225
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA--AVA 286
+F++M V +SV ++L C +D S + F+ + A+
Sbjct: 226 EVFDEMRFKSVSMDSVTISSLLPICVQ---LDDIISGVLIHVYAIKLGLEFDLFVCNALI 282
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI 340
++ + G+L+ A + M + W +LL+A +K +A V K+ I
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVS-WNSLLAAFEQNKKPVIALGVYNKMHSI 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
+ R + F+ I C T +HL KQLH ++ +G ++F+++ L++ YA G+I AR
Sbjct: 40 EKREIDFNRIFLYC---TKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARL 96
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF-EQMEKDGVKPNSVAFVAVLTACSHAG 257
FD++ D+ +W ++I A G+ H A+ F E + ++ + F V+ AC G
Sbjct: 97 TFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---G 153
Query: 258 LIDKAWSYFNSMTK-----DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
+D + K D IA SF H+ + R G + A NM
Sbjct: 154 NLDDGRKVHCLVLKLGFECDVYIAASFIHFYS------RFGFVSLACNLFDNMMIRDI-G 206
Query: 313 VWLTLLSACRVHKNVELAGKVAEKIFMID 341
W ++S L GKVAE + + D
Sbjct: 207 TWNAMISG------FYLNGKVAEALEVFD 229
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/515 (43%), Positives = 327/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
M +VSW T+I A+ EA+ + R M + N+KP+ TL +VL A D+
Sbjct: 146 MEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAM 205
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K IH Y HG +V + + L+++Y KC V+ + LF K+ SWN +I G V+
Sbjct: 206 VKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVE 265
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ ++E L FR+M IK V+ +S++ AC HL L LGK LH I + D ++ +
Sbjct: 266 DSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVAL 325
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG+I A +F +M D+++WTA+I+G A+ G A +A+ F++M GV
Sbjct: 326 GTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGV 385
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+++ FV VL ACSHAG +D+ S+FNSM+ YGI P+ EHY + D+LGRAG++ EA
Sbjct: 386 KPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAE 445
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I +M P + V LL ACR+H N+E A + A+++ IDP + G YV+LSN Y +++
Sbjct: 446 ELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSK 505
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++A R M +GM+K P CS IEV + FV GD SH INE L++++ +++
Sbjct: 506 KWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLK 565
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD EVL D+ EE+K+ L HSE+LAI FG++ T GT IR++KNLR+C DCH+
Sbjct: 566 NAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHS 625
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISK+ REIIVRD +RFHHF+DG CSC +W
Sbjct: 626 ATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 168/321 (52%), Gaps = 10/321 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + N++I G L++EAL ++M L PD +T S +F + +G
Sbjct: 48 IPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPS---LFKSCRNSSEG 104
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH ++ + G ++ ++L+NMY+ C + + ++F + K +SW ++I Q
Sbjct: 105 KQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQW 164
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E ++ F +M+ ++ +KP V+ +++ ACA L + K++H I +GF ++ +
Sbjct: 165 DQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVL 224
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+D+Y KCG ++LAR +FDK ++ SW +I G+ N +A+ LF +M+ G+
Sbjct: 225 NTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGI 284
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
K + V ++L AC+H G ++ + ++ K I A+ D+ + G ++ A
Sbjct: 285 KGDKVTMASLLLACTHLGALELG-KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETA- 342
Query: 300 EFISNMHAGPTENV--WLTLL 318
I H P ++V W L+
Sbjct: 343 --IQVFHEMPEKDVMTWTALI 361
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K+IH +R GL + S ++ + + ++ + +F +P + + NSII GC
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
L E L F+++M++ + P +F S+ +C + + GKQ+H + GF + +
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTY 121
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-D 237
++L++MY+ CG + AR +FDKM+ +VSW +I +A ++A+ LF++M K +
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 238 GVKPNSVAFVAVLTACSHA 256
VKPN V V VLTAC+ A
Sbjct: 182 NVKPNEVTLVNVLTACARA 200
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 317/514 (61%), Gaps = 33/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN+++ G A++G +++AL I ++M ++NL D+ T++S+ P+
Sbjct: 198 MPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV---------- 247
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
VC Y V+ H +F + K+ ISWN +IA V N
Sbjct: 248 ---------------VC--------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +E + F QM +KP V+ +S++PAC L+ L LG++LH I + N+ +
Sbjct: 285 SMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLE 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAKCG + AR +FDKM L D+VSWT+++ G +DA++LF +M G
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQN 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV+VL+ACSH GL+D+ YF MT+ YGI P EH+A + DL GRAG+++EAY
Sbjct: 405 PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYS 464
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P E VW LLSACRVH +++ A+ +F + P G YV+LSN YA A
Sbjct: 465 FIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGM 524
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD ++R M+ G+KK P S +E+ + + F+AGD+ HP I L L+ +M++
Sbjct: 525 WKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE 584
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P T+ LHDVE E K+ L HSE+LAIVF I+ T GT IRI KNLRVCGDCH A
Sbjct: 585 LGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIA 644
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R IIVRD +RFHHF +G CSCGDYW
Sbjct: 645 IKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 148/316 (46%), Gaps = 35/316 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V +N +I N LY EAL+I + M + PD +T VL + ++ G ++H
Sbjct: 101 NVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVH 160
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ GLD N+ IG++L+ MY KC + ++ ++ +P +D +SWNS++AG Q+G FD
Sbjct: 161 DAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFD 220
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ ++M + + +S+ P
Sbjct: 221 DALEICKEMDSLNLNHDAGTMASLSPVVC------------------------------- 249
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
Y N++ +F++M +++SW +I + ++A+SLF QME+ G+KP++V
Sbjct: 250 --YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++L AC + + K + P+ A+ D+ + G L+EA +
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKG-NLQPNLLLENALLDMYAKCGCLEEARDVFDK 366
Query: 305 MHAGPTENVWLTLLSA 320
M + W +++SA
Sbjct: 367 MRLRDVVS-WTSMMSA 381
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDS 95
LK + F+ + I Y + ++H I L + + L+ Y+ +
Sbjct: 31 LKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVA 90
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F K+ + +N +I V N L+ E L F+ ML P H +F ++ AC+ L
Sbjct: 91 RYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGL 150
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L +G Q+H I++ G D N+FI ++L+ MY KCG +R AR + D+M D+VSW +++
Sbjct: 151 DNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW--SYFNSMTK 271
G A G DA+ + ++M+ + ++ ++ + L + + + F MTK
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTK 268
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/514 (43%), Positives = 318/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW +I G G + EA+++ R++ +NL PDSFT+ VL D+ G
Sbjct: 173 IPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG 232
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + G+ NV +G+SL++MYAKC +E + +F +P KD +SW ++I G N
Sbjct: 233 EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALN 292
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + F QM +KP + ++ ACA L L LG+ + G + RN F N +
Sbjct: 293 GLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG 352
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+YAKCG++ A +F M D V W A+I G A++G + LF Q+EK G+K
Sbjct: 353 TALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIK 412
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +L C+HAGL+D+ YFNSM + + + PS EHY + DLLGRAG L EA++
Sbjct: 413 PDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQ 472
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM VW LL ACR+H++ +LA +++ ++P N G YV+LSN Y+A +
Sbjct: 473 LIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLK 532
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +AA +R+ M K ++K P CSWIEV + F+ GDK HP +I L EL ++M+
Sbjct: 533 WDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKV 592
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T VL D+EEE+K++ L HSE+LAI FG+I IR++KNLRVCGDCH A
Sbjct: 593 AGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMA 652
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS I REI VRDN+RFH F +G CSC DYW
Sbjct: 653 IKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 182/332 (54%), Gaps = 22/332 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I GL N +++A+ M + P++FT VL A +D+ G +IH +
Sbjct: 80 WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G D +V + +SL+ +YAKC +ED+H++F +P K+ +SW +II+G + G F E +
Sbjct: 140 KGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAID 199
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FR++L + P + ++ AC L L+ G+ +H CI+ G N+F+ +SL+DMYA
Sbjct: 200 MFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYA 259
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ AR +FD M DIVSW A+I G AL+G +AI LF QM+++ VKP+ V
Sbjct: 260 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319
Query: 249 VLTACSH----------AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VL+AC+ +GL+D+ +N + A+ DL + G + A
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLG-----------TALIDLYAKCGSMSRA 368
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+E M VW ++S ++ V+++
Sbjct: 369 WEVFKGMKE-KDRVVWNAIISGLAMNGYVKIS 399
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 123/234 (52%), Gaps = 5/234 (2%)
Query: 76 VCIGSSLINMYAKCA----RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
+C + L+NM +C+ + LF + + WN++I G V N FD+ ++F+
Sbjct: 42 LCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYG 101
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
M P + +F ++ ACA L L LG ++H +++ GFD ++F+ +SL+ +YAKCG
Sbjct: 102 LMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCG 161
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ A +FD + ++VSWTA+I G G +AI +F ++ + + P+S V VL+
Sbjct: 162 YLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLS 221
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
AC+ G ++ + + + G+ + ++ D+ + G +++A M
Sbjct: 222 ACTQLGDLNSG-EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/528 (41%), Positives = 337/528 (63%), Gaps = 18/528 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++W+ VI G A+ G +EAL+ +QM +P+S T+ S+L A + +G E H
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418
Query: 65 GYAIRHGL------------DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISW 110
Y+++ L ++ + ++LI+MY+KC + + +F +P ++ ++W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
+I G Q G ++ LK F +M+ + P + S I+ ACAHL++L +GKQ+H +
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYV 538
Query: 169 IRN-GFDDNM-FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
R+ ++ ++ F+A+ L+DMY+KCG++ AR +FD M + VSWT+++ G +HG +
Sbjct: 539 TRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKE 598
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA 286
A+ +F++M+K G P+ ++F+ +L ACSH+G++D+ YF+ M DYG+ S +HYA V
Sbjct: 599 ALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVI 658
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMG 346
DLL R+G+L +A++ I M P+ +W+ LLSACRVH NVELA K+ + N G
Sbjct: 659 DLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDG 718
Query: 347 AYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHR 406
+Y ++SN YA ARRWKD A +R M+ G+KK P CSW++ K +F GD+SHP
Sbjct: 719 SYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPE 778
Query: 407 INEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIR 466
I L+ L+ R++ GYVP+T LHDV++E+K NLL HSE+LA+ +G++ T G IR
Sbjct: 779 IYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIR 838
Query: 467 IIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I KNLRVCGDCH+A +ISKIV EIIVRD+SRFHHF++G CSCG YW
Sbjct: 839 ITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 144/306 (47%), Gaps = 10/306 (3%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S V WN ++ G + A+ + +M KPD FTL L + G
Sbjct: 112 SPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAF 171
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK---DAISWNSIIAGCVQN 120
HG +G ++NV + ++L+ MY++ +ED+ +F + K D ISWNSI+A V+
Sbjct: 172 HGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKG 231
Query: 121 GLFDEGLKFFRQMLI------AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
L F +M + +S +I+PACA L L K++H IRNG
Sbjct: 232 SNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTF 291
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ F+ ++L+D YAKCG+++ A +F+ M+ D+VSW A++ G G A LF+ M
Sbjct: 292 ADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNM 351
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ + + + + AV+ + G +A F M YG P+ ++ G
Sbjct: 352 RKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMIL-YGSEPNSVTIISLLSACASLGA 410
Query: 295 LQEAYE 300
L + E
Sbjct: 411 LSQGME 416
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 111/237 (46%), Gaps = 10/237 (4%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+G+ ++ Y C D+ + + A+ WN ++ ++ G D + +ML A
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
KP H + + AC L + G HG I NGF+ N+F+ ++L+ MY++ G++ A
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 198 CIFDKMD---LHDIVSWTAVIMGNALHGNAHDAISLFEQM------EKDGVKPNSVAFVA 248
+FD++ + D++SW +++ + N A+ LF +M + + + ++ V
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+L AC+ + + + ++ A +F A + D + G +++A + M
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALI-DTYAKCGSMKDAVNVFNVM 320
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/519 (41%), Positives = 334/519 (64%), Gaps = 13/519 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G A+N EEAL + +M + L +S T++ V+P K + IHG+
Sbjct: 368 WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFV 427
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GLD + + ++L++MY++ +++ + R+F + +D ++WN+II G V + ++ L
Sbjct: 428 VKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDAL 487
Query: 128 KFFRQMLI-----------AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+M I +KP ++ +I+P+CA L+ L GK++H I+N +
Sbjct: 488 LMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 547
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+L+DMYAKCG ++++R +FD++ + ++++W ++M +HGN+ DAI + M
Sbjct: 548 VAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMV 607
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GVKPN V F++V ACSH+G++++ F +M KDYG+ PS +HYA V DLLGRAG+++
Sbjct: 608 QGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVK 667
Query: 297 EAYEFISNMHAG-PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EAY+ I+ + W +LL ACR+H N+E+ A+ + ++PN YV+L+N Y
Sbjct: 668 EAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 727
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
++A W A +R M+ +G++K P CSWIE ++ + FVAGD SHP ++ L+ L
Sbjct: 728 SSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLW 787
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
ERM +EGY+PDT VLH+VEE++K+ LL HSE+LAI FGI+ T GT IR+ KNLRVC
Sbjct: 788 ERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCN 847
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFISK+V REII+RD RFHHF++G CSCGDYW
Sbjct: 848 DCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 181/346 (52%), Gaps = 29/346 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WNTV+ L +N + EAL +R+M ++PD FT+SSVLP + + GKE+H
Sbjct: 262 DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELH 321
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
YA+++G LD N +GS+L++MY C +V R+F + + WN++I G QN
Sbjct: 322 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYD 381
Query: 124 DEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+E L F +M A + + + ++PAC + +HG +++ G D + F+ ++
Sbjct: 382 EEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNA 441
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME------- 235
L+DMY++ G I +A+ IF KM+ D+V+W +I G DA+ + +M+
Sbjct: 442 LMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKAS 501
Query: 236 ----KDGVKPNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVA 286
+ +KPNS+ + +L +C+ + K A++ N++ D + +A+
Sbjct: 502 ERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG------SALV 555
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
D+ + G LQ + + + P NV W ++ A +H N + A
Sbjct: 556 DMYAKCGCLQMSRKVFDQI---PIRNVITWNVIVMAYGMHGNSQDA 598
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 160/305 (52%), Gaps = 7/305 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV---DVIKGKEI 63
VSWN++I L +E AL R M + +++P SFTL SV +++ ++ GK++
Sbjct: 161 VSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQV 220
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H Y +R G + N I ++L+ MY K ++ S L +D ++WN++++ QN F
Sbjct: 221 HAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQF 279
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASS 182
E L++ R+M++ ++P + SS++PAC+HL L GK+LH ++NG D+N F+ S+
Sbjct: 280 LEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 339
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKP 241
L+DMY C + +FD M I W A+I G A + +A+ LF +ME+ G+
Sbjct: 340 LVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLA 399
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS V+ AC +G K + + K G+ A+ D+ R GK+ A
Sbjct: 400 NSTTMAGVVPACVRSGAFSKKEAIHGFVVKR-GLDRDRFVQNALMDMYSRLGKIDIAKRI 458
Query: 302 ISNMH 306
M
Sbjct: 459 FGKME 463
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 134/256 (52%), Gaps = 7/256 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG--Y 66
W ++ R+ L EA+ M + +KPD+F ++L AD D+ GK+IH Y
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+G+D+ V + ++L+N+Y KC +++F + ++ +SWNS+I+ ++
Sbjct: 121 KFGYGVDS-VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTT---LHLGKQLHGCIIRNGFDDNMFIASSL 183
L+ FR ML ++P + S+ AC++ L +GKQ+H +R G + N FI ++L
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTL 238
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY K G + ++ + + D+V+W V+ + +A+ +M +GV+P+
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298
Query: 244 VAFVAVLTACSHAGLI 259
+VL ACSH ++
Sbjct: 299 FTISSVLPACSHLEML 314
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ ++++WN +++ +G ++A++++R M +KP+ T SV + V +G
Sbjct: 574 IPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEG 633
Query: 61 KEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
+I Y + D C+ +++ + RV+++++L L+P A +W+S+
Sbjct: 634 LKIFYNMKKDYGVEPSSDHYACV----VDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSL 689
Query: 114 IAGC-VQNGL 122
+ C + N L
Sbjct: 690 LGACRIHNNL 699
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 334/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
MP D SW ++ G + EEAL + M V N KP+ FT+SS + A + +
Sbjct: 179 MPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRR 238
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHG+ +R GLD++ + SSL++MY KC ++++ +F + KD +SW S+I +
Sbjct: 239 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFK 298
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + EG F +++ + +P +FS ++ ACA LTT LG+Q+HG + R GFD F
Sbjct: 299 SSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFA 358
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SSL+DMY KCGNI AR + D D+VS T++I G A +G +A+ F+ + K G
Sbjct: 359 SSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGT 418
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V FV VL+AC+HAGL++K +F S+T+ + + + +HY + DLL R+G+ ++
Sbjct: 419 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLK 478
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+S M P++ +W ++L C + N++LA + A+++F I+P N YV ++N YAAA
Sbjct: 479 SVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 538
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ +R M+ G+ K P SW E+K K + F+A D SHP Y++I E L EL ++M+
Sbjct: 539 KWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMK 598
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGYVP T VLHDVE+EQK+ L YHSE+LA+ F I+ T +GT I++ KNLR C DCH+
Sbjct: 599 EEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHS 658
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFISKI +R+I +RD++RFH FE+G+CSC DYW
Sbjct: 659 AIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 44/337 (13%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNI----------VRQMGNVNLKPDSFTLSSVLPIFAD 53
S L V+ L R + EA+++ V+ +G KP + T +++ + +
Sbjct: 41 SKLEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAK-KPPASTYCNLIQVCSQ 99
Query: 54 YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARV--------------------- 92
+ +GK++H + G + I + ++ MYAKC +
Sbjct: 100 TRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVM 159
Query: 93 ----------EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPR 141
E++ LF +P +D+ SW +++ G V+ +E L + M + KP
Sbjct: 160 VNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPN 219
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+ SS + A A + + GK++HG I+R G D + + SSL+DMY KCG I AR IFD
Sbjct: 220 IFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 279
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
K+ D+VSWT++I + SLF ++ +PN F VL AC+ +
Sbjct: 280 KIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEEL 339
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
MT+ G P +++ D+ + G ++ A
Sbjct: 340 GRQVHGYMTR-VGFDPYSFASSSLIDMYTKCGNIESA 375
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 19/251 (7%)
Query: 126 GLKFFR---QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
G K R Q+L KP ++ +++ C+ L GK++H I +GF + I +
Sbjct: 68 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKP 241
+L MYAKCG++ AR +FD+M D+ SW ++ G A G +A +LF++M E+D
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERD---- 183
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG-----RAGKLQ 296
S ++ A++T ++A ++ M + P+ ++ R GK
Sbjct: 184 -SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGK-- 240
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
E + I E +W +L+ ++ A + +KI ID ++ ++ + + Y
Sbjct: 241 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--ID-KDVVSWTSMIDRYF 297
Query: 357 AARRWKDAASL 367
+ RW++ SL
Sbjct: 298 KSSRWREGFSL 308
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 343/549 (62%), Gaps = 37/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSW ++ G+ + + + R+MG ++ +S T+SS+LP ADY+ + G
Sbjct: 138 MVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL--G 195
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN--------- 111
+E+HG+ +R+ ++ NV + S+L+NMYA ++ + +F + +D +SWN
Sbjct: 196 REVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLN 255
Query: 112 --------------------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
+ I+GC+QNG + L +M + IKP ++
Sbjct: 256 KEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITI 315
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S +P C +L +L GK++HG + R+ F +++ I ++L+ +YAKCG++ L+R +F+ M
Sbjct: 316 VSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPR 375
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+V+W +IM N++HG +++ LF +M GV+PNSV F+ VL+ CSH+ L D+
Sbjct: 376 KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLV 435
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
FNSM+ ++ I P +HY+ + D+L RAG+L+EAY+FI M PT W LL ACRV+K
Sbjct: 436 FNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYK 495
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
NVEL A ++F I+P+N G YV+LSN A++W +A+ +R MR+KG+ KTP SW+
Sbjct: 496 NVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWV 555
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+VKNK Y+FV GDKS+ I L E+ E+M +GY P+T VL +V++EQ++ L
Sbjct: 556 QVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCS 615
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSERLA+ FGI+ + TT+R+ KNLR+CGDCH AIK I+KIV +IIVRD+ RFHHF D
Sbjct: 616 HSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRD 675
Query: 506 GKCSCGDYW 514
G C+C D+W
Sbjct: 676 GYCTCNDFW 684
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 161/278 (57%), Gaps = 3/278 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL +W +I G ++G ++A++I + + N++PD F L SV A D++
Sbjct: 37 IPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVA 96
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH AI+ G + ++ +G++LI+M+ KC V + +F + VKD +SW S+ V
Sbjct: 97 KKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNC 156
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+ +G+ FR+M + I+ ++ SSI+PACA + LG+++HG I+RN + N++++
Sbjct: 157 GMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVS 214
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L++MYA ++ AR +FD M DIVSW ++ L+ + LF QM K+G+K
Sbjct: 215 SALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIK 274
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
N ++ A ++ C G + A M +D GI P+
Sbjct: 275 LNQASWNAAISGCMQNGQHELALGILCKM-QDSGIKPN 311
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 83 INMYAKCARVEDSHR---LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
I + C D R LF +P D +W +I+G Q+G + + + +L ++
Sbjct: 15 IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR 74
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P S+ ACA L + K++H I+ GF+ ++ + ++L+DM+ KC + ARC+
Sbjct: 75 PDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCV 134
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
FD M + D+VSWT++ G I LF +M +G++ NS+ ++L AC+
Sbjct: 135 FDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G+++ A +FDK+ D+ +WT +I G+ HG AI ++ + V+P+ ++V
Sbjct: 25 GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84
Query: 251 TACSHAG 257
AC+ +G
Sbjct: 85 KACAASG 91
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/514 (43%), Positives = 325/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +D++ W+ +I A++G E+AL I QM + P+ FT SSVL AD +
Sbjct: 208 MPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLS 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG+A++ GL +V + ++L+ YAKC +E S LF L ++ +SWN+II VQ
Sbjct: 268 KTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQL 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F ML +++ V++SSI+ ACA L L LG Q+H + + ++ +
Sbjct: 328 GDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVG 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+I+ AR +FD +DL D VSW A+I G ++HG +AI +F M++ K
Sbjct: 388 NALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCK 447
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FV VL+ACS+ G +D+ YF SM +DYGI P EHY + L+GR+G L +A +
Sbjct: 448 PDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVK 507
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI ++ P+ +W LL AC +H +VEL A+++ ++P + ++V+LSN YA ARR
Sbjct: 508 FIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARR 567
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R M+ KG+KK P SWIE + + F D SH IN L+ L + +
Sbjct: 568 WGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRK 627
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P VL DVE+++K+ LL+ HSERLA+ FG++ P G IRIIKNLR+C DCH+
Sbjct: 628 AGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSV 687
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R+IIVRD +RFHHFE+G CSC DYW
Sbjct: 688 IKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 134/250 (53%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW +I A N + EAL QM KP++FT + VL + GK +H
Sbjct: 111 DMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVH 170
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ + ++ +G L+ +Y +C +D+ R F +P D I W+ +I+ Q+G +
Sbjct: 171 CSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSE 230
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ F QM A + P +FSS++ A A + +L L K +HG ++ G ++F++++L+
Sbjct: 231 KALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALM 290
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
YAKCG I + +F+ + + VSW +I+ G+ A+SLF M + V+ V
Sbjct: 291 ACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEV 350
Query: 245 AFVAVLTACS 254
+ ++L AC+
Sbjct: 351 TYSSILRACA 360
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 136/260 (52%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+ T+I G A++ + EA + ++ + + F ++VL + G
Sbjct: 6 MPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELG 65
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG ++ G +N IG++LI+ Y+ V + +F + KD +SW +IA +N
Sbjct: 66 RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAEN 125
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E L+FF QM +A KP + +F+ ++ AC L GK +H +++ ++ ++++
Sbjct: 126 DCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVG 185
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
LL++Y +CG+ A F M +D++ W+ +I A G + A+ +F QM + V
Sbjct: 186 VGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVI 245
Query: 241 PNSVAFVAVLTACSHAGLID 260
PN F +VL A + +D
Sbjct: 246 PNQFTFSSVLQASADIESLD 265
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/523 (43%), Positives = 328/523 (62%), Gaps = 14/523 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W+ I G A+ GL EAL + RQM + +KP+ TL SVL A ++ GKEIH
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 65 GYAIRHGLD--------ANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAISWNSII 114
YAI++ +D N+ I + LI+MYAKC +V+ + +F L K D ++W +I
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 115 AGCVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
G Q+G ++ L+ +M + +P + S + ACA L L +GKQ+H +RN
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 173 FDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ +F+++ L+DMYAKCG+I AR +FD M + V+WT+++ G +HG +A+ +F
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
++M + G K + V + VL ACSH+G+ID+ YFN M +G++P EHYA + DLLGR
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGR 627
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG+L A I M P VW+ LS CR+H VEL AEKI + N+ G+Y +L
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN YA A RWKD +R MR+KG+KK P CSW+E F GDK+HP I + L
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
+ ++R++ GYVP+T LHDV++E+K +LL+ HSE+LA+ +GI+ TP G IRI KNL
Sbjct: 748 LDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNL 807
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVCGDCHTA ++S+I+ +II+RD+SRFHHF++G CSC YW
Sbjct: 808 RVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 185/378 (48%), Gaps = 50/378 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIK 59
M V D+VSWN++I A+ G + AL + +M N +PD+ TL +VLP A
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H +A+ + N+ +G+ L++MYAKC +++++ +F + VKD +SWN+++AG Q
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 120 NGLFDEGLKFF-----------------------------------RQMLIAKIKPRHVS 144
G F++ ++ F RQML + IKP V+
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 145 FSSIMPACAHLTTLHLGKQLHGCII-------RNGFDDNMFIASSLLDMYAKCGNIRLAR 197
S++ CA + L GK++H I +NG D + + L+DMYAKC + AR
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 198 CIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQM-EKD-GVKPNSVAFVAVLTAC 253
+FD + D+V+WT +I G + HG+A+ A+ L +M E+D +PN+ L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 254 -SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
S A L + ++ P F + D+ + G + +A NM A E
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI-DMYAKCGSISDARLVFDNMMA-KNEV 545
Query: 313 VWLTLLSACRVHKNVELA 330
W +L++ +H E A
Sbjct: 546 TWTSLMTGYGMHGYGEEA 563
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 4/302 (1%)
Query: 2 PVSD--LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
P SD + WN++I NG + L + M +++ PD++T V + V
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ H ++ G +NV +G++L+ MY++C + D+ ++F + V D +SWNSII +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 120 NGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G L+ F +M +P +++ +++P CA L T LGKQLH + + NMF
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+DMYAKCG + A +F M + D+VSW A++ G + G DA+ LFE+M+++
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+K + V + A ++ + GL +A M GI P+ +V G L
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHG 384
Query: 299 YE 300
E
Sbjct: 385 KE 386
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 328/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++ +WN +I GL + ++AL++ ++M + PD FTL SVL A ++ G
Sbjct: 154 MSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAG 213
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+H ++ G + + +GSSL +MY K + D +L +P++ ++WN++IAG QN
Sbjct: 214 QEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + M +A +P ++F S++ AC+ L TL G+Q+H +I+ G + +
Sbjct: 274 GCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVV 333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+ MY++ G + + F + D+V W+++I HG +A+ LF QME ++
Sbjct: 334 SSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKME 393
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V F+++L ACSH+GL +K YF+ M K Y + P EHY V DLLGRAG+L+EA
Sbjct: 394 ANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEG 453
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLL+AC++HK E+A +++E+I +DP + +YV+LSN +A+AR
Sbjct: 454 MIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARN 513
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + + +R MR++ ++K P SW+E+KN + F GDKSHP Y I+ LKEL+ ++Q
Sbjct: 514 WLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQ 573
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+ VLHD++ E+K+ L +HSE+ AI F ++ T + IR++KNLRVC DCH A
Sbjct: 574 HGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNA 633
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS+I REIIVRD SRFHHF+DG+CSCG+YW
Sbjct: 634 IKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV + LIN Y + +E + +LF + ++ +WN++IAG Q + L F++M
Sbjct: 127 NVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMY 186
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
P + S++ CA L +L G+++H C+++ GF+ + + SSL MY K G++
Sbjct: 187 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 246
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ M + +V+W +I G A +G + ++ + M+ G +P+ + FV+VL+ACS
Sbjct: 247 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 306
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ + + K G + +++ + R+G L+++
Sbjct: 307 ELATLGQGQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLEDS 349
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS ++ +C L +L GKQ+H II +G + FI++ LL+ Y+K G + + +F M
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++S+ +I G G+ A LF++M + N + A++ + +A S
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSER----NIATWNAMIAGLTQFEFNKQALS 180
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
F M YG+ + + + L G AG
Sbjct: 181 LFKEM---YGLGFLPDEFTLGSVLRGCAG 206
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/513 (41%), Positives = 327/513 (63%), Gaps = 7/513 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V+WN++I G ++G Y+E L + M + KPDS T +L IF+ D+ +G+ IH
Sbjct: 387 DSVTWNSLINGYTQSGYYKEGLESFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIH 445
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ G +A + IG+SL+++YAKC ++D ++F + D ISWN++IA V FD
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVH---FD 502
Query: 125 E---GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ G + +M + P + I+P C+ L GK++HG I ++GF+ N+ I +
Sbjct: 503 DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGN 562
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L++MY+KCG++ +F M D+V+WTA+I ++G A+ F+ ME GV P
Sbjct: 563 ALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLP 622
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+SVAF+A + ACSH+G++ + +F+ M DY + P EHYA V DLL R+G L +A EF
Sbjct: 623 DSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEF 682
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I +M P ++W LLSACR N +A +V++KI ++ ++ G YV++SN YA +W
Sbjct: 683 ILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKW 742
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
++R M+ KG+KK P SWIE++ + Y F GDKS Y ++ + L+ L+ M +E
Sbjct: 743 DQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKE 802
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV D + LHDVEE+ K+++L HSERLAI FG++ T G+ + ++KNLRVCGDCHT
Sbjct: 803 GYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVT 862
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+I+KI+QREI+VRD +RFH F+DG CSCGD+W
Sbjct: 863 KYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 145/256 (56%), Gaps = 1/256 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +++ WN++I L NGL+ +AL +M L+PD+FT SV+ A +D+ G
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H +A+ G ++++ IG++LI+MY++ ++++ +F + +D++SWNS+I+G NG
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+++ L + + + + P + SS++ AC L + G +HG I + G ++ I +
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGN 261
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
LL MY K +R AR +F KM + D V+W +I G A G ++ LF M DG P
Sbjct: 262 GLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVP 320
Query: 242 NSVAFVAVLTACSHAG 257
+ ++ + + AC +G
Sbjct: 321 DMLSITSTIRACGQSG 336
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 14/350 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D V+WNT+I G A+ G +E ++ + M + PD +++S + D+ G
Sbjct: 283 MAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVG 341
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y I G + + + LI+MYAKC + + +F KD+++WNS+I G Q+
Sbjct: 342 KFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQS 401
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + EGL+ F+ M + + KP V+F ++ + L ++ G+ +H +I+ GF+ + I
Sbjct: 402 GYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIG 460
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SLLD+YAKCG + +F M HDI+SW VI + + + +M +G+
Sbjct: 461 NSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLM 520
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + +L CS + + + K G + A+ ++ + G L+ +
Sbjct: 521 PDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIK 579
Query: 301 FISNMHAGPTENVWLTLLS----------ACRVHKNVELAGKVAEKIFMI 340
M W L+S A + +++EL+G + + + I
Sbjct: 580 VFKYMKEKDVVT-WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 34 NVNLKPD---SFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
N N P+ F SS+L + + + + +H I GL +V LI+ YA+
Sbjct: 9 NFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVK 68
Query: 91 RVEDSHRLF-CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
S +F + P + WNSII NGLF + L ++ +M K++P +F S++
Sbjct: 69 DPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVI 128
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
+CA + L LG +H + GF+ +++I ++L+DMY++ ++ AR +F++M D V
Sbjct: 129 NSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSV 188
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
SW ++I G +G DA+ ++ + G+ P+ +VL AC
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLAC 232
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/529 (42%), Positives = 335/529 (63%), Gaps = 15/529 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D SWNT+I GL RNG AL ++ +M + T S L + + + G
Sbjct: 480 LPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLG 539
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP---------------VK 105
K+IH ++ G+ + + +SLI+MY KC +E + +F LP V
Sbjct: 540 KQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVV 599
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+++SW+S+++G VQNG F++ LK F M+ ++++ + +S++ ACA L LG+Q+H
Sbjct: 600 ESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVH 659
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
G I + G ++F+ SS++DMY KCG++ A IF++ ++V WT++I G ALHG
Sbjct: 660 GYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGR 719
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A+ LFE M +G+ PN V+FV VLTACSHAGL+++ YF M + YGI P EH+ +
Sbjct: 720 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCM 779
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM 345
DL GRAG+L E EFI N +VW + LS+CRVHKN+E+ V +K+ ++P +
Sbjct: 780 VDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDA 839
Query: 346 GAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYH 405
G Y++ S+ A RW++AA +R M+ +G+KK P+ SWI++KN+ ++FV GD+SHP
Sbjct: 840 GPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDT 899
Query: 406 RINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTI 465
+I L EL+ R+++ GY D V+ DVE+EQ++ LL YHSE+LAI +GII T GT I
Sbjct: 900 KIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPI 959
Query: 466 RIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R++KNLRVC DCH IK+ S+++ REII+RD RFHHF+ G CSC DYW
Sbjct: 960 RVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 55/403 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIK 59
+P +D+ SW +I G AR GL + L + +M + + P+ FTLS VL + V D
Sbjct: 347 IPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRI 406
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKC------------------------------ 89
GK IHG+ +R+GLD + + +S+++ Y KC
Sbjct: 407 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQ 466
Query: 90 -ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
++ S LF LP KDA SWN++I G ++NG L+ +M+ A ++FS
Sbjct: 467 IGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIA 526
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-- 206
+ + L+ L LGKQ+H +++ G D+ F+ +SL+DMY KCG + A IF +
Sbjct: 527 LVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESS 586
Query: 207 -------------DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+ VSW++++ G +G DA+ F M V+ + +V++AC
Sbjct: 587 MMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSAC 646
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEFISNMHAGPTE 311
+ AG+++ + K I + + +++ D+ + G L +A+ I N
Sbjct: 647 ASAGVLELGRQVHGYIQK---IGHGLDVFLGSSIIDMYVKCGSLNDAW-LIFNQAKDRNV 702
Query: 312 NVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
+W +++S C +H A ++ E + I PN + +L+
Sbjct: 703 VLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLT 745
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 10/213 (4%)
Query: 51 FADYVDVIKGKEIHGYAIRHGLDANVCIG---SSLINMYAKCARVEDSHRLFCLLPVKDA 107
F+D ++ + +H I++G C+G + L+N+YAK +E +H++F +P D
Sbjct: 298 FSDSMNYPNSEVLHAKLIKNG-----CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDV 352
Query: 108 ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA-HLTTLHLGKQLHG 166
SW +I+G + GL + L F +M + P + S ++ +C+ ++ +GK +HG
Sbjct: 353 FSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHG 412
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
I+RNG D + + +S+LD Y KC A +F M D VSW ++ G+
Sbjct: 413 WILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQK 472
Query: 227 AISLFEQME-KDGVKPNSVAFVAVLTACSHAGL 258
++ LF Q+ KD N++ + C L
Sbjct: 473 SVDLFRQLPGKDAASWNTMIDGLMRNGCERVAL 505
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 107 AISWNSIIAGCVQNGLFDE--GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
A+ S++A + G GL F L + P FSS + + L
Sbjct: 254 AVVGGSMLASKISQGTVATVGGLLFLGFSLSSYFYPPLXYFSSTFSDSMNYPN---SEVL 310
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
H +I+NG + LL++YAK N+ A +F+++ D+ SWT +I G A G +
Sbjct: 311 HAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLS 368
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
D + LF +M+ GV PN VL +CS
Sbjct: 369 ADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/511 (41%), Positives = 333/511 (65%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ +WNT+I G A + A+ + QM ++ PD+ T + A +DV G+ I
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H +R+G D+ + +SL++MY+ E ++++F ++ +D ++WNS+I G NG+
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMP 218
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L +R+M ++P + S++ AC L L LG+++H +++ G N +++L
Sbjct: 219 NEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNAL 278
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
LD+Y+KCGN R A+ +FD+M+ +VSWT++I+G A++G ++A+ LF ++E+ G+KP+
Sbjct: 279 LDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSE 338
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ FV VL ACSH G++D+ ++YF M ++YGI P EH+ + DLL RAGK+ +AY++I
Sbjct: 339 ITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIR 398
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
NM P +W TLL AC +H ++EL +I ++ + G +V+LSN YA+ RRW D
Sbjct: 399 NMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLD 458
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
++R M KG+KKTP S +E+KN+ Y F+ GD+SHP L ++ + ++ EGY
Sbjct: 459 VQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGY 518
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP T VL D+EEE+K+ L +H+E++AI F ++ TP GT IRI+KNLRVC DCH AIK
Sbjct: 519 VPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKL 578
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ +REIIVRD SRFHHF+DG CSC DYW
Sbjct: 579 ISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 93/161 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V+WN+VI G A NG+ EAL + R+MG+ ++PD FT+ S+L + + G
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALG 256
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y ++ GL N ++L+++Y+KC D+ ++F + + +SW S+I G N
Sbjct: 257 ERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVN 316
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
GL +E LK F ++ +KP ++F ++ AC+H L G
Sbjct: 317 GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 10/253 (3%)
Query: 59 KGKEIHGYAIRHGL-----DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
K K+IH ++IRHG+ D N + +L+++ A + + ++F + + +WN++
Sbjct: 50 KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFNQIQAPNIFTWNTM 106
Query: 114 IAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
I G ++ ++ F QM A I P +F + A A L + LG+ +H ++RNG
Sbjct: 107 IRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG 166
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
FD F+ +SL+ MY+ G A +F+ M D V+W +VI G AL+G ++A++L+
Sbjct: 167 FDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M +GV+P+ V++L+AC G + M K G+ + A+ DL +
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVK-VGLVQNQHASNALLDLYSKC 285
Query: 293 GKLQEAYEFISNM 305
G ++A + M
Sbjct: 286 GNFRDAQKVFDEM 298
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 317/514 (61%), Gaps = 33/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN+++ G A++G +++AL I ++M ++NL D+ T++S+ P+
Sbjct: 198 MPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV---------- 247
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
VC Y V+ H +F + K+ ISWN +IA V N
Sbjct: 248 ---------------VC--------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +E + F QM +KP V+ +S++PAC L+ L LG++LH I + N+ +
Sbjct: 285 SMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLE 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAKCG + AR +FDKM L D+VSWT+++ G +DA++LF +M G
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQN 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV+VL+ACSH GL+D+ YF MT+ YGI P EH+A + DL GRAG+++EAY
Sbjct: 405 PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYS 464
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P E VW LLSACRVH +++ A+ +F + P G YV+LSN YA A
Sbjct: 465 FIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGM 524
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD ++R M+ G+KK P S +E+ + + F+AGD+ HP I L L+ +M++
Sbjct: 525 WKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE 584
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P T+ LHDVE E K+ L HSE+LAIVF I+ T GT IRI KNLRVCGDCH A
Sbjct: 585 LGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIA 644
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R IIVRD +RFHHF +G CSCGDYW
Sbjct: 645 IKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDS 95
LK + F+ + I Y + ++H I L + + L+ Y+ +
Sbjct: 31 LKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVA 90
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F K+ + +N +I V N L+ E L F+ ML P H +F ++ AC+ L
Sbjct: 91 RYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGL 150
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L +G Q+H I++ G D N+FI ++L+ MY KCG +R AR + D+M D+VSW +++
Sbjct: 151 DNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW--SYFNSMTK 271
G A G DA+ + ++M+ + ++ ++ + L + + + F MTK
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTK 268
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/545 (41%), Positives = 350/545 (64%), Gaps = 35/545 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+VSWN +I G ++G EAL+I +M + + KPD FTL+S L A+ ++ GK+I
Sbjct: 241 DVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQI 300
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVE------------------------------ 93
H + IR D +G++LI+MY+K VE
Sbjct: 301 HAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLG 360
Query: 94 ---DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
+ R+F L V+D ++W ++I G VQNG + ++ FR M+ KP + + ++++
Sbjct: 361 DINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLS 420
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL-HDIV 209
+ L +L G+Q+H R+G ++ ++++L+ MYAK G+I AR +F+ + D +
Sbjct: 421 VSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTI 480
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+WT++I+ A HG +A++LFE+M ++G+KP+ + +V VL+AC+H GL+++ SY+N M
Sbjct: 481 TWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLM 540
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ I P+ HYA + DL GRAG LQEA+ FI NM P W +LL++C+VHKNVEL
Sbjct: 541 QNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVEL 600
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AE++ +I+P N GAY L+N Y+A +W++AA++R M++KG+KK SW+++KN
Sbjct: 601 AEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKN 660
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + F D HP I E + ++ + +++ G+VPDT+ VLHD+EEE K+ +L +HSE+
Sbjct: 661 KVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEK 720
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FG+ICTP+ TT+RI+KNLRVC DCH+AIKFISK+V REIIVRD +RFHHF++G CS
Sbjct: 721 LAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCS 780
Query: 510 CGDYW 514
C DYW
Sbjct: 781 CRDYW 785
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 196/419 (46%), Gaps = 68/419 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +IVG + G +E A+ + R+M + ++ P FTL++VL A + G
Sbjct: 105 MPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + ++HGL + + + +SL+NMYAK + +F + +K SWN++I+ +Q+
Sbjct: 165 RKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQS 224
Query: 121 GLFD-------------------------------EGLKFFRQMLI-AKIKPRHVSFSSI 148
GL D E L F +ML+ + KP + +S
Sbjct: 225 GLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASA 284
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDD-----NMFIA----------------------- 180
+ ACA+L L LGKQ+H IIR FD N I+
Sbjct: 285 LSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNL 344
Query: 181 -----SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++LLD Y K G+I AR IFD + + D+V+WTA+I+G +G DA+ LF M
Sbjct: 345 DVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMI 404
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
K+G KPN+ +L+ S +D S T+ G A S A+ + ++G +
Sbjct: 405 KEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS-GNASSVSVSNALITMYAKSGSI 463
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+A + +H W +++ A H E A + E++ I P+++ +LS
Sbjct: 464 NDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLS 522
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 153/283 (54%), Gaps = 15/283 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V D+V+W +IVG +NG ++A+ + R M KP+++TL+++L + + + G
Sbjct: 372 LRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHG 431
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
++IH A R G ++V + ++LI MYAK + D+ +F L+ K D I+W S+I Q
Sbjct: 432 RQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQ 491
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+GL +E L F +ML IKP H+++ ++ AC H+ + G+ + +++N + I
Sbjct: 492 HGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYN-LMQNA---HKII 547
Query: 180 ASS-----LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ ++D++ + G ++ A + M + D+++W +++ +H N A E+
Sbjct: 548 PTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAER 607
Query: 234 MEKDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ ++P NS A+ A+ S G + A + SM KD G+
Sbjct: 608 LLL--IEPENSGAYSALANVYSACGQWENAANIRKSM-KDKGV 647
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 63/282 (22%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
L S +S L + D GK IH I+ GL V + ++L+N YAK + D+H
Sbjct: 9 LTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAH 68
Query: 97 RLFCLLPVK-------------------------------DAISWNSIIAGCVQNGLFDE 125
R+F +PVK D++SW ++I G Q G F+
Sbjct: 69 RVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFEN 128
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ FR+M+ + P + ++++ +CA + L +G+++H ++++G + +A+SLL+
Sbjct: 129 AIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLN 188
Query: 186 MYAKCGNIRLARCIFDKMDL-------------------------------HDIVSWTAV 214
MYAK G+ A+ +FD+M L D+VSW A+
Sbjct: 189 MYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAM 248
Query: 215 IMGNALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTACSH 255
I G HG +A+ +F +M D KP+ + L+AC++
Sbjct: 249 ISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACAN 290
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 328/514 (63%), Gaps = 5/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I + L + A+ ++ M + P+ FT SSVL D+
Sbjct: 346 MPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL--- 402
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + ++ GL+++V + S+LI++Y+K + ++ ++F + D++ WNSIIA Q+
Sbjct: 403 KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQH 462
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
DE L ++ M + +S++ AC L+ L LG+Q H +++ FD ++ +
Sbjct: 463 SDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILN 520
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMY KCG++ A+ IF++M D++SW+ +I G A +G + +A++LFE M+ G K
Sbjct: 521 NALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPK 580
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + + VL ACSHAGL+++ W YF SM YGI P EHY + DLLGRA KL + +
Sbjct: 581 PNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVK 640
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M+ P W TLL ACR +NV+LA A++I +DP + GAYV+LSN YA ++R
Sbjct: 641 LIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKR 700
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A +R M+ +G++K P CSWIEV + +AF+ GDKSHP IN L + + R+
Sbjct: 701 WNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAG 760
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL D+E EQ+++ L YHSE+LAIVFGI+ P TIRI KNL++CGDCH
Sbjct: 761 AGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKF 820
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K I+++ QR I++RD R+HHF+DG CSCGDYW
Sbjct: 821 AKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 149/297 (50%), Gaps = 9/297 (3%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
A++++ M + DS T S ++ + V +GK +H + +G + + LIN
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY K +E++ LF +P ++ +SW ++I+ L D ++ M + P +
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FSS++ AC L L KQLH I++ G + ++F+ S+L+D+Y+K G + A +F +M
Sbjct: 389 FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-W 263
D V W ++I A H + +A+ L++ M + G + +VL AC+ L++
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
++ + + D + + A+ D+ + G L++A +FI N A W T+++
Sbjct: 506 AHVHVLKFDQDLILN----NALLDMYCKCGSLEDA-KFIFNRMAKKDVISWSTMIAG 557
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/511 (41%), Positives = 333/511 (65%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ +WNT+I G A + A+ + QM ++ PD+ T + A +DV G+ I
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H +R+G D+ + +SL++MY+ + ++++F ++ +D ++WNS+I G NG+
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMP 218
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L +R+M ++P + S++ AC L L LG+++H +++ G N +++L
Sbjct: 219 NEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNAL 278
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
LD+Y+KCGN R A+ +FD+M+ +VSWT++I+G A++G ++A+ LF ++E+ G+KP+
Sbjct: 279 LDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSE 338
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ FV VL ACSH G++D+ ++YF M ++YGI P EH+ + DLL RAGK+ +AY++I
Sbjct: 339 ITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIR 398
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
NM P +W TLL AC +H ++EL +I ++ + G +V+LSN YA+ RRW D
Sbjct: 399 NMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLD 458
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
++R M KG+KKTP S +E+KN+ Y F+ GD+SHP L ++ + ++ EGY
Sbjct: 459 VQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGY 518
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP T VL D+EEE+K+ L +H+E++AI F ++ TP GT IRI+KNLRVC DCH AIK
Sbjct: 519 VPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKL 578
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ +REIIVRD SRFHHF+DG CSC DYW
Sbjct: 579 ISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 133/253 (52%), Gaps = 10/253 (3%)
Query: 59 KGKEIHGYAIRHGL-----DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
K K+IH ++IRHG+ D N + +L+++ A + + ++F + + +WN++
Sbjct: 50 KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFNQIQAPNIFTWNTM 106
Query: 114 IAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
I G ++ ++ F QM A I P +F + A A L + LG+ +H ++RNG
Sbjct: 107 IRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG 166
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
FD F+ +SL+ MY+ G++ A +F+ M D V+W +VI G AL+G ++A++L+
Sbjct: 167 FDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M +GV+P+ V++L+AC G + M K G+ + A+ DL +
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVK-VGLVQNQHASNALLDLYSKC 285
Query: 293 GKLQEAYEFISNM 305
G ++A + M
Sbjct: 286 GNFRDAQKVFDEM 298
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 93/161 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V+WN+VI G A NG+ EAL + R+MG+ ++PD FT+ S+L + + G
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALG 256
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y ++ GL N ++L+++Y+KC D+ ++F + + +SW S+I G N
Sbjct: 257 ERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVN 316
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
GL +E LK F ++ +KP ++F ++ AC+H L G
Sbjct: 317 GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/510 (42%), Positives = 325/510 (63%), Gaps = 3/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V++N +I G NG E +L++ +++ + S TL S++P+ + + IH
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IH 342
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY ++ ++ + ++L +Y+K +E + +LF P K SWN++I+G QNGL +
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + FR+M ++ P V+ + I+ ACA L L LGK +H + F+ +++++++L+
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I AR +FD M + V+W +I G LHG +A+++F +M G+ P V
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL ACSHAGL+ + FNSM YG PS +HYA + D+LGRAG LQ A +FI
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEA 582
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +VW TLL ACR+HK+ LA V+EK+F +DP+N+G +V+LSN ++A R + A
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQA 642
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A++R + + + K P + IE+ + F +GD+SHP I E L++L +M + GY
Sbjct: 643 ATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQ 702
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T+ LHDVEEE+++ ++ HSERLAI FG+I T GT IRIIKNLRVC DCHT K I
Sbjct: 703 PETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLI 762
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 763 SKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 170/339 (50%), Gaps = 10/339 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D + WNT+I G +N +Y E++ + R + N + + D+ TL +LP A+ ++
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +IH A + G ++ + + I++Y+KC +++ LF D +++N++I G
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L F++++++ + R + S++P HL ++ +HG +++ F + +
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASV 356
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L +Y+K I AR +FD+ + SW A+I G +G DAISLF +M+K
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V +L+AC+ G + + + + + S A+ + + G + EA
Sbjct: 417 SPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
++ E W T++S +H G+ A IF
Sbjct: 476 RLF-DLMTKKNEVTWNTMISGYGLHGQ----GQEALNIF 509
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 140/257 (54%), Gaps = 2/257 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+ +N ++ G + N +L++ + + +LKP+S T + + + + D G+ I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG A+ G D+ + +GS+++ MY K RVED+ ++F +P KD I WN++I+G +N ++
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 124 DEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E ++ FR ++ + + I+PA A L L LG Q+H + G + ++ +
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+ +Y+KCG I++ +F + DIV++ A+I G +G ++SLF+++ G +
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 243 SVAFVAVLTACSHAGLI 259
S V+++ H LI
Sbjct: 322 SSTLVSLVPVSGHLMLI 338
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 137/252 (54%), Gaps = 4/252 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P L SWN +I G +NGL E+A+++ R+M P+ T++ +L A + GK
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H ++++ + ++LI MYAKC + ++ RLF L+ K+ ++WN++I+G +G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFIA 180
E L F +ML + I P V+F ++ AC+H + G ++ +I R GF+ ++
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ ++D+ + G+++ A + M + S W ++ +H + + A ++ E++ + +
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--L 618
Query: 240 KPNSVAFVAVLT 251
P++V + +L+
Sbjct: 619 DPDNVGYHVLLS 630
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q H II +GF +++ + + L + G I AR IF + D+ + ++ G +++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 223 NAHDAISLFEQMEKDG-VKPNSVAFVAVLTACS 254
+ H ++S+F + K +KPNS + ++A S
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/511 (41%), Positives = 319/511 (62%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN VI +N + EA+ + ++ +K + T +L ++ + KGK IH
Sbjct: 272 DVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIH 331
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G D +V + ++L+++Y +C + ++F + KD I+W + QNG
Sbjct: 332 ELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRK 391
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F++M + +P + +++ CAHL L G+Q+H II NGF M + ++L+
Sbjct: 392 EALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALI 451
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY KCG + AR +F+KM DI+ W +++ A HG + + LF QM+ DG K ++V
Sbjct: 452 NMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAV 511
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+FV+VL+A SH+G + + YF +M +D+ I P+ E Y V DLLGRAG++QEA + +
Sbjct: 512 SFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLK 571
Query: 305 MHAG-PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+ P +W+TLL ACR H + A AE++ DP++ GAYV+LSN YAAA W
Sbjct: 572 LSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDG 631
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R MR++G+KK P S IE+ N+ + F+ GD+SHP H I L L M GY
Sbjct: 632 VNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGY 691
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
+PDTK +LHDVE+E+K+++L+YHSERLAI FG++ TP GT +R+IKNLRVC DCHTA K+
Sbjct: 692 IPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKY 751
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ REI+VRD RFH+F+DG+CSC DYW
Sbjct: 752 ISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
KPD+ ++L + +V G+ +H + G + N + LI MYA+C V ++
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
++F +L KD +W +I Q G +D L F QM + P V++ +I+ ACA
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
+L G ++HG I++ GF+ ++F+ ++L++MY KCG++R A F +++ D+VSWTA+I
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
H A L+ +M+ DGV PN + V A + + + S+ +
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG-KFIYSLVSSRVME 239
Query: 277 PSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ ++ G AG L +A +M
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDM 268
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 161/320 (50%), Gaps = 2/320 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW +I ++ + A + R+M + P+ TL +V + D + +GK I+
Sbjct: 171 DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIY 230
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++++V + +S +NM+ + D+ RLF + +D ++WN +I VQN F
Sbjct: 231 SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG 290
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F ++ IK ++F ++ LT+L GK +H + G+D ++ +A++L+
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y +C A IF M D+++WT + + A +G +A+ LF++M+ +G +P S
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
VAVL C+H + K + + ++ G A+ ++ G+ GK+ EA
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIEN-GFRMEMVVETALINMYGKCGKMAEARSVFEK 469
Query: 305 MHAGPTENVWLTLLSACRVH 324
M A VW ++L A H
Sbjct: 470 M-AKRDILVWNSMLGAYAQH 488
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ +W +I + G Y+ AL + QM ++ P T ++L A + G EIH
Sbjct: 70 DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 129
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G + +V +G++LINMY KC V + F L +D +SW ++IA CVQ+ F
Sbjct: 130 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 189
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+R+M + + P ++ ++ A L GK ++ + + ++ + +S +
Sbjct: 190 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAM 249
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+M+ G + AR +F+ M D+V+W VI + N +A+ LF ++++DG+K N +
Sbjct: 250 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDI 309
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV +L + + K + + K+ G A+ L GR +A++ +
Sbjct: 310 TFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVD 368
Query: 305 M 305
M
Sbjct: 369 M 369
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 10/275 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+++W + V A+NG +EAL + ++M +P S TL +VL A + KG
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 428
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + I +G + + ++LINMY KC ++ ++ +F + +D + WNS++ Q+
Sbjct: 429 RQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQH 488
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +DE L+ F QM + K VSF S++ A +H ++ G Q ++++ +
Sbjct: 489 GYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL 548
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQ-MEK 236
++D+ + G I+ A I K+ L D + W ++ H A + EQ +E+
Sbjct: 549 YGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLER 608
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
D +S A+V + + AG W N M K
Sbjct: 609 D--PSHSGAYVVLSNVYAAAG----DWDGVNRMRK 637
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/529 (41%), Positives = 335/529 (63%), Gaps = 23/529 (4%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G A++ E+AL + +M L ++ T+SS++P + + + + IHGY
Sbjct: 286 WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 345
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
I+ GL+ N + ++LI+MY++ ++ S R+F + +D +SWN+II V G + L
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 405
Query: 128 KFFRQMLIAK----------------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+M + KP ++ +++P CA L+ L GK++H IRN
Sbjct: 406 LLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN 465
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ + S+L+DMYAKCG + LAR +FD+M + ++++W +IM +HG +++ LF
Sbjct: 466 LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELF 525
Query: 232 EQMEKDG-----VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA 286
E M +G VKP V F+A+ +CSH+G++D+ S F+ M ++GI P+ +HYA +
Sbjct: 526 EDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIV 585
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM 345
DL+GRAGK++EAY ++ M +G + W +LL ACR++ N+E+ AE + + P+
Sbjct: 586 DLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVA 645
Query: 346 GAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYH 405
YV+LSN Y++A W A +LR M+ G+KK P CSWIE ++ + F+AGD SHP
Sbjct: 646 SHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSE 705
Query: 406 RINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTI 465
++++ L+ L ER+++EGYVPDT VLHD++EE+K+ +L HSE+LAI FGI+ TP GTTI
Sbjct: 706 KLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTI 765
Query: 466 RIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R+ KNLRVC DCHTA KFISKI REII+RD RFHHF+DG CSCGDYW
Sbjct: 766 RVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 7/307 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD---VIKGK 61
D VSWN++I L R +E A+ R M +P SFTL S+ ++ + GK
Sbjct: 77 DQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGK 136
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IHG R G ++L+ MYAK R++D+ L L +D ++WNS+I+ QN
Sbjct: 137 QIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNE 195
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFIA 180
F E L F R M++ +KP V+F+S++PAC+HL L GK++H +R + +N F+
Sbjct: 196 RFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVG 255
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGV 239
S+L+DMY CG + R +FD + I W A+I G A + A+ LF +ME G+
Sbjct: 256 SALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGL 315
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
N+ +++ A I + + K G+ + A+ D+ R G ++ +
Sbjct: 316 YSNATTMSSIVPAYVRCEGISRKEGIHGYVIK-RGLETNRYLQNALIDMYSRMGDIKTSK 374
Query: 300 EFISNMH 306
+M
Sbjct: 375 RIFDSME 381
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 126/229 (55%), Gaps = 6/229 (2%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDA--NVCIGSSLINMYAKCARVE 93
PD+F +VL A ++ GK+IH + + G + +V I ++L+NMY KC +
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
D++++F + +D +SWNSII+ + ++ +K FR ML+ +P + S+ AC+
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 154 HLTT---LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
+L L LGKQ+HGC R G F ++L+ MYAK G + A+ + + D+V+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
W ++I + + +A+ M +GVKP+ V F +VL ACSH L+
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLL 232
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 27/287 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----------GNVN------LKPDSFTL 44
M D+VSWNT+I G +AL ++ +M G+ N KP+S TL
Sbjct: 380 MEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITL 439
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV 104
+VLP A + KGKEIH YAIR+ L + V +GS+L++MYAKC + + R+F +P+
Sbjct: 440 MTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI 499
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-----AKIKPRHVSFSSIMPACAHLTTLH 159
++ I+WN II +G E L+ F M+ ++KP V+F ++ +C+H +
Sbjct: 500 RNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVD 559
Query: 160 LGKQL-HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIM 216
G L H +G + + ++D+ + G + A + + M + +W++++
Sbjct: 560 EGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLG 619
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC-SHAGLIDKA 262
++ N E + + ++P+ + +L+ S AGL DKA
Sbjct: 620 ACRIYHNIEIGEIAAENLLQ--LQPDVASHYVLLSNIYSSAGLWDKA 664
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD--DNMFIASSLLDMYAKC 190
M+ + P + +F +++ A A + L+LGKQ+H + + G+ ++ I ++L++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G + A +FD++ D VSW ++I AI F M +G +P+S V++
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 251 TACSHAGLIDKAW 263
ACS+ D W
Sbjct: 121 LACSNLRKRDGLW 133
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 331/514 (64%), Gaps = 6/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I + N L ++AL + M ++P+ FT SSVL ++
Sbjct: 116 MPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL--- 171
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H I+ GL+++V + S+LI++Y+K + ++++ +F +P +D + WNSII G QN
Sbjct: 172 RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN 231
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L F++M A + +S++ AC L L LG+Q+H +++ FD ++ +
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILN 289
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG++ A F +M D++SW+ ++ G A +G + A+ LFE M++ G +
Sbjct: 290 NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + + VL ACSHAGL++K W YF SM K +G+ P EHY + DLLGRAG+L EA +
Sbjct: 350 PNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVK 409
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P W TLL ACRVH+NV+LA A+KI ++P + G Y++LSN YA +R
Sbjct: 410 LIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQR 469
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A +R M N+G++KTP CSWIEV + + F+ GD SHP I + L +L+ER+
Sbjct: 470 WEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMG 529
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL D+E EQK++ L YHSE+LAI+FG++ T+RI KNLR+CGDCH
Sbjct: 530 VGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVF 589
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S++ R I++RD R+HHF+DG CSCGDYW
Sbjct: 590 AKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 127/221 (57%), Gaps = 4/221 (1%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D+ T S ++ + V +GK +H + G + + + ++L+NMY K +E++ LF
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+P ++ +SW ++I+ N L D+ LK M ++P ++SS++ AC L L
Sbjct: 114 DEMPERNVVSWTTMISA-YSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL- 171
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+QLH II+ G + ++F+ S+L+D+Y+K ++ A +FD+M D+V W ++I G A
Sbjct: 172 --RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFA 229
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+ + ++A++LF++M++ G + +VL AC+ L++
Sbjct: 230 QNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/551 (40%), Positives = 338/551 (61%), Gaps = 37/551 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQ-----MGNVN-LKPDSFTLSSVLPIFADY 54
MP+ D+VSWN++I G NG + EAL I Q M VN KPD T++S+L
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHL 235
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ GK +H Y I G + + + LINMYAKC + S +F + KD++SWNS+I
Sbjct: 236 GDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI 295
Query: 115 AGCVQNGLFDEGLKFFRQM--------------------------LIAKIK-----PRHV 143
+QNG + LK F M +I++++ P
Sbjct: 296 NVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 355
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ SI+P C+ L GK++HGCI + G + ++ + + L++MY+KCG++R + +F M
Sbjct: 356 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 415
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+V+WTA+I ++G A+ F +ME G+ P+ VAFVA++ ACSH+GL+++
Sbjct: 416 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 475
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
+YF+ M KDY I P EHYA V DLL R+ L +A +FI +M P ++W LLSACR+
Sbjct: 476 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 535
Query: 324 HKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACS 383
+ E+A +V+E+I ++P++ G YV++SN YAA +W S+R ++ +G+KK P CS
Sbjct: 536 SGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 595
Query: 384 WIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLL 443
W+E++NK Y F G K + +N+ L L M +EGY+ + + VLHD++E++K+++L
Sbjct: 596 WMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDIL 655
Query: 444 YYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF 503
HSERLAI FG++ T GT ++++KNLRVC DCHT K+ISKIVQRE++VRD +RFH F
Sbjct: 656 CGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVF 715
Query: 504 EDGKCSCGDYW 514
+DG CSCGDYW
Sbjct: 716 KDGACSCGDYW 726
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 178/337 (52%), Gaps = 17/337 (5%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +++ WN++I L NGL+ EAL++ + + L+PD++T SV+ A +D K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
IH + G +++ IG++LI+MY + ++ + ++F +P++D +SWNS+I+G NG
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 122 LFDEGLKFFRQM------LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
++E L+ + Q ++ + KP ++ +SI+ AC HL L GK +H +I +G++
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++ L++MYAKCGN+ ++ +F M D VSW ++I +G D++ +FE M+
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA---VADLLG-- 290
+ + + ++ +C H+ + + M + G+ P + V LL
Sbjct: 316 ARDI----ITWNTIIASCVHSEDCNLGLRMISRMRTE-GVTPDMATMLSILPVCSLLAAK 370
Query: 291 RAGKLQEAYEFISNMHAG-PTENVWLTLLSACRVHKN 326
R GK F + + P NV + + S C +N
Sbjct: 371 RQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 407
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 16/273 (5%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL- 102
SS+ A + ++H I GL +V + LI YA S +F L
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P + WNSII NGLF E L + + +++P +F S++ ACA L + K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
+H ++ GF +++I ++L+DMY + ++ AR +F++M L D+VSW ++I G +G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 223 NAHDAISLFEQMEK------DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
++A+ ++ Q K + KP+ + ++L AC H G ++ F DY I
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLE-----FGKYVHDYMIT 250
Query: 277 PSFEHYAAVADLL----GRAGKLQEAYEFISNM 305
+E +++L + G L + E S M
Sbjct: 251 SGYECDTTASNILINMYAKCGNLLASQEVFSGM 283
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R FSSI A A T +LH II G ++ ++ L+ YA + + +F
Sbjct: 12 RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 71
Query: 201 D-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+++ W ++I +G +A+SL+ + ++ ++P++ F +V+ AC AGL+
Sbjct: 72 RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLL 129
Query: 260 D-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLT 316
D + + D G A+ D+ R L +A + M P +V W +
Sbjct: 130 DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM---PLRDVVSWNS 186
Query: 317 LLSA 320
L+S
Sbjct: 187 LISG 190
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 333/542 (61%), Gaps = 35/542 (6%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+WN +I G G ++EAL + R+M + ++ D T ++++ A+ GK++H Y
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYI 315
Query: 68 IRHGLDAN----VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV----- 118
+++ L+ N + + ++LI +Y K +V+++ ++F +PV++ I+WN+I++G V
Sbjct: 316 LKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375
Query: 119 --------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
QNG DEGLK F+QM + +P +F+ + AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ L L G+QLH ++ G++ ++ + ++++ MYAKCG + A +F M D+VSW
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++I HG+ AI LF+QM K+GV P+ + F+ VLTACSHAGL++K YFNSM +
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YGI P +HYA + DL RAG A I +M + P VW LL+ CR+H N++L +
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
AE++F + P N G YV+LSN YA RW + A +R MR++ ++K PACSWIEV+NK +
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVH 675
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F+ D HP + L++L M++ GY+PDTK VLHD+E EQK++ L HSE+LA+
Sbjct: 676 VFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAV 735
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
FGI+ P G T+R+ KN+R+CGDCH A KF+SK+ +REIIVRD RFHHF++G CSC D
Sbjct: 736 GFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRD 795
Query: 513 YW 514
YW
Sbjct: 796 YW 797
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV +L++ +I GLA+NG +E L + +QM +P F + L + + G
Sbjct: 385 MPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENG 444
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + G ++++ +G+++I+MYAKC VE + +F +P D +SWNS+IA Q+
Sbjct: 445 RQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQH 504
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + ++ F QML + P ++F +++ AC+H + G+ ++ + G
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDH 564
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++D++ + G AR + D M W A++ G +HGN I EQ+ K
Sbjct: 565 YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFK 622
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 182/431 (42%), Gaps = 115/431 (26%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIKGK 61
+ D V +N +I G A NG AL + R M + +PD FT +SVL +V + +
Sbjct: 109 MRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG 168
Query: 62 EIHGYAIRHGLDANVCIGSSLIN----MYAK--------CARVEDSHRLFCLLPVKDAIS 109
++H ++ G+ C+ SS++N +Y K C+ + + +LF +P +D ++
Sbjct: 169 QMHCAVVKTGMG---CVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELT 225
Query: 110 WNSIIAGCVQN-------------------------------GLFDEGLKFFRQMLIAKI 138
W ++I G V+N G F E L R+M I
Sbjct: 226 WTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGI 285
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN----MFIASSLLDMYAKCGNIR 194
+ +++++I+ ACA++ + +GKQ+H I++N + N + ++++L+ +Y K +
Sbjct: 286 QFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVD 345
Query: 195 LARCIFDKMDLHDIVSWTAV-------------------------------IMGNALHGN 223
AR IF M + +I++W A+ I G A +G
Sbjct: 346 EARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGF 405
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACS-----------HAGLI----DKAWSYFNS 268
+ + LF+QM DG +P AF LTACS HA L+ + + S N+
Sbjct: 406 GDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNA 465
Query: 269 MTKDYGIAPSFEHYAAV------ADL---------LGRAGKLQEAYEFISNM---HAGPT 310
M Y E +V DL LG+ G +A E M P
Sbjct: 466 MISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPD 525
Query: 311 ENVWLTLLSAC 321
+LT+L+AC
Sbjct: 526 RITFLTVLTAC 536
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 151/356 (42%), Gaps = 43/356 (12%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
KP L+ +L ++ +++ +++ + + ++LI Y +E
Sbjct: 44 FKPRGHFLNRLLEMYCKSSNLVYARQL----FEEIPNPDAIARTTLITAYCALGNLELGR 99
Query: 97 RLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+F P+ +D++ +N++I G NG L+ FR M +P +F+S++ A
Sbjct: 100 EIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA--- 156
Query: 155 LTTLHLGK-----QLHGCIIRNGFD-DNMFIASSLLDMYAK--------CGNIRLARCIF 200
L +G Q+H +++ G + + ++LL +Y K C + AR +F
Sbjct: 157 -LVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLF 215
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D+M D ++WT +I G + + + A +FE M V+ A+ A+++ H G
Sbjct: 216 DEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENLGAAWNAMISGYVHCGCFQ 271
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ---EAYEFISNMHAGPTENVWLTL 317
+A + M + GI Y + G Q + + +I P + L++
Sbjct: 272 EALTLCRKM-RFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSV 330
Query: 318 LSA-----CRVHKNVELAGKVAEKIFMIDP-NNMGAYVILSNTYAAARRWKDAASL 367
+A C+ +K E A KIF P N+ + + + Y A R ++A S
Sbjct: 331 SNALITLYCKNNKVDE-----ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSF 381
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-------------------------- 190
+ L + +H +I +GF + LL+MY K
Sbjct: 28 SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLIT 87
Query: 191 -----GNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
GN+ L R IF+ L+ D V + A+I G A +G+ H A+ LF M +D +P+
Sbjct: 88 AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147
Query: 244 VAFVAVLTA 252
F +VL+A
Sbjct: 148 FTFTSVLSA 156
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/511 (42%), Positives = 328/511 (64%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+S+N +I G N E A+ + R++ + +S TL ++P++ + + + I
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQ 338
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ G+ + ++L +Y + V+ + +LF P K SWN++I+G QNGL D
Sbjct: 339 NLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTD 398
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F++M+ ++ P V+ +SI+ ACA L L +GK +HG I + N++++++L+
Sbjct: 399 RAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALV 457
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I AR +FD M ++V+W A+I G LHG+ +A+ LF +M + G+ P V
Sbjct: 458 DMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGV 517
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+++L ACSH+GL+ + F+SM +YG P EHYA + D+LGRAG+L A EFI
Sbjct: 518 TFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 577
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW LL AC +HKN E+A ++++F +DP N+G YV+LSN Y+ R + A
Sbjct: 578 MPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKA 637
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R ++ + + KTP C+ IE+ ++ Y F +GD+SHP I E L++L +M + GY
Sbjct: 638 ASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQ 697
Query: 425 PDT-KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
+T LHDVE+E+K+ ++ HSE+LAI FG+I T GT IRIIKNLRVC DCHTA KF
Sbjct: 698 AETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKF 757
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKI +R I+VRD +RFHHF++G CSCGDYW
Sbjct: 758 ISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 167/340 (49%), Gaps = 11/340 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V WNT+I G +RN +E+++ + M +V L DS TL++VL A+ + G
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG 233
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
I A + GL ++V + + LI++Y+KC + LF + D IS+N++I+G N
Sbjct: 234 MGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFN 293
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + FR++L + + + ++P L L + + ++ G ++
Sbjct: 294 HETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS 353
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L +Y + ++ AR +FD+ + SW A+I G +G AISLF++M +
Sbjct: 354 TALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LS 412
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V ++L+AC+ G + + + + K + + A+ D+ + G + EA +
Sbjct: 413 PNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
M +NV W +++ +H + GK A K+F
Sbjct: 472 LFDLM---VDKNVVTWNAMITGYGLHGH----GKEALKLF 504
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 136/247 (55%), Gaps = 1/247 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
DL +N +I G + NGL + ++ + + NL+PD+FT + + + D G +
Sbjct: 76 DLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLL 135
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++I G+ +N+ +GS+++++Y K R E + ++F ++P +D + WN++I+G +N F
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYF 195
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ ++ F ML + + ++++ A A L LG + + G ++++ + L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ +Y+KCG R +FD++D D++S+ A+I G + A++LF ++ G + NS
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 244 VAFVAVL 250
V ++
Sbjct: 316 STLVGLI 322
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I I HG+ ++ + L + + V +LF + D +N +I G NG
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91
Query: 122 LFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L + + + ++P + +++ + A + L +G LH I +G N+F+
Sbjct: 92 LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+++D+Y K LAR +FD M D V W +I G + + D+I +F M G+
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 241 PNSVAFVAVLTACS 254
+S VLTA +
Sbjct: 212 FDSTTLATVLTAVA 225
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/527 (43%), Positives = 336/527 (63%), Gaps = 24/527 (4%)
Query: 5 DLVSWNTVIV-----GLARNGLYEEALNIVRQM---GNVNLKPDS-----FTLSSVLPIF 51
++ S N VI+ G RN L +L + R++ G+ ++ F+ S+ +P
Sbjct: 150 EIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIP-- 207
Query: 52 ADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE--DSHRLFCLLPVKDAIS 109
D +H ++ GLD + + +++++ YAK R + + ++F + KD +S
Sbjct: 208 ----DCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVS 262
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGC 167
WNS+IA QNG+ + L +R+ML IK V+ S+I+ ACAH T+ GK +H
Sbjct: 263 WNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQ 322
Query: 168 IIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
++R G ++N+++ +S++DMY+KCG + +AR F K+ +I+SW+A+I G +HG+ +A
Sbjct: 323 VVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEA 382
Query: 228 ISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
+ +F +M + G PN + F++VL ACSHAGL+DK ++N+M K +GI P EHY + D
Sbjct: 383 LDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVD 442
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGA 347
LLGRAG L EAY I M P +W LLSACR+HKNVELA A+++F +D N G
Sbjct: 443 LLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGY 502
Query: 348 YVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRI 407
YV+LSN YA A WKD +RV ++ +G++K P S +E+K + + F GDKSHP + I
Sbjct: 503 YVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEI 562
Query: 408 NEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRI 467
L +LLE+M++ GYVP+T VLHD++EE+K + L+ HSE+LAI F ++ + G+ I +
Sbjct: 563 YSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHV 622
Query: 468 IKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKNLRVC DCHTAIK I+KI QREIIVRD RFHHF+DG CSCGDYW
Sbjct: 623 IKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 60 GKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+++H AIR GL ++ S+L++MY C+R D+ + F +P + + ++ +G V
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM---PACAHLTTLHLGKQLHGCIIRNGFDD 175
+N L L FR+ LIA V ++ + A A + + LH +++ G D
Sbjct: 168 RNNLVYPSLALFRK-LIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226
Query: 176 NMFIASSLLDMYAKCG--NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ + +++LD YAK G ++ AR +FD M+ D+VSW ++I A +G + DA+ L+ +
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRK 285
Query: 234 M--EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M +K N+V A+L AC+HAG I N + + G+ + +V D+ +
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR-MGLEENVYVGTSVVDMYSK 344
Query: 292 AGKLQEA 298
G+++ A
Sbjct: 345 CGRVEMA 351
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 329/549 (59%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+WN++ G ++ LN+ R+M +KPD T+ S+L +D D+ G
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI------- 113
K IHG+A+RHG+ +V + ++L+++YAKC V ++ +F L+P ++ SWN I
Sbjct: 464 KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTN 523
Query: 114 ----------------------------IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
I GCV+N +E ++ FR+M KP +
Sbjct: 524 KEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTI 583
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SI+ AC+ L +GK++H + R+ D ++ ++L+DMYAKCG + L+R +FD M +
Sbjct: 584 YSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPI 643
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+ SW +I N +HGN +A+SLFE+M VKP+S F VL+ACSH+ L+++
Sbjct: 644 KDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQI 703
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
FNSM++D+ + P EHY V D+ RAG L+EAY FI M PT W L+ CRV+K
Sbjct: 704 FNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYK 763
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
NVELA A+K+F IDPN YV L N A+ W +A+ +R M+ +G+ KTP CSW
Sbjct: 764 NVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWF 823
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
V N+ + FVAGDKS+ +I L EL +++ GY PDT VLHD+++E+K L
Sbjct: 824 HVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCN 883
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LA+ FGI+ +TIR+ KNLR+CGDCH AIK++S +V I+VRD+ RFHHF++
Sbjct: 884 HSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKN 943
Query: 506 GKCSCGDYW 514
G CSC D+W
Sbjct: 944 GNCSCKDFW 952
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 198/391 (50%), Gaps = 43/391 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++++WN++ G ++ LN+ R+MG +KPD +SS+LP + D+ G
Sbjct: 303 MPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG+A++HG+ +V + ++L+N+YA C V ++ +F L+P ++ ++WNS+ + V
Sbjct: 363 KTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNC 422
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +GL FR+M++ +KP V+ SI+ AC+ L L GK +HG +R+G +++F+
Sbjct: 423 GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVC 482
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL +YAKC +R A+ +FD + ++ SW ++ + + +F QM +D VK
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS---------------------- 278
+ + + V+ C I++A F M + G P
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKPDETTIYSILRACSLSECLRMGKE 601
Query: 279 -----FEHYA--------AVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRV 323
F H+ A+ D+ + G L + M P ++V W T++ A +
Sbjct: 602 IHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMM---PIKDVFSWNTMIFANGM 658
Query: 324 HKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
H N + A + EK+ M+ P++ +LS
Sbjct: 659 HGNGKEALSLFEKMLLSMVKPDSATFTCVLS 689
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 155/251 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN++ G ++ LN+ R+MG +K + T+SS+LP +D D+ GKEIH
Sbjct: 105 DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIH 164
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ +RHG+ +V + S+ +N YAKC V ++ +F L+P +D ++WNS+ + V G
Sbjct: 165 GFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQ 224
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+GL FR+M++ +KP V+ S I+ AC+ L L GK +HG +++G +N+F++++L+
Sbjct: 225 KGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALV 284
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
++Y C +R A+ +FD M ++++W ++ G +++F +M +GVKP+ +
Sbjct: 285 NLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPM 344
Query: 245 AFVAVLTACSH 255
A ++L ACS
Sbjct: 345 AMSSILPACSQ 355
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 156/254 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+WN++ G ++ LN+ R+M +KPD T+S +L +D D+ G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG+A++HG+ NV + ++L+N+Y C V ++ +F L+P ++ I+WNS+ + V
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +GL FR+M + +KP ++ SSI+PAC+ L L GK +HG +++G +++F+
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVC 381
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+++YA C +R A+ +FD M ++V+W ++ G +++F +M +GVK
Sbjct: 382 TALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVK 441
Query: 241 PNSVAFVAVLTACS 254
P+ V +++L ACS
Sbjct: 442 PDLVTMLSILHACS 455
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 136/236 (57%)
Query: 19 NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCI 78
+GL EA+ I +KPD +V A D +K K+ H A R G+ ++V I
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 79 GSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 138
G++ I+ Y KC VE + R+F L +D ++WNS+ A V G +GL FR+M + K+
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
K ++ SSI+P C+ L L GK++HG ++R+G +++F++S+ ++ YAKC +R A+
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+FD M D+V+W ++ G +++F +M DGVKP+ V +L+ACS
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%)
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ +GL +E +K + IKP F ++ ACA KQ H R G ++
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++ + Y KC + AR +FD + D+V+W ++ G +++F +M +
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 238 GVKPNSVAFVAVLTACS 254
VK N + ++L CS
Sbjct: 136 KVKANPLTVSSILPGCS 152
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/511 (42%), Positives = 328/511 (64%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+S+N +I G N E A+ + R++ + +S TL ++P++ + + + I
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQ 338
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ G+ + ++L +Y + V+ + +LF P K SWN++I+G QNGL D
Sbjct: 339 NLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTD 398
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F++M+ ++ P V+ +SI+ ACA L L +GK +HG I + N++++++L+
Sbjct: 399 RAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALV 457
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I AR +FD M ++V+W A+I G LHG+ +A+ LF +M + G+ P V
Sbjct: 458 DMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGV 517
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+++L ACSH+GL+ + F+SM +YG P EHYA + D+LGRAG+L A EFI
Sbjct: 518 TFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 577
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW LL AC +HKN E+A ++++F +DP N+G YV+LSN Y+ R + A
Sbjct: 578 MPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKA 637
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R ++ + + KTP C+ IE+ ++ Y F +GD+SHP I E L++L +M + GY
Sbjct: 638 ASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQ 697
Query: 425 PDT-KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
+T LHDVE+E+K+ ++ HSE+LAI FG+I T GT IRIIKNLRVC DCHTA KF
Sbjct: 698 AETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKF 757
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKI +R I+VRD +RFHHF++G CSCGDYW
Sbjct: 758 ISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 167/340 (49%), Gaps = 11/340 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V WNT+I G +RN +E+++ + M +V L DS TL++VL A+ + G
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG 233
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
I A + GL ++V + + LI++Y+KC + LF + D IS+N++I+G N
Sbjct: 234 MGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFN 293
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + FR++L + + + ++P L L + + ++ G ++
Sbjct: 294 HETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS 353
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L +Y + ++ AR +FD+ + SW A+I G +G AISLF++M +
Sbjct: 354 TALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LS 412
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V ++L+AC+ G + + + + K + + A+ D+ + G + EA +
Sbjct: 413 PNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
M +NV W +++ +H + GK A K+F
Sbjct: 472 LFDLM---VDKNVVTWNAMITGYGLHGH----GKEALKLF 504
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 136/247 (55%), Gaps = 1/247 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
DL +N +I G + NGL + ++ + + NL+PD+FT + + + D G +
Sbjct: 76 DLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLL 135
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++I G+ +N+ +GS+++++Y K R E + ++F ++P +D + WN++I+G +N F
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYF 195
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ ++ F ML + + ++++ A A L LG + + G ++++ + L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ +Y+KCG R +FD++D D++S+ A+I G + A++LF ++ G + NS
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 244 VAFVAVL 250
V ++
Sbjct: 316 STLVGLI 322
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I I HG+ ++ + L + + V +LF + D +N +I G NG
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91
Query: 122 LFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L + + + ++P + +++ + A + L +G LH I +G N+F+
Sbjct: 92 LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+++D+Y K LAR +FD M D V W +I G + + D+I +F M G+
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 241 PNSVAFVAVLTACS 254
+S VLTA +
Sbjct: 212 FDSTTLATVLTAVA 225
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/543 (40%), Positives = 333/543 (61%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
++WN +I G +GL+E+AL + R+M + ++ D T +SV+ AD + GK++H Y
Sbjct: 255 IAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAY 314
Query: 67 AIRHGLDAN----VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV---- 118
+++ L+ + + +G++LI +Y K +V+ + ++F +PVKD I+WN++++G V
Sbjct: 315 ILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGR 374
Query: 119 ---------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
QNG ++ LK F QM + +P +F+ + A
Sbjct: 375 MEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITA 434
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C+ L L G+QLH I+ G D + + ++++ MYA+CG + AR +F M D VSW
Sbjct: 435 CSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSW 494
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
++I HG+ AI L+EQM K+G+ P+ F+ VL+ACSHAGL+++ YFNSM +
Sbjct: 495 NSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
+YGIAP +HYA + DL RAGK +A I +M +W LL+ CR H N++L
Sbjct: 555 NYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGI 614
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
+ AEK+F + P + G YV+LSN YA+ RW D A R MR++G+KK PACSW EV+NK
Sbjct: 615 EAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKV 674
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ D HP I L++L M++ GY+PDTK VLHD+E E K+ L HSE+LA
Sbjct: 675 HVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLA 734
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FG++ P G T+R+ KNLR+CGDCH AIKF+SK+V REI+VRD RFHHF++G+CSC
Sbjct: 735 VAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCR 794
Query: 512 DYW 514
+YW
Sbjct: 795 NYW 797
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 181/430 (42%), Gaps = 109/430 (25%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA-DYVDVIK 59
+ + D V +N +I G + A+ + R M N +PD FT +SVL + D +
Sbjct: 107 LDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQ 166
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCAR---------VEDSHRLFCLLPVKD---- 106
++HG ++ G++ + ++L+++Y KCA + + +LF +P ++
Sbjct: 167 CGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIW 226
Query: 107 ---------------------------AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
I+WN++I+G + +GLF++ L FR+M + ++
Sbjct: 227 TTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQ 286
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN----MFIASSLLDMYAKCGNIRL 195
+++S++ ACA LGKQ+H I++N + + + + ++L+ +Y K G +
Sbjct: 287 VDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDG 346
Query: 196 ARCIFDKMDLHDIV-------------------------------SWTAVIMGNALHGNA 224
AR IF +M + DI+ +WT +I G A +G
Sbjct: 347 ARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFG 406
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACS-----------HAGLI----DKAWSYFNSM 269
A+ LF QM+ DG +PN AF +TACS HA ++ D S N+M
Sbjct: 407 EQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAM 466
Query: 270 TKDYG-----------------IAP-SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
Y + P S+ A G K E YE + P
Sbjct: 467 ITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDR 526
Query: 312 NVWLTLLSAC 321
+LT+LSAC
Sbjct: 527 RTFLTVLSAC 536
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 121/238 (50%), Gaps = 2/238 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L++W +I GLA+NG E+AL + QM +P+ + + + + + G
Sbjct: 385 MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG 444
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + G D+ + +G+++I MYA+C VE + +F +P D +SWNS+IA Q+
Sbjct: 445 RQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQH 504
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + ++ + QML I P +F +++ AC+H + G + ++ N G
Sbjct: 505 GHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDH 564
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++D++ + G A+ + D M W A++ G HGN I E++ K
Sbjct: 565 YARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFK 622
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 59/316 (18%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+V ++LI Y+ ++ + +F P+ +D + +N++I G ++ FR
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 133 MLIAKIKPRHVSFSSIMPACA------------HLTTLHLGKQLHGCII----------- 169
M A +P +F+S++ A H T + G ++ ++
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCA 197
Query: 170 --------------RNGFDD----NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
R FD+ N FI ++L+ Y + G++ AR I D M ++W
Sbjct: 198 SSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAW 257
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG--LIDK---AWSYF 266
A+I G HG DA++LF +M GV+ + + +V++AC+ G L+ K A+
Sbjct: 258 NAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILK 317
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLS----A 320
N + D S + + L + GK+ A + M P +++ W TLLS A
Sbjct: 318 NELNPDRDFLLSVGN--TLITLYWKYGKVDGARKIFYEM---PVKDIITWNTLLSGYVNA 372
Query: 321 CRVHKNVELAGKVAEK 336
R+ + ++ EK
Sbjct: 373 GRMEEAKSFFAQMPEK 388
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 34/144 (23%)
Query: 145 FSSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC------------- 190
F+ + C L++ L + +HG +I +GF I + L+D+Y K
Sbjct: 15 FAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEI 74
Query: 191 ------------------GNIRLARCIFDK--MDLHDIVSWTAVIMGNALHGNAHDAISL 230
GN+++AR IF++ +D+ D V + A+I G + + H AI L
Sbjct: 75 PQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIEL 134
Query: 231 FEQMEKDGVKPNSVAFVAVLTACS 254
F M +P+ F +VL+A +
Sbjct: 135 FRAMRWANFQPDDFTFASVLSAST 158
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 336/543 (61%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I G ++G+ +A + R+M + + D FT +SVL A+ + GK +HG
Sbjct: 266 VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQ 325
Query: 67 AIRHGL----DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI--------- 113
IR +A + + ++L+ +Y+K ++ + R+F + +KD +SWN+I
Sbjct: 326 IIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGC 385
Query: 114 ----------------------IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
++G V GL ++ LK F QM +KP +++ + A
Sbjct: 386 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAA 445
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C L L G+QLH +++ GF+ + ++LL MYAKCG + AR +F M D VSW
Sbjct: 446 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 505
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I HG+ +A+ LF+QM +G+ P+ ++F+ +LTAC+HAGL+D+ + YF SM +
Sbjct: 506 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR 565
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
D+GI+P +HYA + DLLGR+G++ EA + I M PT ++W +LS CR + ++E
Sbjct: 566 DFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGA 625
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+++F + P + G Y++LSNTY+AA RW DAA +R MR++G+KK P CSWIEV +K
Sbjct: 626 YAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKI 685
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ GD HP + + L+ + RM + GYVPDTK VLHD+E +K+ +L+ HSE+LA
Sbjct: 686 HVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLA 745
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FG++ P G T+ ++KNLR+CGDCHTA+ F+SK V REI+VRD RFHHF+DG+CSCG
Sbjct: 746 VGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCG 805
Query: 512 DYW 514
+YW
Sbjct: 806 NYW 808
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW ++ G GL E+AL + QM ++KP +T + + + + G
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + ++ G +A+ G++L+ MYAKC V D+ +F ++P D++SWN++I+ Q+
Sbjct: 456 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 515
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F QM+ I P +SF +I+ AC H + G + R+ G
Sbjct: 516 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 575
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN----AHDAISLFEQM 234
+ L+D+ + G I AR + M S W A++ G +G+ A+ A LF +
Sbjct: 576 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 635
Query: 235 EK-DGV 239
+ DG
Sbjct: 636 PQHDGT 641
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 177/386 (45%), Gaps = 59/386 (15%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG--K 61
D V N ++ AR L A+++ + G+ +L+PD ++ ++++ ++
Sbjct: 126 DTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCT 185
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISW-------- 110
++H ++ G A + + ++LI +Y KC E D+ ++ +P KD ++W
Sbjct: 186 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 245
Query: 111 -----------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
N++I+G VQ+G+ + + FR+M+ K+ +F+S
Sbjct: 246 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 305
Query: 148 IMPACAHLTTLHLGKQLHGCIIR--NGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ ACA+ GK +HG IIR F + + + ++L+ +Y+K G I +A+ IFD M
Sbjct: 306 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 365
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+L D+VSW ++ G G A+ +F+ M N ++++ +++ H GL + A
Sbjct: 366 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDAL 421
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM------HAGPTENVWLTL 317
FN M + + P YA G G L+ + +++ + N LT+
Sbjct: 422 KLFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM 480
Query: 318 LSACRVHKNVELAGKVAEKIFMIDPN 343
+ C + L +F++ PN
Sbjct: 481 YAKCGAVNDARL-------VFLVMPN 499
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 145/355 (40%), Gaps = 52/355 (14%)
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDE 125
R D +SL+ +A R+ D+ F +P +D + N++++ + L
Sbjct: 86 FRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAP 145
Query: 126 GLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDNMFIASS 182
+ F +L ++P SF++++ A + L QLH ++++G + ++++
Sbjct: 146 AVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNA 205
Query: 183 LLDMYAKCGNIRL---ARCIFDKMDLHDIVSWTAVIMGNALHGNAH-------------- 225
L+ +Y KC AR + D+M D ++WT +++G G+ +
Sbjct: 206 LIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFD 265
Query: 226 -----------------DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
DA LF +M + V + F +VL+AC++AG S
Sbjct: 266 VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQ 325
Query: 269 MTKDYGIAPSFEHYAAVA------DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
+ + + P+F AA+ L + GK+ A M+ + W T+LS
Sbjct: 326 IIR---LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVS-WNTILSG-- 379
Query: 323 VHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMK 377
+ + K E ++ N +++++ + Y +DA L MR + +K
Sbjct: 380 -YIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 433
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 327/514 (63%), Gaps = 6/514 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++VSW +I G +N EEA+++ +M ++P+ FT S +L VI E
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSE 414
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H ++ + + +G++L++ Y K +VE++ ++F + KD ++W++++AG Q G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +K F ++ IKP +FSSI+ CA ++ GKQ HG I++ D ++ ++S
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MYAK GNI A +F + D+VSW ++I G A HG A A+ +F++M+K VK
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V F+ V AC+HAGL+++ YF+ M +D IAP+ EH + + DL RAG+L++A +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I NM +W T+L+ACRVHK EL AEKI + P + AYV+LSN YA + W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
++ A +R M + +KK P SWIEVKNK Y+F+AGD+SHP +I L++L R++
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VL D+++E K+ +L HSERLAI FG+I TP G+ + IIKNLRVCGDCH I
Sbjct: 775 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVI 834
Query: 482 KFISKIVQREIIVRDNSRFHHF-EDGKCSCGDYW 514
K I+KI +REI+VRD++RFHHF DG CSCGD+W
Sbjct: 835 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 169/306 (55%), Gaps = 6/306 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++V+W T+I G ARN + +E L + +M N +P+SFT ++ L + A+ +G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +++GLD + + +SLIN+Y KC V + LF VK ++WNS+I+G N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L F M + ++ SF+S++ CA+L L +QLH +++ GF + I
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+KC + A +F ++ + ++VSWTA+I G + +A+ LF +M++ GV
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + +LTA +I + + + +Y + + A+ D + GK++EA
Sbjct: 394 RPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAA 448
Query: 300 EFISNM 305
+ S +
Sbjct: 449 KVFSGI 454
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 145/254 (57%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D S+ +++ G +R+G +EA + + + ++ D SSVL + A D + G+
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGR 113
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H I+ G +V +G+SL++ Y K + +D ++F + ++ ++W ++I+G +N
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ DE L F +M +P +F++ + A G Q+H +++NG D + +++
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+++Y KCGN+R AR +FDK ++ +V+W ++I G A +G +A+ +F M + V+
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 242 NSVAFVAVLTACSH 255
+ +F +V+ C++
Sbjct: 294 SESSFASVIKLCAN 307
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%)
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+R+ ++H LF P +D S+ S++ G ++G E + F + ++ FSS++
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
A L G+QLH I+ GF D++ + +SL+D Y K N + R +FD+M ++V
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+WT +I G A + + ++LF +M+ +G +PNS F A L + G+
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/547 (40%), Positives = 327/547 (59%), Gaps = 33/547 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWN++I + G EEAL + ++M N+KP+ T+ VL A D G
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ- 119
+ +H Y R+ + ++ + +++++MY KC VED+ RLF +P KD +SW +++ G +
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 120 ------NGLFD------------------------EGLKFFRQMLIAKI-KPRHVSFSSI 148
G+FD E L+ F ++ ++K KP V+ S
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ ACA L + LG +H I + G N + +SL+DMY KCG+++ A +F ++ D+
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDV 436
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
W+A+I G A+HG+ DAI+LF +M++D VKPN+V F +L ACSH GL+++ ++FN
Sbjct: 437 FVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 496
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M YG+ P +HYA + D+LGRAG L+EA E I M P +VW LL AC +H+NV
Sbjct: 497 MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV 556
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
LA + ++ ++P N GAYV+LSN YA A +W + LR MR+ G+KK P CS IEV
Sbjct: 557 LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHS 447
+ F+ GD SHP +I L E++ R+E GYVP+ +L VEEE K+ L+ HS
Sbjct: 617 GIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHS 676
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LAI FG+I T IRI+KNLRVCGDCH+ K +SK+ REI++RD RFHHF +G
Sbjct: 677 EKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGH 736
Query: 508 CSCGDYW 514
CSC DYW
Sbjct: 737 CSCMDYW 743
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 170/331 (51%), Gaps = 34/331 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P +L +WNT+I A + ++L I +R + PD FT ++ ++ ++
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK HG I+ L ++V I +SLI+ YAKC + +R+F +P +D +SWNS+I VQ
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E L+ F++M +KP ++ ++ ACA + G+ +H I RN +++ +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL 274
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG---------------------- 217
++++LDMY KCG++ A+ +FDKM DIVSWT +++G
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334
Query: 218 ---NAL------HGNAHDAISLFEQME-KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
NAL G +A+ LF +++ KP+ V V+ L+AC+ G +D + +
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIH 393
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
K G+ + ++ D+ + G LQ+A
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKA 424
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 339/514 (65%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW ++I G A+N +AL + +M + +P+ FTLSS++ G
Sbjct: 135 MPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCG 194
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH ++G +NV +GSSL++MYA+C + ++ +F L K+ +SWN++IAG +
Sbjct: 195 RQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARK 254
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M +P ++S+++ +C+ + L GK LH ++++ ++
Sbjct: 255 GEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVG 314
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYAK G+IR A +FDK+ D+VS ++++G A HG +A F++M + G++
Sbjct: 315 NTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIE 374
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F++VLTACSHA L+D+ YF M K Y I P HYA + DLLGRAG L +A
Sbjct: 375 PNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKS 433
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT +W LL A ++HKN E+ A+++F +DP+ G + +L+N YA+A R
Sbjct: 434 FIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGR 493
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A +R M++ G+KK PACSW+EV+N + FVA D +HP +I++ ++L +++++
Sbjct: 494 WEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKE 553
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL V++++K+ L YHSE+LA+ F ++ TP G+TIRI+KN+RVCGDCH+A
Sbjct: 554 IGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSA 613
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK++S +V+REIIVRD +RFHHF DG CSCGDYW
Sbjct: 614 IKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 132/227 (58%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
+L+PD +++L + +GK +H + + ++ I +SL+ MYA+C +E +
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
RLF +P +D +SW S+I G QN + L F +ML +P + SS++ C ++
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ + G+Q+H C + G N+F+ SSL+DMYA+CG + A +FDK+ + VSW A+I
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G A G +A++LF +M+++G +P + A+L++CS G +++
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQG 295
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/513 (43%), Positives = 319/513 (62%), Gaps = 8/513 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D+ +W ++ G +NG+ +EA + M N S + ++++ + + + +
Sbjct: 262 PVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN----SVSWNAIIAGYVQCKRMDQAR 317
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ NV +++I YA+ + + F +P +D+ISW +IIAG Q+G
Sbjct: 318 ELFEAMPCQ----NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG 373
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L F +M + +F+S + CA + L LGKQ+HG +++ G + ++ +
Sbjct: 374 YGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGN 433
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MY KCGNI A +F+ ++ ++VSW +I G A HG +A+ LFE M+K G+ P
Sbjct: 434 ALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILP 493
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V V VL+ACSH GL+DK YF SMT+DYGI + +HY + DLLGRAG+L +A
Sbjct: 494 DDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNL 553
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ NM P W LL A R+H N EL K A+ IF ++P+N G YV+LSN YAA+ RW
Sbjct: 554 MKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRW 613
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
D +R+ MR++G+KK P SW+EV+NK + F GD HP RI L+EL +M++E
Sbjct: 614 GDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKE 673
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV TK VLHDVEEE+K ++L YHSE+LA+ FGI+ P G IR+IKNLRVC DCH A+
Sbjct: 674 GYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAM 733
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV R II+RD+ RFHHF G+CSCGDYW
Sbjct: 734 KHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +SW +I G A++G EEAL++ +M + + T +S L A+ + G
Sbjct: 354 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG ++ GL++ +G++L+ MY KC ++D++ +F + K+ +SWN++IAG ++
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 473
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L F M I P V+ ++ AC+H + G + + ++ G N
Sbjct: 474 GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKH 533
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN---AHDAISLFEQME 235
+ ++D+ + G + A+ + M D +W A++ + +HGN A + +ME
Sbjct: 534 YTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME 593
Query: 236 KD 237
D
Sbjct: 594 PD 595
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 39/287 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF--------- 51
MP D+VSWN ++ G A+NG +EA I +M N S + + +L +
Sbjct: 137 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDA 192
Query: 52 -------ADYVDVIKGKEIHGYAIRHGL-----------DANVCIGSSLINMYAKCARVE 93
AD+ + + GY R+ L + + +++I+ YA+ +
Sbjct: 193 RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 252
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ RLF PV+D +W ++++G VQNG+ DE + F M + VS+++I+
Sbjct: 253 EAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM----PEKNSVSWNAIIAGYV 308
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ ++L + N+ ++++ YA+ G+I AR FD+M D +SW A
Sbjct: 309 QCKRMDQARELFEAMP----CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA 364
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+I G A G +A+ LF +M++DG + N F + L+ C+ ++
Sbjct: 365 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 159/376 (42%), Gaps = 33/376 (8%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+V WN I RNG + AL + M + + +S L Y + +
Sbjct: 47 ADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFY---LARQLF 103
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
R + NV I + + AR+ LF +P +D +SWN++++G QNG
Sbjct: 104 EKMPTRDLVSWNVMISGCVRYRNLRAARL-----LFDQMPERDVVSWNAMLSGYAQNGYV 158
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E + F +M +S++ ++ A + ++L + D + + +
Sbjct: 159 KEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCM 210
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ Y K + AR IFD+M D VSW +I G A +G +A LFE+ V
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV---- 266
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ A+++ G++D+A F+ M + ++ + A+ + ++ +A E
Sbjct: 267 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFE 321
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
M P +NV W T+++ + ++ A +++ D + A + YA +
Sbjct: 322 AM---PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIA---GYAQSGYG 375
Query: 362 KDAASLRVFMRNKGMK 377
++A L V M+ G +
Sbjct: 376 EEALHLFVEMKRDGER 391
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 43/196 (21%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
DA++ + I + + + + + RLF +P + +ISWN++I+GC+ N F + +
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKF-----YLAR 100
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
L K+ R + ++M + GC+ + N
Sbjct: 101 QLFEKMPTRDLVSWNVM--------------ISGCV--------------------RYRN 126
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+R AR +FD+M D+VSW A++ G A +G +A +F++M NS+++ +L A
Sbjct: 127 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAA 182
Query: 253 CSHAGLIDKAWSYFNS 268
G I+ A F S
Sbjct: 183 YVQNGRIEDARRLFES 198
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 327/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DL+SWN++I N A+++ ++M ++PD TL S+ I + D+
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + G+ +R G ++ IG++++ MYAK V+ + +F LP D ISWN+II+G Q
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 120 NGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG E ++ + M +I ++ S++PAC+ L G +LHG +++NG ++F
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL DMY KCG + A +F ++ + V W +I + HG+ A+ LF++M +G
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ + FV +L+ACSH+GL+D+ F M DYGI PS +HY + D+ GRAG+L+ A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FI +M P ++W LLSACRVH NV+L +E +F ++P ++G +V+LSN YA+A
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 667
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ +R KG++KTP S +EV NK F G+++HP Y + L L ++
Sbjct: 668 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 727
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD + VL DVE+++K+++L HSERLAI F +I TP TTIRI KNLRVCGDCH
Sbjct: 728 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 787
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KFISKI +REIIVRD++RFHHF++G CSCGDYW
Sbjct: 788 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 196/358 (54%), Gaps = 14/358 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWN +I G ++G +EAL + + + DS T+ S+L + D +G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG 266
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH Y+I+HGL++ + + + LI++YA+ R+ D ++F + V+D ISWNSII N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
+ F++M +++I+P ++ S+ + L + + + G +R G F +++ I
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG- 238
++++ MYAK G + AR +F+ + D++SW +I G A +G A +AI ++ ME++G
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ N +V+VL ACS AG + + + K+ G+ ++AD+ G+ G+L++A
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
+S + P N W TL++ H + E A + +++ + P+++ +LS
Sbjct: 506 ---LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
+S + V +F ++ K +H + NVCI + L+N+Y V + F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ-MLIAKIKPRHVSFSSIMPACAHLTTL 158
+ +D +WN +I+G + G E ++ F ML + + P + +F S++ AC T+
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 166
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G ++H ++ GF ++++A+SL+ +Y++ + AR +FD+M + D+ SW A+I G
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 219 ALHGNAHDAISLFEQMEKDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
GNA +A++L +G++ +SV V++L+AC+ AG ++ + +S + +G+
Sbjct: 227 CQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLES 280
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ DL G+L++ + M+
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 316/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D ++W T++ G +NGL +ALN R+M + D +T S+L + +G
Sbjct: 232 MTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH Y IR D NV +GS+L++MY+KC ++ + F + K+ ISW ++I G QN
Sbjct: 292 KQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQN 351
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E ++ F +M I P + S++ +CA+L +L G Q H + +G + ++
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG+I A +FD+M HD VSWTA++ G A G A + I LFE+M VK
Sbjct: 412 NALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVK 471
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+ VL+ACS AG ++K SYF+SM KD+GI P +HY + DL R+G+L+EA E
Sbjct: 472 PDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEE 531
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P W TLLSACR+ ++E+ AE + IDP N +YV+L + +A
Sbjct: 532 FIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGN 591
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A LR MR++ +KK P CSWI+ KNK + F A D+SHPF I E L+ L +M +
Sbjct: 592 WNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLE 651
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY PD VLHDV + K +++ +HSE+LAI FG++ P IRI+KNLRVC DCH A
Sbjct: 652 EGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNA 711
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKI R+I+VRD RFH F +G CSCGD+W
Sbjct: 712 TKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 175/338 (51%), Gaps = 34/338 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
M D VS+N VI G + G + A+ + + +++P T+S+++ + D
Sbjct: 98 MAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRA 157
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------ 88
G++ H +R G N +GS L+ MYAK
Sbjct: 158 LGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLL 217
Query: 89 -CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
C VE++ RLF ++ +D I+W +++ G QNGL + L FFR+M I +F S
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ AC L+ L GKQ+H IIR +DDN+F+ S+L+DMY+KC +I+ A F +M +
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN 337
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
I+SWTA+I+G +G + +A+ +F +M++DG+ P+ +V+++C++ +++ + F+
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG-AQFH 396
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ G+ A+ L G+ G +++A+ M
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 17/266 (6%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ ++L++ A ++D LF + +D +S+N++IAG G ++ + +L
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 135 IA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
A ++P ++ S+++ A + L LG+Q H I+R GF N F+ S L+ MYAK G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
I A+ +FD+MD ++V + +I G +A LFE M + + + ++T
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVM----TDRDCITWTTMVTG 246
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA---YEFISNMHAGP 309
+ GL +A ++F M + GIA + ++ G L++ + +I H
Sbjct: 247 FTQNGLESQALNFFRRM-RFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHY-- 303
Query: 310 TENVW-----LTLLSACRVHKNVELA 330
+NV+ + + S CR K E A
Sbjct: 304 DDNVFVGSALVDMYSKCRSIKPAETA 329
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/513 (43%), Positives = 319/513 (62%), Gaps = 8/513 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D+ +W ++ G +NG+ +EA + M N S + ++++ + + + +
Sbjct: 181 PVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN----SVSWNAIIAGYVQCKRMDQAR 236
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ NV +++I YA+ + + F +P +D+ISW +IIAG Q+G
Sbjct: 237 EL----FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG 292
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L F +M + +F+S + CA + L LGKQ+HG +++ G + ++ +
Sbjct: 293 YGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGN 352
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MY KCGNI A +F+ ++ ++VSW +I G A HG +A+ LFE M+K G+ P
Sbjct: 353 ALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILP 412
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V V VL+ACSH GL+DK YF SMT+DYGI + +HY + DLLGRAG+L +A
Sbjct: 413 DDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNL 472
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ NM P W LL A R+H N EL K A+ IF ++P+N G YV+LSN YAA+ RW
Sbjct: 473 MKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRW 532
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
D +R+ MR++G+KK P SW+EV+NK + F GD HP RI L+EL +M++E
Sbjct: 533 GDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKE 592
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV TK VLHDVEEE+K ++L YHSE+LA+ FGI+ P G IR+IKNLRVC DCH A+
Sbjct: 593 GYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAM 652
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV R II+RD+ RFHHF G+CSCGDYW
Sbjct: 653 KHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +SW +I G A++G EEAL++ +M + + T +S L A+ + G
Sbjct: 273 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 332
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG ++ GL++ +G++L+ MY KC ++D++ +F + K+ +SWN++IAG ++
Sbjct: 333 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 392
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L F M I P V+ ++ AC+H + G + + ++ G N
Sbjct: 393 GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKH 452
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN---AHDAISLFEQME 235
+ ++D+ + G + A+ + M D +W A++ + +HGN A + +ME
Sbjct: 453 YTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME 512
Query: 236 KD 237
D
Sbjct: 513 PD 514
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 39/287 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF--------- 51
MP D+VSWN ++ G A+NG +EA I +M N S + + +L +
Sbjct: 56 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDA 111
Query: 52 -------ADYVDVIKGKEIHGYAIRHGL-----------DANVCIGSSLINMYAKCARVE 93
AD+ + + GY R+ L + + +++I+ YA+ +
Sbjct: 112 RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 171
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ RLF PV+D +W ++++G VQNG+ DE + F M + VS+++I+
Sbjct: 172 EAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM----PEKNSVSWNAIIAGYV 227
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ ++L + N+ ++++ YA+ G+I AR FD+M D +SW A
Sbjct: 228 QCKRMDQARELFEAMPCQ----NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA 283
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+I G A G +A+ LF +M++DG + N F + L+ C+ ++
Sbjct: 284 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 330
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 25/282 (8%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +P +D +SWN++++G QNG E + F +M +S++ ++ A
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGR 107
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
+ ++L + D + + ++ Y K + AR IFD+M D VSW +I G
Sbjct: 108 IEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 163
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A +G +A LFE+ V + A+++ G++D+A F+ M + ++
Sbjct: 164 YAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS- 218
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAE 335
+ A+ + ++ +A E M P +NV W T+++ + ++ A +
Sbjct: 219 ----WNAIIAGYVQCKRMDQARELFEAM---PCQNVSSWNTMITGYAQNGDIAQARNFFD 271
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMK 377
++ D + A + YA + ++A L V M+ G +
Sbjct: 272 RMPQRDSISWAAIIA---GYAQSGYGEEALHLFVEMKRDGER 310
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ +V +++++ YA+ V+++ +F +P K++ISWN ++A VQNG ++ + F
Sbjct: 58 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES 117
Query: 133 -----------MLIAKIKP-RHVSFSSI---MPACAHLT--TLHLGKQLHGCII--RNGF 173
M+ +K R V I MP ++ T+ G +G ++ + F
Sbjct: 118 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF 177
Query: 174 DD----NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
++ ++F ++++ Y + G + AR +FD M + VSW A+I G A
Sbjct: 178 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 237
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
LFE M V ++ ++T + G I +A ++F+ M + I+ +AA+
Sbjct: 238 LFEAMPCQNVS----SWNTMITGYAQNGDIAQARNFFDRMPQRDSIS-----WAAIIAGY 288
Query: 290 GRAGKLQEA-YEFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMG 346
++G +EA + F+ G N + + LS C +EL +V ++ + G
Sbjct: 289 AQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLES-G 347
Query: 347 AYV--ILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFY 404
YV L Y DA ++ +G+++ SW +AG H F
Sbjct: 348 CYVGNALLVMYCKCGNIDDA-----YIVFEGIEEKEVVSW-------NTMIAGYARHGFG 395
Query: 405 HRINEALKELLERMEQEGYVPD 426
EAL L E M++ G +PD
Sbjct: 396 ---KEALM-LFESMKKTGILPD 413
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
N+R AR +FD+M D+VSW A++ G A +G +A +F++M NS+++ +L
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLA 100
Query: 252 ACSHAGLIDKAWSYFNS 268
A G I+ A F S
Sbjct: 101 AYVQNGRIEDARRLFES 117
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 315/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SW +I G A G +A+ + QM N +P T SS+L + + +GK++
Sbjct: 597 DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVI 656
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + G + + +G++LI+ Y+K + D+ +F +P +D +SWN IIAG QNGL
Sbjct: 657 AYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQ 716
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
++F QM + P SF S++ AC+ + L GK++H I++ ++ + ++L+
Sbjct: 717 TAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALI 776
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+ A+ +FD + ++V+W A+I A HG A A+ F MEK+G+KP+
Sbjct: 777 SMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGS 836
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L+AC+HAGL+ + + F+SM +YG+ P+ EHY + LLGRA + QEA I+
Sbjct: 837 TFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQ 896
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLL ACR+H N+ LA A ++ N Y++LSN YAAA RW D
Sbjct: 897 MPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDV 956
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M +G++K P SWIEV N + F+A D+SHP I LK L ME+ GY
Sbjct: 957 AKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYF 1016
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ VLHD+ + ++ L HSERLAI +G+I TP GT IRI KNLR+CGDCHTA KFI
Sbjct: 1017 PDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFI 1076
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+V REII RD++RFH F++GKCSC DYW
Sbjct: 1077 SKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 154/262 (58%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DL+SWN +I G AR EA+ + +QM + +KP T +L A+ G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH +R G+ +N + ++L+NMY +C + ++ +F +D ISWNS+IAG Q+
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ K F++M +++P +++F+S++ C + L LGKQ+HG I +G ++ +
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY +CG+++ AR +F + D++SWTA+I G A G AI LF QM+ +G +
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P F ++L C+ + +D+
Sbjct: 631 PVKSTFSSILKVCTSSACLDEG 652
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 164/301 (54%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN++I G A++G YE A + ++M N L+PD+ T +SVL + + GK+IH
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G GL +V +G++LINMY +C ++D+ +F L +D +SW ++I GC G
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ ++ F QM +P +FSSI+ C L GK++ I+ +G++ + + ++L+
Sbjct: 616 KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALI 675
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
Y+K G++ AR +FDKM DIVSW +I G A +G A+ QM++ V PN
Sbjct: 676 SAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKF 735
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+FV++L ACS +++ + K + AA+ + + G EA E N
Sbjct: 736 SFVSLLNACSSFSALEEGKRVHAEIVKR-KLQGDVRVGAALISMYAKCGSQGEAQEVFDN 794
Query: 305 M 305
+
Sbjct: 795 I 795
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 172/317 (54%), Gaps = 2/317 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V +N +I LA++G EA +M + + + T S+L + + GK IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G ++V IG++LI+MYA+C + + LF +P +D ISWN+IIAG +
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ ++QM +KP V+F ++ ACA+ + GK +H I+R+G N +A++L+
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY +CG++ A+ +F+ D++SW ++I G+A HG+ A LF++M+ + ++P+++
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +VL+ C + ++ +T+ G+ A+ ++ R G LQ+A +
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 305 MHAGPTENVWLTLLSAC 321
+ + W ++ C
Sbjct: 593 LQHRDVMS-WTAMIGGC 608
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 182/350 (52%), Gaps = 4/350 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VS+NT++ A+ +E L + QM + + PD T ++L F + +GK IH
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH 252
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ GL++++ +G++L+ M +C V+ + + F +D + +N++IA Q+G
Sbjct: 253 KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNV 312
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + + +M + ++ SI+ AC+ L GK +H I +G ++ I ++L+
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALI 372
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYA+CG++ AR +F M D++SW A+I G A + +A+ L++QM+ +GVKP V
Sbjct: 373 SMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRV 432
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L+AC+++ + + GI + A+ ++ R G L EA
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
A + W ++++ H + E A K+ +++ ++P+N+ +LS
Sbjct: 492 TQARDVIS-WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SWN++I A+ G ++A + +M N P+ T S+L ++ G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH I+ G + + +SL++MY KC + + ++F + +D +S+N+++ Q
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L F QM I P V++ +++ A + L GK++H + G + ++ +
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ M +CG++ A+ F D+V + A+I A HG+ +A + +M DGV
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N ++++L ACS + ++ A +S + G + + A+ + R G L +A E
Sbjct: 328 LNRTTYLSILNACSTSKALE-AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 301 FISNM 305
M
Sbjct: 387 LFYTM 391
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ K IH + + ++ + + LINMY KC V D+H++F +P +D ISWNS+I+
Sbjct: 45 EAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYA 104
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G + + F +M A P +++ SI+ AC L GK++H II+ G+ +
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPR 164
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SLL MY KCG++ AR +F + D+VS+ ++ A + + LF QM +G
Sbjct: 165 VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG 224
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V ++ +L A + ++D+ + +T + G+ A+ + R G + A
Sbjct: 225 ISPDKVTYINLLDAFTTPSMLDEG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283
Query: 299 YE 300
+
Sbjct: 284 KQ 285
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN +I G A+NGL + A+ QM ++ P+ F+ S+L + + + +G
Sbjct: 694 MPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEG 753
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H ++ L +V +G++LI+MYAKC ++ +F + K+ ++WN++I Q+
Sbjct: 754 KRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQH 813
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
GL + L FF M IKP +F+SI+ AC H + G Q+ + G +
Sbjct: 814 GLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEH 873
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
L+ + + + A + ++M D W ++ +HGN I+L E +
Sbjct: 874 YGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN----IALAEHAANNA 929
Query: 239 VKPNS 243
+K N+
Sbjct: 930 LKLNA 934
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
++ +++ C L K++H ++ ++F+++ L++MY KC ++ A +F +
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M D++SW ++I A G A LFE+M+ G PN + ++++LTAC ++
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 263 WSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + K Y P ++ ++ + G+ G L A + + +
Sbjct: 148 KKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGI 189
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/543 (41%), Positives = 324/543 (59%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+T+I L+RN ++ AL ++R+M + ++P + S++ +FAD ++ GK +H
Sbjct: 189 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248
Query: 65 GYAIRHGLDANVCIGSS--LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV---- 118
Y IR+ + ++ + ++ L++MYAKC + + +LF L K +SW ++IAGC+
Sbjct: 249 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 308
Query: 119 ---------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
Q D+ F QM + ++P V+ S++
Sbjct: 309 LEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSL 368
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA L LGK +H I + + + + ++L+DMYAKCG+I A +F + DI W
Sbjct: 369 CAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 428
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I G A+HG +A+ +F +ME+ GVKPN + F+ +L ACSHAGL+ + F M
Sbjct: 429 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH 488
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
+G+ P EHY + DLLGRAG L EA+E I +M P VW L++ACR+HKN +L
Sbjct: 489 TFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGE 548
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A ++ I+P N G V++SN YAAA RW DAA +R M+ GMKK P S IEV
Sbjct: 549 LAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTV 608
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ GD+SHP RINE L E+ ++ + GYVPDT VL +++EE+K+ L YHSE+LA
Sbjct: 609 HEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLA 668
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FG+I T T IRI+KNLRVC DCH A K +SKI R IIVRD +RFHHF +G CSCG
Sbjct: 669 MAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCG 728
Query: 512 DYW 514
DYW
Sbjct: 729 DYW 731
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 162/295 (54%), Gaps = 7/295 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+S WN VI + ALN+ Q+ ++ + D+F SVL GKE
Sbjct: 86 LSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKE 145
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IHG+ ++ GLD +V +G++L+ MY +CA VE + +F + +D +SW+++I +N
Sbjct: 146 IHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKE 205
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
FD L+ R+M +++P V+ S++ A + +GK +H +IRN +++M + ++
Sbjct: 206 FDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT 265
Query: 183 --LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
LLDMYAKCG++ LAR +F+ + +VSWTA+I G +A +LF+ + V
Sbjct: 266 TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV- 324
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ + A+L+A + A ID+A++ F+ M + G+ P+ ++ L AG L
Sbjct: 325 ---MIWTAMLSAYAQANCIDQAFNLFDQM-RTSGVRPTKVTIVSLLSLCAVAGAL 375
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/517 (42%), Positives = 337/517 (65%), Gaps = 4/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I ++ G EALN+ +M + +P+ FT +++L + G
Sbjct: 151 MPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 210
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI+ ++++ +GSSL++MYAK R+ D+H +F LP +D ++ +II+G Q
Sbjct: 211 RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM 270
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E LK FRQ+ I + V+++S++ A + L L+ GKQ+H ++R+G + +
Sbjct: 271 GLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 330
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ AR IFD M +SW A+++G + HG A + + LF+ M E++ V
Sbjct: 331 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKV 390
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMT--KDYGIAPSFEHYAAVADLLGRAGKLQE 297
KP+S+ ++AVL+ CSH L D F +M KD GI P HY V DLLGRAG+++E
Sbjct: 391 KPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD-GIEPDIGHYGCVVDLLGRAGRVEE 449
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A++FI M PT +W +LL +CRVH +VE+ V +K+ ++P N G YVILSN YA+
Sbjct: 450 AFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYAS 509
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A +W+D ++R M+ K + K P SW+E+ + F A D +HP + + +KEL +
Sbjct: 510 AGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIK 569
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++GYVPD VL+DV+EEQK+ +L HSE+LA+ FG+I TP+GTTIR+IKNLR+C DC
Sbjct: 570 FKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDC 629
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+ KF+S++ R +I+RD +RFH+ G CSCGDYW
Sbjct: 630 HSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 114/196 (58%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ +H + I+ +V + + LI +Y KC + D+ +F +P K+ +SW ++I+
Sbjct: 108 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYS 167
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G E L F +ML + +P H +F++I+ +C G+Q+H I+ ++ +MF
Sbjct: 168 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 227
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSLLDMYAK G I A +F + D+V+ TA+I G A G +A+ LF Q++ +G
Sbjct: 228 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 287
Query: 239 VKPNSVAFVAVLTACS 254
+ NSV + +VLTA S
Sbjct: 288 MNSNSVTYASVLTALS 303
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 69/122 (56%)
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
QM I + + + +I+ C + G+++H +I+ + ++++ + L+ +Y KC
Sbjct: 80 QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 139
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ AR +FD+M ++VSWTA+I + G A +A++LF +M + +PN F +LT
Sbjct: 140 CLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 199
Query: 252 AC 253
+C
Sbjct: 200 SC 201
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/541 (42%), Positives = 326/541 (60%), Gaps = 31/541 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD------- 53
MPV D +SWNT+I G A+ G L+ R++ + + D FT ++++ +
Sbjct: 230 MPVRDAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285
Query: 54 --YVDVIKGKE-------IHGYAIRHGLD-----------ANVCIGSSLINMYAKCARVE 93
+ D + K I GY +D N+ +++I Y + +
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ + F ++P +D +SW +IIAG Q+G ++E L F ++ +F + CA
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L LGKQ+HG ++ G+ F+ ++LL MY KCG+I A F+ ++ D+VSW
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT 465
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
++ G A HG A+++FE M+ GVKP+ + V VL+ACSH GL+D+ YF SMTKDY
Sbjct: 466 MLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDY 525
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G+ P+ +HY + DLLGRAG+L+EA + I NM P W LL A R+H N EL K
Sbjct: 526 GVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKA 585
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
AE +F ++P N G YV+LSN YAA+ RW DA +R MR+ G++K P SW+EV+NK +
Sbjct: 586 AEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD SHP RI L+EL +M +EGYV TK VLHDVEEE+K+++L YHSE+LA+
Sbjct: 646 FSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVA 705
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FGI+ P G IR++KNLRVC DCH+AIK ISKIV R II+RD+ RFHHF +G CSCGDY
Sbjct: 706 FGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDY 765
Query: 514 W 514
W
Sbjct: 766 W 766
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 121/261 (46%), Gaps = 57/261 (21%)
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVW 314
+ GL+D YF M ++Y + P+ +HY + DLLGR +L+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 315 LTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNK 374
LL A R+H N EL K A+ F + P N G MR+
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSGISK---------------------MRDV 857
Query: 375 GMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDV 434
G++K P SW EV+NK + F G F R E + LE + ++
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG----LFLSRERENIG-FLEEL----------DLKMRE 902
Query: 435 EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN-LRVCGDCHTAIKFISKIVQREII 493
EE+K+ L Y SE LA GI+ P G R++K + VC DC +AIK +SKIV R I
Sbjct: 903 REEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962
Query: 494 VRDNSRFHHFEDGKCSCGDYW 514
+RD+ H F + CSCG+YW
Sbjct: 963 LRDS---HRFNESICSCGEYW 980
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 43/283 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF--------- 51
MP D+VSWN+++ G A+NG +EA + M N S + + +L +
Sbjct: 137 MPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIEEA 192
Query: 52 -------ADYVDVIKGKEIHGYAIRHGL--DA----------NVCIGSSLINMYAKCARV 92
+D+ D+I + G +R DA + +++I+ YA+ +
Sbjct: 193 CLLFESKSDW-DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGL 251
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ RLF P +D +W ++++G VQNG+ DE FF +M + VS+++++
Sbjct: 252 SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAGY 307
Query: 153 AHLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
+ + ++L + RN N I Y + G+I AR FD M D VSW
Sbjct: 308 VQTKKMDIARELFESMPCRNISSWNTMITG-----YGQIGDIAQARKFFDMMPQRDCVSW 362
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A+I G A G+ +A+++F ++++DG N F L+ C+
Sbjct: 363 AAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 170/379 (44%), Gaps = 45/379 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG-----NVNLKPDSFTLSSVLPIFADYVDVIK 59
D++ WN I RNG + AL++ M + N + +S + + D +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+++ + + ++ Y + R+ D+ RLF L+P KD +SWNS+++G Q
Sbjct: 108 ERDLFSWNV-------------MLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG DE + F M + +S++ ++ A +H G+ C++ D I
Sbjct: 155 NGYVDEAREVFDNM----PEKNSISWNGLLAA-----YVHNGRIEEACLLFESKSDWDLI 205
Query: 180 A-SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+ + + + AR +FDKM + D +SW +I G A G A LF++
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRD 265
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V + A+++ G++D+A ++F+ M + ++ Y A+ + K+ A
Sbjct: 266 V----FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIA 316
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
E +M P N+ W T+++ ++ A K + M+ + ++ + YA
Sbjct: 317 RELFESM---PCRNISSWNTMITGYGQIGDIAQARKFFD---MMPQRDCVSWAAIIAGYA 370
Query: 357 AARRWKDAASLRVFMRNKG 375
+ +++A ++ V ++ G
Sbjct: 371 QSGHYEEALNMFVEIKQDG 389
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D ++ + I+ + + + + +F +P + ++S+N++I+G ++N F+ F Q
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + ++F + +L Y +
Sbjct: 106 MP---------------------------------------ERDLFSWNVMLTGYVRNCR 126
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR +FD M D+VSW +++ G A +G +A +F+ M + NS+++ +L A
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAA 182
Query: 253 CSHAGLIDKAWSYFNS 268
H G I++A F S
Sbjct: 183 YVHNGRIEEACLLFES 198
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/541 (42%), Positives = 326/541 (60%), Gaps = 31/541 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD------- 53
MPV D +SWNT+I G A+ G L+ R++ + + D FT ++++ +
Sbjct: 230 MPVRDAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285
Query: 54 --YVDVIKGKE-------IHGYAIRHGLD-----------ANVCIGSSLINMYAKCARVE 93
+ D + K I GY +D N+ +++I Y + +
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ + F ++P +D +SW +IIAG Q+G ++E L F ++ +F + CA
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L LGKQ+HG ++ G+ F+ ++LL MY KCG+I A F+ ++ D+VSW
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT 465
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
++ G A HG A+++FE M+ GVKP+ + V VL+ACSH GL+D+ YF SMTKDY
Sbjct: 466 MLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDY 525
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G+ P+ +HY + DLLGRAG+L+EA + I NM P W LL A R+H N EL K
Sbjct: 526 GVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKA 585
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
AE +F ++P N G YV+LSN YAA+ RW DA +R MR+ G++K P SW+EV+NK +
Sbjct: 586 AEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD SHP RI L+EL +M +EGYV TK VLHDVEEE+K+++L YHSE+LA+
Sbjct: 646 FSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVA 705
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FGI+ P G IR++KNLRVC DCH+AIK ISKIV R II+RD+ RFHHF +G CSCGDY
Sbjct: 706 FGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDY 765
Query: 514 W 514
W
Sbjct: 766 W 766
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 43/283 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF--------- 51
MP D+VSWN+++ G A+NG +EA + M N S + + +L +
Sbjct: 137 MPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIEEA 192
Query: 52 -------ADYVDVIKGKEIHGYAIRHGL--DA----------NVCIGSSLINMYAKCARV 92
+D+ D+I + G +R DA + +++I+ YA+ +
Sbjct: 193 CLLFESKSDW-DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGL 251
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ RLF P +D +W ++++G VQNG+ DE FF +M + VS+++++
Sbjct: 252 SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAGY 307
Query: 153 AHLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
+ + ++L + RN N I Y + G+I AR FD M D VSW
Sbjct: 308 VQTKKMDIARELFESMPCRNISSWNTMITG-----YGQIGDIAQARKFFDMMPQRDCVSW 362
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A+I G A G+ +A+++F ++++DG N F L+ C+
Sbjct: 363 AAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 170/379 (44%), Gaps = 45/379 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG-----NVNLKPDSFTLSSVLPIFADYVDVIK 59
D++ WN I RNG + AL++ M + N + +S + + D +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+++ + + ++ Y + R+ D+ RLF L+P KD +SWNS+++G Q
Sbjct: 108 ERDLFSWNV-------------MLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG DE + F M + +S++ ++ A +H G+ C++ D I
Sbjct: 155 NGYVDEAREVFDNM----PEKNSISWNGLLAA-----YVHNGRIEEACLLFESKSDWDLI 205
Query: 180 A-SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+ + + + AR +FDKM + D +SW +I G A G A LF++
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRD 265
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V + A+++ G++D+A ++F+ M + ++ Y A+ + K+ A
Sbjct: 266 V----FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIA 316
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
E +M P N+ W T+++ ++ A K + M+ + ++ + YA
Sbjct: 317 RELFESM---PCRNISSWNTMITGYGQIGDIAQARKFFD---MMPQRDCVSWAAIIAGYA 370
Query: 357 AARRWKDAASLRVFMRNKG 375
+ +++A ++ V ++ G
Sbjct: 371 QSGHYEEALNMFVEIKQDG 389
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D ++ + I+ + + + + +F +P + ++S+N++I+G ++N F+ F Q
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + ++F + +L Y +
Sbjct: 106 MP---------------------------------------ERDLFSWNVMLTGYVRNCR 126
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR +FD M D+VSW +++ G A +G +A +F+ M + NS+++ +L A
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAA 182
Query: 253 CSHAGLIDKAWSYFNS 268
H G I++A F S
Sbjct: 183 YVHNGRIEEACLLFES 198
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/512 (43%), Positives = 326/512 (63%), Gaps = 3/512 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+VSW+ +I A +G +EAL + +M N ++P++ T + V D+ +G+EIH
Sbjct: 51 VVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIH 110
Query: 65 GYAIRHG--LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
A+ G +N + ++L+NMY +C +E++ ++F + DA SW S+I C +N
Sbjct: 111 ALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCE 170
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ F +M + I P V+ +S++ ACA L +GKQ+H + +GF ++ ++
Sbjct: 171 LLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTA 230
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LLDMYAKCG++ + +F M+ + VSWTA+I A HG +A+ LF++M +G+ +
Sbjct: 231 LLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVAD 290
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
+ F+ VL ACSHAGLI ++ +F+SM +DY IAP+ HY D +GRAG+LQ+A E I
Sbjct: 291 ATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELI 350
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
+M P W TLL+ACR+H E A KVAE + + P + AY +L N YAA R+
Sbjct: 351 HSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYG 410
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
D +R M ++G+KK P S+IEVKNK + FVAGD++HP I L++L RM + G
Sbjct: 411 DQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAG 470
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVP+TK+VLH V EE+K+ L+ HSE+LAI FG+I TP GT + I+KNLRVC DCH A K
Sbjct: 471 YVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATK 530
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I+KI++R I+VRD RFHHFEDG+CSC DYW
Sbjct: 531 VIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 15/295 (5%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IH G + L++MYAKC ++++ +F + + +SW+++I
Sbjct: 3 EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA 62
Query: 119 QNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF--DD 175
+G E L F +M +++P ++F+ + AC + L G+++H + +G
Sbjct: 63 LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N + ++LL+MY +CG++ AR +FD MD D SWT++I + +A+ LF +M
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+G+ P SV +VL AC+ +G + K +S G S A+ D+ + G L
Sbjct: 183 LEGIPPTSVTLASVLNACACSGAL-KVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 241
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVH----------KNVELAGKVAEKIFMI 340
+ + + + M + + W +++A H K + L G VA+ I
Sbjct: 242 ECSSKVFTAMETRNSVS-WTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFI 295
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D SW ++I N EAL + +M + P S TL+SVL A + G
Sbjct: 150 MDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVG 209
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH G ++V ++L++MYAKC +E S ++F + ++++SW ++IA Q+
Sbjct: 210 KQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQH 269
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ-LHGCIIRNGFDDNMFI 179
G DE L+ F++M + + +F ++ AC+H + + H +
Sbjct: 270 GQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETH 329
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
LD + G ++ A + M H + ++W ++ +H A A + E + K
Sbjct: 330 YCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSK 387
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 321/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW +I G ++ L+ EAL + ++M N ++ D+ SS + A + +G++IH
Sbjct: 480 DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH 539
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G ++ IG++L+++YA+C R +D++ F + KD ISWN++I+G Q+G +
Sbjct: 540 AQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCE 599
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F QM A ++ +F S + A A+ + GKQ+H +I+ G+D ++ L+
Sbjct: 600 EALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLI 659
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y+KCG+I A+ F +M ++VSW A+I G + HG +A+SLFE+M++ G+ PN V
Sbjct: 660 TLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHV 719
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL+ACSH GL+++ SYF SM+K++G+ P EHY V DLLGRA L A EFI
Sbjct: 720 TFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEE 779
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W TLLSAC VHKN+E+ A + ++P + YV+LSN YA + +W
Sbjct: 780 MPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYR 839
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+++G+KK P SWIEVKN +AF GD+ HP +I E + +L ER + GYV
Sbjct: 840 DRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYV 899
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D +L+DVE+EQK Y HSE+LA+ FG++ + IR+IKNLRVC DCH IKF+
Sbjct: 900 QDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFV 959
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R I+VRD RFHHFE G CSC DYW
Sbjct: 960 SKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 167/300 (55%), Gaps = 11/300 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +S+N++I GLA+ G + AL + +M +KPD T++S+L A KGK++H
Sbjct: 278 DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLH 337
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y I+ G+ +++ I SL+++Y KC +E +H F ++ + WN ++ Q G
Sbjct: 338 SYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS 397
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E F QM I + P ++ SI+ C L L LG+Q+H +I++GF N+++ S L+
Sbjct: 398 ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLI 457
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAK G + AR I ++ D+VSWTA+I G H +A+ LF++ME G++ +++
Sbjct: 458 DMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNI 517
Query: 245 AFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
F + ++AC+ +++ A SY + ++D I A+ L R G+ Q+AY
Sbjct: 518 GFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGN------ALVSLYARCGRAQDAY 571
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 170/323 (52%), Gaps = 7/323 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
+P S++ WN VI GL L + L + M N+ PD T +SVL + +
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH I HG ++ + + LI++Y+K V+ + +F L +KD++SW ++I+G Q
Sbjct: 131 TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQ 190
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG DE + F QM + + P FSS++ AC + LG+QLHG I++ G F+
Sbjct: 191 NGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFV 250
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ +Y++ GN+ A IF KM D +S+ ++I G A G + A+ LFE+M+ D +
Sbjct: 251 CNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V ++L+AC+ G K +S G++ ++ DL + ++ A+
Sbjct: 311 KPDCVTVASLLSACASVGAGYKG-KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 300 EFISNMHAGPTENV--WLTLLSA 320
E+ TENV W +L A
Sbjct: 370 EYFLTTE---TENVVLWNVMLVA 389
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 167/322 (51%), Gaps = 6/322 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V WN ++V + G E+ I QM L P+ +T S+L + G++IH
Sbjct: 379 NVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH 438
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ G NV + S LI+MYAK ++ + + L +D +SW ++IAG Q+ LF
Sbjct: 439 TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E LK F++M I+ ++ FSS + ACA + L+ G+Q+H +G+ +++ I ++L+
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALV 558
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+YA+CG + A F+K+D D +SW A+I G A G+ +A+ +F QM + GV+ N
Sbjct: 559 SLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLF 618
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F + ++A ++ I K ++M G E + L + G +++A
Sbjct: 619 TFGSAVSATANTANI-KQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFE 677
Query: 305 MHAGPTENV--WLTLLSACRVH 324
M P +NV W +++ H
Sbjct: 678 M---PEKNVVSWNAMITGYSQH 696
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 143/258 (55%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D VSW +I GL++NG +EA+ + QM + P + SSVL G++
Sbjct: 175 LKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQ 234
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HG+ ++ GL + + ++L+ +Y++ + + ++F + +D IS+NS+I+G Q G
Sbjct: 235 LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D L+ F +M + +KP V+ +S++ ACA + + GKQLH +I+ G ++ I S
Sbjct: 295 SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS 354
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LLD+Y KC +I A F + ++V W +++ GN ++ +F QM+ +G+ PN
Sbjct: 355 LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414
Query: 243 SVAFVAVLTACSHAGLID 260
+ ++L C+ G +D
Sbjct: 415 QYTYPSILRTCTSLGALD 432
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 2/251 (0%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
++ K++H + G D +GS LI++Y V+++ +LF +P + WN +I+G
Sbjct: 26 LLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISG 85
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA-HLTTLHLGKQLHGCIIRNGFDD 175
+ L + L F M+ + P +F+S++ AC+ + +Q+H II +GF
Sbjct: 86 LLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGS 145
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ + + L+D+Y+K G++ LA+ +F+++ L D VSW A+I G + +G +AI LF QM
Sbjct: 146 SPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMH 205
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
K V P F +VL+AC+ L K + +G++ A+ L R G L
Sbjct: 206 KSAVIPTPYVFSSVLSACTKIELF-KLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNL 264
Query: 296 QEAYEFISNMH 306
A + S MH
Sbjct: 265 IAAEQIFSKMH 275
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
+ C + +L K+LH I ++GFD + S L+D+Y G + A +FD + +
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ W VI G A + LF M + V P+ F +VL ACS
Sbjct: 76 VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 332/542 (61%), Gaps = 35/542 (6%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+WN +I G G ++EAL + R+M + ++ D T ++++ A+ GK++H Y
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYI 315
Query: 68 IRHGLDAN----VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV----- 118
+++ L+ N + + ++LI +Y K +V+++ ++F +PV++ I+WN+I++G V
Sbjct: 316 LKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375
Query: 119 --------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
QNG DEGLK F+QM + +P +F+ + AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ L L G+QLH ++ G++ ++ + ++++ MYAKCG + A +F M D+VSW
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++I HG+ AI LF+QM K+GV P+ + F+ VLTACSHAGL++K YFNSM +
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YGI P +HYA + DL RAG A I +M + P VW LL+ CR+H N++L +
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
AE++F + P N G YV+LSN YA RW D A +R MR++ ++K PACSWIEV+NK +
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVH 675
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F+ D HP + L++L M++ GY+PDTK VLHD+E EQK++ L HSE+LA+
Sbjct: 676 VFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAV 735
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
FGI+ P T+R+ KN+R+CGDCH A KF+SK+ +REIIVRD RFHHF++G CSC D
Sbjct: 736 GFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRD 795
Query: 513 YW 514
YW
Sbjct: 796 YW 797
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV +L++ +I GLA+NG +E L + +QM +P F + L + + G
Sbjct: 385 MPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENG 444
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + G ++++ +G+++I+MYAKC VE + +F +P D +SWNS+IA Q+
Sbjct: 445 RQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQH 504
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + ++ F QML + P ++F +++ AC+H + G+ ++ + G
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDH 564
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++D++ + G AR + D M W A++ G +HGN I EQ+ K
Sbjct: 565 YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFK 622
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 182/431 (42%), Gaps = 115/431 (26%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIKGK 61
+ D V +N +I G A NG AL + R M + +PD FT +SVL +V + +
Sbjct: 109 MRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG 168
Query: 62 EIHGYAIRHGLDANVCIGSSLIN----MYAK--------CARVEDSHRLFCLLPVKDAIS 109
++H ++ G+ C+ SS++N +Y K C+ + + +LF +P +D ++
Sbjct: 169 QMHCAVVKTGMG---CVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELT 225
Query: 110 WNSIIAGCVQN-------------------------------GLFDEGLKFFRQMLIAKI 138
W ++I G V+N G F E L R+M I
Sbjct: 226 WTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGI 285
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN----MFIASSLLDMYAKCGNIR 194
+ +++++I+ ACA++ + +GKQ+H I++N + N + ++++L+ +Y K +
Sbjct: 286 QFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVD 345
Query: 195 LARCIFDKMDLHDIVSWTAV-------------------------------IMGNALHGN 223
AR IF M + +I++W A+ I G A +G
Sbjct: 346 EARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGF 405
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACS-----------HAGLI----DKAWSYFNS 268
+ + LF+QM DG +P AF LTACS HA L+ + + S N+
Sbjct: 406 GDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNA 465
Query: 269 MTKDYGIAPSFEHYAAV------ADL---------LGRAGKLQEAYEFISNM---HAGPT 310
M Y E +V DL LG+ G +A E M P
Sbjct: 466 MISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPD 525
Query: 311 ENVWLTLLSAC 321
+LT+L+AC
Sbjct: 526 RITFLTVLTAC 536
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 43/356 (12%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
KP L+ +L ++ +V+ +++ + + ++LI Y +E
Sbjct: 44 FKPRGHFLNRLLEMYCKSSNVVYARQL----FEEIPNPDAIARTTLITAYCALGNLELGR 99
Query: 97 RLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+F P+ +D++ +N++I G NG L+ FR M +P +F+S++ A
Sbjct: 100 EIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA--- 156
Query: 155 LTTLHLGK-----QLHGCIIRNGFD-DNMFIASSLLDMYAK--------CGNIRLARCIF 200
L +G Q+H +++ G + + ++LL +Y K C + AR +F
Sbjct: 157 -LVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLF 215
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D+M D ++WT +I G + + + A +FE M V+ A+ A+++ H G
Sbjct: 216 DEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENLGAAWNAMISGYVHCGCFQ 271
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ---EAYEFISNMHAGPTENVWLTL 317
+A + M + GI Y + G Q + + +I P + L++
Sbjct: 272 EALTLCRKM-RFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSV 330
Query: 318 LSA-----CRVHKNVELAGKVAEKIFMIDP-NNMGAYVILSNTYAAARRWKDAASL 367
+A C+ +K E A KIF P N+ + + + Y A R ++A S
Sbjct: 331 SNALITLYCKNNKVDE-----ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSF 381
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD------------ 204
+ L + +H +I +GF + LL+MY K N+ AR +F+++
Sbjct: 28 SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLIT 87
Query: 205 ---------------------LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ D V + A+I G A +G+ H A+ LF M +D +P+
Sbjct: 88 AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147
Query: 244 VAFVAVLTA 252
F +VL+A
Sbjct: 148 FTFTSVLSA 156
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/539 (41%), Positives = 324/539 (60%), Gaps = 39/539 (7%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W +I G A GL+E+ALN QM ++P++FT SS+L + + GK +H A+
Sbjct: 96 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKL----CPIEPGKALHSQAV 151
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK----------------------- 105
+ G D+++ + + L+++YA+ V + +LF +P K
Sbjct: 152 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 211
Query: 106 --------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
D + WN +I G QNG+ +E L FR+ML AK KP V+ S++ AC L
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 271
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G+ +H I NG N+ + ++L+DMY+KCG++ AR +FDK+D D+V+W ++I+G
Sbjct: 272 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVG 331
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+HG + +A+ LF+ M + G+ P ++ F+ +L+AC H+G + + W FN M +YGI P
Sbjct: 332 YAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEP 391
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY + +LLGRAG +++AYE + NM+ P +W TLL ACR+H + L K+ E
Sbjct: 392 KIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVE-- 449
Query: 338 FMIDPN--NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
++D N N G Y++LSN YAA W A LR M++ G+KK P CS IEV NK + F+
Sbjct: 450 LLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFL 509
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFG 455
AG +HP I L+E+ ++ GY P T VLHD+ E +K+ L HSE+LAI FG
Sbjct: 510 AGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFG 569
Query: 456 IICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+I T GTTI+I+KNLRVC DCH K ISKI R+I+VRD +RFHHF +G CSCGDYW
Sbjct: 570 LINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH RHGLD + + L YA R++ S LF W +II G G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L ++ L F+ QML ++P +FSSI+ C + GK LH ++ GFD ++++ +
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163
Query: 182 SLLDMYAKCGNI-------------------------------RLARCIFDKMDLHDIVS 210
LLD+YA+ G++ AR +FD M+ D V
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +I G +G ++A+ LF +M K KPN V ++VL+AC G ++ + +S
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG-RWVHSYI 282
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++ GI + A+ D+ + G L++A
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDA 310
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 20/285 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V WN +I G +NG+ EAL + R+M KP+ T+ SVL + G
Sbjct: 216 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 275
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y +G+ NV +G++L++MY+KC +ED+ +F + KD ++WNS+I G +
Sbjct: 276 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMH 335
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F+ M + P +++F I+ AC H G G I N D I
Sbjct: 336 GFSQEALQLFKSMCRMGLHPTNITFIGILSACG-----HSGWVTEGWDIFNKMKDEYGIE 390
Query: 181 SS------LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ 233
++++ + G++ A + M++ D V W ++ LHG I+L E+
Sbjct: 391 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK----IALGEK 446
Query: 234 MEK---DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ + D NS ++ + + G D + +M KD G+
Sbjct: 447 IVELLVDQNLANSGTYILLSNIYAAVGNWDGV-ARLRTMMKDSGV 490
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/543 (39%), Positives = 331/543 (60%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I G +G+ EA + R+M + D FT +SVL A+ GK +HG
Sbjct: 260 VVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQ 319
Query: 67 AIRHGL----DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN-- 120
R +A + + ++L+ +Y+KC + + R+F + KD +SWN+I++G V++
Sbjct: 320 ITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSC 379
Query: 121 -----------------------------GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
G ++ LK F +M +KP +++ + A
Sbjct: 380 LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISA 439
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C L +L GKQLHG +++ GF+ + ++L+ MYA+CG ++ A +F M D VSW
Sbjct: 440 CGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSW 499
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I HG+ +A+ LF++M +G+ P+ ++F+ VLTAC+H+GL+D+ + YF SM +
Sbjct: 500 NAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKR 559
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
D+GI P +HY + DLLGRAG++ EA + I M PT ++W +LS CR ++EL
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+++F + P + G Y++LSNTY+AA RW DAA +R MR++G+KK P CSWIE NK
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ FV GD HP H++ + L+ + RM + GYVPDTK VLHD+E QK+++L+ HSERLA
Sbjct: 680 HVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLA 739
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FG++ P G T+ ++KNLR+C DCH + F+SK V REI+VRD RFHHF+DG+CSCG
Sbjct: 740 VGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCG 799
Query: 512 DYW 514
+YW
Sbjct: 800 NYW 802
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 172/386 (44%), Gaps = 59/386 (15%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADY--VDVIKGK 61
D V N VI AR A+ + R + + +L+PD ++ +++L + V
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCA 179
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISW-------- 110
++ ++ G + + ++L+ +Y KC +E D+ ++ +P KDA++W
Sbjct: 180 QLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYV 239
Query: 111 -----------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
N++I+G V +G+ E + FR+M++ ++ +F+S
Sbjct: 240 RRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTS 299
Query: 148 IMPACAHLTTLHLGKQLHGCIIR--NGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ ACA+ GK +HG I R F + + + ++L+ +Y+KCGNI +AR IFD M
Sbjct: 300 VLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM 359
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+VSW ++ G A+ +FE+M N ++++ +++ H G + A
Sbjct: 360 KSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK----NELSWMVMVSGYVHGGFSEDAL 415
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM------HAGPTENVWLTL 317
FN M + + P YA G G L+ + ++ + N +T+
Sbjct: 416 KLFNRMRAE-DVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITM 474
Query: 318 LSACRVHKNVELAGKVAEKIFMIDPN 343
+ C K L +F++ PN
Sbjct: 475 YARCGAVKEANL-------MFLVMPN 493
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW ++ G G E+AL + +M ++KP +T + + + + G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG 449
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG+ ++ G + + G++LI MYA+C V++++ +F ++P D++SWN++I+ Q+
Sbjct: 450 KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQH 509
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F +M+ I P +SF +++ AC H + G Q + R+ G
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH 569
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN----AHDAISLFEQM 234
+ L+D+ + G I AR + M S W A++ G G+ AH A LF+
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629
Query: 235 EK-DGV 239
+ DG
Sbjct: 630 PQHDGT 635
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 79 GSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA 136
+SL+ YA R+ + F +P +D + N++I+ + + FR +L +
Sbjct: 91 ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150
Query: 137 -KIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
++P SF++++ A HL + + QL ++++G + ++++L+ +Y KC +
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 194 ---RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
R AR + D+M D ++WT +++G G+ A S+FE+++ VK + V + A++
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVD---VKFD-VVWNAMI 266
Query: 251 TACSHAGLIDKAWSYFNSM 269
+ H+G++ +A+ F M
Sbjct: 267 SGYVHSGMVVEAFELFRRM 285
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 330/528 (62%), Gaps = 23/528 (4%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHGY 66
WN ++ G A+ G+ EEAL + +M + P T++ VLP A + GKE +HGY
Sbjct: 343 WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACA-RSETFAGKEAVHGY 401
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G+ N + ++L+++YA+ +E + +F + +D +SWN++I GCV G +
Sbjct: 402 VLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDA 461
Query: 127 LKFFRQML-------------IA-----KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
+ R+M IA + P +V+ +++P CA L GK++HG
Sbjct: 462 FQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYA 521
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+R+ D ++ + S+L+DMYAKCG + L+R +FD++ ++++W +IM +HG +AI
Sbjct: 522 MRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAI 581
Query: 229 SLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
+LF++M + KPN V F+A L ACSH+G++D+ F+SM +++G+ P+ + +A D
Sbjct: 582 ALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVD 641
Query: 288 LLGRAGKLQEAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMG 346
+LGRAG+L EAY I++M G + + W + L ACR+H+NV L AE++F ++P+
Sbjct: 642 ILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEAS 701
Query: 347 AYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHR 406
YV+L N Y+AA W+ ++ +R MR +G+ K P CSWIE+ + F+AG+ +HP
Sbjct: 702 HYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTL 761
Query: 407 INEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIR 466
++ + L ERM +GY PDT VLHD+EE +K +L YHSE+LAI FG++ TP G TIR
Sbjct: 762 VHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIR 821
Query: 467 IIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KNLRVC DCH A KFIS++V REI++RD RFHHF DG CSCGDYW
Sbjct: 822 VAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 184/350 (52%), Gaps = 16/350 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MP D V++N++I L + AL+ +R M SFTL SVL + + ++
Sbjct: 122 MPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRL 181
Query: 60 GKEIHGYAIRHG-LDANVCIG-SSLINMYAKCARVEDSHRLFCLLPVKDA-----ISWNS 112
G+E H +A+++G LD + ++L++MYA+ V+D+ LF + D+ ++WN+
Sbjct: 182 GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNT 241
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
+++ VQ+G E ++ M+ ++P ++F+S +PAC+ L L LG+++H ++++
Sbjct: 242 MVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDS 301
Query: 173 -FDDNMFIASSLLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAIS 229
N F+AS+L+DMYA + +AR +FD + + W A++ G A G +A+
Sbjct: 302 DLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALE 361
Query: 230 LFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
LF +ME + GV P+ VL AC+ + + + K G+A + A+ DL
Sbjct: 362 LFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLK-RGMADNPFVQNALMDL 420
Query: 289 LGRAGKLQEAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKI 337
R G ++ A + + P + V W TL++ C V ++ A ++ ++
Sbjct: 421 YARLGDMEAARWIFAAIE--PRDVVSWNTLITGCVVQGHIHDAFQLVREM 468
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 17/282 (6%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIR----HGLDANVCIGSSLINMYAKCARVEDS 95
D F L A +I + IHG A+R HG + ++L+ YA+C + +
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGF--TPAVANALLTAYARCGDLTAA 115
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
LF +P +DA+++NS+IA + L R ML+ + S++ AC+HL
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHL 175
Query: 156 TT-LHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD----- 207
L LG++ H ++NGF D F ++LL MYA+ G + A+ +F +D D
Sbjct: 176 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGG 235
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+V+W ++ G +AI + M GV+P+ + F + L ACS ++
Sbjct: 236 VVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHA 295
Query: 268 SMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMH 306
+ KD +A + +A+ D+ R G + ++ + H
Sbjct: 296 YVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+P ++++WN +I+ +GL +EA+ + +M N KP+ T + L + V +
Sbjct: 556 LPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDR 615
Query: 60 GKEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAIS-WNSIIAG 116
G E+ H HG+ + + +++ + R+++++ + + P + +S W+S +
Sbjct: 616 GMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGA 675
Query: 117 C 117
C
Sbjct: 676 C 676
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 328/515 (63%), Gaps = 5/515 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVDVIK 59
P +W++VI A+N AL R+M N ++PD S F DV
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDV-- 144
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H A++ G +V +GSSL++MYAKC + D+ LF +P ++ +SW+ +I G Q
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E L F+Q LI + +FSS++ C+ T L LGK +HG ++ FD + F+
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFV 264
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+ +Y+KCG I A +FD++ ++ W ++++ A H + LFE+M G+
Sbjct: 265 GSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGM 324
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN ++F++VL ACSHAGL++K YF S+ +DYGI P EHYA++ DLLGRAGKLQEA
Sbjct: 325 KPNFISFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M PTE+VW LL+ CR+HK+ E+A VA++I +D ++ G +V+LSN YAAA
Sbjct: 384 SVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAG 443
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+++AA +R +R++G+KK SW+E NK + F AGD+SH + I E L+EL E ME
Sbjct: 444 RYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEME 503
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYV DT VL V+ E+K + YHSERLAI FG+I P G IR++KNLRVCGDCH
Sbjct: 504 KAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHA 563
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKF+SK R +IVRDN+RFH FEDGKCSCGDYW
Sbjct: 564 AIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 26/305 (8%)
Query: 30 RQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC 89
RQ+ N+ L SFT S L +G ++H + ++ GL + +LIN+Y+K
Sbjct: 26 RQICNLLL---SFTRSRSLR---------QGLQLHAHILKFGLQTIPLVSHNLINLYSKT 73
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
S ++F P K + +W+S+I+ QN L+FFR+ML ++P + S
Sbjct: 74 QLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSAT 133
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC L +GK +H ++ G+ ++F+ SSL+DMYAKCG I AR +FD+M ++V
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV 193
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW+ +I G A + +A++LF+Q + V N F +V+ CS + ++ +
Sbjct: 194 SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLE-----LGKL 248
Query: 270 TKDYGIAPSFEHY----AAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSACRV 323
+ SF+ +A+ L + G ++ AY+ + PT N +W ++L AC
Sbjct: 249 IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI---PTRNLGLWNSMLIACAQ 305
Query: 324 HKNVE 328
H + +
Sbjct: 306 HAHTQ 310
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 143/277 (51%), Gaps = 5/277 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G A+ EAL + +Q ++ + FT SSV+ + + + G
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG 246
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG ++ D++ +GS+LI++Y+KC +E ++++F +P ++ WNS++ C Q+
Sbjct: 247 KLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQH 306
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F +M +KP +SF S++ AC+H + G++ + G +
Sbjct: 307 AHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHY 366
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQ-MEKDG 238
+SL+D+ + G ++ A + +M + S W A++ G +H + A + ++ +E D
Sbjct: 367 ASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMD- 425
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+S V + A + AG ++A + M +D G+
Sbjct: 426 -SSSSGLHVLLSNAYAAAGRYEEA-ARMRKMLRDRGV 460
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 320/514 (62%), Gaps = 9/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+ +W ++ G +NG+ +EA I +M N + ++++ + + K
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN----EVSWNAMIAGYVQSQQIEKA 327
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ N ++++ YA+C ++ + LF +P +D ISW ++I+G Q+
Sbjct: 328 RELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQS 383
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M + + + +CA + L LGKQLHG +++ GF
Sbjct: 384 GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG 443
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MY KCG+I A +F+ + DIVSW +I G A HG +A++LFE M K +K
Sbjct: 444 NALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIK 502
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V V VL+ACSH GL+DK YFNSM ++YGI + +HY + DLLGRAG+L EA
Sbjct: 503 PDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALN 562
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M P W LL A R+H + EL K AEK+F ++P+N G YV+LSN YAA+ R
Sbjct: 563 LMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGR 622
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ +R MR+KG+KK P SW+E++NK + F GD SHP RI L+EL +++
Sbjct: 623 WREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKK 682
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+G+V TK VLHDVEEE+K+++L YHSE+LA+ FGI+ P G IR+IKNLRVC DCH A
Sbjct: 683 DGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNA 742
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKI QR+IIVRD++RFHHF +G CSCGDYW
Sbjct: 743 IKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 50/384 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN ++ G A+NG EEA I QM L + + + +L + +
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + +D + + L+ Y + R++D+ LF +PV+D ISWN +I G QN
Sbjct: 204 RRL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259
Query: 121 GLFDEGLKFFRQMLIAKI---------------------------KPRHVSFSSIMPACA 153
GL E + F ++ I + + VS+++++
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYV 319
Query: 154 HLTTLHLGKQLHGCIIRNGFDD----NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
+ ++L FD N ++++ YA+CGNI A+ +FD+M D +
Sbjct: 320 QSQQIEKAREL--------FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW A+I G A G + +A+ LF +M++DG N A L++C+ ++ +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K G + A+ + G+ G ++EA++ ++ + W T+++ H +
Sbjct: 432 VK-AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS-WNTMIAGYARHGFGKE 489
Query: 330 AGKVAEKIFM-IDPNNMGAYVILS 352
A + E + M I P+++ +LS
Sbjct: 490 ALALFESMKMTIKPDDVTLVGVLS 513
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 171/374 (45%), Gaps = 33/374 (8%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
SD+V WN I R G E AL++ M + + +S L + D + K
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLS--NNKFDCAR-KVF 114
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
R + NV +++ Y K + + LF +P KD +SWN++++G QNG
Sbjct: 115 EKMPDRDLISWNV-----MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E K F QML+ +S++ ++ A + ++L + D + + L
Sbjct: 170 EEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCL 221
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ Y + + AR +FD+M + D +SW +I G A +G +A LFE++ V
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV---- 277
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
A+ A+++ G++D+A F M + ++ + A +A + ++ ++++A E
Sbjct: 278 FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN----AMIAGYV-QSQQIEKARELFD 332
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
M P+ N W T+++ N++ A + +++ D + A + + YA + +
Sbjct: 333 QM---PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI---SGYAQSGQS 386
Query: 362 KDAASLRVFMRNKG 375
++A L + M+ G
Sbjct: 387 EEALHLFIKMKRDG 400
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/549 (41%), Positives = 329/549 (59%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN++I G +NG +EAL + +QM +KPD F+LSS+L D KG
Sbjct: 540 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 599
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA------------------------------ 90
+E+H + +R+ ++ + L++MYAKC
Sbjct: 600 RELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNS 659
Query: 91 -RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
R D+ LF + ++ WNSI+AG GL E F +ML + I+ ++ +I+
Sbjct: 660 GRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 719
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
C+ L L G QLH II+ GF + ++ + ++L+DMY+KCG I AR +FD M+ +I
Sbjct: 720 NLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI 779
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSW A+I G + HG + +A+ L+E+M K G+ PN V F+A+L+ACSH GL+++ F S
Sbjct: 780 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 839
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M +DY I EHY + DLLGRAG+L++A EF+ M P + W LL ACRVHK+++
Sbjct: 840 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMD 899
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+ A+++F +DP N G YVI+SN YAAA RWK+ +R M+ KG+KK P SWIE+
Sbjct: 900 MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 959
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY--- 445
++ F AG K+HP I L+ L + + GY+PDT +L +V++ +++ Y
Sbjct: 960 SEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQ 1019
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSERLA+ G+I P +TIR+ KNLR+CGDCHTA KFISKI R II RD +RFHHFE+
Sbjct: 1020 HSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFEN 1079
Query: 506 GKCSCGDYW 514
GKCSCGDYW
Sbjct: 1080 GKCSCGDYW 1088
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 155/264 (58%), Gaps = 5/264 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
VS+N ++ G + G EEAL + M + + ++PD FT +++L + A+ + +G++IH
Sbjct: 444 VSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 503
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ IR + N+ + + L++MY++C R+ + +F + ++A SWNS+I G QNG E
Sbjct: 504 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 563
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L+ F+QM + IKP S SS++ +C L+ G++LH I+RN ++ + L+D
Sbjct: 564 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 623
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG++ A ++D+ D++ ++ G A+DA +LF+QME + N+
Sbjct: 624 MYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME----QRNTAL 679
Query: 246 FVAVLTACSHAGLIDKAWSYFNSM 269
+ ++L ++ GL +++++F M
Sbjct: 680 WNSILAGYANKGLKKESFNHFLEM 703
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 143/253 (56%), Gaps = 1/253 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+ +V+WN VI G + +EEA I +M + + PD+FT +S L + GK++
Sbjct: 239 TSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQV 298
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H I G + +G++LI+MYAKC E ++F + ++ ++WNSII+ Q G F
Sbjct: 299 HSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF 358
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ L F +M + K + SI+ A A L + G++LHG ++RN + ++ + S+L
Sbjct: 359 NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSAL 418
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVKPN 242
+DMY+KCG + A +F + + VS+ A++ G G A +A+ L+ M+ +DG++P+
Sbjct: 419 VDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPD 478
Query: 243 SVAFVAVLTACSH 255
F +LT C++
Sbjct: 479 QFTFTTLLTLCAN 491
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 167/335 (49%), Gaps = 13/335 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L +WNT+I+ AR Y E L + +M D FT SV+ D+
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++ ++ GL+ N+ +G +L++ YA+ ++D+ + ++WN++IAG V+
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKI 254
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++E F +ML + P + +F+S + C L + GKQ+H +I GF + F+
Sbjct: 255 LSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVG 314
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKC + +FD+M + V+W ++I A G+ +DA+ LF +M++ G K
Sbjct: 315 NALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYK 374
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N ++L A + I K + ++ + +A+ D+ + G ++EA++
Sbjct: 375 SNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVEEAHQ 433
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
V+ +LL V N LAG V E
Sbjct: 434 ------------VFRSLLERNEVSYNALLAGYVQE 456
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 34 NVNLKPDS----FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC 89
+++ KP S SS++ D +GK IH I +G + + + + ++ +YA+
Sbjct: 60 SIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS 119
Query: 90 ARVED---SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
++D + +LF +P ++ +WN++I + + E L+ + +M + +F
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFP 179
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ AC + + +QL +++ G + N+F+ +L+D YA+ G + A D+++
Sbjct: 180 SVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGT 239
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+V+W AVI G + +A +F++M K GV P++ F + L C
Sbjct: 240 SVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC 286
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/528 (41%), Positives = 336/528 (63%), Gaps = 18/528 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++W+ VI G A+ G +EAL+ +QM +P+S T+ S+L A + +G EIH
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418
Query: 65 GYAIRHGL------------DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISW 110
Y+++ L ++ + ++LI+MY+KC + + +F +P ++ ++W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
+I G Q G ++ LK F +M+ + P + S I+ ACAHL L +GKQ+H +
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538
Query: 169 IRN-GFDDNM-FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
R+ ++ ++ F+A+ L+DMY+KCG++ AR +FD M + VSWT+++ G +HG +
Sbjct: 539 TRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKE 598
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA 286
A+ +F++M+K G P+ ++F+ +L ACSH+G++D+ +YF+ M +DY + S EHYA V
Sbjct: 599 ALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVI 658
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMG 346
DLL R G+L +A++ I M P+ +W+ LLSACRVH NVELA K+ + N G
Sbjct: 659 DLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDG 718
Query: 347 AYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHR 406
+Y ++SN YA ARRWKD A +R M+ G+KK P CSW++ K +F GD+SHP
Sbjct: 719 SYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPE 778
Query: 407 INEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIR 466
I L+ L+ R++ GYVP+T LHDV++E+K NLL HSE+LA+ +G++ T G IR
Sbjct: 779 IYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIR 838
Query: 467 IIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I KNLRVCGDCH+A +ISKIV EIIVRD+SRFHHF++G CSCG YW
Sbjct: 839 ITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 159/323 (49%), Gaps = 14/323 (4%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S V WN ++ + G + A+ + +M KPD FTL L + G+ +
Sbjct: 112 SPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRAL 171
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK---DAISWNSIIAGCVQN 120
HG +G ++NV + ++L+ MY++C +ED+ +F + K D ISWNSI+A V+
Sbjct: 172 HGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKG 231
Query: 121 GLFDEGLKFFRQM-LIAKIKPRH-----VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
L+ F +M +I K + +S +I+PACA L L K++H IRNG
Sbjct: 232 SNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTF 291
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ F+ ++L+D YAKCG++ A +F+ M+ D+VSW A++ G GN A LFE M
Sbjct: 292 ADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENM 351
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ + + + + AV+ + G +A F M D G P+ ++ G
Sbjct: 352 RKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILD-GSEPNSVTIISLLSACASLGA 410
Query: 295 LQEAYEFISNMHAGPTENVWLTL 317
L + E +HA + L+L
Sbjct: 411 LSQGME----IHAYSLKKCLLSL 429
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 115/237 (48%), Gaps = 10/237 (4%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+G+ ++ Y C +D+ + + A+ WN ++ ++ G D + +ML A
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
KP H + + AC L + G+ LHG I NGF+ N+F+ ++L+ MY++CG++ A
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 198 CIFDKMD---LHDIVSWTAVIMGNALHGNAHDAISLFEQM------EKDGVKPNSVAFVA 248
+FD++ + D++SW +++ + N A+ LF +M + + + ++ V
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+L AC+ + + + ++ A +F A + D + G + +A + + M
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALI-DTYAKCGSMNDAVKVFNVM 320
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTL---------SSVLPIF 51
MP + VSW +++ G +G +EAL+I +M PD + S ++
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 52 ADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISW 110
+Y D+++ Y + + C+ I++ A+C R++ + + +P++ A+ W
Sbjct: 635 LNYFDIMR----RDYDVVASAEHYACV----IDLLARCGRLDKAWKTIQEMPMEPSAVIW 686
Query: 111 NSIIAGC 117
++++ C
Sbjct: 687 VALLSAC 693
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 315/514 (61%), Gaps = 10/514 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD-VIKG 60
P+ D+ +W ++ G +NG+ +EA +M N + +++L + Y VI G
Sbjct: 259 PIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKN----EISYNAMLAGYVQYKKMVIAG 314
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ R N+ +++I Y + + + +LF ++P +D +SW +II+G QN
Sbjct: 315 ELFEAMPCR-----NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQN 369
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E L F +M +FS + CA + L LGKQ+HG +++ GF+ F+
Sbjct: 370 GHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVG 429
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MY KCG+ A +F+ ++ D+VSW +I G A HG A+ LFE M+K GVK
Sbjct: 430 NALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVK 489
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + V VL+ACSH+GLID+ YF SM +DY + P+ +HY + DLLGRAG+L+EA
Sbjct: 490 PDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAEN 549
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ NM P W LL A R+H N EL K AE +F ++P N G YV+LSN YAA+ R
Sbjct: 550 LMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGR 609
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D +R MR G++K SW+EV+NK + F GD HP RI L+EL +M +
Sbjct: 610 WVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRR 669
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYV TK VLHDVEEE+K+++L YHSE+LA+ FGI+ P G IR++KNLRVC DCH A
Sbjct: 670 EGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNA 729
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R II+RD+ RFHHF +G CSCGDYW
Sbjct: 730 IKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 8/229 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G A+NG YEEALN+ +M + T S L AD + G
Sbjct: 351 MPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG ++ G + +G++L+ MY KC ++++ +F + KD +SWN++IAG ++
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH 470
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F M A +KP ++ ++ AC+H + G + + R D N+
Sbjct: 471 GFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR---DYNVKPT 527
Query: 181 SS----LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
S ++D+ + G + A + M SW A++ + +HGN
Sbjct: 528 SKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNT 576
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 47/285 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN ++ G A+NG +EA + +M + N S + + +L A YV +
Sbjct: 134 MPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRN----SISWNGLL---AAYVHNGRL 186
Query: 61 KE-------------------IHGYAIRHGL-DA----------NVCIGSSLINMYAKCA 90
KE + GY R+ L DA +V +++I+ YA+
Sbjct: 187 KEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVG 246
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
+ + RLF P++D +W ++++G VQNG+ DE K+F +M + +S+++++
Sbjct: 247 DLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKN----EISYNAMLA 302
Query: 151 ACAHLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
+ + +L + RN N I Y + G I AR +FD M D V
Sbjct: 303 GYVQYKKMVIAGELFEAMPCRNISSWNTMITG-----YGQNGGIAQARKLFDMMPQRDCV 357
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
SW A+I G A +G+ +A+++F +M++DG N F L+ C+
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCA 402
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 168/378 (44%), Gaps = 43/378 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG-----NVNLKPDSFTLSSVLPIFADYVDVIK 59
D+V+WN I RNG + AL + M + N + ++ + D D +
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+++ + + ++ Y + R+ ++H+LF L+P KD +SWN++++G Q
Sbjct: 105 ERDLFSWNV-------------MLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQ 151
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG DE + F +M +S++ ++ A H L ++L + + +
Sbjct: 152 NGFVDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARRL----FESQSNWELIS 203
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ Y K + AR +FD+M + D++SW +I G A G+ A LF + V
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV 263
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ A+++ G++D+A YF+ M I+ Y A+ + K+ A
Sbjct: 264 ----FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS-----YNAMLAGYVQYKKMVIAG 314
Query: 300 EFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
E M P N+ W T+++ + + A K+ + M+ + ++ + + YA
Sbjct: 315 ELFEAM---PCRNISSWNTMITGYGQNGGIAQARKLFD---MMPQRDCVSWAAIISGYAQ 368
Query: 358 ARRWKDAASLRVFMRNKG 375
+++A ++ V M+ G
Sbjct: 369 NGHYEEALNMFVEMKRDG 386
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/517 (42%), Positives = 336/517 (64%), Gaps = 4/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I ++ G EALN+ +M + +P+ FT +++L + G
Sbjct: 123 MPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 182
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI+ ++++ +GSSL++MYAK R+ D+H +F LP +D ++ +II+G Q
Sbjct: 183 RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM 242
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E LK FRQ+ I + V+++S++ A + L L+ GKQ+H ++R+G + +
Sbjct: 243 GLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 302
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ AR IFD M +SW A+++G + HG A + + LF+ M E++ V
Sbjct: 303 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKV 362
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMT--KDYGIAPSFEHYAAVADLLGRAGKLQE 297
KP+S+ ++AVL+ CSH L D F +M KD GI P HY V DLLGRAG+++E
Sbjct: 363 KPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD-GIEPDIGHYGCVVDLLGRAGRVEE 421
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A++FI M PT +W +LL +CRVH +VE+ V +K+ ++P N G YVILSN YA+
Sbjct: 422 AFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYAS 481
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A +W+D ++R M+ K + K P SW+E+ + F A D +HP + +KEL +
Sbjct: 482 AGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIK 541
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++GYVPD VL+DV+EEQK+ +L HSE+LA+ FG+I TP+GTTIR+IKNLR+C DC
Sbjct: 542 FKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDC 601
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+ KF+S++ R +I+RD +RFH+ G CSCGDYW
Sbjct: 602 HSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 114/196 (58%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ +H + I+ +V + + LI +Y KC + D+ +F +P ++ +SW ++I+
Sbjct: 80 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYS 139
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G E L F +ML + +P H +F++I+ +C G+Q+H I+ ++ +MF
Sbjct: 140 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 199
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSLLDMYAK G I A +F + D+V+ TA+I G A G +A+ LF Q++ +G
Sbjct: 200 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 259
Query: 239 VKPNSVAFVAVLTACS 254
+ NSV + +VLTA S
Sbjct: 260 MNSNSVTYASVLTALS 275
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 69/122 (56%)
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
QM I + + + SI+ C + G+++H +I+ + ++++ + L+ +Y KC
Sbjct: 52 QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 111
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ AR +FD+M ++VSWTA+I + G A +A++LF +M + +PN F +LT
Sbjct: 112 CLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 171
Query: 252 AC 253
+C
Sbjct: 172 SC 173
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 326/515 (63%), Gaps = 6/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I + + L +AL+ + M ++P+ +T SSVL +++
Sbjct: 77 MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL--- 133
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ GL+++V + S+LI+ Y+K D+ +F + D + WNSII G QN
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
DE L +++M A + +S++ AC L L LG+Q+H +++ +D ++ +
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 251
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++LLDMY KCG++ A +F +M D++SW+ +I G A +G + DA+ LFE M+ G
Sbjct: 252 NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + + VL ACSHAGL++ W YF SM + +GI P EHY + DLLGRAGKL EA
Sbjct: 312 KPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAV 371
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I M+ P W LL ACRVHKNV+LA A++I +DP + G Y++LSN YA ++
Sbjct: 372 KLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQ 431
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D A +R MR +G+KK P CSWIEV + +AF+ GD SHP I L +L++R+
Sbjct: 432 KWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLM 491
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPDT VL D+E EQ ++ L YHSE+LAIVFG++ P+ TI I KNLR+CGDCH
Sbjct: 492 RLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHI 551
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S++ R I++RD R+HHF G CSCGDYW
Sbjct: 552 FAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
L D+ T S ++ V + + +H + +G + + ++LINMY K ++++
Sbjct: 12 LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
LF +P ++ +SW ++I+ + L + L F ML ++P ++SS++ AC L
Sbjct: 72 NLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLL 131
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L +QLHG I++ G + ++F+ S+L+D Y+K G A +F++M D+V W ++I
Sbjct: 132 NL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIG 188
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS-YFNSMTKDYGI 275
G A + + + + L+++M++ + +VL AC+ L++ + + + D +
Sbjct: 189 GFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDL 248
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ A+ D+ + G L++A + M W T+++
Sbjct: 249 ILN----NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 317/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW+ +I +G +AL++ R M + + PD TL+S+L +D ++ G
Sbjct: 192 MEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMG 251
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + GLD + + ++L++MY KC +ED+ LF +P +D ++W +I G +
Sbjct: 252 RLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAEC 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M + P V+ +++ ACA L +H + + I R F ++ +
Sbjct: 312 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DM+AKCG + AR IFD+M+ +++SW+A+I HG A+ LF M + G+
Sbjct: 372 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 431
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V++L ACSHAGL+++ +F+ M +DY + +HY V DLLGRAG+L EA +
Sbjct: 432 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M E +W L ACR HK+V LA K A + + P N G Y++LSN YA A R
Sbjct: 492 LIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A R M + +KK P +WIEV NK++ F GD +HP I E LK L ++E
Sbjct: 552 WEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLEL 611
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VLHDV+EE K +LY HSE+LAI FG+I TP+ T IRIIKNLRVCGDCHT
Sbjct: 612 VGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTF 671
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S I R IIVRD +RFHHF++G CSCGDYW
Sbjct: 672 CKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 177/330 (53%), Gaps = 14/330 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV+W +I G A G E+L + +M + PD + +V+ A + K
Sbjct: 91 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y R +V +G+++I+MYAKC VE + +F + K+ ISW+++IA +
Sbjct: 151 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L FR ML + + P ++ +S++ AC+ L L +G+ +H + + G D + F+
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KC I AR +FDKM D+V+WT +I G A GNA++++ LF++M ++GV
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE----HYAAVADLLGRAGKLQ 296
P+ VA V V+ AC+ G + KA + DY F+ A+ D+ + G ++
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKART-----IDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 385
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVH 324
A E M +NV W +++A H
Sbjct: 386 SAREIFDRME---EKNVISWSAMIAAYGYH 412
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 154/296 (52%), Gaps = 5/296 (1%)
Query: 12 VIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG 71
++ G A+ G Y R++ +PD++TL V+ D ++ G+ IH + G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
LD + + ++L++MY KC +ED+ LF + +D ++W +I G + G +E L F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
+M + P V+ +++ ACA L +H + + I R F ++ + ++++DMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ AR IFD+M+ +++SW+A+I HG A+ LF M G+ P+ + ++L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEFISNM 305
ACS + + + +G+ +H+ AA+ D+ G+ ++++A M
Sbjct: 241 ACSDLKNLQMG-RLIHHIVYKFGL--DLDHFVCAALVDMYGKCREIEDARFLFDKM 293
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/508 (43%), Positives = 324/508 (63%), Gaps = 1/508 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSWN +I G A NG EAL + ++M + ++ + L + + +G+ +H
Sbjct: 394 VSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHEL 453
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R GL++NV + ++LI MY KC R + + ++F L K +SWN++I GC QNG ++
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ F +M + +KP + SI+PA A ++ + +HG IR D ++++ ++L+DM
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG + +AR +F+ +++W A+I G HG+ A+ LFE+M+ G PN F
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
++VL+ACSHAGL+D+ YF+SM +DYG+ P EHY + DLLGRAGKL EA+ FI M
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +V+ +L AC++HKNVELA + A++IF ++P +V+L+N YA A WKD A
Sbjct: 694 MEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVAR 753
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M KG++KTP S +++KN+ + F +G +H I L +L+E ++ GYVPD
Sbjct: 754 VRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPD 813
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T + HDVE++ K LL HSE+LAI +G+I T GTTI+I KNLRVC DCH A K IS
Sbjct: 814 TDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISL 872
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ REII+RD RFHHF+DGKCSCGDYW
Sbjct: 873 VTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 44/360 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D V+WN ++ G ARNGL E A+ +V +M + +PD+ TL SVLP AD +
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+E+H +A+R G D V + ++++++Y KC V+ + ++F + ++++SWN++I G +
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAE 405
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L F++M+ + VS + + AC L L G+++H ++R G + N+ +
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNV 465
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY KC LA +FD++ VSW A+I+G +G++ DA+ LF +M+ + V
Sbjct: 466 MNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENV 525
Query: 240 KPNSVAFVAVLTAC-----------------------------------SHAGLIDKAWS 264
KP+S V+++ A + G + A S
Sbjct: 526 KPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARS 585
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWLTLLSAC 321
FNS + I + A+ G G + A E M + P E +L++LSAC
Sbjct: 586 LFNSARDRHVIT-----WNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSAC 640
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P T +S+L + A D+ G+ +H GL ++L NMYAKC R D+ R+
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTT 157
F +P +D ++WN+++AG +NGL + + +M +P V+ S++PACA
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQA 342
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L +++H +R GFD+ + +++++LD+Y KCG + AR +FD M + VSW A+I G
Sbjct: 343 LGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKG 402
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
A +G+A +A++LF++M +GV V+ +A L AC G +D+
Sbjct: 403 YAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/511 (41%), Positives = 317/511 (62%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN VI +N + EA+ + ++ +K + T +L ++ + KGK IH
Sbjct: 271 DVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIH 330
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G D + + ++L+++Y +C + ++F + KD I+W + QNG
Sbjct: 331 ELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRK 390
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F++M + +P + +++ CAHL L G+Q+H II N F M + ++L+
Sbjct: 391 EALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALI 450
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY KCG + A +F+KM DI+ W +++ A HG + + LF QM+ DGVK ++V
Sbjct: 451 NMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAV 510
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+FV+VL+A SH+G + + YF +M +D+ I P+ E Y V DLLGRAG++QEA + +
Sbjct: 511 SFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLK 570
Query: 305 MHAG-PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+ P +W+TLL ACR H + A AE++ DP++ GAYV+LSN YAAA W
Sbjct: 571 LSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDG 630
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R MR++G+KK P S IE+ N+ + F+ GD+SHP H I L L M GY
Sbjct: 631 VNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGY 690
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
+PDTK +LHDVE+E+K+++L+YHSERLAI FG+I TP GT +R+IKNLRVC DCHTA K+
Sbjct: 691 IPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKY 750
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ REI+VRD RFH+F+DG+CSC DYW
Sbjct: 751 ISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 1/268 (0%)
Query: 38 KPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR 97
KPD+ ++L + +V G+ +H + G + N + LI MYA+C V ++ +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +L KD +W +I Q G +D L F QM + P V++ +I+ ACA +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G ++HG I++ GF+ ++F+ ++L++MY KCG++R A F +++ D+VSWTA+I
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
H A L+ +M+ DGV PN + V A + + + + +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-KFVYGLVSSGVMES 239
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ ++ G AG L +A +M
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDM 267
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 163/321 (50%), Gaps = 4/321 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW +I ++ + A + R+M + P+ TL +V + D + +GK ++
Sbjct: 170 DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVY 229
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++++V + +S +NM+ + D+ RLF + +D ++WN +I VQN F
Sbjct: 230 GLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG 289
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F ++ +K ++F ++ LT+L GK +H + G+D + +A++L+
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y +C A IF M D+++WT + + A +G +A+ LF++M+ +G +P S
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKD-YGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
VAVL C+H + K + + ++ + + E A+ ++ G+ GK+ EA
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFE 467
Query: 304 NMHAGPTENVWLTLLSACRVH 324
M A VW ++L A H
Sbjct: 468 KM-AKRDILVWNSMLGAYAQH 487
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ +W +I + G Y+ AL + QM ++ P T ++L A + G EIH
Sbjct: 69 DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 128
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G + +V +G++LINMY KC V + F L +D +SW ++IA CVQ+ F
Sbjct: 129 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 188
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+R+M + + P ++ ++ A L GK ++G + + ++ + +S +
Sbjct: 189 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAV 248
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+M+ G + AR +F+ M D+V+W VI + N +A+ LF ++++DGVK N +
Sbjct: 249 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDI 308
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV +L + + K + + K+ G A+ L GR +A++ +
Sbjct: 309 TFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVD 367
Query: 305 M 305
M
Sbjct: 368 M 368
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 10/275 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+++W + V A+NG +EAL + ++M +P S TL +VL A + KG
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 427
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + I + + + ++LINMY KC ++ ++ +F + +D + WNS++ Q+
Sbjct: 428 RQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQH 487
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +DE L+ F QM + +K VSF S++ A +H ++ G Q ++++ +
Sbjct: 488 GYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL 547
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQ-MEK 236
++D+ + G I+ A I K+ L D + W ++ H A + EQ +E+
Sbjct: 548 YGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLER 607
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
D +S A+V + + AG W N M K
Sbjct: 608 D--PSHSGAYVVLSNVYAAAG----DWDGVNRMRK 636
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 327/515 (63%), Gaps = 5/515 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVDVIK 59
P +W++VI A+N AL R+M N ++PD S F DV
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDV-- 144
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H A++ G +V +GSSL++MYAKC + D+ LF +P ++ +SW+ +I G Q
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E L F+Q LI + +FSS++ C+ T L LGK +HG ++ FD + F+
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFV 264
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+ +Y+KCG I A +FD++ ++ W ++++ A H + LFE+M G+
Sbjct: 265 GSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGM 324
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + F++VL ACSHAGL++K YF S+ +DYGI P EHYA++ DLLGRAGKLQEA
Sbjct: 325 KPNFIXFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M PTE+VW LL+ CR+HK+ E+A VA++I +D ++ G +V+LSN YAAA
Sbjct: 384 SVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAG 443
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+++AA +R +R++G+KK SW+E NK + F AGD+SH + I E L+EL E ME
Sbjct: 444 RYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEME 503
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYV DT VL V+ E+K + YHSERLAI FG+I P G IR++KNLRVCGDCH
Sbjct: 504 KAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHA 563
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKF+SK R +IVRDN+RFH FEDGKCSCGDYW
Sbjct: 564 AIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 26/305 (8%)
Query: 30 RQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC 89
RQ+ N+ L SFT S L +G ++H + ++ GL + +LIN+Y+K
Sbjct: 26 RQICNLLL---SFTRSRSLR---------QGLQLHAHILKFGLQTIPLVSHNLINLYSKT 73
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
S ++F P K + +W+S+I+ QN L+FFR+ML ++P + S
Sbjct: 74 QLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSAT 133
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC L +GK +H ++ G+ ++F+ SSL+DMYAKCG I AR +FD+M ++V
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV 193
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW+ +I G A + +A++LF+Q + V N F +V+ CS + ++ +
Sbjct: 194 SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLE-----LGKL 248
Query: 270 TKDYGIAPSFEHY----AAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSACRV 323
+ SF+ +A+ L + G ++ AY+ + PT N +W ++L AC
Sbjct: 249 IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI---PTRNLGLWNSMLIACAQ 305
Query: 324 HKNVE 328
H + +
Sbjct: 306 HAHTQ 310
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 142/277 (51%), Gaps = 5/277 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G A+ EAL + +Q ++ + FT SSV+ + + + G
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG 246
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG ++ D++ +GS+LI++Y+KC +E ++++F +P ++ WNS++ C Q+
Sbjct: 247 KLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQH 306
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F +M +KP + F S++ AC+H + G++ + G +
Sbjct: 307 AHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHY 366
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQ-MEKDG 238
+SL+D+ + G ++ A + +M + S W A++ G +H + A + ++ +E D
Sbjct: 367 ASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMD- 425
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+S V + A + AG ++A + M +D G+
Sbjct: 426 -SSSSGLHVLLSNAYAAAGRYEEA-ARMRKMLRDRGV 460
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 328/514 (63%), Gaps = 6/514 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ ++VSW +I G +N EEA+ + +M ++P+ FT S +L VI E
Sbjct: 363 LGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISPSE 418
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H ++ + + +G++L++ Y K +V+++ ++F + KD ++W++++AG Q G
Sbjct: 419 VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGE 478
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +K F ++ +KP +FSSI+ CA T ++ GKQ HG I++ D ++ ++S
Sbjct: 479 TEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSS 538
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MYAK G+I A +F + D+VSW ++I G A HG A A+ +F++M+K VK
Sbjct: 539 ALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 598
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+SV F+ V AC+HAGL+++ YF+ M +D IAP+ EH + + DL RAG+L++A +
Sbjct: 599 DSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 658
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I NM +W T+L+ACRVHK EL AEKI + P + AYV+LSN YA + W
Sbjct: 659 IDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDW 718
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
++ A +R M + +KK P SWIEVKNK YAF+AGD+SHP +I L++L R++
Sbjct: 719 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDL 778
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VL D+++E K+ +L HSERLAI FG+I TP G+ + IIKNLRVCGDCH I
Sbjct: 779 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVI 838
Query: 482 KFISKIVQREIIVRDNSRFHHF-EDGKCSCGDYW 514
K I+KI +REI+VRD++RFHHF DG CSCGD+W
Sbjct: 839 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 146/253 (57%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++V+W T+I G ARN L EE L + +M + +P+SFT ++ L + A+ +G
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +++GLD + + +SLIN+Y KC V + LF VK ++WNS+I+G N
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L F M + ++ SF+SI+ CA+L L +QLH +++ GF + I
Sbjct: 278 GLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 181 SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+KC + A +F + L ++VSWTA+I G + +A+ LF +M++ GV
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGV 397
Query: 240 KPNSVAFVAVLTA 252
+PN + +LTA
Sbjct: 398 RPNEFTYSVILTA 410
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 145/254 (57%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D S+ +++ G +R+G +EA + + ++ ++ D SSVL + A D + G+
Sbjct: 58 PDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGR 117
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H I+ G +V +G+SL++ Y K + +D +F + ++ ++W ++I+G +N
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNS 177
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L +E L F +M +P +F++ + A G Q+H +++NG D + +++
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 237
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+++Y KCGN+R AR +FDK ++ +V+W ++I G A +G +A+ +F M + V+
Sbjct: 238 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRL 297
Query: 242 NSVAFVAVLTACSH 255
+ +F +++ C++
Sbjct: 298 SESSFASIIKLCAN 311
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%)
Query: 87 AKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
A +R+ +H LF P +D S+ S++ G ++G E + F + ++ FS
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ A L G+QLH I+ GF D++ + +SL+D Y K N + R +FD+M
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
++V+WT +I G A + + ++LF +M+ +G +PNS F A L + G+
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGV 213
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/517 (42%), Positives = 327/517 (63%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DL+SWN++I N A+ + ++M ++PD TL S+ I + ++
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRAC 367
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + G+ +R G ++ IG++++ MYAK V+ + +F LP KD ISWN+II+G Q
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQ 427
Query: 120 NGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
NG E ++ + M +I ++ S++PAC+ L G +LHG +++NG ++
Sbjct: 428 NGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 487
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ +SL DMY KCG + A +F ++ + V W +I + HG+ A+ LF++M +
Sbjct: 488 FVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 547
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GVKP+ + FV +L+ACSH+GL+D+ F M DYGI PS +HY + DL GRAG+L+
Sbjct: 548 GVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEI 607
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A FI +M P ++W LLSACRVH NV+L +E +F ++P ++G +V+LSN YA+
Sbjct: 608 ALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 667
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A +W+ +R KG++KTP S +EV NK F G+++HP Y + L L E+
Sbjct: 668 AGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEK 727
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GYVPD + VL DVE+++K+++L HSERLA+ F +I TP TTIRI KNLRVCGDC
Sbjct: 728 LKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDC 787
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+ KFISKI +REIIVRD++RFHHF++G CSCGDYW
Sbjct: 788 HSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 195/362 (53%), Gaps = 21/362 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNI---VRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP D+ SWN +I G ++G +EAL + +R M DS T+ S+L + D
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM-------DSVTVVSLLSACTEAGDF 263
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G IH Y+I+HGL++ + + + LI++YA+ ++D ++F + V+D ISWNSII
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDN 176
N + F++M +++I+P ++ S+ + L + + + G +R G F ++
Sbjct: 324 ELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLED 383
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ I ++++ MYAK G + AR +F+ + D++SW +I G A +G A +AI ++ ME+
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 237 DG--VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+G + N +V+VL ACS AG + + + K+ G+ ++AD+ G+ G+
Sbjct: 444 EGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMYGKCGR 502
Query: 295 LQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVI 350
L +A +S + P N W TL++ H + E A + +++ + P+++ +
Sbjct: 503 LDDA---LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 559
Query: 351 LS 352
LS
Sbjct: 560 LS 561
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
+S + V +F ++ K +H + NVCI + L+N+Y V + F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTF 109
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ-MLIAKIKPRHVSFSSIMPACAHLTTL 158
+ +D +WN +I+G + G E ++ F ML + ++P + +F S++ AC ++T
Sbjct: 110 DHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD- 168
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G ++H ++ GF ++++A+SL+ +Y + G + AR +FD+M D+ SW A+I G
Sbjct: 169 --GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGY 226
Query: 219 ALHGNAHDAISLFEQMEKDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
GNA +A++L DG++ +SV V++L+AC+ AG ++ + +S + +G+
Sbjct: 227 CQSGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLES 280
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ DL G L++ + M+
Sbjct: 281 ELFVSNKLIDLYAEFGSLKDCQKVFDRMY 309
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/549 (42%), Positives = 334/549 (60%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
M +VSWN +I G +NGL + AL R + +++PD FT++SVL A+ +
Sbjct: 255 MEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKM 314
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--------------------- 98
GK++H Y +R G+ + I ++LI+ YAK VE + R+
Sbjct: 315 GKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGY 374
Query: 99 ------------FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
F ++ +D I+W ++I G QNG DE ++ FR M+ + +P + +
Sbjct: 375 VKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLA 434
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ ACA L L GKQ+H IR+ + ++ ++++++ +YA+ G++ LAR +FD++
Sbjct: 435 AVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR 494
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ V+WT++I+ A HG AI LFE+M + GVKP+ V ++ V +AC+HAG IDK Y
Sbjct: 495 KETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRY 554
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+ M ++GI P HYA + DLL RAG L EA+EFI M P VW +LL+ACRV K
Sbjct: 555 YEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRK 614
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N +LA AEK+ IDP+N GAY L+N Y+A RW DAA + ++K +KK SW
Sbjct: 615 NADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWT 674
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
V++K + F A D HP I + E+ E +++ G+VPD VLHDV++E K+ LL
Sbjct: 675 HVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSR 734
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TP+ TT+RI+KNLRVC DCHTAIKFISK+V REIIVRD +RFHHF D
Sbjct: 735 HSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRD 794
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 795 GYCSCKDYW 803
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 153/319 (47%), Gaps = 65/319 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++VGL R G + +A+ M L P F L++VL A G
Sbjct: 123 MPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIG 182
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
+++H + I+ GL + V + +S++ MY KC E + +F + V+
Sbjct: 183 RKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQ 242
Query: 108 ------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSI 148
+SWN+IIAG QNGL D LKFF +ML A ++P + +S+
Sbjct: 243 GRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSV 302
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGF---------------------------------DD 175
+ ACA+L L +GKQ+H I+R G D
Sbjct: 303 LSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADL 362
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ ++LL+ Y K G+ + AR +FD M+ D+++WTA+I+G +G +A+ LF M
Sbjct: 363 NVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMI 422
Query: 236 KDGVKPNSVAFVAVLTACS 254
+ G +PNS AVL+AC+
Sbjct: 423 RSGPEPNSHTLAAVLSACA 441
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 148/303 (48%), Gaps = 22/303 (7%)
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
YA R+ N SL++MYAK R+ D+ +F +P +DA+SW ++ G + G F +
Sbjct: 92 YARRNAFTWN-----SLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWD 146
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+K F M+ + P ++++ +CA +G+++H +I+ G + +A+S+L
Sbjct: 147 AVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLY 206
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG+ AR +F++M + SW A++ G A+S+FE ME+ + V+
Sbjct: 207 MYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VS 262
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS----FEHYAAVADL-LGRAGKLQEAYE 300
+ A++ + GL D A +F+ M + P +A A+L + + GK +Y
Sbjct: 263 WNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYI 322
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMG------AYVILSNT 354
+ M + + L+S +VE A ++ +K + D N + YV L +T
Sbjct: 323 LRTGMPY--SSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDT 380
Query: 355 YAA 357
A
Sbjct: 381 KQA 383
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 319/514 (62%), Gaps = 9/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+ +W ++ G +NG+ +EA I +M N + ++++ + + K
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN----EVSWNAMIAGYVQSQQIEKA 327
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ N ++++ YA+C ++ + LF +P +D ISW ++I+G Q+
Sbjct: 328 RELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQS 383
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M + + + +CA + L LGKQLHG +++ GF
Sbjct: 384 GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG 443
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MY KCG+I A +F+ + DIVSW +I G A HG +A++LFE M K +K
Sbjct: 444 NALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIK 502
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V V VL+ACSH G +DK YFNSM ++YGI + +HY + DLLGRAG+L EA
Sbjct: 503 PDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALN 562
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M P W LL A R+H + EL K AEK+F ++P+N G YV+LSN YAA+ R
Sbjct: 563 LMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGR 622
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ +R MR+KG+KK P SW+E++NK + F GD SHP RI L+EL +++
Sbjct: 623 WREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKK 682
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+G+V TK VLHDVEEE+K+++L YHSE+LA+ FGI+ P G IR+IKNLRVC DCH A
Sbjct: 683 DGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNA 742
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKI QR+IIVRD++RFHHF +G CSCGDYW
Sbjct: 743 IKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 50/384 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN ++ G A+NG EEA I QM L + + + +L + +
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + +D + + L+ Y + R++D+ LF +PV+D ISWN +I G QN
Sbjct: 204 RRL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259
Query: 121 GLFDEGLKFFRQMLIAKI---------------------------KPRHVSFSSIMPACA 153
GL E + F ++ I + + VS+++++
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYV 319
Query: 154 HLTTLHLGKQLHGCIIRNGFDD----NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
+ ++L FD N ++++ YA+CGNI A+ +FD+M D +
Sbjct: 320 QSQQIEKAREL--------FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW A+I G A G + +A+ LF +M++DG N A L++C+ ++ +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K G + A+ + G+ G ++EA++ ++ + W T+++ H +
Sbjct: 432 VK-AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS-WNTMIAGYARHGFGKE 489
Query: 330 AGKVAEKIFM-IDPNNMGAYVILS 352
A + E + M I P+++ +LS
Sbjct: 490 ALALFESMKMTIKPDDVTLVGVLS 513
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 171/374 (45%), Gaps = 33/374 (8%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
SD+V WN I R G E AL++ M + + +S L + D + K
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLS--NNKFDCAR-KVF 114
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
R + NV +++ Y K + + LF +P KD +SWN++++G QNG
Sbjct: 115 EKMPDRDLISWNV-----MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E K F QML+ +S++ ++ A + ++L + D + + L
Sbjct: 170 EEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCL 221
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ Y + + AR +FD+M + D +SW +I G A +G +A LFE++ V
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV---- 277
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
A+ A+++ G++D+A F M + ++ + A +A + ++ ++++A E
Sbjct: 278 FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN----AMIAGYV-QSQQIEKARELFD 332
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
M P+ N W T+++ N++ A + +++ D + A + + YA + +
Sbjct: 333 QM---PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI---SGYAQSGQS 386
Query: 362 KDAASLRVFMRNKG 375
++A L + M+ G
Sbjct: 387 EEALHLFIKMKRDG 400
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/510 (41%), Positives = 325/510 (63%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++WNT+I G +G EEA +M + PD T ++VL A + +GKEIH
Sbjct: 295 DVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIH 354
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A + GL ++V G++LINMY+K ++D+ ++F +P +D +SW +++
Sbjct: 355 ARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVV 414
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E F+QML +K +++ ++ AC++ L GK++H +++ G ++ + ++L+
Sbjct: 415 ESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALM 474
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY KCG++ A +F+ M + D+V+W +I G +G +A+ +E M+ +G++PN+
Sbjct: 475 SMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAA 534
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL+AC L+++ F M+KDYGI P+ +HYA + D+L RAG L+EA + I
Sbjct: 535 TFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILT 594
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ P+ +W LL+ACR+H NVE+ + AE ++P N G YV LS YAAA W+D
Sbjct: 595 IPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDV 654
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR FM+ +G+KK P SWIE+ + ++FVA D+SHP I L+ L ++M+ GYV
Sbjct: 655 AKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYV 714
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ V+HD+++E K+ + +HSE+LAI +G+I TP GT IRI KNLRVC DCHTA KFI
Sbjct: 715 PDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFI 774
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +REII RD RFHHF++G+CSCGDYW
Sbjct: 775 SKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 169/315 (53%), Gaps = 6/315 (1%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSWN +I G A GL +EA N+ M L+PD FT S+L + + G+EIH
Sbjct: 94 VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ GL + +G++LI+MYAKC V D+ R+F + +D +SW ++ ++G +E
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
LK + ML +++P +++ +++ AC L L GKQ+H I+ + + ++ ++++L
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG + AR +F+ + D+++W +I G G +A F +M ++GV P+
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ VL+AC+ G + + KD G+ A+ ++ +AG +++A + M
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRM 392
Query: 306 HAGPTENV--WLTLL 318
P +V W TLL
Sbjct: 393 ---PKRDVVSWTTLL 404
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 175/362 (48%), Gaps = 35/362 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSW T+ A +G EE+L M ++P T +VL + KG
Sbjct: 190 MASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + + ++V + ++L MY KC +D+ +F L +D I+WN++I G V +
Sbjct: 250 KQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E F +ML + P ++++++ ACA L GK++H ++G ++
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFG 369
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+K G+++ AR +FD+M D+VSWT ++ A ++ + F+QM + GVK
Sbjct: 370 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429
Query: 241 PNSVAFVAVLTACSH----------------AGLIDKAWSYFNSMTKDYGIAPSFEH--- 281
N + ++ VL ACS+ AGL+ + N++ Y S E
Sbjct: 430 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD-LAVTNALMSMYFKCGSVEDAIR 488
Query: 282 ------------YAAVADLLGRAGKLQEA---YEFISNMHAGPTENVWLTLLSACRVHKN 326
+ + LG+ G+ EA YE + + P ++ +LSACRV
Sbjct: 489 VFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNL 548
Query: 327 VE 328
VE
Sbjct: 549 VE 550
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 192/409 (46%), Gaps = 46/409 (11%)
Query: 13 IVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL 72
++ ++G Y A ++++ + + DS+ +L D+ GK++H + +R G+
Sbjct: 1 MIPTGKDGWYAPA-DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGV 59
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
NV I ++L+ +YA C V ++ +LF K +SWN +I+G GL E F
Sbjct: 60 KPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTL 119
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M +++P +F SI+ AC+ L+ G+++H ++ G ++ + ++L+ MYAKCG+
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+R AR +FD M D VSWT + A G +++ + M ++ V+P+ + ++ VL+A
Sbjct: 180 VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSA 239
Query: 253 CS-----------HAGLIDKAW----SYFNSMTKDYGIAPSFEHYAAVADLLG------- 290
C HA +++ + ++TK Y +F+ V + L
Sbjct: 240 CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299
Query: 291 --------RAGKLQEAYEFISNM---HAGPTENVWLTLLSACR----VHKNVELAGKVAE 335
+G+L+EA+ M P + T+LSAC + + E+ + A+
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
+ D A + N Y+ A KDA +VF R M K SW
Sbjct: 360 DGLVSDVRFGNALI---NMYSKAGSMKDAR--QVFDR---MPKRDVVSW 400
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 133/277 (48%), Gaps = 4/277 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW T++ A E+ +QM +K + T VL ++ V + G
Sbjct: 392 MPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWG 451
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH ++ GL A++ + ++L++MY KC VED+ R+F + ++D ++WN++I G QN
Sbjct: 452 KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQN 511
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ + M ++P +F +++ AC + G++ + ++ G
Sbjct: 512 GRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKH 571
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ A+ G++R A + + L + W A++ +H N E K
Sbjct: 572 YACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLK-- 629
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
++P + L+A A + + + K+ G+
Sbjct: 630 LEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGV 666
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 324/513 (63%), Gaps = 5/513 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV++N +I G + NG+ E ++ + +++ +P+S TL +V+P+++ + + + +H
Sbjct: 277 DLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLH 336
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ ++ LDA+ + ++L +Y + +E + +F + K SWN++I+G QNGL +
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTE 396
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F+ M ++P ++ SS + ACAHL L LGK +H I + + N+++ ++L+
Sbjct: 397 MAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALI 456
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I AR IFD+MD ++VSW A+I G LHG +A+ L++ M + P S
Sbjct: 457 DMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSS 516
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++V+ ACSH GL+D+ F MT +Y I P EH + DLLGRAGKL EA E IS
Sbjct: 517 TFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISE 576
Query: 305 MHA---GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
GP VW LL AC VHKN +LA ++K+F +D N G YV+LSN Y + + +
Sbjct: 577 FPQSAIGP--GVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHY 634
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+AA +R + + + KTP C+ IE+ ++ + F+AGD HP I L+ L +M +
Sbjct: 635 SEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEA 694
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY P T+ L+DVEEE+K++++ HSE+LAI FG++ T GT IRIIKNLRVC DCH A
Sbjct: 695 GYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNAT 754
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ QR I+VRD SRFHHF DG CSCGDYW
Sbjct: 755 KFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 169/327 (51%), Gaps = 11/327 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D + WNT++ GL + EAL VR + ++PDS TL+S L A+ +
Sbjct: 175 VPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAM 230
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +HGY ++ GL + + + L+++Y+KC ++ + LF + D +++N++I+G
Sbjct: 231 GRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSV 290
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG+ + ++ F+++ + +P + +++P + L + LH +++ D + +
Sbjct: 291 NGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALV 350
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L +Y + ++ AR IFD M + SW A+I G A +G A++LF+ M++ V
Sbjct: 351 STALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNV 410
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + + L+AC+H G + + + + + + A+ D+ + G + EA
Sbjct: 411 QPNPITISSTLSACAHLGALSLG-KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEAR 469
Query: 300 EFISNMHAGPTENV--WLTLLSACRVH 324
M +NV W ++S +H
Sbjct: 470 SIFDRMD---NKNVVSWNAMISGYGLH 493
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D + +HG ++ G A+ + S+L +Y K +R +D+ ++F +P D I WN+++A
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188
Query: 116 GCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G + E L+ F +M+ A +++P + +S + A A + + +G+ +HG ++ G
Sbjct: 189 GLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLA 244
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++ + + L+ +Y+KCG++ A+ +FD+MD D+V++ A+I G +++G ++ LF+++
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKEL 304
Query: 235 EKDGVKPNSVAFVAVLTACSHAG 257
G +PNS VAV+ S G
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFG 327
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 316/514 (61%), Gaps = 34/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWN+++ A+NG + +AL + R+M +NLKP+ T++S+LP
Sbjct: 181 IPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLP----------- 229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
A+ + NV +Y K +F L K ISWN +IA V N
Sbjct: 230 ------AVTNTTSDNV--------LYVK--------EMFLKLTKKSVISWNVMIAMYVNN 267
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E + + QM ++P VS S++PA L+ L LG+++H R N+ +
Sbjct: 268 SMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLE 327
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG +R AR +F++M D+VSWT++I G DA+++F +M G+
Sbjct: 328 NALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLN 387
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV+VL ACSHAGL+D YFN M + GI P EH+A V DLLGRAGK+ EAY
Sbjct: 388 PDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYG 446
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P E VW LLSACRV+ N+ + A+K+ M++P + G YV+LSN YA A R
Sbjct: 447 FIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGR 506
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A++R M KG+KK P S +E+ + + F+AGD SHP +I E L L+ +M++
Sbjct: 507 WADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKE 566
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P+T LHDVEEE K+ L HSE+LA+ F II T GT IR+ KNLRVCGDCH A
Sbjct: 567 LGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVA 626
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKI +REII+RD RFHHF++G CSCGDYW
Sbjct: 627 AKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 1/217 (0%)
Query: 41 SFTLSSVLPIFADYVDVIKGKEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLF 99
SFT I Y D+ K++HG + L N +G L+ +YA C + +F
Sbjct: 18 SFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIF 77
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ K+ + +N +I V N L+ + L ++ M P ++ ++ A + +L
Sbjct: 78 DEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLW 137
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+G Q+HG +++ G D N+++ + L+ MY KC +++ A+ + D++ D+VSW +++ A
Sbjct: 138 VGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYA 197
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+G +DA+ L +ME +KPN ++L A ++
Sbjct: 198 QNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT 234
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 141 RHVSFSS-----IMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIR 194
R +SF+ I+ + TL K+LHG ++ + + N + L+ +YA CG
Sbjct: 15 RQLSFTEDLCNRILDQYPDINTL---KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPG 71
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
LAR IFD++ ++V + +I + DA+ +++ M G P+ + VL A S
Sbjct: 72 LARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASS 131
Query: 255 HAGLIDKAW 263
+ D W
Sbjct: 132 RS---DSLW 137
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 328/515 (63%), Gaps = 22/515 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G R+G + A+ +++QM +K D ++S+L A + G
Sbjct: 174 MGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 233
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + + +N+ + ++L++MYAKC +E ++ +F + VKD ISWN+
Sbjct: 234 KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNT-------- 285
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ ++KP + + I+PACA L+ L GK++HG I+RNG+ + +A
Sbjct: 286 -------------MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 332
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y KCG + LAR +FD + D+VSWT +I G +HG ++AI+ F +M G++
Sbjct: 333 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 392
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+++ W +F M D+ I P EHYA + DLL R G L +AY+
Sbjct: 393 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 452
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + P +W LL CR++ ++ELA KVAE++F ++P N G YV+L+N YA A +
Sbjct: 453 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 512
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG-DKSHPFYHRINEALKELLERME 419
W++ +R + KG++K P CSWIE+K + FV+G + SHP +I LK++ +M+
Sbjct: 513 WEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 572
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L + +E QK+ L HSE+LA+ FG++ P TIR+ KNLRVCGDCH
Sbjct: 573 EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 632
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK +REI++RD++RFHHF+DG CSC +W
Sbjct: 633 MAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 132/240 (55%), Gaps = 1/240 (0%)
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
YA ++C+ ++ + R E + LF L +D ISWNS+I+G V NGL +
Sbjct: 37 YAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTER 96
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
GL ++QM+ I + S++ CA TL LGK +H I++ F+ + +++LLD
Sbjct: 97 GLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 156
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY+KCG++ A +F+KM ++VSWT++I G G + AI L +QMEK+GVK + VA
Sbjct: 157 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVA 216
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++L AC+ +G +D + + K +A + A+ D+ + G ++ A S M
Sbjct: 217 ITSILHACARSGSLDNGKDVHDYI-KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM 275
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+ YA CG+++ R +FD M+ ++ W ++ A G+ ++I LF+ M + G++
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE 59
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL G EE+L M + PD F L SV A DV+ G
Sbjct: 133 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 192
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C +++ + +LP +S N+IIAG QN
Sbjct: 193 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 252
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L++F M + V+F S + +C+ L L G+Q+HG +++ G D + +
Sbjct: 253 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 312
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY++CG + + +F D +A+I HG+ AI LF+QM G +
Sbjct: 313 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 372
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+A+L ACSH+GL ++ F MTK YG+ PS +HY V DLLGR+G L EA
Sbjct: 373 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEA 432
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ KN ++A ++A+++ +DP++ +YV+LSN A +RR
Sbjct: 433 LILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRR 492
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +R MR+ ++K P SW+E+K + F GD+SHP I+E L+E++ ++ Q
Sbjct: 493 WGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQ 552
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLHD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 553 CGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLA 612
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +S++ REI+VRD SRFHHF+DG+CSC DYW
Sbjct: 613 IKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 25 ALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
AL +RQ+ D FT + ++ +AD D+ +E+ R NV +
Sbjct: 56 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWN 111
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
L Y K + + +LF +P ++ +WN+++AG G +E L FF M + P
Sbjct: 112 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 171
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG ++ +
Sbjct: 172 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 231
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ IVS +I G +G++ A+ F M GV + V FV+ +++CS
Sbjct: 232 RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS + AC L L +QLH +G + F A+ L+ YA G++ AR +F+++
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++SW + G +G+ A LF++M + N + A++ ++ G +++
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDEESLG 159
Query: 265 YFNSMTK------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+F M + ++G+ F A + D++ G+ AY S +
Sbjct: 160 FFLDMRREGMHPDEFGLGSVFRCCAGLRDVV--TGRQVHAYVVRSGL 204
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL G EE+L M + PD F L SV A DV+ G
Sbjct: 195 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 254
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C +++ + +LP +S N+IIAG QN
Sbjct: 255 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 314
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L++F M + V+F S + +C+ L L G+Q+HG +++ G D + +
Sbjct: 315 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 374
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY++CG + + +F D +A+I HG+ AI LF+QM G +
Sbjct: 375 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 434
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+A+L ACSH+GL ++ F MTK YG+ PS +HY V DLLGR+G L EA
Sbjct: 435 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEA 494
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ KN ++A ++A+++ +DP++ +YV+LSN A +RR
Sbjct: 495 LILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRR 554
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +R MR+ ++K P SW+E+K + F GD+SHP I+E L+E++ ++ Q
Sbjct: 555 WGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQ 614
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLHD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 615 CGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLA 674
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +S++ REI+VRD SRFHHF+DG+CSC DYW
Sbjct: 675 IKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 8/235 (3%)
Query: 24 EALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
AL +RQ+ D FT + ++ +AD D+ +E+ R NV
Sbjct: 117 RALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSW 172
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+ L Y K + + +LF +P ++ +WN+++AG G +E L FF M +
Sbjct: 173 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 232
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG ++ +
Sbjct: 233 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 292
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ IVS +I G +G++ A+ F M GV + V FV+ +++CS
Sbjct: 293 LRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 347
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS + AC L L +QLH +G + F A+ L+ YA G++ AR +F+++
Sbjct: 109 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++SW + G +G+ A LF++M + N + A++ ++ G +++
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPER----NVATWNAMVAGLTNLGFDEESLG 221
Query: 265 YFNSMTK------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+F M + ++G+ F A + D++ G+ AY S +
Sbjct: 222 FFLDMRREGMHPDEFGLGSVFRCCAGLRDVV--TGRQVHAYVVRSGL 266
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 329/511 (64%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++ +N + G AR+ A ++ ++ L PD +T SS+L A + +G +H
Sbjct: 94 DIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLH 153
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+A++ GL+ N+ I +LINMYA+C + + +F + +S+N+II G ++ +
Sbjct: 154 CFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPN 213
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR++ + I+P V+ S++ +CA L L LGK +H + + GFD + + ++L+
Sbjct: 214 EALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALI 273
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DM+AKCG++ A IF+ M + D +W+A+I+ A HG+ AIS+FE+M+++GV+P+ +
Sbjct: 274 DMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEI 333
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L ACSHAGL+++ YF SM+K YGI P +HY + DLLGRAG L EAY F+
Sbjct: 334 TFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDK 393
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ T +W TLLSAC H NVE+A +V E+IF +D + G YVILSN YA RW+D
Sbjct: 394 LEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDV 453
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
LR M+++G+ K P CS +EV N + F +GD H + AL EL++ ++ GYV
Sbjct: 454 NHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYV 513
Query: 425 PDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
PDT V H D+EEE K+ +L YHSE+LA+ FG++ TP GTTIR+ KNLR+CGDCH A K
Sbjct: 514 PDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKL 573
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IS I R+I++RD RFH FEDGKCSCGD+W
Sbjct: 574 ISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 136/269 (50%), Gaps = 5/269 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLIN---MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
K+I Y I+ L +++ + + LIN + + ++ +H LF + KD I +N + G
Sbjct: 46 KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGY 105
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
++ F ++L + + P +FSS++ ACA L G LH ++ G + N+
Sbjct: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+I +L++MYA+C ++ AR +FD+M+ IVS+ A+I G A ++A+SLF +++
Sbjct: 166 YICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
++P V ++V+ +C+ G +D + + K G + A+ D+ + G L +
Sbjct: 226 NIEPTDVTMLSVIMSCALLGALDLG-KWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTD 284
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKN 326
A M T+ W ++ A H +
Sbjct: 285 AISIFEGMRVRDTQ-AWSAMIVAFATHGD 312
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/510 (41%), Positives = 332/510 (65%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
LVSWNT+I RN + EAL+I +M N K FT+SSVL D ++ K++H
Sbjct: 128 SLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLH 187
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ LD N+ +G++L+++YAKC + D+ ++F + K +++W+S++AG VQ+ ++
Sbjct: 188 CLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYE 247
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L +R+ ++ + SS++ AC++L L GKQ+H I ++GF N+F+ASS +
Sbjct: 248 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAV 307
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG++R + IF ++ +I W +I G A H + + LFE+M++DG+ PN V
Sbjct: 308 DMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 367
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L+ C H GL+++ +F M YG++P+ HY+ + D+LGRAG L EAYE I +
Sbjct: 368 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 427
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ PT ++W +LL++CRV KN+ELA A+K+F ++P N G +V+LSN YAA ++W++
Sbjct: 428 IPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEI 487
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A R +R+ +KK SWI++K+K + F G+ SHP I L L+ + + GY
Sbjct: 488 AKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYK 547
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P + LHDVE +K+ LL HSE+LA+VFG++C P+G+T+RI+KNLR+C DCH +K
Sbjct: 548 PSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAA 607
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S +R IIVRD +RFHHF DG CSCG++W
Sbjct: 608 SMATRRFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 141/279 (50%), Gaps = 4/279 (1%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
+L + A V++ K HG +R L +V + + LIN Y+KC VE + ++F + +
Sbjct: 69 ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN++I +N + E L F +M K + SS++ AC K+LH
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
++ D N+++ ++LLD+YAKCG I A +F+ M V+W++++ G N +
Sbjct: 189 LSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A+ L+ + ++ ++ N +V+ ACS+ A LI+ +++ + G + ++
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG--KQMHAVIRKSGFGSNVFVASSA 306
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
D+ + G L+E+Y S + E +W T++S H
Sbjct: 307 VDMYAKCGSLRESYIIFSEVQEKNIE-LWNTIISGFAKH 344
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 329/515 (63%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SW T G A+N Y +AL ++RQ+ + D+ + S+L + K
Sbjct: 322 MAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKI 381
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGY IR GL V + +++I++Y +C ++ + R+F + KD +SW S+I+ V N
Sbjct: 382 KEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHN 440
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++ L+ F M ++P +V+ SI+ A L+TL GK++HG IIR GF I+
Sbjct: 441 GLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSIS 500
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYA+CG++ A IF +++ WTA+I +HG A+ LF +M+ + +
Sbjct: 501 NTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKII 560
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+A+L ACSH+GL+++ S+ M +Y + P EHY + DLLGR L+EAY+
Sbjct: 561 PDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQ 620
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M PT VW LL ACR+H N E+ AEK+ +D +N G YV++SN +AA R
Sbjct: 621 IVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGR 680
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R+ M+ G+ K P CSWIEV NK +AF++ DK HP +I + L ++ E++++
Sbjct: 681 WKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKR 740
Query: 421 E-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
E GYV TK VLH+V EE+K +LY HSERLAI +G++ T +GT IR+ KNLRVCGDCH+
Sbjct: 741 EGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHS 800
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S+ +RE+IVRD SRFHHF+DG CSCGD+W
Sbjct: 801 FCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 205/447 (45%), Gaps = 31/447 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+VSWN++I + NG+ EAL + +M + +++T ++ L D + G +I
Sbjct: 123 NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQI 182
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++ G +V + ++L+ MY + ++ ++ +F L KD ++WNS++ G +QNGL+
Sbjct: 183 HAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLY 242
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+FF + A +KP VS SI+ A L L GK++H I+NGFD N+ + ++L
Sbjct: 243 SEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTL 302
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMYAKC + FD M D++SWT G A + A+ L Q++ +G+ ++
Sbjct: 303 IDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDA 362
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
++L AC + K + P ++ + D+ G G + A
Sbjct: 363 TMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVRIFE 420
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAE-----KIFMIDPNNMGAYVILSNTYAAA 358
++ + W +++S C VH LA K E K ++P+ + ILS +
Sbjct: 421 SIECKDVVS-WTSMIS-CYVHNG--LANKALEVFSSMKETGLEPDYVTLVSILS-AVCSL 475
Query: 359 RRWKDAASLRVFMRNKG-----------MKKTPACSWIE--------VKNKAYAFVAGDK 399
K + F+ KG + C +E KN+
Sbjct: 476 STLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMI 535
Query: 400 SHPFYHRINEALKELLERMEQEGYVPD 426
S H EA EL RM+ E +PD
Sbjct: 536 SAYGMHGYGEAAVELFMRMKDEKIIPD 562
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 146/260 (56%), Gaps = 1/260 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +WN ++ G NG AL + R+M ++ + DS+T +L D+ G
Sbjct: 18 MSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCG 77
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
EIHG AI++G D+ V + +SL+ +YAKC + + +LF + V+ D +SWNSII+
Sbjct: 78 AEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSG 137
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG+ E L F +ML A + +F++ + AC + + LG Q+H I+++G ++++
Sbjct: 138 NGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYV 197
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++L+ MY + G + A IF ++ DIV+W +++ G +G +A+ F ++ +
Sbjct: 198 ANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADL 257
Query: 240 KPNSVAFVAVLTACSHAGLI 259
KP+ V+ ++++ A G +
Sbjct: 258 KPDQVSIISIIVASGRLGYL 277
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 3/237 (1%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY KC V D+ +F + + +WN+++ G V NG L+ +R+M + +
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F ++ AC + L G ++HG I+ G D +F+ +SL+ +YAKC +I AR +FD+M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 205 L-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ +D+VSW ++I + +G +A+ LF +M K GV N+ F A L AC + I
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
++ K + + A VA + R GK+ EA N+ G W ++L+
Sbjct: 181 QIHAAILKSGRVLDVYVANALVA-MYVRFGKMPEAAVIFGNLE-GKDIVTWNSMLTG 235
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 333/511 (65%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLY-EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ SW +I G + G Y EEAL++ R M ++ P+ FT SS L A+ + G+++
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
+A++ G + C+ +SLI+MYA+ R++D+ + F +L K+ IS+N++I +N
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L+ F ++ + +F+S++ A + T+ G+Q+H +I++G N + ++L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY++CGNI A +F+ M+ +++SWT++I G A HG A A+ LF +M ++GV+PN
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V ++AVL+ACSH GL+++ W +F SM ++G+ P EHYA + D+LGR+G L EA +FI+
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFIN 638
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M VW T L ACRVH N+EL A+ I +P++ AY++LSN YA+ +W +
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDE 698
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+++R M+ K + K CSW+EV+NK + F GD SHP I + L+ L ++++ GY
Sbjct: 699 VSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP+ VLHDVEEEQK+ LL+ HSE++A+ FG+I T IR+ KNLR+CGDCH+AIK+
Sbjct: 759 VPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKY 818
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IS REIIVRD +RFHH +DG+CSC +YW
Sbjct: 819 ISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 192/363 (52%), Gaps = 18/363 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+W +I L + G EA+++ M +PD FTLS V+ A+ ++ G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS----HRLFCLLPVKDAISWNSIIAG 116
+++H AIRHGL + C+G LINMYAKC+ V+ S ++F + + SW ++I G
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCS-VDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 117 CVQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
VQ G +D E L FR M++ + P H +FSS + ACA+L L +G+Q+ ++ GF
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+A+SL+ MYA+ G I AR FD + +++S+ VI A + N+ +A+ LF ++E
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+ ++ F ++L+ + G I K + K G+ + A+ + R G +
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNI 528
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYV 349
+ A++ +M NV W ++++ H + +EL K+ E+ + PN +
Sbjct: 529 ESAFQVFEDME---DRNVISWTSIITGFAKHGFATQALELFHKMLEE--GVRPNEVTYIA 583
Query: 350 ILS 352
+LS
Sbjct: 584 VLS 586
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 15/304 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SW+ ++ A N + AL M P+ + ++ + V G I
Sbjct: 132 DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ I+ G L ++VC+G LI+M+ K + + ++F +P ++A++W +I +Q G
Sbjct: 192 GFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGY 251
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E + F M+ + +P + S ++ ACA++ L LG+QLH IR+G + +
Sbjct: 252 AGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCC 311
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-HDAISLFEQMEKDG 238
L++MYAKC G++ AR IFD++ H++ SWTA+I G G +A+ LF M
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGK 294
V PN F + L AC++ + F + + F VA+ L R+G+
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFT-----HAVKLGFSSVNCVANSLISMYARSGR 426
Query: 295 LQEA 298
+ +A
Sbjct: 427 IDDA 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 3/244 (1%)
Query: 19 NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCI 78
NG +A++ + M + PD T S L G +H + L +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 79 GSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+SLI++Y+KC + E + +F L+ +D ISW+++++ N + L F M+
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDNMFIASSLLDMYAKC-GNIRL 195
P F++ AC+ + +G + G +I+ G+ ++ + L+DM+ K G++
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +F+KM + V+WT +I G A +AI LF M G +P+ V++AC++
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283
Query: 256 AGLI 259
L+
Sbjct: 284 MELL 287
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ NG + + M+ P ++S + C + +G +H + ++ +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+SL+ +Y+KCG A IF M D++SW+A++ A + A+ F M +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+G PN F A ACS A + S F + K
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIK 196
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/514 (40%), Positives = 329/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW +I G A+N + EAL ++ M +P FT +S L G
Sbjct: 123 IPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIG 182
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A+++ LD +V +GS+L++MYA+C +++ + R+F L K+ +SWN++IAG +
Sbjct: 183 EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARK 242
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +M H ++SS+ A A + L G+ +H +I++G F+A
Sbjct: 243 GDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVA 302
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++L MYAK G++ AR +FD++D D+V+W ++ A +G +A++ FE++ K G++
Sbjct: 303 NTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQ 362
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F++VLTACSH GL+ + YF+ M KDY + P +HY + DLLGRAG L+EA
Sbjct: 363 LNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLGRAGLLKEALI 421
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M PT VW LL ACR+HKN ++ A+ +F +DP + G V+L N YA+ +
Sbjct: 422 FVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQ 481
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW+E++N + FVA D +HP I +E+ R+++
Sbjct: 482 WDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKK 541
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL ++E++++ L YHSE++A+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 542 AGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSA 601
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+++S++ +REI+VRD +RFHHF +G CSCGDYW
Sbjct: 602 FRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
L P S++ A ++ + IH + R L + + +SLI+MY KC V D+
Sbjct: 57 ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F +P +D +SW +I G QN + E L ML A+ +P +F+S + A
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+G+Q+H ++ D+++++ S+LLDMYA+C + +A +FD +D + VSW A+I
Sbjct: 177 GGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALI 236
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G A G+ + F +M+++G + +V +A + G +++
Sbjct: 237 AGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQG 283
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
GL+ +L ++ P + SI+ ACA L + +H + R+ + F+ +SL+
Sbjct: 46 GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG + AR +FD + D+VSWT +I G A + +A+ L M + +P+
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165
Query: 246 FVAVLTACSHAG 257
F + L A G
Sbjct: 166 FTSFLKAAGACG 177
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 327/515 (63%), Gaps = 22/515 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G R+G + A+ +++QM +K D +S+L A + G
Sbjct: 312 MGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + +++N+ + ++L++MY KC ++ ++ +F + VKD ISWN+
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNT-------- 423
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+I ++KP + + I+PACA L+ L GK++HG I+RNG+ + +A
Sbjct: 424 -------------MIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y KCG + LAR +FD + D+VSWT +I G +HG ++AI+ F +M G++
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+++ W +F M D+ I P EHYA + DLL R G L +AYE
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + P +W LL CR++ ++ELA KVAE++F ++P N G YV+L+N YA A +
Sbjct: 591 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG-DKSHPFYHRINEALKELLERME 419
W++ +R + KG++K P CSWIE+K K FV+G + SHP +I LK++ +M+
Sbjct: 651 WEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L + +E QK+ L HSE+LA+ FG++ P T+R+ KNLRVCGDCH
Sbjct: 711 EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHE 770
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK +REI++RD++RFHHF++G CSC +W
Sbjct: 771 MAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 166/356 (46%), Gaps = 62/356 (17%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+ +N I+ + G E A+ +V L+ ++ SSVL + A + GK++H
Sbjct: 65 QVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTY--SSVLQLCAGSKSLTDGKKVH 122
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------------- 99
+ + + +G L+++YA C +++ R+F
Sbjct: 123 SIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182
Query: 100 ---CLLPV-----------------------KDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
CL + +D ISWNS+I+G V NGL + GL+ ++QM
Sbjct: 183 ESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQM 242
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ I + S++ CA+ TL LGK +H I++ F+ + +++LLDMY+KCG++
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDL 302
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A +F+KM ++VSWT++I G G + AI L +QMEK+GVK + VA ++L AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHAC 362
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISNM 305
+ +G +D DY A + E A+ D+ + G + A S M
Sbjct: 363 ARSGSLDNGKD-----VHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTM 413
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/514 (41%), Positives = 326/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW ++I G A+N + EA+ ++ M KP+ FT +S+L Y D G
Sbjct: 112 MRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTG 171
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH A++ G +V +GS+L++MYA+C +++ + +F L K+ +SWN++I+G +
Sbjct: 172 RQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARK 231
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +ML + H ++SS+ + A L L GK +H +I++ F+
Sbjct: 232 GDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVG 291
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G++ AR +FD++D D+V+W +++ A +G +A+S FE+M K GV
Sbjct: 292 NTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVY 351
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F+ +LTACSH GL+ + YF M K+Y + P +HY V LLGRAG L A
Sbjct: 352 LNQITFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHYVTVVALLGRAGLLNYALV 410
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL+ACR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 411 FIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQ 470
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA +R+ M+ G+KK PACSW+E++N + FVA D +HP I + E+ +++ +
Sbjct: 471 WDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRK 530
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VL V++++K+ L YHSE+LA+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 531 EGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSA 590
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISK+ REI+VRD +RFHHF G CSCGDYW
Sbjct: 591 FKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 120/227 (52%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
L P S + A ++ ++IH + + + +SLI+MY KC V D+
Sbjct: 46 ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F + KD +SW S+IAG QN + E + ML + KP +F+S++ A
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
G+Q+H ++ G+ +++++ S+LLDMYA+CG + +A +FDK+D + VSW A+I
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G A G+ A+ F +M ++G + + +V ++ + G +++
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQG 272
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
++ P + S + ACA L +++H + + F + F+ +SL+ MY KC ++
Sbjct: 45 GELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLD 104
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
AR +FD+M D+VSWT++I G A + +AI L M K KPN F ++L A
Sbjct: 105 ARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA 161
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/515 (42%), Positives = 333/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +S+N VI A NG ++E+ ++ R++ F +++L I +++ G
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMG 361
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI G + + ++L++MYAKC +++ ++F + K + W ++I+ VQ
Sbjct: 362 RQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQK 421
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +EG+ F M + +F+SI+ ACA+L ++ LG+QLH +IR+GF N++
Sbjct: 422 GKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG 481
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+LLD YAKCG + A F +M + VSW A+I A +GN ++ F+QM + G K
Sbjct: 482 SALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYK 541
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+F++VL+ACSH G +++A +FNSMT+ Y + P EHY ++ D+L R G+ EA +
Sbjct: 542 PDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEK 601
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
++ M P+E +W ++L++CR+HKN ELA K A+++F M D + Y+ +SN YA A
Sbjct: 602 LMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAG 661
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W + A ++ MR++G++K PA SW+E+K++ + F A DKSHP +I + L + ME
Sbjct: 662 QWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEME 721
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GY PDT LHDV+E K L YHSER AI F ++ TPDG+ I ++KNLR C DCH
Sbjct: 722 KKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHA 781
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS+IV+REIIVRD+SRFHHF+DG CSCGDYW
Sbjct: 782 AIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 163/326 (50%), Gaps = 6/326 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V++N+++ G + GL EEA+ + ++ N +KP FT +++L D G+++H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ NV +G++L++ Y+K +V++ +LF +P D IS+N +I NG F
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFK 324
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E FR++ + R F++++ L +G+Q+H I G + + ++L+
Sbjct: 325 ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALV 384
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKC + A+ IFD + V WTA+I G + I++F M + GV +
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L AC++ I +S+ G + +A+ D + G + +A +
Sbjct: 445 TFASILRACANLASISLG-RQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGE 503
Query: 305 MHAGPTEN--VWLTLLSACRVHKNVE 328
M P N W L+SA + NV+
Sbjct: 504 M---PERNSVSWNALISAYAQNGNVD 526
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 153/315 (48%), Gaps = 4/315 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW +I G ++ +EA + M ++PD TL ++L F + +IH +
Sbjct: 106 VSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTH 165
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I+ G + N+ + +SL++ Y K + + +LF + KD +++NS++ G GL +E
Sbjct: 166 VIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEA 225
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ F ++ + IKP +F++++ A L G+Q+HG +++ F N+F+ ++LLD
Sbjct: 226 IELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDY 285
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+K + +F +M D +S+ VI A +G ++ LF +++ F
Sbjct: 286 YSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 247 VAVLT-ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+L+ A S L + ++T E+ A+ D+ + +EA + N+
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEAQKIFDNI 403
Query: 306 HAGPTENVWLTLLSA 320
A + W ++SA
Sbjct: 404 -ACKSTVPWTAMISA 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 3/206 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIG-SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G +H + + + A I + +I+ + K ++ + LF + + A+SW +I G
Sbjct: 56 RGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGY 115
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+Q+ E + + M I+P +V+ +++ L T ++ Q+H +I+ G++ N+
Sbjct: 116 LQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL 175
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ +SL+D Y K + LA +F M D V++ +++ G + G +AI LF ++
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAW 263
G+KP+ F A+L+A GL D +
Sbjct: 236 GIKPSDFTFAALLSAA--VGLDDTKF 259
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 323/539 (59%), Gaps = 39/539 (7%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W +I G A GL+E+ALN QM ++P++FT SS+L + + GK +H A+
Sbjct: 43 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKL----CPIEPGKALHSQAV 98
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK----------------------- 105
+ G D+++ + + L+++YA+ V + +LF +P K
Sbjct: 99 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 158
Query: 106 --------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
D + WN +I G QNG+ +E L FR+ML AK KP V+ S++ AC L
Sbjct: 159 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 218
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G+ +H I NG N+ + ++L+DMY+KCG++ AR +FDK+D D+V+W ++I+G
Sbjct: 219 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVG 278
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+ G + +A+ LF+ M + G+ P ++ F+ +L+AC H+G + + W FN M +YGI P
Sbjct: 279 YAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEP 338
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY + +LLGRAG +++AYE + NM+ P +W TLL ACR+H + L K+ E
Sbjct: 339 KIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVE-- 396
Query: 338 FMIDPN--NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
++D N N G Y++LSN YAA W A LR M++ G+KK P CS IEV NK + F+
Sbjct: 397 LLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFL 456
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFG 455
AG +HP I L+E+ ++ GY P T VLHD+ E +K+ L HSE+LAI FG
Sbjct: 457 AGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFG 516
Query: 456 IICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+I T GTTI+I+KNLRVC DCH K ISKI R+I+VRD +RFHHF +G CSCGDYW
Sbjct: 517 LINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V WN +I G +NG+ EAL + R+M KP+ T+ SVL + G
Sbjct: 163 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 222
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y +G+ NV +G++L++MY+KC +ED+ +F + KD ++WNS+I G
Sbjct: 223 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMX 282
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F+ M + P +++F I+ AC H G G I N D I
Sbjct: 283 GFSQEALQLFKSMCRMGLHPTNITFIGILSACG-----HSGWVTEGWDIFNKMKDEYGIE 337
Query: 181 SS------LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ 233
++++ + G++ A + M++ D V W ++ LHG I+L E+
Sbjct: 338 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK----IALGEK 393
Query: 234 MEK---DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ + D NS ++ + + G D + +M KD G+
Sbjct: 394 IVELLVDQNLANSGTYILLSNIYAAVGNWDGV-ARLRTMMKDSGV 437
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 36/244 (14%)
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
YA R++ S LF W +II G GL ++ L F+ QML ++P +F
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI------------ 193
SSI+ C + GK LH ++ GFD ++++ + LLD+YA+ G++
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 194 -------------------RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
AR +FD M+ D V W +I G +G ++A+ LF +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K KPN V ++VL+AC G ++ + +S ++ GI + A+ D+ + G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 295 LQEA 298
L++A
Sbjct: 254 LEDA 257
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 314/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D VSW+ ++ G A+ G Y R++ +PD++TL V+ D ++ G
Sbjct: 796 MCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG 855
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + GLD + + ++L++MY KC +ED+ LF + +D ++W +I G +
Sbjct: 856 RLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAEC 915
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M + P V+ +++ ACA L +H + + I R F ++ +
Sbjct: 916 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 975
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DM+AKCG + AR IFD+M+ +++SW+A+I HG A+ LF M + G+
Sbjct: 976 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 1035
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V++L ACSHAGL+++ +F+ M +DY + +HY V DLLGRAG+L EA +
Sbjct: 1036 PNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALK 1095
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M E +W L ACR HK+V LA K A + + P N G Y++LSN YA A R
Sbjct: 1096 LIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGR 1155
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A +R M + +KK P +WIEV NK++ F GD +HP I E LK L ++E
Sbjct: 1156 WEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLEL 1215
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VLHDV+EE K +LY HSE+LAI FG+I TP+ T IRIIKNLRVCGDCHT
Sbjct: 1216 VGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTF 1275
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S I R IIVRD +RFHHF++G CSCGDYW
Sbjct: 1276 CKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/472 (40%), Positives = 280/472 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D VSW+ ++ G A+ G Y R++ +PD++TL V+ D ++ G
Sbjct: 120 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG 179
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + GLD + + ++L++MY KC +ED+ LF + +D ++W +I G +
Sbjct: 180 RLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 239
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M + P V+ +++ ACA L +H + + I R F ++ +
Sbjct: 240 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 299
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMYAKCG + AR IFD+M+ +++SW+A+I HG A+ LF M G+
Sbjct: 300 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGML 359
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + ++L ACSHAGL+++ +F+SM +DY + +HY V DLLGRAG+L EA +
Sbjct: 360 PDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALK 419
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M E +W L ACR HK+V LA K A + + N G YV+LSN YA A R
Sbjct: 420 LIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGR 479
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A +R M + +KKTP +WIEV NK++ F GD +HP I E LK L ++E
Sbjct: 480 WEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLEL 539
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
GYVPDT VLHDV+EE K +LY HSE+LAI FG+I TP+ T IRIIKNLR
Sbjct: 540 VGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 146/270 (54%), Gaps = 14/270 (5%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A HG+ N+ + + LI Y+ ++D++ LF + V+D++SW+ ++ G +
Sbjct: 79 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + FR+++ +P + + ++ AC L L +G+ +H + + G D + F+
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 198
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KC I AR +FDKM D+V+WT +I G A G A++++ LFE+M ++GV
Sbjct: 199 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 258
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE----HYAAVADLLGRAGKLQ 296
P+ VA V V+ AC+ G + KA + DY F+ A+ D+ + G ++
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKA-----RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVE 313
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVH 324
A E M +NV W +++A H
Sbjct: 314 SAREIFDRME---EKNVISWSAMIAAYGYH 340
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 149/276 (53%), Gaps = 14/276 (5%)
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
++ + +++H A HG+ N+ + + L+ Y+ ++D++ LF + V+D++SW+ ++
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G + G + FR+++ +P + + ++ AC L L +G+ +H + + G D
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ F+ ++L+DMY KC I AR +FDKM D+V+WT +I G A GNA++++ LF++M
Sbjct: 869 LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE----HYAAVADLLG 290
++GV P+ VA V V+ AC+ G + KA DY F+ A+ D+
Sbjct: 929 REEGVVPDKVAMVTVVFACAKLGAMHKA-----RTIDDYIQRKKFQLDVILGTAMIDMHA 983
Query: 291 RAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ G ++ A E M +NV W +++A H
Sbjct: 984 KCGCVESAREIFDRME---EKNVISWSAMIAAYGYH 1016
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 322/515 (62%), Gaps = 6/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLAR-NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MPV ++V+W TV+ LA +G +EAL + M + P+++T SSVL +
Sbjct: 130 MPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA 189
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+H ++ GLD++V + SSLI+ Y K ++ R+F + +D + WNSIIAG Q
Sbjct: 190 ---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 246
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G ++ F +M A + +S++ AC + L G+Q+H +++ +D ++ +
Sbjct: 247 SGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLIL 304
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++LLDMY KCG++ A +F +M D++SW+ ++ G A +G + +A+ +F+ M+ GV
Sbjct: 305 HNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGV 364
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V V VL ACSHAGL++ W YF SM + +GI P EH+ + DLLGRAGKL EA
Sbjct: 365 APNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAV 424
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI M P +W TLL ACR+HKN LA A +I ++P++ GA V+LSNTYA R
Sbjct: 425 EFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLR 484
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W DA MR++GM+K P SWIE++ + + F+AGD SHP I + L L+ R++
Sbjct: 485 QWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIK 544
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T+ VL D+ EQK++LL YHSE++AIVFG + DG IRI+KNLR+CGDCH
Sbjct: 545 SLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHA 604
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK R I++RD RFHHF+DG CSCGDYW
Sbjct: 605 FAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 31/155 (20%)
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
D +S ++ CV++G D G ++ RHV + H
Sbjct: 63 DPVSLTRLVKLCVRHGTADHG----------RLIHRHV-------------------EAH 93
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA-LHGNA 224
G + +G +F+++SL MYAK G + A +FD M + ++V+WT V+ A G
Sbjct: 94 GPLPHDGAG-GLFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRK 152
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+A+ M +DGV PN+ F +VL AC+ G++
Sbjct: 153 QEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGML 187
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/514 (41%), Positives = 326/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W+T++ G G EAL + +M + D + V+ + G
Sbjct: 172 MPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMG 231
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HG +RHG+ +V I +SL++MYAK + + ++F ++P ++A+SWN++I+G QN
Sbjct: 232 ASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQN 291
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L FR+M + ++P + S + ACA + L LGK +HG I+R + +
Sbjct: 292 GHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQCILG 350
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++LDMY+KCG++ AR +F+K+ D+V W A+I HG HDA++LF+++ + G+K
Sbjct: 351 TAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIK 410
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL+++ +F+ M ++GI P+ +H V DLL R+G ++EA E
Sbjct: 411 PDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANE 470
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++MH PT +W+ LLS C +K +EL +A+KI P ++G ++SN YAAA++
Sbjct: 471 MLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKK 530
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ G KK P S IEV +AFV D+SHP + I + + +L M +
Sbjct: 531 WDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRK 590
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T+ V HD++E+ K+ LL YHSERLAI FG++ T GT + IIKNLRVCGDCH A
Sbjct: 591 MGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDA 650
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+ISKIV REI+VRD RFHHF+DG CSCGDYW
Sbjct: 651 IKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 164/319 (51%), Gaps = 8/319 (2%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVIKGKEIHG 65
+WN ++ +R G AL + R + + + +PDS T + L A +D + +
Sbjct: 79 AWNALLAARSRAGSPGAALRVFRALPS-SARPDSTTFTLALTACARLGDLDAAEAVRVRA 137
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+A +G D VC S+L+++Y++C + D+ R+F +P KD ++W++++AG V G E
Sbjct: 138 FAAGYGRDVFVC--SALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVE 195
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L + +M + V ++ AC +G +HG +R+G ++ IA+SL+D
Sbjct: 196 ALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVD 255
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAK G+ +AR +F M + VSW A+I G A +G+A +A+ LF +M G++P+S A
Sbjct: 256 MYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGA 315
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
V+ L AC+ G + S + + AV D+ + G L+ A + + +
Sbjct: 316 LVSALLACADVGFLKLGKSIHGFILRRLEFQCILG--TAVLDMYSKCGSLESARKLFNKL 373
Query: 306 HAGPTENVWLTLLSACRVH 324
+ +W +++ C H
Sbjct: 374 SSRDLV-LWNAMIACCGTH 391
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 331/510 (64%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
LVSWNT+I RN + EAL+I +M N K FT+SSVL D ++ K++H
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ +D N+ +G++L+++YAKC ++D+ ++F + K +++W+S++AG VQN ++
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L +R+ ++ + SS++ AC++L L GKQ+H I ++GF N+F+ASS +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG++R + IF ++ ++ W +I G A H + + LFE+M++DG+ PN V
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L+ C H GL+++ +F M YG++P+ HY+ + D+LGRAG L EAYE I +
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ PT ++W +LL++CRV+KN+ELA AEK+F ++P N G +V+LSN YAA ++W++
Sbjct: 426 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 485
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A R +R+ +KK SWI++K+K + F G+ HP I L L+ + + GY
Sbjct: 486 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYK 545
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P + LHDVE +K+ LL HSE+LA+VFG++C P+ + +RI+KNLR+C DCH +K
Sbjct: 546 PSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAA 605
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S +R IIVRD +RFHHF DG CSCGD+W
Sbjct: 606 SMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
+L + A V++ K HG IR L+ +V + + LIN Y+KC VE + ++F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN++I +N + E L F +M K + SS++ AC K+LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
++ D N+++ ++LLD+YAKCG I+ A +F+ M V+W++++ G + N +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A+ L+ + ++ ++ N +V+ ACS+ A LI+ +++ G + ++
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG--KQMHAVICKSGFGSNVFVASSA 304
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
D+ + G L+E+Y S + E +W T++S H
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLE-LWNTIISGFAKH 342
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/515 (42%), Positives = 333/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +S+N VI A NG ++E+ ++ R++ F +++L I +++ G
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMG 361
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI G + + ++L++MYAKC +++ ++F + K + W ++I+ VQ
Sbjct: 362 RQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQK 421
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +EG+ F M + +F+SI+ ACA+L ++ LG+QLH +IR+GF N++
Sbjct: 422 GKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG 481
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+LLD YAKCG + A F +M + VSW A+I A +GN ++ F+QM + G K
Sbjct: 482 SALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYK 541
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+F++VL+ACSH G +++A +FNSMT+ Y + P EHY ++ D+L R G+ EA +
Sbjct: 542 PDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEK 601
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
++ M P+E +W ++L++CR+HKN ELA K A+++F M D + Y+ +SN YA A
Sbjct: 602 LMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAG 661
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W + A ++ MR++G++K PA SW+E+K++ + F A DKSHP +I + L + ME
Sbjct: 662 QWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEME 721
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GY PDT LHDV+E K L YHSER AI F ++ TPDG+ I ++KNLR C DCH
Sbjct: 722 KKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHA 781
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS+IV+REIIVRD+SRFHHF+DG CSCGDYW
Sbjct: 782 AIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 163/326 (50%), Gaps = 6/326 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V++N+++ G + GL EEA+ + ++ N +KP FT +++L D G+++H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ NV +G++L++ Y+K +V++ +LF +P D IS+N +I NG F
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFK 324
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E FR++ + R F++++ L +G+Q+H I G + + ++L+
Sbjct: 325 ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALV 384
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKC + A+ IFD + V WTA+I G + I++F M + GV +
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L AC++ I +S+ G + +A+ D + G + +A +
Sbjct: 445 TFASILRACANLASISLG-RQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGE 503
Query: 305 MHAGPTEN--VWLTLLSACRVHKNVE 328
M P N W L+SA + NV+
Sbjct: 504 M---PERNSVSWNALISAYAQNGNVD 526
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 153/315 (48%), Gaps = 4/315 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW +I G ++ +EA + M ++PD TL ++L F + +IH +
Sbjct: 106 VSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTH 165
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I+ G + N+ + +SL++ Y K + + +LF + KD +++NS++ G GL +E
Sbjct: 166 VIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEA 225
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ F ++ + IKP +F++++ A L G+Q+HG +++ F N+F+ ++LLD
Sbjct: 226 IELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDY 285
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+K + +F +M D +S+ VI A +G ++ LF +++ F
Sbjct: 286 YSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 247 VAVLT-ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+L+ A S L + ++T E+ A+ D+ + +EA + N+
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEAQKIFDNI 403
Query: 306 HAGPTENVWLTLLSA 320
A + W ++SA
Sbjct: 404 -ACKSTVPWTAMISA 417
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 3/206 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIG-SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G +H + + + A I + +I+ + K ++ + LF + + A+SW +I G
Sbjct: 56 RGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGY 115
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+Q+ E + + M I+P +V+ +++ L T ++ Q+H +I+ G++ N+
Sbjct: 116 LQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL 175
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ +SL+D Y K + LA +F M D V++ +++ G + G +AI LF ++
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAW 263
G+KP+ F A+L+A GL D +
Sbjct: 236 GIKPSDFTFAALLSAA--VGLDDTKF 259
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/515 (43%), Positives = 324/515 (62%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DL+SW T+I G A+N + +ALN++R++ + D + S+L +
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLI 472
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGY ++ GL A++ I ++++N+Y + A V+ + +F + KD +SW S+I CV N
Sbjct: 473 KEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHN 531
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F ++ I+P ++ S++ A A L++L GK++HG +IR GF IA
Sbjct: 532 GLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIA 591
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYA+CG + AR IF+ + D++ WT++I N +HG DAI LF +M + V
Sbjct: 592 NSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVL 651
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+A+L ACSH+GL+ + +F M +Y + P EHYA + DLL R+ L+EAY
Sbjct: 652 PDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYH 711
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ NM P+ VW LL ACR+H N +L A+K+ ++ N G YV++SNT+AA R
Sbjct: 712 FVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGR 771
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM-E 419
W D +R M+ +KK P CSWIEV+NK + F+A DKSHP + I L + + + E
Sbjct: 772 WNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKE 831
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY TK V HDV EE+K +LY HSERLA+ +G++ T GT +RI KNLR+C DCH
Sbjct: 832 KGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHA 891
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K S+I QR ++VRD SRFHHFE G CSCGD+W
Sbjct: 892 FFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 189/365 (51%), Gaps = 35/365 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWNT++ G+ +N +Y +A+N + M + KPD ++ +++ +++ G
Sbjct: 312 MLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+H YAI+HG+D+N+ IG+SLI+MY KC V+ F +P KD ISW +IIAG QN
Sbjct: 372 MEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQN 431
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L R++ + K+ + SI+ AC+ L + L K++HG +++ G D + I
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLAD-ILIQ 490
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++++Y + + AR +F+ ++ DIVSWT++I +G A +A+ LF + + ++
Sbjct: 491 NAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIE 550
Query: 241 PNSVAFVAVLTACS-----------HAGLIDKAWSY----FNSMTKDYGIAPSFE----- 280
P+ + V+VL A + H LI K + NS+ Y + E
Sbjct: 551 PDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNI 610
Query: 281 -HYAAVADLL---------GRAGKLQEAYEFISNM---HAGPTENVWLTLLSACRVHKNV 327
+Y DL+ G G ++A + S M + P +L LL AC H +
Sbjct: 611 FNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS-HSGL 669
Query: 328 ELAGK 332
+ GK
Sbjct: 670 VVEGK 674
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G EAL++ R+M V ++ +++T S L + G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++ +V + ++LI MYA C ++ED+ R+F + KD +SWN++++G VQN
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN 330
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + + F+ M + KP VS +++ A L G ++H I++G D NM I
Sbjct: 331 DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIG 390
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE--QMEKDG 238
+SL+DMY KC ++ F+ M D++SWT +I G A + DA++L Q+EK
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450
Query: 239 VKPNSVAFVAVLTACS 254
V P + ++L ACS
Sbjct: 451 VDPMMIG--SILLACS 464
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 133/254 (52%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +WN +I G Y EA+ + ++M + + D+FT VL + + G
Sbjct: 108 MSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLG 167
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
EIHG A++ G V + ++LI MYAKC + + LF L+ D +SWNSII+ V
Sbjct: 168 CEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHV 227
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G E L FR+M ++ +F S + AC T + +G+ +H I+++ +++
Sbjct: 228 GEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVY 287
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++++L+ MYA CG + A +F M D VSW ++ G + DAI+ F+ M+ G
Sbjct: 288 VSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSG 347
Query: 239 VKPNSVAFVAVLTA 252
KP+ V+ + ++ A
Sbjct: 348 QKPDQVSVLNMIAA 361
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 146/286 (51%), Gaps = 7/286 (2%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIR--HGLDANVCIGSSLINMYAKCARVEDSH 96
P S L + A + + +G+++H + ++ + LD+ V + + ++MY KC D+
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDS-VFLDTKFVHMYGKCGSFYDAV 102
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
++F + + +WN++I CV G + E ++ +++M + + +F ++ AC
Sbjct: 103 KVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK--MDLHDIVSWTAV 214
LG ++HG ++ G+ +F+ ++L+ MYAKCG++ AR +FD M+ D VSW ++
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I + G + +A+SLF +M++ GV+ N+ FV+ L AC I + K
Sbjct: 223 ISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNH 282
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ A +A + G++++A +M + W TLLS
Sbjct: 283 FTDVYVSNALIA-MYANCGQMEDAERVFKSMLFKDCVS-WNTLLSG 326
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/514 (43%), Positives = 329/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D++ W+ +I A++ E+A + +M + P+ F+LS VL A+ + G
Sbjct: 310 IPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG 369
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH AI+ G ++ + +G++L++MYAKC +E+S +F L + +SWN+II G Q+
Sbjct: 370 EQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQS 429
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L F +M A + V+FSS++ ACA+ +++ Q+H I ++ F+++ +
Sbjct: 430 GFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVC 489
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D YAKCG IR A +F+ + D+VSW ++I ALHG A +A+ LF++M K +K
Sbjct: 490 NSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIK 549
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V FV++L+ C GL+++ FNSM D+ I PS EHY + LLGRAG+L +A +
Sbjct: 550 ANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALK 609
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI ++ + P+ VW LLS+C VHKNV L AEK+ I+P++ YV+LSN YAAA
Sbjct: 610 FIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGI 669
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
+ A R MRN G+KK SW+E+K + +AF G HP IN L+ L + +
Sbjct: 670 LDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASR 729
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VLHDV+EE+K +L+ HSERLA+ +G+ TP G IRI+KNLR C DCHT
Sbjct: 730 EGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTM 789
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIVQREIIVRD +RFHHFE+G CSCGDYW
Sbjct: 790 FKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V+W ++ + N + E ALN +M KP+ F L+S L + GK IH
Sbjct: 213 DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIH 272
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G +++ D +G +L++MYAKC +ED+H +F ++P D I W+ +I+ Q+ +
Sbjct: 273 GCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNE 332
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M+ + + P S S ++ ACA++ L LG+Q+H I+ G++ +F+ ++L+
Sbjct: 333 QAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM 392
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKC N+ + IF + + VSW +I+G G A DA+S+F +M + V
Sbjct: 393 DMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQV 452
Query: 245 AFVAVLTACSHAGLIDKA 262
F +VL AC++ I A
Sbjct: 453 TFSSVLRACANTSSIKHA 470
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+ T++ G A G +EEAL + R++ + + F L+++L +
Sbjct: 108 MPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLA 167
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH A + G D N +G++LI+ Y+ C V + +F + KDA++W ++++ +N
Sbjct: 168 CGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSEN 227
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + L F +M + KP +S + A L++ LGK +HGC ++ +D +
Sbjct: 228 DIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVG 287
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LLDMYAKCG+I A IF+ + D++ W+ +I A A +F +M + V
Sbjct: 288 GALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVV 347
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + VL AC++ ++ N K G A+ D+ + ++ + E
Sbjct: 348 PNEFSLSGVLQACANIAFLELGEQIHNLAIK-LGYESELFVGNALMDMYAKCRNMENSLE 406
Query: 301 FISNMHAGPTENVWLTLL 318
S++ E W T++
Sbjct: 407 IFSSLQ-DANEVSWNTII 423
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 9/290 (3%)
Query: 16 LARNGLYEEALN-IVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLD 73
L+RN EAL + ++ ++ L K DS+ + L D G+ +H ++ G
Sbjct: 18 LSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGV 77
Query: 74 A--NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
A + + L+N YAK + + RLF +P ++ +S+ +++ G G F+E L+ FR
Sbjct: 78 AQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFR 137
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
++ + H ++I+ + L +H C + G D N F+ ++L+D Y+ CG
Sbjct: 138 RLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCG 197
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ ARC+FD + D V+WTA++ + + A++ F +M G KPN + L
Sbjct: 198 AVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALK 257
Query: 252 A--CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
A C + L+ K + S+ Y P A+ D+ + G +++A+
Sbjct: 258 AAVCLSSALLGKG-IHGCSVKTLYDTEPHVG--GALLDMYAKCGDIEDAH 304
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/508 (42%), Positives = 323/508 (63%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WNT+I G A G A+++ R+M + ++PD+ T +L DV G+ IH
Sbjct: 88 WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR G + + + +SL+++YA C V ++++F +P KD ++WNS+I G +NG +E L
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ +M + IKP + S++ ACA + L LGK+ H +I+ G N+ ++ LLD+Y
Sbjct: 208 ALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVKPNSVAF 246
A+CG + A+ +FD+M + VSWT++I+G A++G +AI LF+ ME K+G+ P + F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITF 327
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V +L ACSH G++ + + YF M+++Y I P EH+ + DLL RAG++++AYE+I M
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMP 387
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W TLL AC VH + +LA KI ++PN+ G YV+LSN YA+ +RW D
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M G++K P S +EV N+ + F+ GDKSHP I LKE+ +R+ EGYVP
Sbjct: 448 IRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQ 507
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
V DVEEE+K+N L YHSE++AI F +I TP+ IR++KNL+VC DCH AIK +SK
Sbjct: 508 ISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSK 567
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ REI+VRD SRFHHF++G CSC DYW
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 131/245 (53%), Gaps = 5/245 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV+WN+VI G A NG EEAL + +M +KPD FT+ S+L A + G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K H Y I+ GL N+ + L+++YA+C RVE++ LF + K+++SW S+I G N
Sbjct: 242 KRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
GL E ++ F+ M + + P ++F I+ AC+H + G + + + +
Sbjct: 302 GLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIE 361
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++D+ A+ G ++ A KM + ++V W ++ +HG++ ++ +M+
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSD--LAELARMKIL 419
Query: 238 GVKPN 242
++PN
Sbjct: 420 QLEPN 424
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 333/511 (65%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLY-EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ SW +I G + G Y EEAL++ R M ++ P+ FT SS L A+ + G+++
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
+A++ G + C+ +SLI+MYA+ R++D+ + F +L K+ IS+N++I +N
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L+ F ++ + +F+S++ A + T+ G+Q+H +I++G N + ++L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY++CGNI A +F+ M+ +++SWT++I G A HG A A+ LF +M ++GV+PN
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V ++AVL+ACSH GL+++ W +F SM ++G+ P EHYA + D+LGR+G L EA +FI+
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFIN 638
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M VW T L ACRVH N+EL A+ I +P++ AY++LSN YA+ +W +
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDE 698
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+++R M+ K + K CSW+EV+NK + F GD SHP I + L+ L ++++ GY
Sbjct: 699 VSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP+ VLHDVEEEQK+ LL+ HSE++A+ FG+I T IR+ KNLR+CGDCH+AIK+
Sbjct: 759 VPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKY 818
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IS REIIVRD +RFHH +DG+CSC +YW
Sbjct: 819 ISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 193/363 (53%), Gaps = 18/363 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+W +I L + G EA+++ +M +PD FTLS V+ A+ ++ G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS----HRLFCLLPVKDAISWNSIIAG 116
+++H AIRHGL + C+G LINMYAKC+ V+ S ++F + + SW ++I G
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCS-VDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 117 CVQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
VQ G +D E L FR M++ + P H +FSS + ACA+L L +G+Q+ ++ GF
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+A+SL+ MYA+ G I AR FD + +++S+ VI A + N+ +A+ LF ++E
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+ ++ F ++L+ + G I K + K G+ + A+ + R G +
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNI 528
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYV 349
+ A++ +M NV W ++++ H + +EL K+ E+ + PN +
Sbjct: 529 ESAFQVFEDME---DRNVISWTSIITGFAKHGFATQALELFHKMLEE--GVRPNLVTYIA 583
Query: 350 ILS 352
+LS
Sbjct: 584 VLS 586
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 152/304 (50%), Gaps = 15/304 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SW+ ++ A N + AL M P+ + ++ + V G I
Sbjct: 132 DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ ++ G L ++VC+G LI+M+ K + + ++F +P ++A++W +I +Q G
Sbjct: 192 GFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGY 251
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E + F +M+++ +P + S ++ ACA++ L LG+QLH IR+G + +
Sbjct: 252 AGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCC 311
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-HDAISLFEQMEKDG 238
L++MYAKC G++ AR IFD++ H++ SWTA+I G G +A+ LF M
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGK 294
V PN F + L AC++ + F + + F VA+ L R+G+
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFT-----HAVKLGFSSVNCVANSLISMYARSGR 426
Query: 295 LQEA 298
+ +A
Sbjct: 427 IDDA 430
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 3/244 (1%)
Query: 19 NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCI 78
NG +A++ + M + PD T S L G +H + L +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 79 GSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+SLI++Y+KC + E + +F L+ +D ISW+++++ N + L F M+
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDNMFIASSLLDMYAKC-GNIRL 195
P F++ AC+ + +G + G +++ G+ ++ + L+DM+ K G++
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +F+KM + V+WT +I G A +AI LF +M G +P+ V++AC++
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283
Query: 256 AGLI 259
L+
Sbjct: 284 MELL 287
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ NG + + M+ P ++S + C + +G +H + ++ +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+SL+ +Y+KCG A IF M D++SW+A++ A + A+ F M +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+G PN F A ACS A + S F + K
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVK 196
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/516 (42%), Positives = 323/516 (62%), Gaps = 35/516 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SWN +I GL +NG +AL+++ +M +K + T+ S+LP+F D
Sbjct: 176 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVD------- 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
MYAK ++ +H++F ++PVKD ISWN++I G QN
Sbjct: 229 ------------------------MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 264
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL E ++ ++ M K I P ++ SI+PA AH+ L G ++HG +I+ ++F+
Sbjct: 265 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 324
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+ L+D+Y KCG + A +F ++ V+W A+I + +HG+A + LF +M +GV
Sbjct: 325 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 384
Query: 240 KPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP+ V FV++L+ACSH+G +++ W + + ++YGI PS +HY + DLLGRAG L+ A
Sbjct: 385 KPDHVTFVSLLSACSHSGFVEEGKWCF--RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA 442
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FI +M P ++W LL ACR+H N+EL ++++F +D N+G YV+LSN YA
Sbjct: 443 YDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANV 502
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ +R R +G+KKTP S IEV K F G++SHP I E L+ L +M
Sbjct: 503 GKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKM 562
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GY+PD VL DVEE++K+++L HSERLAI FGII TP + IRI KNLRVCGDCH
Sbjct: 563 KSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCH 622
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS+I QREI+VRD++RFHHF+DG CSCGDYW
Sbjct: 623 NATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 52/337 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+P D+ +WN++I NG + EA+ Q+ V+ ++PD +T VL VD
Sbjct: 77 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD--- 133
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++IH +A + G NV + +SLI+MY++ + LF +P +D SWN++I+G +Q
Sbjct: 134 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 193
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L +M + IK V+ SI+P
Sbjct: 194 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPV---------------------------- 225
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
+DMYAK G + A +F+ + + D++SW +I G A +G A +AI +++ ME+
Sbjct: 226 ---FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE 282
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-----DYGIAPSFEHYAAVADLLGRAG 293
+ PN +V++L A +H G + + + K D +A + D+ G+ G
Sbjct: 283 IIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVA------TCLIDVYGKCG 336
Query: 294 KLQEAYEFISNMHAGPTEN--VWLTLLSACRVHKNVE 328
+L +A +S + P E+ W ++S +H + E
Sbjct: 337 RLVDA---MSLFYQVPQESSVTWNAIISCHGIHGHAE 370
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 159/321 (49%), Gaps = 26/321 (8%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + G ++ I + L+N+YA V S F +P KD +WNS+I+ V N
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 95
Query: 121 GLFDEGLK-FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G F E + F++ +L+++I+P +F ++ AC TL G+++H + GF N+F+
Sbjct: 96 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFV 152
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+ MY++ G +AR +FD M D+ SW A+I G +GNA A+ + ++M +G+
Sbjct: 153 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 212
Query: 240 KPNSVAFVAVLTAC----SHAGLIDKAWSYFNSM-TKDY----GIAPSFEHYAAVADLLG 290
K N V V++L + GL+D A F + KD + + ++ +
Sbjct: 213 KMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIE 272
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSA----CRVHKNVELAGKVAEKIFMIDPNNMG 346
++E E I P + W+++L A + + +++ G+V + +D +
Sbjct: 273 VYKMMEECKEII------PNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD---VF 323
Query: 347 AYVILSNTYAAARRWKDAASL 367
L + Y R DA SL
Sbjct: 324 VATCLIDVYGKCGRLVDAMSL 344
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
T K LH ++ G ++FI++ L+++YA G++ L+RC FD++ D+ +W ++I
Sbjct: 30 TKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMI 89
Query: 216 MGNALHGNAHDAISLFEQ-MEKDGVKPNSVAFVAVLTACSHAGLID----KAWSYFNSMT 270
+G+ H+AI F Q + ++P+ F VL AC L+D W++
Sbjct: 90 SAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRKIHCWAFKLGFQ 147
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +A S H + G A L + F
Sbjct: 148 WNVFVAASLIHMYSRFGFTGIARSLFDDMPF 178
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 327/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++ +WN++ G ++G +EE + + +M ++++ D TL SVL D+ G
Sbjct: 185 MSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG 244
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I+ Y GL N + +SL++MYAKC +V+ + RLF + +D ++W+++I+G Q
Sbjct: 245 EWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQA 304
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L F +M A I P ++ SI+ +CA L L GK +H I + + +
Sbjct: 305 SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG 364
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D YAKCG++ + +F KM + +++SWT +I G A +G A+ F M + V+
Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVE 424
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ VL+ACSHAGL+D+ F SM++D+GI P EHY + D+LGRAG ++EA++
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQ 484
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P +W TLL++C+VHKNVE+ + +++ +++P + G Y++LSN YA+ R
Sbjct: 485 FIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGR 544
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DA +R M+ KG+KKTP CS IE+ + F A D H I A+++++++++
Sbjct: 545 WEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKS 604
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T E D EE+ K++ + +HSE+LAI FG+I +P GTTIRI KNLRVC DCH A
Sbjct: 605 AGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNA 664
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK+ REI+VRD +RFHHF++G CSC DYW
Sbjct: 665 TKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 188/357 (52%), Gaps = 18/357 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++N +I G EA+ + ++M +++PD FT +L + + + +G++IH
Sbjct: 88 DSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIH 147
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G ++ + ++LI+MYA C VE + R+F + ++ +WNS+ AG ++G ++
Sbjct: 148 ALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWE 207
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E +K F +ML I+ V+ S++ AC L L LG+ ++ + G N + +SL+
Sbjct: 208 EVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLV 267
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + AR +FD+MD D+V+W+A+I G + +A+ LF +M+K + PN +
Sbjct: 268 DMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEI 327
Query: 245 AFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V++L++C+ G ++ W +F K + + A+ D + G ++ + E
Sbjct: 328 TMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG--TALMDFYAKCGSVESSIEVFG 385
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM------IDPNNMGAYVILS 352
M P +NV W L+ + GK A + F ++PN++ +LS
Sbjct: 386 KM---PVKNVLSWTVLIQGLASNGQ----GKKALEYFYLMLEKNVEPNDVTFIGVLS 435
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 152/324 (46%), Gaps = 11/324 (3%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKC--ARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
EIH + I+ L + +L+ A ++ + +F + D+ ++N +I G
Sbjct: 42 EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E + F++M ++P +F I+ C+ L L G+Q+H I++ GF + F+
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFV 161
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MYA CG + +AR +FD+M ++ +W ++ G GN + + LF +M + +
Sbjct: 162 KNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDI 221
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + V V+VLTAC ++ + N ++ G+ + ++ D+ + G++ A
Sbjct: 222 RFDEVTLVSVLTACGRLADLELG-EWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTAR 280
Query: 300 EFISNMHAGPTENVWLTLLS----ACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
M W ++S A R + ++L ++ + IDPN + ILS+
Sbjct: 281 RLFDQMDRRDV-VAWSAMISGYSQASRCREALDLFHEMQKA--NIDPNEITMVSILSSC- 336
Query: 356 AAARRWKDAASLRVFMRNKGMKKT 379
A + + F++ K MK T
Sbjct: 337 AVLGALETGKWVHFFIKKKRMKLT 360
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 327/515 (63%), Gaps = 22/515 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G R+G + A+ +++QM +K D ++S+L A + G
Sbjct: 312 MGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + +++N+ + ++L++MYAKC +E ++ +F + VKD ISWN+
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNT-------- 423
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+I ++KP + + ++PACA L+ L GK++HG I+RNG+ + +A
Sbjct: 424 -------------MIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y KCG + LAR +FD + D+VSWT +I G +HG ++AI+ F +M G++
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+++ W +F M D+ I P EHYA + DLL R G L +AYE
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ + P +W LL CR + ++ELA KVAE++F ++P N G YV+L+N YA A +
Sbjct: 591 FMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG-DKSHPFYHRINEALKELLERME 419
W++ LR + +G++K P CSWIE+K K FV+G + SHP I LK++ +M+
Sbjct: 651 WEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EG+ P TK L + +E QK+ L HSE+LA+ FG++ P TIR+ KNLRVCGDCH
Sbjct: 711 EEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 770
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK +REI++RD++RFHHF+DG CSC +W
Sbjct: 771 MAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 62/355 (17%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+ +N I+ + G E A+ ++ L+ ++ SVL + A GK++H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCQKSELETKTY--GSVLQLCAGLKSFTDGKKVHS 123
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-------------------------- 99
+ + + +G L++ YA C +++ R+F
Sbjct: 124 IIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 100 --CLLPV-----------------------KDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
CL + +D ISWNS+I+G V NGL + GL ++QM+
Sbjct: 184 SICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
I + S++ CA+ TL LGK +H I++ F+ + +++LLDMY+KCG++
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F+KM ++VSWT++I G G + AI L +QMEK+GVK + VA ++L AC+
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISNM 305
+G +D DY A + E A+ D+ + G ++ A S M
Sbjct: 364 RSGSLDNGKD-----VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 322/514 (62%), Gaps = 2/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSWNT+I G A+NG EEA +M + P T+ VL A+ D+ +G
Sbjct: 307 MRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG 366
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + LD+NV + +SLI+MY+KC RV+ + +F L K ++WN++I G QN
Sbjct: 367 WFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQN 425
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M IK + ++ A A + K +HG +R D+N+F++
Sbjct: 426 GCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVS 485
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG I+ AR +FD M +++W A+I G HG + + LF +M+K VK
Sbjct: 486 TALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVK 545
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F++V++ACSH+G +++ F SM +DY + P+ +HY+A+ DLLGRAG+L +A+
Sbjct: 546 PNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWN 605
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +V +L AC++HKNVEL K A+K+F +DP+ G +V+L+N YA+
Sbjct: 606 FIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSM 665
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M +KG+ KTP CSW+E++N+ + F +G +HP +I L+ L + ++
Sbjct: 666 WDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKA 725
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD + HDVEE+ KK LL HSERLAI FG++ T GTT+ I KNLRVCGDCH
Sbjct: 726 AGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDT 784
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS + REIIVRD RFHHF++G CSCGDYW
Sbjct: 785 TKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 195/405 (48%), Gaps = 48/405 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLVSW T++ G A+NG + AL +V QM KPDS TL S+LP AD + G
Sbjct: 206 MQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIG 265
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHGYA R G ++ V + ++L++MY KC + +F + K +SWN++I GC QN
Sbjct: 266 RSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQN 325
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E F +ML P V+ ++ ACA+L L G +H + + D N+ +
Sbjct: 326 GESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVM 385
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+KC + +A IF+ ++ + V+W A+I+G A +G +A++LF M+ G+K
Sbjct: 386 NSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIK 444
Query: 241 PNSVAFVAVLTAC-----------------------------------SHAGLIDKAWSY 265
+ V V+TA + G I A
Sbjct: 445 LDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKL 504
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWLTLLSACR 322
F+ M + + I + A+ D G G +E + + M G P + +L+++SAC
Sbjct: 505 FDMMQERHVIT-----WNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACS 559
Query: 323 VHKNVE---LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
VE L K ++ + ++P M Y + + A + DA
Sbjct: 560 HSGFVEEGLLLFKSMQEDYYLEP-TMDHYSAMVDLLGRAGQLDDA 603
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 153/257 (59%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V ++ ++ G A+N +AL +M ++ + +L + + +D+ KG+EIHG
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I +G ++N+ + ++++++YAKC ++++++++F + KD +SW +++AG QNG
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ QM A KP V+ SI+PA A + L +G+ +HG R+GF+ + + ++LLDM
Sbjct: 231 LQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDM 290
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG+ R+AR +F M +VSW +I G A +G + +A + F +M +G P V
Sbjct: 291 YFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTM 350
Query: 247 VAVLTACSHAGLIDKAW 263
+ VL AC++ G +++ W
Sbjct: 351 MGVLLACANLGDLERGW 367
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 150/314 (47%), Gaps = 25/314 (7%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I + I++G + +I+++ K ++ R+F + +K + ++ ++ G +N
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ L FF +M+ +++ ++ ++ C L G+++HG II NGF+ N+F+ +
Sbjct: 125 SLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMT 184
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+++ +YAKC I A +F++M D+VSWT ++ G A +G+A A+ L QM++ G KP
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKP 244
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQE 297
+SV V++L A + KA S+ Y FE A+ D+ + G +
Sbjct: 245 DSVTLVSILPAVADM----KALRIGRSI-HGYAFRSGFESLVNVTNALLDMYFKCGSARI 299
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELA----------GKVAEKIFMIDPNNMGA 347
A M + T W T++ C + E A G+V ++ M MG
Sbjct: 300 ARLVFKGMRS-KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTM-----MGV 353
Query: 348 YVILSNTYAAARRW 361
+ +N R W
Sbjct: 354 LLACANLGDLERGW 367
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 326/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSW +I G A N E+A + M ++PD T ++ A D+
Sbjct: 324 MKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIH +R G ++ + ++L++MYAKC ++D+ ++F + +D +SW+++I V+N
Sbjct: 384 REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVEN 443
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + F M ++P V++ +++ AC HL L LG +++ I+ ++ +
Sbjct: 444 GCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG 503
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++M K G+I AR IF+ M D+V+W +I G +LHGNA +A+ LF++M K+ +
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PNSV FV VL+ACS AG +++ +F+ + GI P+ E Y + DLLGRAG+L EA
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAEL 623
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I+ M P ++W TLL+ACR++ N+++A + AE+ M +P + YV LS+ YAAA
Sbjct: 624 LINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGM 683
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A +R M ++G++K C+WIEV+ K + FV D+SHP I L L+ +++
Sbjct: 684 WENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKR 743
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+P T+ VLH+V E++K+ + YHSE+LAI +G++ P G IRI KNLRVCGDCH+A
Sbjct: 744 EGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSA 803
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ REII RD SRFHHF++G CSCGDYW
Sbjct: 804 SKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 144/267 (53%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ ++N +I G A++G E+A + +M KP+ + S+L + + GK +H
Sbjct: 227 DVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVH 286
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ GL +V + ++LI MY C +E + R+F + V+D +SW +I G +N +
Sbjct: 287 AQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIE 346
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F M I+P +++ I+ ACA L L +++H ++R GF ++ + ++L+
Sbjct: 347 DAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALV 406
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG I+ AR +FD M D+VSW+A+I +G +A F M+++ V+P+ V
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTK 271
++ +L AC H G +D + K
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIK 493
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 161/300 (53%), Gaps = 1/300 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+WN +I G A+ G +EA + RQM + ++P T VL + + GKE H
Sbjct: 127 VVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHA 186
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
I+ G ++ IG++L++MY K ++ + ++F L +D ++N +I G ++G ++
Sbjct: 187 QVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEK 246
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F +M KP +SF SI+ C+ L GK +H + G D++ +A++L+
Sbjct: 247 AFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIR 306
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY CG+I AR +FDKM + D+VSWT +I G A + N DA LF M+++G++P+ +
Sbjct: 307 MYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRIT 366
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++ ++ AC+ + + A + + + G A+ + + G +++A + M
Sbjct: 367 YIHIINACASSADLSLAREIHSQVVRA-GFGTDLLVDTALVHMYAKCGAIKDARQVFDAM 425
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 126/230 (54%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
A +++ ++G + DS T + D GK++ + I+ G N+ ++LI
Sbjct: 45 ANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIK 104
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+++ C + ++ + F + K ++WN+IIAG Q G E FRQM+ ++P ++
Sbjct: 105 LHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIIT 164
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F ++ AC+ L LGK+ H +I+ GF + I ++L+ MY K G++ AR +FD +
Sbjct: 165 FLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLY 224
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
D+ ++ +I G A G+ A LF +M+++G KPN ++F+++L CS
Sbjct: 225 KRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 330/543 (60%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I G +G+ EA + R+M + D FT +SVL A+ GK +HG
Sbjct: 260 VVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQ 319
Query: 67 AIRHG----LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN-- 120
IR +A + + ++L+ Y+KC + + R+F + +KD +SWN+I++G V++
Sbjct: 320 IIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSC 379
Query: 121 -----------------------------GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
G ++ LK F +M +KP +++ + A
Sbjct: 380 LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAA 439
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C L L GKQLHG I++ GF+ + ++L+ MYA+CG ++ A +F M D VSW
Sbjct: 440 CGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSW 499
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I HG+ +A+ LF++M +G+ P+ ++F+ VLTAC+H+GL+D+ + YF SM +
Sbjct: 500 NAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR 559
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
D+GI P +HY + DLLGRAG++ EA + I M PT ++W +LS CR ++EL
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+++F + P + G Y++LSNTY+AA W DAA +R MR++G+KK P CSWIE NK
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ GD HP H + + L+ + +M + GYVPDTK VLHD+E QK+++L+ HSERLA
Sbjct: 680 HVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLA 739
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+ FG++ P G T+ ++KNLR+C DCH AI F+SK V REI+VRD RFHHF+DG+CSCG
Sbjct: 740 VGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCG 799
Query: 512 DYW 514
+YW
Sbjct: 800 NYW 802
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 173/386 (44%), Gaps = 59/386 (15%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADY--VDVIKGK 61
D V N VI AR A+ + R + + +L+PD ++ +++L + V
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCA 179
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISW-------- 110
++H ++ G + + ++L+ +Y KC E D+ ++ +P KD ++W
Sbjct: 180 QLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYV 239
Query: 111 -----------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
N++I+G V +G+ E + FR+M++ ++ +F+S
Sbjct: 240 RRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTS 299
Query: 148 IMPACAHLTTLHLGKQLHGCIIR--NGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ ACA++ GK +HG IIR F + + + ++L+ Y+KCGNI +AR IFD M
Sbjct: 300 VLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
L D+VSW ++ G A+ +FE+M N ++++ +++ H G + A
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK----NELSWMVMVSGYVHGGFAEDAL 415
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM------HAGPTENVWLTL 317
FN M + + P YA G G L+ + ++ + N +T+
Sbjct: 416 KLFNKMRSE-NVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITM 474
Query: 318 LSACRVHKNVELAGKVAEKIFMIDPN 343
+ C K L +F++ PN
Sbjct: 475 YARCGAVKEAHL-------MFLVMPN 493
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW ++ G G E+AL + +M + N+KP +T + + + + G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG 449
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG+ ++ G + + G++LI MYA+C V+++H +F ++P D++SWN++I+ Q+
Sbjct: 450 KQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQH 509
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F +M+ I P +SF +++ AC H + G + + R+ G
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDH 569
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN----AHDAISLFEQM 234
+ L+D+ + G I AR + M S W A++ G G+ AH A LF+
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629
Query: 235 EK-DGV 239
+ DG
Sbjct: 630 PQHDGT 635
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 63 IHGYAIRHGLDANVCI---------GSSLINMYAKCARVEDSHRLFCLLPV--KDAISWN 111
IH Y + L A + +SL+ YA R+ + F +P +D + N
Sbjct: 66 IHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHN 125
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCI 168
++I+ + + FR +L + ++P SF++++ A HL + + QLH +
Sbjct: 126 AVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSV 185
Query: 169 IRNGFDDNMFIASSLLDMYAKCGN---IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
+++G + + ++L+ +Y KC + R AR + D+M D ++WT +++G G+
Sbjct: 186 LKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVG 245
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
A S+FE+++ V + A+++ H+G+ +A+ F M
Sbjct: 246 AARSVFEEVDGK----FDVVWNAMISGYVHSGMAVEAFELFRRM 285
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/513 (39%), Positives = 328/513 (63%), Gaps = 1/513 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +I R GL+++ ++++M ++PD F ++S L FA + +G
Sbjct: 579 MGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQG 638
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGY IR+G++ + + ++L+ MY KC VE++ +F + KD ISWN++I G +N
Sbjct: 639 KSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRN 698
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E F ML+ + +P V+ + I+PA A +++L G+++H +R GF ++ + +
Sbjct: 699 NFPNESFSLFSDMLL-QFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYAS 757
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG + +AR +FD++ +++SWT +I G +HG AI+LFEQM G++
Sbjct: 758 NALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIE 817
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P++ +F A+L AC H+GL + +F +M K+Y I P +HY + DLL R G L+EA E
Sbjct: 818 PDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALE 877
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P ++W++LL CR+HKNV+LA KVA+K+F ++P N G YV+L+N YA A R
Sbjct: 878 FIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAER 937
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ L+ + +G+++ SWIEV++K + F+A +++HP ++RI E L ++ RM Q
Sbjct: 938 WEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQ 997
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EG+ P K L ++ L HS +LA+ FG++ P+G IR+ KN +VC CH A
Sbjct: 998 EGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEA 1057
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
KFISK+ REII+RD+SRFH FE G+CSC Y
Sbjct: 1058 AKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 151/262 (57%), Gaps = 1/262 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +SWN+VI G + NGL EA+ + +M + DS TL SVLP A G
Sbjct: 478 MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAG 537
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HGY+++ GL + ++L++MY+ C+ + ++++F + K+ +SW ++I ++
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GLFD+ ++M++ I+P + +S + A A +L GK +HG IRNG + + +A
Sbjct: 598 GLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA 657
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY KC N+ AR IFD++ D++SW +I G + + +++ SLF M +
Sbjct: 658 NALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FR 716
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
PN+V +L A + +++
Sbjct: 717 PNAVTMTCILPAAASISSLERG 738
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 148/277 (53%), Gaps = 18/277 (6%)
Query: 1 MP--VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +D+ W +++ A+ G ++EA+++ RQM + PD+ +S VL + +
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLT 221
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IHG + GL + ++LI +Y++C R+ED+ R+F + +DAISWNS+I GC
Sbjct: 222 EGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCF 281
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF----- 173
NG + F +M + V+ S++PACA L +GK +HG +++G
Sbjct: 282 SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLD 341
Query: 174 -----DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
D+ + S L+ MY KCG++ AR +FD M ++ W ++ G A G ++
Sbjct: 342 SVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEES 401
Query: 228 ISLFEQMEKDGVKPNSVAFVAVLT-----ACSHAGLI 259
+SLF QM + G+ P+ A +L +C+ GL+
Sbjct: 402 LSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLV 438
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 128/244 (52%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ G A+ G +EE+L++ QM + + PD +S +L G HGY +
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIV 444
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G A + ++LI+ YAK + D+ +F +P +D ISWNS+I+GC NGL E ++
Sbjct: 445 KLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIE 504
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M + V+ S++PACA G+ +HG ++ G +A++LLDMY+
Sbjct: 505 LFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYS 564
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
C + + IF M ++VSWTA+I G L ++M DG++P+ A +
Sbjct: 565 NCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTS 624
Query: 249 VLTA 252
L A
Sbjct: 625 ALHA 628
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGF----DDNMFIASSLLDMYAKCGNIRLARCI 199
S+ ++ C +L K+ H I + + L+ Y KCG++ AR +
Sbjct: 99 SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTV 158
Query: 200 FDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
FD M D+ WT+++ A G+ +A+SLF QM+ GV P++ A VL S G
Sbjct: 159 FDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLG 218
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLT 316
+ + + + + G+ + A+ + R G++++A +MH P + + W +
Sbjct: 219 SLTEG-EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMH--PRDAISWNS 275
Query: 317 LLSAC 321
++ C
Sbjct: 276 MIGGC 280
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 326/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+++WNT+I GL +G EEA + +M + PD T ++L A + G
Sbjct: 307 LPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACG 366
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH A++ GL ++V G++LINMY+K ++D+ ++F +P +D +SW +++ G
Sbjct: 367 KEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADC 426
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E F++ML ++ +++ ++ AC++ L GK++H +++ G ++ +A
Sbjct: 427 GQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVA 486
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY KCG++ A + + M D+V+W +I G A +G +A+ FE M+ + ++
Sbjct: 487 NALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMR 546
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN+ FV V++AC L+++ F SM KDYGI P+ +HYA + D+L RAG L EA +
Sbjct: 547 PNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAED 606
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P+ +W LL+ACR H NVE+ + AE+ ++P N G YV LS YAAA
Sbjct: 607 VILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGM 666
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A LR M+ +G+KK P SWIEV + ++FVAGD+SHP I L+ L ++++
Sbjct: 667 WRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKS 726
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT+ V+HD+++E K+ + +HSE+LAI +G+I TP T IR+ KNLRVC DCHTA
Sbjct: 727 LGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTA 786
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI REII RD RFHHF++G+CSCGDYW
Sbjct: 787 TKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 168/315 (53%), Gaps = 6/315 (1%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VSWN +I G A GL +EA N+ M L+PD FT S+L + + G+E+H
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ GL N +G++LI+MYAKC V D+ R+F + +D +SW ++ ++G E
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
LK + ML ++P +++ +++ AC L L GKQ+H I+ + ++ ++++L
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG ++ AR +F+ + D+++W +I G G +A +F +M K+ V P+ V
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVT 349
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++A+L+AC+ G + KD G+ A+ ++ +AG +++A + M
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408
Query: 306 HAGPTENV--WLTLL 318
P +V W L+
Sbjct: 409 ---PKRDVVSWTALV 420
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 178/361 (49%), Gaps = 33/361 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSW T+ A +G +E+L M ++P T +VL + KG
Sbjct: 206 MASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG 265
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + ++V + ++L MY KC V+D+ +F LP +D I+WN++I G V +
Sbjct: 266 KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDS 325
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E F +ML + P V++ +I+ ACA L GK++H +++G ++
Sbjct: 326 GQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFG 385
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+K G+++ AR +FD+M D+VSWTA++ G A G ++ S F++M + GV+
Sbjct: 386 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445
Query: 241 PNSVAFVAVLTACS-----------HAGLIDKA----WSYFNSMTKDYGIAPSFEHYAAV 285
N + ++ VL ACS HA ++ + N++ Y S E V
Sbjct: 446 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRV 505
Query: 286 ADLL------------------GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
++ + GR + + +E + + P ++ ++SACRV V
Sbjct: 506 SEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLV 565
Query: 328 E 328
E
Sbjct: 566 E 566
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 135/250 (54%), Gaps = 1/250 (0%)
Query: 13 IVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL 72
++ + +G Y A ++++ + + DS+ +L D+ GK++H + +R G+
Sbjct: 17 MIPTSTDGWYAPA-DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGM 75
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
NV I ++L+ +Y C V ++ RLF K +SWN +I+G GL E F
Sbjct: 76 KPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTL 135
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M ++P +F SI+ AC+ L+ G+++H ++ G +N + ++L+ MYAKCG+
Sbjct: 136 MQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGS 195
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+R AR +FD M D VSWT + A G A +++ + M ++GV+P+ + ++ VL+A
Sbjct: 196 VRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSA 255
Query: 253 CSHAGLIDKA 262
C ++K
Sbjct: 256 CGSLAALEKG 265
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/518 (42%), Positives = 330/518 (63%), Gaps = 6/518 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D VSWN++IV ++ +AL + ++M L D FTL+SVL F D+ G +
Sbjct: 202 IRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQ 261
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
HG I+ G N +GS LI++Y+KC + D ++F + D + WN++++G QN
Sbjct: 262 FHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNE 321
Query: 122 LF-DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFI 179
F ++ L+ FRQM +P SF ++ AC++L++ GKQ+H +++ N + +
Sbjct: 322 EFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISV 381
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY+KCGN++ AR +FD+M H+ VS ++I G A HG +++ LF+ M + +
Sbjct: 382 DNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 441
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P S+ F++VL+AC+H G +++ W+YFN M + + I P EHY+ + DLLGRAGKL EA
Sbjct: 442 APTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAE 501
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I+ M P W +LL ACR H N+ELA K A ++ ++P+N YV+LSN YA+A
Sbjct: 502 NLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAG 561
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW++ A++R FMR++G+KK P CSWIEVK + + FVA D SHP I E L+E+ +M+
Sbjct: 562 RWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMK 621
Query: 420 QEGYVPDTKEVL---HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ GYVPD + L +K+ L +HSE+LA+ FG+I T DG + ++KNLR+CGD
Sbjct: 622 RAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGD 681
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH AIKFIS I REI VRD RFH F++G+CSCGDYW
Sbjct: 682 CHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 141/258 (54%), Gaps = 5/258 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLVS+NT+I A G AL + M + L D FTLS+V+ D V +I
Sbjct: 100 IPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLI-- 157
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQ 119
++H A+ G D+ V + ++L+ Y K ++D+ R+F + ++D +SWNS+I Q
Sbjct: 158 GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQ 217
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + L F++M+ + + +S++ A L L G Q HG +I+ GF N +
Sbjct: 218 HQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHV 277
Query: 180 ASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKD 237
S L+D+Y+KC G + R +F+++ D+V W ++ G + + DA+ F QM+
Sbjct: 278 GSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 238 GVKPNSVAFVAVLTACSH 255
G +PN +FV V++ACS+
Sbjct: 338 GYRPNDCSFVCVISACSN 355
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D NV +++I YAK +R +H+LF +P D +S+N++I+ G L F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + + S+++ AC + L QLH + +GFD + + ++LL Y K G+
Sbjct: 131 MREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 193 IRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ A+ +F M + D VSW ++I+ H A+ LF++M + G+ + +VLT
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 252 A 252
A
Sbjct: 249 A 249
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 44/217 (20%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR------- 197
F ++ C L GK LH I++ + + ++ + +Y+KCG + AR
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 198 ------------------------CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+FD++ D+VS+ +I A G A+ LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 234 MEKDGVKPNSVAFVAVLTA-CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL--- 289
M + G+ + AV+TA C GLI + S ++ F+ Y +V + L
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHS--------VAVSSGFDSYVSVNNALLTY 182
Query: 290 -GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
G+ G L +A M E W +++ A H+
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 332/547 (60%), Gaps = 39/547 (7%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK----GKE 62
V+WN +I G R GLYEEA + R+M ++ ++ D +T +S++ + + G++
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQ 308
Query: 63 IHGYAIRHGLDAN----VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+HGY +R ++ + + + ++LI Y K R+ ++ R+F +PV+D ISWN++++G V
Sbjct: 309 VHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYV 368
Query: 119 -------------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
QNG +EGLK F QM ++P +F+
Sbjct: 369 NAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAG 428
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
+ AC+ L +L G+Q+H +IR G D + ++L+ MY++CG + A +F M D
Sbjct: 429 AITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVD 488
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
VSW A+I A HG+ AI LFEQM K+ + P+ + F+ +LTAC+HAGLI + YF+
Sbjct: 489 SVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFD 548
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
+M YGI P +HYA + DLL RAG +A I +M +W LL+ CR+H N+
Sbjct: 549 TMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNM 608
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
EL + A+++ + P G Y+ILSN YAA +W + A +R+ MR +G+KK P CSW+EV
Sbjct: 609 ELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEV 668
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
+N + F+ D HP + L++L+ M++ GYVPDTK VLHD+E E K++ L HS
Sbjct: 669 ENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHS 728
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LA+V+GI+ P G TIR+ KNLR+CGDCH A K+ISK+V+REI+VRD RFHHF++G+
Sbjct: 729 EKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGE 788
Query: 508 CSCGDYW 514
CSCG+YW
Sbjct: 789 CSCGNYW 795
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++++W +I GLA+NG EE L + QM + L+P + + + + + G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH IR G D+ + G++LI MY++C VE + +F +P D++SWN++IA Q+
Sbjct: 443 QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQH 502
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G + ++ F QM+ I P ++F +I+ AC H + G+ + R G
Sbjct: 503 GHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDH 562
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQM 234
+ L+D+ + G A+ + M W A++ G +HGN I +++
Sbjct: 563 YARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRL 618
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 141/344 (40%), Gaps = 82/344 (23%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + D VS+N +I + ALN+ QM PD FT SSVL + D +
Sbjct: 99 LTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERH 158
Query: 61 -KEIHGYAIRHG-----------LDANVCIGSSLI------------------------- 83
+ +H I+ G L VC SS +
Sbjct: 159 CQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEP 218
Query: 84 ---NMYAKCARVED---SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
M A R +D + L L ++WN++I+G V+ GL++E FR+M
Sbjct: 219 SWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMG 278
Query: 138 IKPRHVSFSSIMPACA----HLTTLHLGKQLHGCIIRNGFDDN----MFIASSLLDMYAK 189
I+ +++S++ AC + + G+Q+HG I+R + + + + ++L+ Y K
Sbjct: 279 IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTK 338
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAV-------------------------------IMGN 218
+ AR +FDKM + DI+SW AV I G
Sbjct: 339 YDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGL 398
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
A +G + + LF QM+ +G++P AF +TACS G +D
Sbjct: 399 AQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
TT + + +H I+ +GF N FI + L+++Y K NI AR +FDK+ DIV+ T ++
Sbjct: 19 TTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLL 78
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ GN A LF ++V++ A++TA SH A + F M K YG
Sbjct: 79 SAYSSSGNVKLAQQLFNATPL--TIRDTVSYNAMITAYSHGNDGHAALNLFVQM-KRYGF 135
Query: 276 APSFEHYAAVADLL 289
P +++V L
Sbjct: 136 LPDPFTFSSVLSAL 149
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
KP++F L+ ++ I+ ++ +++ + ++ ++L++ Y+ V+ +
Sbjct: 36 FKPNTFILNRLINIYCKSSNITYARKLFDKIPK----PDIVARTTLLSAYSSSGNVKLAQ 91
Query: 97 RLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+LF P ++D +S+N++I L F QM P +FSS++ A +
Sbjct: 92 QLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSL 151
Query: 155 LTTLHLGKQLHGC-IIRNGFDDNMFIASSLLDMYAKCGNIRL---------ARCIFDKMD 204
+ Q+ C +I+ G + ++LL Y C + L AR +FD+
Sbjct: 152 IADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETP 211
Query: 205 LHDIV--SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ I SWT +I G + + A L + + P VA+ A+++ GL ++A
Sbjct: 212 KNQIYEPSWTTMIAGYVRNDDLVAARELLDGL----TYPIDVAWNAMISGYVRRGLYEEA 267
Query: 263 WSYFNSM 269
+ F M
Sbjct: 268 FDTFRRM 274
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/518 (42%), Positives = 330/518 (63%), Gaps = 6/518 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D VSWN++IV ++ +AL + ++M L D FTL+SVL F D+ G +
Sbjct: 202 IRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQ 261
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
HG I+ G N +GS LI++Y+KC + D ++F + D + WN++++G QN
Sbjct: 262 FHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNE 321
Query: 122 LF-DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFI 179
F ++ L+ FRQM +P SF ++ AC++L++ GKQ+H +++ N + +
Sbjct: 322 EFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISV 381
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY+KCGN++ AR +FD+M H+ VS ++I G A HG +++ LF+ M + +
Sbjct: 382 DNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 441
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P S+ F++VL+AC+H G +++ W+YFN M + + I P EHY+ + DLLGRAGKL EA
Sbjct: 442 APTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAE 501
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I+ M P W +LL ACR H N+ELA K A ++ ++P+N YV+LSN YA+A
Sbjct: 502 NLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAG 561
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW++ A++R FMR++G+KK P CSWIEVK + + FVA D SHP I E L+E+ +M+
Sbjct: 562 RWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMK 621
Query: 420 QEGYVPDTKEVL---HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ GYVPD + L +K+ L +HSE+LA+ FG+I T DG + ++KNLR+CGD
Sbjct: 622 RAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGD 681
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH AIKFIS I REI VRD RFH F++G+CSCGDYW
Sbjct: 682 CHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 141/258 (54%), Gaps = 5/258 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLVS+NT+I A G AL + M + L D FTLS+V+ D V +I
Sbjct: 100 IPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLI-- 157
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQ 119
++H A+ G D+ V + ++L+ Y K ++D+ R+F + ++D +SWNS+I Q
Sbjct: 158 GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQ 217
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + L F++M+ + + +S++ A L L G Q HG +I+ GF N +
Sbjct: 218 HQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHV 277
Query: 180 ASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKD 237
S L+D+Y+KC G + R +F+++ D+V W ++ G + + DA+ F QM+
Sbjct: 278 GSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 238 GVKPNSVAFVAVLTACSH 255
G +PN +FV V++ACS+
Sbjct: 338 GYRPNDCSFVCVISACSN 355
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D NV +++I YAK +R +H+LF +P D +S+N++I+ G L F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + + S+++ AC + L QLH + +GFD + + ++LL Y K G+
Sbjct: 131 MREMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 193 IRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ A+ +F M + D VSW ++I+ H A+ LF++M + G+ + +VLT
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 252 A 252
A
Sbjct: 249 A 249
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 44/217 (20%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR------- 197
F ++ C L GK LH I++ + + ++ + +Y+KCG + AR
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 198 ------------------------CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+FD++ D+VS+ +I A G A+ LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 234 MEKDGVKPNSVAFVAVLTA-CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL--- 289
M + G+ + AV+TA C GLI + S ++ F+ Y +V + L
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHS--------VAVSSGFDSYVSVNNALLTY 182
Query: 290 -GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
G+ G L +A M E W +++ A H+
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/516 (43%), Positives = 319/516 (61%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V D+VSWN +I G ++EAL + + M N+KPD T+ +V+ A + G
Sbjct: 157 ISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELG 216
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I + LI++Y+KC VE + LF L KD ISWN++I G
Sbjct: 217 RQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHM 276
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ S++PACAHL + +G+ +H I + G +
Sbjct: 277 NLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASS 336
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A+ +FD M + SW A+I G A+HG A+ A LF +M K+G
Sbjct: 337 LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNG 396
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ + FV +L+ACSH+G++D F SM++DY I P EHY + DLLG G +EA
Sbjct: 397 IDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEA 456
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I M P +W +LL AC++H NVEL A+ + I+P N G+YV+LSN YA A
Sbjct: 457 KEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATA 516
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW A +R + +KG+KK P CS IE+ + + F+ GDK HP I L+E+ M
Sbjct: 517 GRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLM 576
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 577 EETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 636
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +R H +DG SC DYW
Sbjct: 637 EATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 193/382 (50%), Gaps = 35/382 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A N AL + M ++ L P+S++ +L A +I+G++IH
Sbjct: 29 NLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIH 88
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------------- 96
G+ ++ G D ++ + +SLI+MYA+ R+ED+H
Sbjct: 89 GHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYIN 148
Query: 97 ---RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+LF + VKD +SWN++I+G V+ F E L+ ++ M+ +KP + +++ ACA
Sbjct: 149 NARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACA 208
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+QLH I +GF N+ I + L+D+Y+KCG + A +F + D++SW
Sbjct: 209 QSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNT 268
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKD 272
+I G+ +A+ LF++M + G PN V ++VL AC+H G ID W + +
Sbjct: 269 LIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRL 328
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
G+ + ++ D+ + G ++ A + +M + W ++ +H A
Sbjct: 329 KGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS-WNAMIFGFAMHGKANAAFD 387
Query: 333 VAEKIFM--IDPNNMGAYVILS 352
+ K+ IDP+++ +LS
Sbjct: 388 LFSKMRKNGIDPDDITFVGLLS 409
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 32/232 (13%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F + + + WN++ G N LK + M+ + P SF ++ +CA
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN------------------------- 192
L G+Q+HG +++ G+D +M++ +SL+ MYA+ G
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 193 ------IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
I AR +FD++ + D+VSW A+I G N +A+ L++ M K VKP+
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V V++AC+ +G I+ +S +D+G + + + DL + G+++ A
Sbjct: 201 VTVVSACAQSGSIELG-RQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/549 (41%), Positives = 341/549 (62%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M D+V+WN++I G + G AL++ +M + L PD FTL+SVL A+ +
Sbjct: 238 MAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCI 297
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--------------------- 98
G++IH + + G D + + ++LI+MY++C VE + RL
Sbjct: 298 GEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 99 ------------FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
F L +D ++W ++I G Q+GL+ E + FR M+ + +P + +
Sbjct: 358 IKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLA 417
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ + L +L GKQ+HG +++G ++ ++++L+ MYAK G+I A FD +
Sbjct: 418 AMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCE 477
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D VSWT++I+ A HG+A +A+ LFE M +G++P+ + +V V +AC+HAGL+++ Y
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F+ M I P+ HYA + DL GRAG LQEA EFI M P W +LLSACRV+K
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYK 597
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N++L AE++ +++P N GAY L+N Y+A +W++AA +R M++ +KK SWI
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
EVK+K +AF D HP + I +K++ + +++ GYVPDT VLHD+EEE K+ +L +
Sbjct: 658 EVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TPD TT+RI+KNLRVC DCHTAIKFISK+V REIIVRD +RFHHF+D
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 181/404 (44%), Gaps = 66/404 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D VSW T+IVG G Y +A+ I+ +M ++P FTL++VL A + G
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETG 165
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + ++ GL NV + +SL+NMYAKC + +F + VKD SWN++IA +Q
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQV 225
Query: 121 GLFDEGLKFFRQM--------------------------LIAK------IKPRHVSFSSI 148
G D + F QM + +K + P + +S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASV 285
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR----------- 197
+ ACA+L L +G+Q+H I+ GFD + + ++L+ MY++CG + AR
Sbjct: 286 LSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 198 ----------------------CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
IFD + D+V+WTA+I+G HG +AI+LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV 405
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ +PNS A+L+ S + S K G S A+ + +AG +
Sbjct: 406 GEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGSI 464
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM 339
A + W +++ A H + E A ++ E + M
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 117/207 (56%), Gaps = 6/207 (2%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++++ YAK ++ S F LP +D++SW ++I G G + + ++ +M+ I+
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P + ++++ + A L GK++H I++ G N+ +++SLL+MYAKCG+ +A+ +
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGL 258
FD+M + DI SW A+I + G A++ FEQM E+D V NS +++ + G
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS-----MISGYNQRGY 258
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A F+ M +D ++P A+V
Sbjct: 259 DLRALDMFSKMLRDSMLSPDRFTLASV 285
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 39/154 (25%)
Query: 140 PRHVSFSSIMPACAHLTTLHLGK-------QLHGC-IIRNGFDDNMFIASSLLDMYAKCG 191
P +S S+++ C +L + K QL C +I++G ++++ ++L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 192 NIRLARCIFDKMDLH-------------------------------DIVSWTAVIMGNAL 220
AR +FD+M L D VSWT +I+G
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
G H AI + +M ++G++P+ VL + +
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVA 157
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 326/515 (63%), Gaps = 22/515 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G R+G + A+ +++QM +K D ++S+L A + G
Sbjct: 312 MGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + +++N+ + ++L++MYAKC +E ++ +F + VKD ISWN+
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNT-------- 423
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+I ++KP + + ++PACA L+ L GK++HG I+RNG+ + +A
Sbjct: 424 -------------MIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y KCG + LAR +FD + D+VSWT +I G +HG ++AI+ F +M G++
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+++ W +F M D+ I P EHYA + DLL R G L +AYE
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + P +W LL CR + ++ELA KVAE++F ++P N G YV+L+N YA A +
Sbjct: 591 FIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEK 650
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG-DKSHPFYHRINEALKELLERME 419
W++ LR + +G++K P CSWIE+K K FV+G + SHP I LK++ +M+
Sbjct: 651 WEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EG+ P TK L + +E QK+ L HSE+LA+ FG++ P TIR+ KNLRVCGDCH
Sbjct: 711 EEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 770
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK +REI++RD +RFHHF+DG CSC +W
Sbjct: 771 MAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 164/355 (46%), Gaps = 62/355 (17%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+ +N I+ + G E A+ ++ L+ ++ SSVL + A GK++H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCKKSELETKTY--SSVLQLCAGLKSFTDGKKVHS 123
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-------------------------- 99
+ + + +G L++ YA C +++ R+F
Sbjct: 124 IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 100 --CLLPV-----------------------KDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
CL + +D ISWNS+I+G V NGL + GL ++QM+
Sbjct: 184 SICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
I + S++ CA+ TL LGK +H I++ F+ + +++LLDMY+KCG++
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F+KM ++VSWT++I G G + AI L +QMEK+GVK + VA ++L AC+
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISNM 305
+G +D DY A + E A+ D+ + G ++ A S M
Sbjct: 364 RSGSLDNGKD-----VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/517 (43%), Positives = 323/517 (62%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP D SW+ ++ R+G AL I R+M + + FT SS L
Sbjct: 119 MPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCA 178
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+E+H + +R G+DA+ + S+L +MYAK R++D+ +F +PV+D +SW +++
Sbjct: 179 RAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRY 238
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
G EG + F +M+ + I P +++ ++ ACA T+ LGKQ+HG + ++ D+
Sbjct: 239 FDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSC 298
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F S+L+ MY+K G++ A +F M D+VSWTA+I G A +G +A+ F+ +
Sbjct: 299 FAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSS 358
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G +P+ V FV VL+AC+HAGL+DK F+S+ YGI + +HYA V DLL R+G +
Sbjct: 359 GFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFER 418
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + I+ M P + +W +LL CR+HKNV LA AE +F I+P N YV L+N YA+
Sbjct: 419 AEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYAS 478
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+ + ++R M +G+ K PA SWIEV + + F+ GDKSHP I LK+L +
Sbjct: 479 VGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVK 538
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M +EGYV DT VLHDVE+EQK+ + YHSERLA+ FGII TP G+ I++ KNLR+CGDC
Sbjct: 539 MREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDC 598
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK ISKIVQREIIVRD++RFHHF++G CSC DYW
Sbjct: 599 HTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 75 NVCIGSSLINMYAKCARVEDSHR-LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
+VC ++L+ + R S R LF +P +D SW++I++ V++G L +R+M
Sbjct: 91 DVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRM 150
Query: 134 LI---AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
L + SS + A G++LH ++R G D + + S+L DMYAK
Sbjct: 151 LREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKF 210
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G + AR +FD+M + D+VSWTA++ G + LF +M + G+ PN + VL
Sbjct: 211 GRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVL 270
Query: 251 TACS 254
AC+
Sbjct: 271 RACA 274
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 58/234 (24%)
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD------------------ 237
AR +FD+M D SW+A++ + HG A++++ +M ++
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAA 171
Query: 238 --------------------GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
G+ ++V + A+ + G +D A S F+ M ++
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVS- 230
Query: 278 SFEHYAAVADLLGRAGKLQEAYE-FISNMHAG--PTENVWLTLLSACRVHKNVELAGKVA 334
+ A+ D AG+ E + F+ M +G P E + +L AC + +L +V
Sbjct: 231 ----WTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVH 286
Query: 335 EKIFMIDPNNM----GAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
++ + A V + + Y ++RVF +GM K SW
Sbjct: 287 GRMAKSRTGDSCFAGSALVHMYSKYGDM-----GTAMRVF---RGMPKPDLVSW 332
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 330/543 (60%), Gaps = 35/543 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V+WN +I G G YEEA +++R+M ++ ++ D +T +SV+ ++ G+++H Y
Sbjct: 240 VAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAY 299
Query: 67 AIRHGLDAN----VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV---- 118
+R + + + + ++LI +Y +C ++ ++ R+F +PVKD +SWN+I++GCV
Sbjct: 300 VLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARR 359
Query: 119 ---------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
QNG +EGLK F QM + ++P +++ + +
Sbjct: 360 IEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIAS 419
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C+ L +L G+QLH II+ G D ++ + ++L+ MY++CG + A +F M D VSW
Sbjct: 420 CSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSW 479
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I A HG+ AI L+E+M K+ + P+ + F+ +L+ACSHAGL+ + YF++M
Sbjct: 480 NAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRV 539
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
YGI P +HY+ + DLL RAG EA +M P +W LL+ C +H N+EL
Sbjct: 540 CYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGI 599
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
+ A+++ + P G Y+ LSN YAA +W + A +R MR +G+KK P CSWIEV+N
Sbjct: 600 QAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMV 659
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ D HP H + L++L+ M + GYVPDTK VLHD+E EQK+ L HSE+LA
Sbjct: 660 HVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLA 719
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
+V+GI+ P G TIR+ KNLR+CGDCH A K+ISK+V REIIVRD RFHHF +G+CSC
Sbjct: 720 VVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCS 779
Query: 512 DYW 514
+YW
Sbjct: 780 NYW 782
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV L++W +I GLA+NG EE L + QM L+P + + + + + G
Sbjct: 370 MPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNG 429
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H I+ G D+++ +G++LI MY++C VE + +F +P D++SWN++IA Q+
Sbjct: 430 QQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQH 489
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G + ++ + +ML I P ++F +I+ AC+H + G+ + + G
Sbjct: 490 GHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDH 549
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAIS----LFEQM 234
S L+D+ + G A+ + + M W A++ G +HGN I L E M
Sbjct: 550 YSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELM 609
Query: 235 -EKDGV 239
++DG
Sbjct: 610 PQQDGT 615
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 180/432 (41%), Gaps = 82/432 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV-IK 59
M + D VS+N +I + + AL + QM + PD FT SSVL + D
Sbjct: 90 MSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETH 149
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCAR---------VEDSHRLFCLLP------- 103
+++H + G + + ++L++ Y CA + + +LF P
Sbjct: 150 CQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEP 209
Query: 104 ---------VKD-----------------AISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
V++ A++WN++I+G V G ++E R+M
Sbjct: 210 AWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLG 269
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN----MFIASSLLDMYAKCGNI 193
I+ +++S++ A ++ ++G+Q+H ++R + + + ++L+ +Y +CG +
Sbjct: 270 IQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKL 329
Query: 194 RLARCIFDKMDLHDIVSWTAV-------------------------------IMGNALHG 222
AR +FDKM + D+VSW A+ I G A +G
Sbjct: 330 VEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNG 389
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+ + LF QM+ +G++P A+ + +CS G +D +S G S
Sbjct: 390 FGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNG-QQLHSQIIQLGHDSSLSVG 448
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID- 341
A+ + R G ++ A M + + W +++A H + A ++ EK+ D
Sbjct: 449 NALITMYSRCGLVEAADTVFLTMPYVDSVS-WNAMIAALAQHGHGVQAIQLYEKMLKEDI 507
Query: 342 -PNNMGAYVILS 352
P+ + ILS
Sbjct: 508 LPDRITFLTILS 519
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 137/360 (38%), Gaps = 40/360 (11%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A L+ + +H I+ +GF I + L+D Y K NI AR +FDK+ DIV+ T
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ + GN A LF ++V++ A++TA SH+ A F M K
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMS--IRDTVSYNAMITAFSHSHDGHAALQLFVQM-KR 123
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH---------AGPT-----ENVWLTLL 318
G P +++V LG + + +H + P+ + +++
Sbjct: 124 LGFVPDPFTFSSV---LGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 319 SACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKK 378
S+ V+ V +A A K+F P + A R D + R + +GM
Sbjct: 181 SSPLVNSCVLMAA--ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELL--EGMTD 236
Query: 379 TPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ 438
A +W A ++G FY E +LL RM G D +
Sbjct: 237 HIAVAW-------NAMISGYVHRGFY----EEAFDLLRRMHSLGIQLDEYTYTSVISAAS 285
Query: 439 KKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV-----CGDCHTAIKFISKIVQREII 493
L + A V + P G + + N + CG A + K+ ++++
Sbjct: 286 NAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLV 345
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 325/514 (63%), Gaps = 5/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I ++ ++++AL ++ M N++P+ +T SSVL DV
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--- 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H I+ GL+++V + S+LI+++AK ED+ +F + DAI WNSII G QN
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D L+ F++M A + +S++ AC L L LG Q H I++ +D ++ +
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG++ A +F++M D+++W+ +I G A +G + +A+ LFE+M+ G K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V VL ACSHAGL++ W YF SM K YGI P EHY + DLLG+AGKL +A +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P W TLL ACRV +N+ LA A+K+ +DP + G Y +LSN YA +++
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR++G+KK P CSWIEV + +AF+ GD SHP +++ L +L+ R+
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL D+E EQ ++ L +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVF 596
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K SK+ R I++RD R+HHF+DGKCSCGDYW
Sbjct: 597 CKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 132/257 (51%), Gaps = 9/257 (3%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LINMY K + D+H+LF +P ++ ISW ++I+ + + + L+ ML ++P
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++SS++ +C ++ + + LH II+ G + ++F+ S+L+D++AK G A +FD
Sbjct: 162 VYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M D + W ++I G A + + A+ LF++M++ G +VL AC+ L++
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 262 AWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ K D + + A+ D+ + G L++A + M W T++S
Sbjct: 279 GMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKERDV-ITWSTMISG 333
Query: 321 CRVHKNVELAGKVAEKI 337
+ + A K+ E++
Sbjct: 334 LAQNGYSQEALKLFERM 350
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/515 (43%), Positives = 329/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+V +NT+ G AR A+ + Q+ L PD +T SS+L A + +G
Sbjct: 95 IPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEG 154
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ G+ N+ + +LINMY C V+ + R+F + +++N+II C +N
Sbjct: 155 KQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARN 214
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FR++ + +KP V+ + +CA L L LG+ +H + +NGFD + +
Sbjct: 215 SRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVN 274
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++ A +F M D +W+A+I+ A HG+ AIS+ +M+K V+
Sbjct: 275 TALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQ 334
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH GL+++ + YF+SMT +YGI PS +HY + DLLGRAG+L+EA +
Sbjct: 335 PDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACK 394
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W TLLS+C H NVE+A V ++IF +D ++ G YVILSN A R
Sbjct: 395 FIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGR 454
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D LR M +KG K P CS IEV N + F +GD H ++ AL EL++ ++
Sbjct: 455 WDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKL 514
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT V + D+E+E+K+ +L YHSE+LAI +G++ TP GTTIR++KNLRVC DCH
Sbjct: 515 AGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHN 574
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS I R+II+RD RFHHF+DGKCSCGDYW
Sbjct: 575 AAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A ++P S S++P C L L KQ+ I+ +N + + L++ I
Sbjct: 29 AALEPPSSSILSLIPKCTSLREL---KQIQAYTIKT-HQNNPTVLTKLINFCTSNPTIAS 84
Query: 196 ---ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
A +FDK+ DIV + + G A + AI L Q+ G+ P+ F ++L A
Sbjct: 85 MDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144
Query: 253 CS 254
C+
Sbjct: 145 CA 146
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/514 (42%), Positives = 317/514 (61%), Gaps = 28/514 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D VSWN++IVG R GL EEAL++ R M ++K D FT SVL F+ +D+
Sbjct: 301 MEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNA 360
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H ++ G +A + ++L++MYAK + + +F + KD ISW S++ GCV N
Sbjct: 361 MSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 420
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E L+ F +M I I P + ++++ ACA LT L GKQ+H +++G ++ +
Sbjct: 421 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 480
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MYAKCG I A +FD M++ D+++WTA+I+G A +G D
Sbjct: 481 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD-------------- 526
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
HAGL++ SYF SM + YGI P EHYA + DLLGR+GKL EA E
Sbjct: 527 --------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 572
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P VW LL+ACRVH NVEL + A +F ++P N YV+LSN Y+AA +
Sbjct: 573 LLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGK 632
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++AA R M+ +G+ K P CSWIE+ +K + F++ D+SHP I + E++ +++
Sbjct: 633 WEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKE 692
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD LHD++EE K+ L YHSE+LA+ FG++ P G IRI KNLR+CGDCHTA
Sbjct: 693 AGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTA 752
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K++S + R +I+RD++ FHHF +G CSC DYW
Sbjct: 753 MKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 191/358 (53%), Gaps = 13/358 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P+ ++W+++I G R G EAL + +M +P+ FT SVL + + YV + KGK
Sbjct: 99 PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGK 158
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQN 120
+IH +AI+ D+N + + L++MYAKC + ++ LF L P K + + W +++ G QN
Sbjct: 159 QIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQN 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + ++ FR M I+ +F SI+ AC ++ G Q+HGCI+R+GF N+F+
Sbjct: 219 GDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVG 278
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY+KCG++ AR + + M++ D VSW ++I+G G +A+SLF M +K
Sbjct: 279 SALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMK 338
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQ 296
+ + +VL S + A S + + K FE Y A+ D+ + G
Sbjct: 339 IDEFTYPSVLNCFSFVMDMRNAMSVHSLIVK-----TGFEAYKLVNNALVDMYAKRGYFD 393
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV--AEKIFMIDPNNMGAYVILS 352
A++ M + W +L++ C + + E A ++ +I I P+ + +LS
Sbjct: 394 YAFDVFEKMTDKDVIS-WTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 450
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 160/299 (53%), Gaps = 1/299 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V W ++ G ++NG +A+ R M ++ + FT S+L G ++HG
Sbjct: 206 VLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGC 265
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R G ANV +GS+L++MY+KC + ++ R+ + V D +SWNS+I GCV+ GL +E
Sbjct: 266 IVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEA 325
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L FR M + +K ++ S++ + + + +H I++ GF+ + ++L+DM
Sbjct: 326 LSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDM 385
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAK G A +F+KM D++SWT+++ G +G+ +A+ LF +M G+ P+ +
Sbjct: 386 YAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 445
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
AVL+AC+ +++ + K G+ S ++ + + G +++A + +M
Sbjct: 446 AAVLSACAELTVLEFGKQVHANFLKS-GLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 503
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D + C +++I YA R+ ++ +LF P++ I+W+S+I+G + G E L+ F +
Sbjct: 69 DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M +P ++ S++ C+ L GKQ+H I+ FD N F+ + L+DMYAKC
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188
Query: 193 IRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
I A +F+ D + V WTA++ G + +G+ H AI F M +G++ N F ++LT
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
AC + + G + +A+ D+ + G L A + M
Sbjct: 249 ACGSISACGFGAQVHGCIVRS-GFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPV 307
Query: 312 NVWLTLLSAC 321
+ W +++ C
Sbjct: 308 S-WNSMIVGC 316
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 320/513 (62%), Gaps = 9/513 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +I G +NG A + +M + P+ FT S++L + +IH
Sbjct: 372 NVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLP----PQIH 427
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ + +G++L+ Y+K E++ +F ++ KD +SW++++ Q G D
Sbjct: 428 AQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSD 487
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSL 183
F +M + +KP + SS++ ACA T + LG+Q H I++ D + ++S+L
Sbjct: 488 GATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSAL 547
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MYA+ G+I A+CIF++ D+VSW +++ G A HG + A+ +F QME +G++ +
Sbjct: 548 VSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDG 607
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F++V+ C+HAGL+++ YF+SM +DYGI P+ EHYA + DL RAGKL EA I
Sbjct: 608 VTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIE 667
Query: 304 NMH--AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
M AGP VW TLL AC+VHKNVEL AEK+ ++P + YV+LSN Y+AA +W
Sbjct: 668 GMSFPAGPM--VWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKW 725
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
K+ +R M K +KK CSWI++KNK ++F+A DKSHP +I L+ + +++QE
Sbjct: 726 KEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQE 785
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT LH+V EEQK+ +L HSERLA+ FG+I TP G + I KNLRVCGDCHT I
Sbjct: 786 GYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVI 845
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SKI REI++RD SRFHHF G CSCGD+W
Sbjct: 846 KMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 145/253 (57%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W +++ G ++G + + + +M + P+S T +SVL + A V G
Sbjct: 165 MPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLG 224
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +++ G + V + +SL+NMYAKC VE++ +FC + +D +SWN+++AG V N
Sbjct: 225 RRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLN 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F + ++++++ CA++ L L +QLH +++ GF +
Sbjct: 285 GHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVM 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+D Y+K G + A IF M ++VSWTA+I G +G+ A +LF +M +DGV
Sbjct: 345 TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGV 404
Query: 240 KPNSVAFVAVLTA 252
PN + +LTA
Sbjct: 405 APNDFTYSTILTA 417
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 159/317 (50%), Gaps = 4/317 (1%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLL 102
L VL + D + GK++HG IR G D +V +G+SL++MY K V D ++F +
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM 165
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P ++ ++W S++ G +Q+G + ++ F +M + P V+F+S++ A + LG+
Sbjct: 166 PKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGR 225
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
++H ++ G +F+ +SL++MYAKCG + AR +F M+ D+VSW ++ G L+G
Sbjct: 226 RVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNG 285
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+ +A+ LF + V+ C++ + A +S+ K G
Sbjct: 286 HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLK-RGFHSYGNVM 344
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--I 340
A+ D +AG+L A + M W +++ C + +V LA + ++ +
Sbjct: 345 TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGV 404
Query: 341 DPNNMGAYVILSNTYAA 357
PN+ IL+ + A+
Sbjct: 405 APNDFTYSTILTASVAS 421
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/480 (43%), Positives = 313/480 (65%), Gaps = 1/480 (0%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
NL+PD T+ S++P A ++ +GK +H Y+ GLD N+ + +++++MY KC +E +
Sbjct: 6 NLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESA 65
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F + KD +SW S+++G ++G F E L FR+M + KI+P ++ ++ ACA
Sbjct: 66 QEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQT 125
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L GK +H I + + ++ + ++L+DMYAKCG+I LA +F +M + ++ +W A+I
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G A+HG+ DAISLF+QME D + P+ V F+A+L ACSHAGL+D+ + F +M + I
Sbjct: 186 GGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQI 245
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
P EHY V DLL RA K+ +A FI NM +W TLL ACR + +LA K+
Sbjct: 246 EPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXR 305
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
++ ++P++ G YV+LSN YA +W A LR M+NKG++KTP CSWIE+ + FV
Sbjct: 306 RVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFV 365
Query: 396 AGDKSHPFYHRINEALKELLERMEQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
AGD+SH +I ++E+ R+ + G+VP T VL D+EEE+K++ L+ HSE+LAI
Sbjct: 366 AGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIAL 425
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
G+I TP G+ IRI+KNLRVC DCH+ +K SK+ REI+ RD SRFHHF++G CSC D+W
Sbjct: 426 GLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++ +WN +I GLA +G E+A+++ QM L PD T ++L + V +G
Sbjct: 173 MRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEG 232
Query: 61 KEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
+ + + I ++ C+ +++ + +V+D+ +P+K +++ W +++
Sbjct: 233 LAMFQAMKNKFQIEPRMEHYGCV----VDLLCRARKVDDALAFIENMPIKANSVLWATLL 288
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKP----RHVSFSSIMPACAHLT-TLHLGKQL 164
C G FD K R+++ +++P R+V S++ + L L KQ+
Sbjct: 289 GACRSGGHFDLAEKIXRRVI--ELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 341
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/508 (43%), Positives = 317/508 (62%), Gaps = 1/508 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+W++VI A+N A+ +M NL PD S A GK +H
Sbjct: 121 TTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCL 180
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
I+ G D +V +GSSL++MYAKC ++++ +F +P ++ +SW+ +I G Q G +E
Sbjct: 181 VIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEA 240
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ F++ L+ + + SS++ C T L LGKQ+HG + +D + F+ SSL+ +
Sbjct: 241 MRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISL 300
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y+KCG I A +FD++ + ++ W A+++ A H + +A LF +ME G++PN + F
Sbjct: 301 YSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITF 360
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ VL ACSHAGL+++ YF ++ K Y I P +HYA++ DLLGRAGKLQEA I M
Sbjct: 361 LCVLYACSHAGLVEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMP 419
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
PTE+VW ++ CR+H N +LA A+K+F + + G +V+LSN YAAA R++DAA
Sbjct: 420 TEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAK 479
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
R +R++G+KK SWIE N+ + F AGD+ H I + L++L E ME+ GYV D
Sbjct: 480 ARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVAD 539
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T VL +V E+K + YHSERLAI FG+I P G IRI+KNLRVCGDCH AIKFISK
Sbjct: 540 TSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISK 599
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ R IIVRDN+RFH FEDGKCSC DYW
Sbjct: 600 LSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
++KG++IH + I+ GL + LIN Y+K S ++F K + +W+S+I+
Sbjct: 70 LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISS 129
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
QN +++F +M+ + P F S ACA L +GK +H +I+ G+D +
Sbjct: 130 FAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVD 189
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ SSL+DMYAKCG+I+ AR +FD+M ++VSW+ +I G G +A+ LF++
Sbjct: 190 VFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALL 249
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G+ N +V+ C A L++ K F +++ L + G ++
Sbjct: 250 EGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVG-SSLISLYSKCGLIE 308
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
AY + P +N+ W +L AC H + + A
Sbjct: 309 GAYRVFDEV---PIKNLGMWNAMLIACAQHAHTKEA 341
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 119/225 (52%), Gaps = 1/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G + G +EEA+ + ++ L + FTLSSV+ + + G
Sbjct: 216 MPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELG 275
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG + D + +GSSLI++Y+KC +E ++R+F +P+K+ WN+++ C Q+
Sbjct: 276 KQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQH 335
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E F +M A ++P ++F ++ AC+H + GK+ + + +
Sbjct: 336 AHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHY 395
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNA 224
+S++D+ + G ++ A + M S W A I G +HGN
Sbjct: 396 ASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNT 440
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/549 (41%), Positives = 338/549 (61%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M D+VSWN++I G G AL M + +LKPD FTL SVL A+ +
Sbjct: 237 MTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKL 296
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--------------------- 98
GK+IH + +R +D +G++LI+MYAK VE +HR+
Sbjct: 297 GKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGY 356
Query: 99 ------------FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
F L +D ++W ++I G QNGL + L FR M+ KP + + +
Sbjct: 357 FKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLA 416
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-DL 205
+++ + L +L GKQLH IR ++ + ++L+ MY++ G+I+ AR IF+ +
Sbjct: 417 AVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSY 476
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D ++WT++I+ A HG ++AI LFE+M + +KP+ + +V VL+AC+H GL+++ SY
Sbjct: 477 RDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSY 536
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
FN M + I P+ HYA + DLLGRAG L+EAY FI NM P W +LLS+CRVHK
Sbjct: 537 FNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHK 596
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
V+LA AEK+ +IDPNN GAY+ L+NT +A +W+DAA +R M++K +KK SW+
Sbjct: 597 YVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWV 656
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
++KNK + F D HP I + ++ + +++ G++PDT VLHD+E+E K+ +L +
Sbjct: 657 QIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRH 716
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI F +I TP TT+RI+KNLRVC DCH+AI++IS +V+REIIVRD +RFHHF+D
Sbjct: 717 HSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKD 776
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 777 GSCSCQDYW 785
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 195/425 (45%), Gaps = 80/425 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D VSW T+IVG GL++ A++ +M + + P FT ++VL A + G
Sbjct: 105 IPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA------------RVEDS---------HRLF 99
K++H + ++ G V + +SL+NMYAKC R++D+ H F
Sbjct: 165 KKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQF 224
Query: 100 CLLPV----------KDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
C + D +SWNSII G G L+ F ML + +KP + S+
Sbjct: 225 CQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSV 284
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDD--------------------------------- 175
+ ACA+ +L LGKQ+H I+R D
Sbjct: 285 LSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSL 344
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ +SLLD Y K G+I AR IFD + D+V+WTA+I+G A +G DA+ LF M
Sbjct: 345 NVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMI 404
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA------DLL 289
++G KPN+ AVL+ S +D + + +A E ++V+ +
Sbjct: 405 REGPKPNNYTLAAVLSVISSLASLDHG-------KQLHAVAIRLEEVSSVSVGNALITMY 457
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID--PNNMGA 347
R+G +++A + +++ + W +++ + H A ++ EK+ I+ P+++
Sbjct: 458 SRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITY 517
Query: 348 YVILS 352
+LS
Sbjct: 518 VGVLS 522
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 36/254 (14%)
Query: 56 DVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--------- 105
D G+ IH I+HGL V + ++L+N+Y K D+HRLF +P+K
Sbjct: 27 DPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTIL 86
Query: 106 ----------------------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHV 143
D++SW ++I G GLF + F +M+ + I P
Sbjct: 87 SAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQF 146
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+F++++ +CA L +GK++H +++ G + +A+SLL+MYAKCG+ +A+ +FD+M
Sbjct: 147 TFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRM 206
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
L D +W +I + A++LF+QM P+ V++ +++T H G +A
Sbjct: 207 RLKDTSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWNSIITGYCHQGYDIRAL 262
Query: 264 SYFNSMTKDYGIAP 277
F+ M K + P
Sbjct: 263 ETFSFMLKSSSLKP 276
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 95 SHRLFCLLPVKDAI-SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
SH C+ ++ AI S + I C+ + GL++ L + +V S A
Sbjct: 10 SHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHR 69
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L F +++L +AK GN+ AR +FD++ D VSWT
Sbjct: 70 LFDEMPL--------------KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTT 115
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+I+G G A+ F +M G+ P F VL +C+ A +D
Sbjct: 116 MIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALD 162
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 314/514 (61%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW +I G G Y L I QM P+ +T S+L + DV G
Sbjct: 252 IPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H +++ LD N +G++L++MYAK +ED+ +F L +D +W I+AG Q+
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ +K F QM +KP + +S + C+ + TL G+QLH I+ G +MF+A
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAKCG + A +FD + D VSW +I G + HG A+ FE M +G
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+ VL+ACSH GLI++ +FNS++K YGI P+ EHYA + D+LGRAGK E
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 550
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M +W T+L AC++H N+E + A K+F ++P Y++LSN +AA
Sbjct: 551 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGM 610
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D ++R M +G+KK P CSW+EV + + F++ D SHP I+ L++L +++
Sbjct: 611 WDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMS 670
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P+T VLH+V + +K+ LL+YHSERLA+ F ++ T TIRI KNLR+CGDCH
Sbjct: 671 VGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDF 730
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K IS+I +E++VRD + FHHF++G CSC ++W
Sbjct: 731 MKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 138/260 (53%), Gaps = 1/260 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D+ WN + +EA+ + M + ++ + F +S++ A D G
Sbjct: 50 MPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYG 109
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++G ++++ I ++ + MY K VE+ + F + +++ S N++++G
Sbjct: 110 ESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDT 169
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D+G + Q+L+ +P +F SI+ CA L+ GK +HG +I++G + + +
Sbjct: 170 ETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLW 229
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+++YAKCG+ A +F ++ D+VSWTA+I G G + +F QM +G
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFN 288
Query: 241 PNSVAFVAVLTACSHAGLID 260
PN F+++L +CS +D
Sbjct: 289 PNMYTFISILRSCSSLSDVD 308
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+I I++G+ + + SSL+N+Y KC ++ + ++ +P++D WN ++
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E ++ F M +I+ F+S++ A A L H G+ +H C+ + GF+ ++ I+
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ + MY K ++ F M + ++ S ++ G + Q+ +G +
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN F+++L C+ G +++ + + K GI P + ++ ++ + G A +
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACK 247
Query: 301 FISNMHAGPTENV--WLTLLSA 320
+ P +V W L++
Sbjct: 248 VFGEI---PERDVVSWTALITG 266
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 323/515 (62%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D +SW T+I A++ + EAL I R+ +K D + S+L + ++
Sbjct: 427 MRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLA 486
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H YAIR+GL ++ + + +I++Y +C V S ++F + KD ++W S+I +
Sbjct: 487 KQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANS 545
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L F +M ++P V+ SI+ A L++L GK++HG +IR F I
Sbjct: 546 GLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIV 605
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMY+ CG++ A +F+ + D+V WTA+I +HG+ AI LF++M + GV
Sbjct: 606 SSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVT 665
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+A+L ACSH+ L+++ Y + M Y + P EHYA V DLLGR+G+ +EAYE
Sbjct: 666 PDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYE 725
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P VW +LL ACRVHKN ELA A ++ ++P+N G YV++SN +A +
Sbjct: 726 FIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGK 785
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +A +R + +G++K PACSWIE+ N + F D SH RIN L E+ ER+ +
Sbjct: 786 WNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRK 845
Query: 421 E-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
E GY DT+ VLHDV EE+K ++L+ HSERLAI FG+I T G +RI KNLRVCGDCH
Sbjct: 846 EGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHE 905
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK+ R+I+VRD +RFHHF G CSCGD+W
Sbjct: 906 FTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 144/250 (57%), Gaps = 1/250 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ SWN++I G +NG++ +AL++ R M L +S+T VL + + + G+E+H
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELH 289
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G + N+ + L+ MY KC RV+ + R+F + KD ISWNS+++ VQNGL+
Sbjct: 290 AALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYA 348
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++F +ML +P H S+ A HL L GK++H I+ D + + ++L+
Sbjct: 349 EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLM 408
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KC I + +FD+M + D +SWT +I A +A+ +F + +K+G+K + +
Sbjct: 409 DMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468
Query: 245 AFVAVLTACS 254
++L ACS
Sbjct: 469 MIGSILEACS 478
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +SWN+++ +NGLY EA+ + +M +PD + S+ ++ GKE+H
Sbjct: 330 DYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVH 389
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ LD++ +G++L++MY KC +E S +F + +KD ISW +II Q+
Sbjct: 390 AYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHI 449
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ FR+ IK + SI+ AC+ L T+ L KQLH IRNG D + + + ++
Sbjct: 450 EALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLD-LVVKNRII 508
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y +CG + + +F+ ++ DIV+WT++I A G ++A+ LF +M+ V+P+SV
Sbjct: 509 DIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSV 568
Query: 245 AFVAVLTA 252
A V++L A
Sbjct: 569 ALVSILGA 576
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 143/261 (54%), Gaps = 5/261 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
M + SWN +I +G EAL + R M + PD TL+SVL D
Sbjct: 121 MSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAG 116
G E+HG A++HGLD + + ++LI MYAKC ++ + R+F L+ +D SWNS+I+G
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISG 240
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
C+QNG+F + L FR M A + + ++ C L L+LG++LH ++++G + N
Sbjct: 241 CLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN 300
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++LL MY KCG + A +F ++D D +SW +++ +G +AI +M +
Sbjct: 301 I-QCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR 359
Query: 237 DGVKPNSVAFVAVLTACSHAG 257
G +P+ V++ +A H G
Sbjct: 360 GGFQPDHACIVSLSSAVGHLG 380
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 11 TVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRH 70
T + L + G +AL ++ P VL + A V +G ++H +A+
Sbjct: 29 TSLKQLCKEGNLRQALRLLTSQ-TPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVAT 87
Query: 71 G-LDAN-VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
G L+ + + + L+ MY KC RV D+ LF + + SWN++I + +G E L
Sbjct: 88 GSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147
Query: 129 FFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+R M ++ + P + +S++ A G ++HG +++G D + F+A++L+
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIA 207
Query: 186 MYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG + A +F+ M D D+ SW ++I G +G A+ LF M++ + NS
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSY 267
Query: 245 AFVAVLTACS 254
V VL C+
Sbjct: 268 TTVGVLQVCT 277
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF--DDN 176
+ G + L+ + P+ + ++ A + G Q+H + G D+
Sbjct: 36 KEGNLRQALRLLTSQTPGRSPPQE-HYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDD 94
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME- 235
F+A+ LL MY KCG + AR +FD M + SW A+I G+A +A+ ++ M
Sbjct: 95 GFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRL 154
Query: 236 --KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
GV P+ +VL A G + + + +G+ S A+ + + G
Sbjct: 155 SAASGVAPDGCTLASVLKASGVEG-DGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSAC 321
L A MH G W +++S C
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGC 241
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/544 (41%), Positives = 331/544 (60%), Gaps = 35/544 (6%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+VSWNT+I G +NGL AL R + +++PD+FT++SVL A+ + GK++H
Sbjct: 444 IVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMH 503
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL-------------------------- 98
Y +R G+ + I ++LI+ YAK VE + R+
Sbjct: 504 SYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGD 563
Query: 99 -------FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
F ++ +D I+W ++I G QNG DE ++ FR M++ +P + ++++ A
Sbjct: 564 TKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSA 623
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVS 210
CA L L GKQ+H IR+ + ++ ++++++ +YA+ G++ LAR +FD++ + ++
Sbjct: 624 CASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT 683
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
WT++I+ A HG A+ LFE+M + GVKP+ + +V VL+AC+HAG +DK Y+ M
Sbjct: 684 WTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQ 743
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
++GI P HYA + DL RAG L EA+EFI M P VW +LL+ACRV KN +LA
Sbjct: 744 NEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLA 803
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
A K+ IDP+N GAY L+N Y+A RW DAA + ++KG+KK SW V+ K
Sbjct: 804 ELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGK 863
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ F A D HP I E+ E +++ G+VPD VLHDV++E K+ LL HSE+L
Sbjct: 864 VHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKL 923
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG+I TP+ TT+RI+KNLRVC DCHTAIKFISK V REIIVRD +RFHHF DG CSC
Sbjct: 924 AIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSC 983
Query: 511 GDYW 514
DYW
Sbjct: 984 KDYW 987
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 65/325 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +IVGL R+G + +A+ M + P FTL++VL A G
Sbjct: 307 MPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVG 366
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
+++H + ++ GL + V + +S++ MY KC E + +F + V+
Sbjct: 367 RKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQ 426
Query: 108 ------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSI 148
+SWN+IIAG QNGL LKFF +ML A ++P + +S+
Sbjct: 427 GRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSV 486
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGF---------------------------------DD 175
+ ACA+L L +GKQ+H I+R G D
Sbjct: 487 LSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADL 546
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ ++LL+ Y K G+ + AR IFD M+ D+++WTA+I+G +G +A+ LF M
Sbjct: 547 NVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMI 606
Query: 236 KDGVKPNSVAFVAVLTACSHAGLID 260
G +PNS AVL+AC+ +D
Sbjct: 607 LIGPEPNSHTLAAVLSACASLAYLD 631
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 149/303 (49%), Gaps = 22/303 (7%)
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
YA R+ N SL+++YAK R+ D+H +F +P +DA+SW +I G ++G F +
Sbjct: 276 YARRNAFTWN-----SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWD 330
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+K F M+ P + ++++ +CA + +G+++H +++ G + +A+S+L
Sbjct: 331 AVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLY 390
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG+ AR +F++M + + SW ++ G A+S+FE M V+ + V+
Sbjct: 391 MYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENM----VERSIVS 446
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS----FEHYAAVADL-LGRAGKLQEAYE 300
+ ++ + GL A +F+ M + P +A A+L + + GK +Y
Sbjct: 447 WNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYI 506
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMG------AYVILSNT 354
+ M + + L+S +VE A ++ ++ + D N + YV L +T
Sbjct: 507 LRTGMPC--SSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDT 564
Query: 355 YAA 357
A
Sbjct: 565 KQA 567
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 122/223 (54%), Gaps = 3/223 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++W +IVG +NG +EA+ + R M + +P+S TL++VL A + GK+IH
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIH 637
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQNGLF 123
AIR + +V + +++I +YA+ V + R+F + K+ I+W S+I Q+GL
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLG 697
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFIASS 182
++ + F +M+ +KP H+++ ++ ACAH + GK+ + + +G M +
Sbjct: 698 EQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYAC 757
Query: 183 LLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNA 224
++D++A+ G + A +M + D V W +++ + NA
Sbjct: 758 MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNA 800
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/541 (42%), Positives = 328/541 (60%), Gaps = 31/541 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD------- 53
+PV DL+SWNT+I G A++G +A R++ + D FT ++++ +
Sbjct: 214 IPVRDLISWNTMISGYAQDGDLSQA----RRLFEESPVRDVFTWTAMVYAYVQDGMLDEA 269
Query: 54 ---YVDVIKGKE------IHGYAIRHGLD-----------ANVCIGSSLINMYAKCARVE 93
+ ++ + +E I GYA +D N+ + +I+ Y + +
Sbjct: 270 RRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLA 329
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ LF ++P +D++SW +IIAG QNGL++E + +M +F + ACA
Sbjct: 330 QARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACA 389
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L LGKQ+HG ++R G++ + ++L+ MY KCG I A +F + DIVSW
Sbjct: 390 DIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNT 449
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
++ G A HG A+++FE M GVKP+ + V VL+ACSH GL D+ YF+SM KDY
Sbjct: 450 MLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDY 509
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P+ +HYA + DLLGRAG L+EA I NM P W LL A R+H N+EL +
Sbjct: 510 GITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQA 569
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
AE +F ++P+N G YV+LSN YAA+ RW D + +R+ MR G++KTP SW+EV+NK +
Sbjct: 570 AEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHT 629
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD HP RI L+EL +M+ EGYV TK VLHDVEEE+KK++L YHSE+LA+
Sbjct: 630 FTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVA 689
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FGI+ P G IR++KNLRVC DCH AIK ISKIV R IIVRD+ R+HHF +G CSC DY
Sbjct: 690 FGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDY 749
Query: 514 W 514
W
Sbjct: 750 W 750
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 138/285 (48%), Gaps = 47/285 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN ++ G R+G +EA ++ +M + N S + + +L + + +
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN----SISWNGLLAAYVRSGRLEEA 176
Query: 61 KEIH----------------GYAIRHGL-DA----------NVCIGSSLINMYAKCARVE 93
+ + GY R+ L DA ++ +++I+ YA+ +
Sbjct: 177 RRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLS 236
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ RLF PV+D +W +++ VQ+G+ DE + F +M + R +S++ ++ A
Sbjct: 237 QARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM----PQKREMSYNVMIAGYA 292
Query: 154 HLTTLHLGKQLHGCIIRNGFDD----NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
+ +G++L F++ N+ + ++ Y + G++ AR +FD M D V
Sbjct: 293 QYKRMDMGREL--------FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSV 344
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
SW A+I G A +G +A+++ +M++DG N F L+AC+
Sbjct: 345 SWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACA 389
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 51/271 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ + VS+N +I G RN F+L+ D D +
Sbjct: 59 MPLRNSVSYNAMISGYLRNA--------------------KFSLAR------DLFDKMPH 92
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++ + + ++ YA+ R+ D+ LF +P KD +SWN++++G V++
Sbjct: 93 KDLFSWNL-------------MLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRS 139
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE F +M +S++ ++ A L ++L + D +
Sbjct: 140 GHVDEARDVFDRM----PHKNSISWNGLLAAYVRSGRLEEARRL----FESKSDWELISC 191
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ Y K + AR +FD++ + D++SW +I G A G+ A LFE+ V
Sbjct: 192 NCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV- 250
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ A++ A G++D+A F+ M +
Sbjct: 251 ---FTWTAMVYAYVQDGMLDEARRVFDEMPQ 278
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 43/171 (25%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +P+++++S+N++I+G ++N F F +M P
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM------PH---------------- 92
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
++F + +L YA+ +R AR +FD M D+VSW A++ G
Sbjct: 93 -----------------KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSG 135
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
G+ +A +F++M NS+++ +L A +G +++A F S
Sbjct: 136 YVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARRLFES 182
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+RN N I+ Y + LAR +FDKM D+ SW ++ G A + DA
Sbjct: 61 LRNSVSYNAMISG-----YLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDAR 115
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
LF+ M + V V++ A+L+ +G +D+A F+ M I+ + +
Sbjct: 116 MLFDSMPEKDV----VSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS-----WNGLLAA 166
Query: 289 LGRAGKLQEA 298
R+G+L+EA
Sbjct: 167 YVRSGRLEEA 176
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 322/515 (62%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D VSW T+I A++ Y EA+ R +K D + S+L + +
Sbjct: 426 MRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLL 485
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H YAIR+GL ++ + + +I++Y +C V + +F +L KD ++W S++ +N
Sbjct: 486 KQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAEN 544
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + F +ML A I+P V+ I+ A A L++L GK++HG +IR F +
Sbjct: 545 GLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVV 604
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMY+ CG++ A +FD+ D+V WTA+I +HG+ AI +F++M + GV
Sbjct: 605 SSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVS 664
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+A+L ACSH+ L+D+ Y + M Y + P EHYA V DLLGR+G+ +EAY+
Sbjct: 665 PDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYK 724
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P VW LL ACR+HKN ELA +K+ ++P+N G YV++SN +A +
Sbjct: 725 FIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGK 784
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + +R M +G++K PACSWIE+ N + F A D SH I+ L E+ E++ +
Sbjct: 785 WNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRR 844
Query: 421 EG-YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
EG YV DT VLHDV EE+K +LL+ HSERLAI FG+I T GT +RI KNLRVCGDCH
Sbjct: 845 EGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHE 904
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK+ +REI+VRD +RFHHF G CSCGD+W
Sbjct: 905 FTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 147/248 (59%), Gaps = 1/248 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +SWN+++ +N LY EA++ +M PD + S+L +I G+E+H
Sbjct: 329 DYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVH 388
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YA++ LD+++ I ++L++MY KC VE S R+F + +KD +SW +IIA Q+ +
Sbjct: 389 AYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYS 448
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + FR IK + SI+ AC+ L ++ L KQ+H IRNG D + + + ++
Sbjct: 449 EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLD-LILKNRII 507
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y +CG + A IF+ +D DIV+WT+++ A +G H+A++LF +M G++P+SV
Sbjct: 508 DIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSV 567
Query: 245 AFVAVLTA 252
A V +L A
Sbjct: 568 ALVGILGA 575
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 146/250 (58%), Gaps = 1/250 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ SWN+ I G +NG++ EAL++ R+M + +S+T VL + A+ + G+E+H
Sbjct: 229 DVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELH 288
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G + N+ ++L+ MYA+C V+ + R+F + KD ISWNS+++ VQN L+
Sbjct: 289 AALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYA 347
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + FF +M+ P H S++ A HL L G+++H ++ D ++ IA++L+
Sbjct: 348 EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KC ++ + +FD+M + D VSWT +I A +AI F +K+G+K + +
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 245 AFVAVLTACS 254
++L ACS
Sbjct: 468 MMGSILEACS 477
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 139/262 (53%), Gaps = 6/262 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN----VNLKPDSFTLSSVLPIFADYVD 56
MP + SWN +I +G EA+ + R M PD TL+SVL D
Sbjct: 119 MPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGD 178
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIA 115
G E+HG A++ GLD + + ++L+ MYAKC ++ + R+F + +D SWNS I+
Sbjct: 179 GRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAIS 238
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
GCVQNG+F E L FR+M + ++ CA L L+ G++LH +++ G +
Sbjct: 239 GCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF 298
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ ++LL MYA+CG + A +F ++ D +SW +++ + +AI F +M
Sbjct: 299 NI-QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV 357
Query: 236 KDGVKPNSVAFVAVLTACSHAG 257
++G P+ V++L+A H G
Sbjct: 358 QNGFNPDHACIVSLLSAVGHLG 379
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 9/248 (3%)
Query: 16 LARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL-- 72
L ++G EAL + + P + VL + A V +G+++H +A+ G
Sbjct: 29 LCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALG 88
Query: 73 -DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
D + + L+ MY KC R+ D+HRLF +P + SWN++I C+ +G E + +R
Sbjct: 89 DDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYR 148
Query: 132 QML----IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
M +A P + +S++ AC G ++HG +++G D + +A++L+ MY
Sbjct: 149 AMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMY 208
Query: 188 AKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
AKCG + A +F+ M D D+ SW + I G +G +A+ LF +M+ DG NS
Sbjct: 209 AKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTT 268
Query: 247 VAVLTACS 254
V VL C+
Sbjct: 269 VGVLQVCA 276
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 322/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D++SW ++I GL NG EEAL + ++M ++P T + VL A+ V+ G
Sbjct: 162 MPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLG 221
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ ++ G + I SLI YA C ++E +H++F K+ + W +++ V N
Sbjct: 222 VQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWN 281
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L+ F M P +FS + AC L L GK++H I+ G + ++F+
Sbjct: 282 NKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVG 341
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY +CGN+ A +F ++ DIVSW ++I+G+A HG A+ F QM + GV
Sbjct: 342 NSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVD 401
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F +L+ACS +G++ K +F +++ +HYA + D+LGR GKL EA E
Sbjct: 402 PNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEE 461
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M +WL LLSACRVH N+E+A + A+ I ++PN AYV+LSN YA+A R
Sbjct: 462 LVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGR 521
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +RV M+ G+ K P SW+ ++ K + F++ D+SHP RI E L L +++++
Sbjct: 522 WADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKE 581
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD K LHDVE+EQK+ +L +HSERLAI FG++ T +G+TI ++KNLRVCGDCH+
Sbjct: 582 FGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSV 641
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +SKIV R+I+VRD+ RFHHF++G CSC DYW
Sbjct: 642 IKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWN++I G G A + +M P+ +S + ++ G
Sbjct: 69 MSVRDVVSWNSMIKGCLDCGNLGMATRLFDEM------PEKNVIS--------WTTMVNG 114
Query: 61 KEIHG---YAIRHGLD---ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
G A R LD +V +++++ Y + RVE+ RLF +PV+D ISW S+I
Sbjct: 115 YLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMI 174
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G NG +E L F++ML + ++P +F+ ++ ACA+ +LG Q+HG +++ G
Sbjct: 175 GGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCF 234
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ FI+ SL+ YA C I A IF++ ++V WTA++ + DA+ +F M
Sbjct: 235 FHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDM 294
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKA 262
K G PN F L AC +DK
Sbjct: 295 TKMGALPNQSTFSITLKACCGLEALDKG 322
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 100/182 (54%), Gaps = 8/182 (4%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ + + +I Y + R+ D+ +LF + V+D +SWNS+I GC+ G + F +M
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ +S+++++ + L ++L + ++ ++++ Y + G +
Sbjct: 102 EKNV----ISWTTMVNGYLKFGRVELAQRL----FLDMHVKDVAAWNAMVHGYFENGRVE 153
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+F++M + D++SWT++I G L+G + +A+ +F++M + GV+P F VL+AC+
Sbjct: 154 EGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACA 213
Query: 255 HA 256
+A
Sbjct: 214 NA 215
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/523 (41%), Positives = 330/523 (63%), Gaps = 9/523 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM------GNVNLKPDSFTLSSVLPIFADY 54
+P ++VSW ++I G NG +A+++ + + + + DS + SV+ +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRV 196
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNS 112
+ IH + I+ G D V +G++L++ YAK V + ++F + KD +S+NS
Sbjct: 197 AAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRH-VSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
I++ Q+G+ +E FR+++ K+ + ++ S+++ A +H L +GK +H +IR
Sbjct: 257 IMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +D++ + +S++DMY KCG + AR FD+M ++ SWTA+I G +HG+A A+ LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M GV+PN + FV+VL ACSHAGL D W +FN+M +G+ P EHY + DLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG LQ+AY+ I M P +W +LL+ACR+HKNVELA ++F +DP+N G Y++L
Sbjct: 437 AGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLL 496
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
S+ YA + RWKD +R+ M+N+G+ K P S +E+ + + F+ GD+ HP +I E L
Sbjct: 497 SHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
EL ++ + GYV +T V HDV+EE+K+ L HSE+LAI FGI+ T G+T+ ++KNL
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVC DCH IK ISKIV RE +VRD RFHHF+DG CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 183/367 (49%), Gaps = 21/367 (5%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+ SWN+VI LAR+G EAL M ++L P + + + +D+ GK+
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQT 98
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G +++ + S+LI MY+ C ++ED+ ++F +P ++ +SW S+I G NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 124 DEGLKFFRQMLI------AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ + F+ +LI A + + S++ AC+ + L + +H +I+ GFD +
Sbjct: 159 LDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGV 218
Query: 178 FIASSLLDMYAKCGN--IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++LLD YAK G + +AR IFD++ D VS+ +++ A G +++A +F ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLI 278
Query: 236 KDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ V N + VL A SH+G + + + + G+ ++ D+ + G+
Sbjct: 279 KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGR 337
Query: 295 LQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVI 350
++ A M +NV W +++ +H + A K E +F MID Y+
Sbjct: 338 VETARLAFDRM---KNKNVRSWTAMIAGYGMHGH---AAKALE-LFPAMIDSGVRPNYIT 390
Query: 351 LSNTYAA 357
+ AA
Sbjct: 391 FVSVLAA 397
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/517 (41%), Positives = 328/517 (63%), Gaps = 4/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G ++ G EAL++ +M P+ FT ++VL G
Sbjct: 71 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I+ ++++ +GSSL++MYAK ++ ++ R+F LP +D +S +II+G Q
Sbjct: 131 RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L FR++ ++ +V+++S++ A + L L G+Q+H ++R + +
Sbjct: 191 GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQ 250
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCG++ +R IFD M ++SW A+++G + HG +A+ LF+ M E++ V
Sbjct: 251 NSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKV 310
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMT--KDYGIAPSFEHYAAVADLLGRAGKLQE 297
KP+SV F+AVL+ CSH G+ D+ F M KD G P EHY V DL GRAG+++E
Sbjct: 311 KPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A+EFI M PT +W +LL ACRVH+NV + VA ++ I+ N G YVILSN YA+
Sbjct: 370 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 429
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW D ++R M+ K + K P SWIE+ + F A D+SHP + ++EL +
Sbjct: 430 AGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIK 489
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GYVP+ VL+DV++EQK+ +L HSE+LA+ FG+ICTP GT +RIIKNLR+C DC
Sbjct: 490 IKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDC 549
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H KF+S++ RE+ +RD +RFHH G CSCGDYW
Sbjct: 550 HNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 131/229 (57%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR 91
MG L+ + SVL + +G+ +H + I+ + V + + LI +Y KC
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
+ D+ R+ +P ++ +SW ++I+G Q G E L F +ML++ P +F++++ +
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C + LG+Q+H +I+ F+ ++F+ SSLLDMYAK G I AR +FD + D+VS
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
TA+I G A G +A+ LF +++++G++ N V + +VLTA S +D
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 229
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/541 (40%), Positives = 327/541 (60%), Gaps = 35/541 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I AR G E + M + D FT VL + + V GK +HG +
Sbjct: 139 FNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLIL 198
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG-----CV----- 118
R GL ++ + +SLI +Y KC + D+ ++F + ++D SWN+++AG C+
Sbjct: 199 RIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALA 258
Query: 119 ---------------------QNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHL 155
Q+GL + L F +M+ + ++P V+ S++PACA L
Sbjct: 259 IFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQL 318
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTA 213
+TL G+Q+H R G + N + +L MYAKCG++ AR FDK++ ++ +++W
Sbjct: 319 STLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNT 378
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I A +G+ A+S F +M + G++P+ + F +L+ CSH+GL+D YFN M+ Y
Sbjct: 379 MITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTY 438
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
I P EHYA VADLLGRAG+L EA + + M ++W +LL+ACR H+N+E+A
Sbjct: 439 SINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETA 498
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A K+F+++P N G YV+LSN YA A RW++ LR ++++G KK+P CSWIE+ KA+
Sbjct: 499 ARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHM 558
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F+ GD SHP I L+ L E+M+ GY PDT VLHD+ EE+K+ L HSE+LA+
Sbjct: 559 FLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVA 618
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FGI+ TP T +R+ KNLR+CGDCHTA+ FIS+I RE+IVRD +RFHHF+ G CSCGDY
Sbjct: 619 FGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDY 678
Query: 514 W 514
W
Sbjct: 679 W 679
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%), Gaps = 8/245 (3%)
Query: 39 PDSFTLSSVLPIFA--DYVDVIK-GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
P + S P+F ++++K G ++H + + GL +GS ++ YA ++ S
Sbjct: 65 PGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSS 124
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F + ++ +NS+I + G + + + M + +F ++ + L
Sbjct: 125 VSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVEL 184
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
++ +GK +HG I+R G ++++A+SL+ +Y KCG I A +FD M + D+ SW A++
Sbjct: 185 LSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALL 244
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYG 274
G G A+++FE+M N V++ +++ S +GL +A S F+ M K D G
Sbjct: 245 AGYTKSGCIDAALAIFERMPWR----NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300
Query: 275 IAPSF 279
+ P++
Sbjct: 301 VRPNW 305
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP ++VSW T+I G +++GL ++AL++ +M + ++P+ T+ SVLP A +
Sbjct: 263 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 322
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL--PVKDAISWNSIIAG 116
+G++IH A R GL++N + +L MYAKC + D+ F L K+ I+WN++I
Sbjct: 323 RGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
G + + FR+M+ A I+P ++F+ ++ C+H + +G
Sbjct: 383 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ Q L A P +S++ + L L LG Q+H ++ G + S ++
Sbjct: 55 LQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA G+I + +F+ + + + ++I A +G A ++ + M G + F
Sbjct: 115 YASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTF 174
Query: 247 VAVLTA-----------CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA--DLLGRAG 293
VL + C H GLI + I F+ Y A + L G+ G
Sbjct: 175 PFVLKSSVELLSVWMGKCVH-GLILR-------------IGLQFDLYVATSLIILYGKCG 220
Query: 294 KLQEAYEFISNM 305
++ +A + NM
Sbjct: 221 EINDAGKVFDNM 232
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP--IFADYVDVIKGKE 62
+L++WNT+I A G +A++ R+M ++PD T + +L + VDV
Sbjct: 372 NLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYF 431
Query: 63 IH---GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGC 117
H Y+I ++ C+ ++ + R+ ++ +L +P+ S W S++A C
Sbjct: 432 NHMSTTYSINPRVEHYACVA----DLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAAC 486
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/510 (40%), Positives = 313/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SWN ++ G N + L I QM P+ +T S+L + DV GK++H
Sbjct: 496 DLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 555
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ LD N +G++L++MYAK +ED+ +F L +D +W I+AG Q+G +
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 615
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ +K F QM +KP + +S + C+ + TL G+QLH I+ G +MF+AS+L+
Sbjct: 616 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 675
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + A +FD + D VSW +I G + HG A+ FE M +G P+ V
Sbjct: 676 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEV 735
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH GLI++ +FNS++K YGI P+ EHYA + D+LGRAGK E FI
Sbjct: 736 TFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEE 795
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M +W T+L AC++H N+E + A K+F ++P Y++LSN +AA W D
Sbjct: 796 MKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDV 855
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++R M +G+KK P CSW+EV + + F++ D SHP I+ L++L +++ GY
Sbjct: 856 TNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYT 915
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T VLH+V + +K+ LL+YHSERLA+ F ++ T TIRI KNLR+CGDCH +K I
Sbjct: 916 PNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSI 975
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S+I +E++VRD + FHHF++G CSC ++W
Sbjct: 976 SEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 162/294 (55%), Gaps = 1/294 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+ +I L + G EA + ++M + + P+ FTL+S++ D D+ G+ IH
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIH 454
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++G + + + ++L+ MY K V+D R+F +D ISWN++++G N D
Sbjct: 455 ACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCD 514
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
GL+ F QML P +F SI+ +C+ L+ + LGKQ+H I++N D N F+ ++L+
Sbjct: 515 TGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALV 574
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAK + A IF+++ D+ +WT ++ G A G A+ F QM+++GVKPN
Sbjct: 575 DMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEF 634
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ L+ CS +D +SM G + +A+ D+ + G +++A
Sbjct: 635 TLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 147/257 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW +I G G A+N+ +M ++ + FT ++ L + +D+ G
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG 248
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H AI+ G +++ +GS+L+++YAKC + + R+F +P ++A+SWN+++ G Q
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQM 308
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L F +M ++I + S+++ CA+ L G+ +H IR G + + FI+
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KCG A +F +++ D+VSW+A+I G + +A +F++M GV
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI 428
Query: 241 PNSVAFVAVLTACSHAG 257
PN ++++A + G
Sbjct: 429 PNQFTLASLVSAATDLG 445
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 140/260 (53%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSWN ++ G A+ G E+ LN+ +M + FTLS+VL A+ ++ G
Sbjct: 290 MPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG 349
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H AIR G + + I L++MY+KC D+ ++F + D +SW++II Q
Sbjct: 350 QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQK 409
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F++M + + P + +S++ A L L+ G+ +H C+ + GF+ + +
Sbjct: 410 GQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G+++ +F+ D++SW A++ G + + +F QM +G
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFN 529
Query: 241 PNSVAFVAVLTACSHAGLID 260
PN F+++L +CS +D
Sbjct: 530 PNMYTFISILRSCSSLSDVD 549
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 117/213 (54%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV 104
S +L A D+ +GK IHG I+ G++ + + +SL+N+YAKC + ++F +P
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+D +SW ++I G V G + F +M ++ ++++ + AC+ L GKQ+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
H I+ G ++F+ S+L+D+YAKCG + LA +F M + VSW A++ G A G+A
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
++LF +M + + VL C+++G
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSG 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 69/116 (59%)
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
K R +S ++ CA L+ GK +HG +I++G + + + +SL+++YAKCG+ A
Sbjct: 125 KGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACK 184
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+F ++ D+VSWTA+I G G A++LF +M ++GV+ N + L ACS
Sbjct: 185 VFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS 240
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/549 (41%), Positives = 339/549 (61%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M D+V+WN++I G + G AL+I +M + L PD FTL+SVL A+ +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--------------------- 98
GK+IH + + G D + + ++LI+MY++C VE + RL
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 99 ------------FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
F L +D ++W ++I G Q+G + E + FR M+ +P + +
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ + L +L GKQ+HG +++G ++ ++++L+ MYAK GNI A FD +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D VSWT++I+ A HG+A +A+ LFE M +G++P+ + +V V +AC+HAGL+++ Y
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F+ M I P+ HYA + DL GRAG LQEA EFI M P W +LLSACRVHK
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N++L AE++ +++P N GAY L+N Y+A +W++AA +R M++ +KK SWI
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
EVK+K + F D +HP + I +K++ + +++ GYVPDT VLHD+EEE K+ +L +
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TPD TT+RI+KNLRVC DCHTAIKFISK+V REIIVRD +RFHHF+D
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 180/404 (44%), Gaps = 66/404 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D VSW T+IVG G Y +A+ ++ M ++P FTL++VL A + G
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + ++ GL NV + +SL+NMYAKC + +F + V+D SWN++IA +Q
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 121 GLFDEGLKFFRQM--------------------------LIAK------IKPRHVSFSSI 148
G D + F QM + +K + P + +S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR----------- 197
+ ACA+L L +GKQ+H I+ GFD + + ++L+ MY++CG + AR
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 198 ----------------------CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
IF + D+V+WTA+I+G HG+ +AI+LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G +PNS A+L+ S + S K G S A+ + +AG +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNI 464
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM 339
A + W +++ A H + E A ++ E + M
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 37/255 (14%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H I+ GL +V + ++L+N+Y+K + +LF +P++ A SWN++++ + G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 123 FDEGLKFFRQ-------------------------------MLIAKIKPRHVSFSSIMPA 151
D +FF Q M+ I+P + ++++ +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
A + GK++H I++ G N+ +++SLL+MYAKCG+ +A+ +FD+M + DI SW
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 212 TAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
A+I + G A++ FEQM E+D V NS +++ + G +A F+ M
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS-----MISGFNQRGYDLRALDIFSKML 270
Query: 271 KDYGIAPSFEHYAAV 285
+D ++P A+V
Sbjct: 271 RDSLLSPDRFTLASV 285
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/508 (42%), Positives = 320/508 (62%), Gaps = 32/508 (6%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD +T +SVL A V++G+++H + ++G ++N+ + +SL+++Y K + +L
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFD-------------------------------EGL 127
F + V+D +SWN++I+G +G+ D + +
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAI 244
Query: 128 KFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ FRQM + P V+ S++ ACAHL L LGK +H I RN + +F+ ++L DM
Sbjct: 245 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADM 304
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG + A+ +F +M D++SW+ +IMG A++G A++A + F +M +DG++PN ++F
Sbjct: 305 YAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISF 364
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ +LTAC+HAGL+DK YF+ M + YGI P EHY V DLL RAG+L +A I++M
Sbjct: 365 MGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMP 424
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL CR++K+ E +V +I +D N+ G+ V L+N YA+ R DAAS
Sbjct: 425 MQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAAS 484
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
R+ MR+ KTP CSWIE+ N Y F GD SHP RI ++EL +M+ GY P
Sbjct: 485 CRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPK 544
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V+H+++EE+K++ L HSE+LA+ FG+I T +GTTIRI+KNLRVC DCH AIK ISK
Sbjct: 545 TDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISK 604
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IV+REI+VRD SRFHHF+DGKCSC DYW
Sbjct: 605 IVEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
M +LVSW+T+I G ARN Y +A+ + RQM + L P+ TL SVL A +
Sbjct: 219 MMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDL 278
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK IH + R+ ++ + +G++L +MYAKC V ++ +F + +D ISW+ II G
Sbjct: 279 GKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAM 338
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMF 178
G +E FF +M+ ++P +SF ++ AC H + G + + + G +
Sbjct: 339 YGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIE 398
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAIS-LFEQMEK 236
++D+ ++ G + A + + M + +++ W A++ G ++ +A ++ +E
Sbjct: 399 HYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILEL 458
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D S+ ++A + A G +D A S
Sbjct: 459 DSNHSGSLVYLANVYA--SMGRLDDAAS 484
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTL 158
L + ++N+++ Q+ + + +F L+ P +F+S++ ACA L +
Sbjct: 84 FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQV 143
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G+++H + + G + N+F+ +SL+D+Y K G +A+ +FD+M + D+VSW +I G
Sbjct: 144 LEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY 203
Query: 219 ALHGNAH-------------------------------DAISLFEQMEKD-GVKPNSVAF 246
G DAI LF QM+ + G+ PN V
Sbjct: 204 CFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTL 263
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V+VL+AC+H G +D + + + I A+AD+ + G + EA MH
Sbjct: 264 VSVLSACAHLGALDLG-KWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 322
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 332/539 (61%), Gaps = 35/539 (6%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I G ++G+ +A + R+M + + D FT +SVL A+ + GK +HG
Sbjct: 264 VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQ 323
Query: 67 AIRHGL----DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI--------- 113
IR +A + + ++L+ +Y+K ++ + R+F + +KD +SWN+I
Sbjct: 324 IIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGC 383
Query: 114 ----------------------IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
++G V GL ++ LK F QM +KP +++ + A
Sbjct: 384 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAA 443
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C L L G+QLH +++ GF+ + ++LL MYAKCG + AR +F M D VSW
Sbjct: 444 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 503
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I HG+ +A+ LF+QM +G+ P+ ++F+ +LTAC+HAGL+D+ + YF SM +
Sbjct: 504 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR 563
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
D+GI+P +HYA + DLLGR+G++ EA + I M PT ++W +LS CR + ++E
Sbjct: 564 DFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGA 623
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+++F + P + G Y++LSNTY+AA RW DAA +R MR++G+KK P CSWIEV +K
Sbjct: 624 YAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKI 683
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F+ GD HP + + L+ + RM + GYVPDTK VLHD+E +K+ +L+ HSE+LA
Sbjct: 684 HVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLA 743
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
+ FG++ P G T+ ++KNLR+CGDCHTA+ F+SK V REI+VRD RFHHF+DG+CSC
Sbjct: 744 VGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW ++ G GL E+AL + QM ++KP +T + + + + G
Sbjct: 394 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 453
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + ++ G +A+ G++L+ MYAKC V D+ +F ++P D++SWN++I+ Q+
Sbjct: 454 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 513
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F QM+ I P +SF +I+ AC H + G + R+ G
Sbjct: 514 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 573
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN----AHDAISLFEQM 234
+ L+D+ + G I AR + M S W A++ G +G+ A+ A LF +
Sbjct: 574 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 633
Query: 235 EK-DGV 239
+ DG
Sbjct: 634 PQHDGT 639
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 177/386 (45%), Gaps = 59/386 (15%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG--K 61
D V N ++ AR L A+++ + G+ +L+PD ++ ++++ ++
Sbjct: 124 DTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCT 183
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISW-------- 110
++H ++ G A + + ++LI +Y KC E D+ ++ +P KD ++W
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 243
Query: 111 -----------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
N++I+G VQ+G+ + + FR+M+ K+ +F+S
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303
Query: 148 IMPACAHLTTLHLGKQLHGCIIR--NGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ ACA+ GK +HG IIR F + + + ++L+ +Y+K G I +A+ IFD M
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+L D+VSW ++ G G A+ +F+ M N ++++ +++ H GL + A
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDAL 419
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM------HAGPTENVWLTL 317
FN M + + P YA G G L+ + +++ + N LT+
Sbjct: 420 KLFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM 478
Query: 318 LSACRVHKNVELAGKVAEKIFMIDPN 343
+ C + L +F++ PN
Sbjct: 479 YAKCGAVNDARL-------VFLVMPN 497
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 49/286 (17%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQML-IA 136
+SL+ A R+ D+ F +P +D + N++++ + L + F +L
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
++P SF++++ A + L QLH ++++G + ++++L+ +Y KC
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 195 L---ARCIFDKMDLHDIVSWTAVIMGNALHGNAH-------------------------- 225
AR + D+M D ++WT +++G G+ +
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 226 -----DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
DA LF +M + V + F +VL+AC++AG S + + + P+F
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR---LQPNFV 332
Query: 281 HYAAVA------DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
AA+ L + GK+ A M+ + W T+LS
Sbjct: 333 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVS-WNTILSG 377
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 328/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SW ++I G A+N + +EAL ++ M KP+ FT +S+L G
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG 184
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH +++ +V +GS+L++MYA+C R++ + +F L K+ +SWN++IAG +
Sbjct: 185 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +M + H ++SS+ A A + L GK +H +I++G + F+
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++LDMYAK G++ AR +FD++D D+V+W +++ A +G +A++ FE+M K GV
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F+++LTACSH GL+ + YF+ M K+Y + P +HY V DLLGRAG L +A
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALV 423
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL +CR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 424 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 483
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA +R M+ G+KK PACSW+E++N + FVA D +HP I + +E+ ++ +
Sbjct: 484 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 543
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL V+E++++ L YHSE++A+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 544 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 603
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ISK+ +REI+VRD +RFHHF G CSCGDYW
Sbjct: 604 FRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 123/217 (56%)
Query: 46 SVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK 105
S++ A Y + + IH + +V + +SLI++Y KC V D+ R+F +P +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
D SW S+IAG QN + DE L ML + KP +F+S++ A + +G+Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
++ + D++++ S+LLDMYA+CG + +A +FD+++ + VSW A+I G A G+
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ +F +M+++G + + +V +A + G +++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 285
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ S++ ACA +L + +H + + F ++F+ +SL+ +Y KCG + AR +FD M
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+ SWT++I G A + +A+ L M + KPN F ++L A A
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG-ASASSGIGE 185
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+++T Y +A+ D+ R G++ A
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 321/513 (62%), Gaps = 2/513 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DLVSWN++I +N AL + M ++PD T+ S+ IF+ D
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRIS 342
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ I G+ IR LD +V IG++L+NMYAK + +H +F LP KD ISWN+++ G Q
Sbjct: 343 RSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQ 402
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E + + M + P ++ SI+PA +H+ L G ++H +I+N ++F
Sbjct: 403 NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVF 462
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ L+D+Y KCG + A +F ++ V W A+I +HG +A+ LF+ M +
Sbjct: 463 VATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER 522
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VK + + FV++L+ACSH+GL+D+ F+ M K+YGI PS +HY + DLLGRAG L++A
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKA 582
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
YE + NM P ++W LLSAC+++ N EL ++++ +D N+G YV+LSN YA
Sbjct: 583 YELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANT 642
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ +R R++G++KTP S + V +KA F G+++HP Y I + LK L +M
Sbjct: 643 EKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKM 702
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD V D+EE++K+ +L HSERLAI FGII TP + IRI KNLRVCGDCH
Sbjct: 703 KSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCH 762
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
A K+IS+I +REI+VRD++RFHHF+DG CSC
Sbjct: 763 NATKYISRISEREIVVRDSNRFHHFKDGICSCA 795
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 183/333 (54%), Gaps = 6/333 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWN +I G +NG AL ++ +M +K D+ T++S+LP+ A DVI G
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH + ++HGLD++V + ++LINMY+K R++D+ +F + V+D +SWNSIIA QN
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
L+FF+ M + I+P ++ S+ + L+ + + + G +IR D ++ I
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KD 237
++L++MYAK G + A +FD++ D +SW ++ G +G A +AI + ME +D
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRD 421
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ PN +V+++ A SH G + + + K+ F + DL G+ G+L++
Sbjct: 422 TI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA-TCLIDLYGKCGRLED 479
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
A + T W ++++ +H E A
Sbjct: 480 AMSLFYEI-PRDTSVPWNAIIASLGIHGRGEEA 511
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 151/255 (59%), Gaps = 7/255 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
++ SWN++I R G Y EA+N V Q+ G +L+PD +T PI V ++ G
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFP---PILKACVSLVDG 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + G + +V + +SL+++Y++ ++ +H++F +PVKD SWN++I+G QN
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G L +M +K ++ +SI+P CA + G +H ++++G D ++F++
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+K G ++ A+ +FD+M++ D+VSW ++I + + A+ F+ M+ G++
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIR 320
Query: 241 PNSVAFVAVLTACSH 255
P+ + V++ + S
Sbjct: 321 PDLLTVVSLTSIFSQ 335
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
+F V+V K++H + G N+ + + LIN+Y + S F + K+ S
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
WNSII+ V+ G + E + Q+ ++P +F I+ AC L GK++H
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVH 144
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
C+ + GF+D++F+A+SL+ +Y++ G + +A +F M + D+ SW A+I G +GNA
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHA-GLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
A+ + +M+ +GVK +++ ++L C+ + +I+ + + + +G+ A
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNA 262
Query: 285 VADLLGRAGKLQEAYEFISNMH 306
+ ++ + G+LQ+A M
Sbjct: 263 LINMYSKFGRLQDAQMVFDQME 284
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 320/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V ++ +WN +I G+A+ EAL++ QM PD+ T ++L +
Sbjct: 396 LAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV 455
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H YAI GL ++ +G++L++MYAKC + ++F + ++ +W +I+G Q+
Sbjct: 456 KEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E F QML I P ++ SI+ ACA L K++H + G ++ +
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVG 574
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MYAKCG++ AR +FD M D+ SWT +I G A HG DA+ LF +M+ +G K
Sbjct: 575 NALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFK 634
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN +FVAVL+ACSHAGL+D+ F S+T+DYGI P+ EHY + DLLGRAG+L+EA
Sbjct: 635 PNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKH 694
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P + W LL AC + N+E+A A++ + P + YV+LSN YAA
Sbjct: 695 FILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGN 754
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ +R M+ +G++K P SWIEV N+ ++FV GD SHP I LK+L++R++
Sbjct: 755 WEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKA 814
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPDT+ VL + ++E K+ L HSE+LAIV+G++ TP IR+ KNLRVC DCHTA
Sbjct: 815 EGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTA 874
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK+ REI+ RD RFHHF+DG CSCGDYW
Sbjct: 875 TKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 159/302 (52%), Gaps = 4/302 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN +I GLA+NG EA I +M PDS T S+L KE+H
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+A+ GL +++ +GS+ ++MY +C ++D+ +F L V++ +WN++I G Q
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F QM P +F +I+ A L K++H I G D + + ++L+
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVD-LRVGNALV 477
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCGN A+ +FD M ++ +WT +I G A HG H+A SLF QM ++G+ P++
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDAT 537
Query: 245 AFVAVLTACSHAGLIDKAW-SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+V++L+AC+ G ++ W +S + G+ A+ + + G + +A
Sbjct: 538 TYVSILSACASTGALE--WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFD 595
Query: 304 NM 305
+M
Sbjct: 596 DM 597
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 9/303 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +I GLA G +EA + QM P+S+T S+L A +
Sbjct: 91 MVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWV 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H +A+ GL ++ +G++L++MYAK ++D+ +F + +D SW +I G Q+
Sbjct: 151 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQH 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT--LHLGKQLHGCIIRNGFDDNMF 178
G E F QM P ++ SI+ A A +T L K++H + GF ++
Sbjct: 211 GRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR 270
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MYAKCG+I AR +FD M D++SW A+I G A +G H+A ++F +M+++G
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK---DYGIAPSFEHYAAVADLLGRAGKL 295
P+S ++++L G AW + + K + G+ +A + R G +
Sbjct: 331 FVPDSTTYLSLLNTHVSTG----AWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSI 386
Query: 296 QEA 298
+A
Sbjct: 387 DDA 389
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 128/243 (52%)
Query: 12 VIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG 71
+I G A G E+A+ + QM +P+ T S+L V + GK+IH + I+ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
++V + ++L+NMY KC ++D+ +F + ++ ISW +I G G E F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
QM P ++ SI+ A A L K++H + G ++ + ++L+ MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+I AR +FD M DI SWT +I G A HG +A SLF QME+ G PN ++++L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 252 ACS 254
A +
Sbjct: 241 ASA 243
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 60/359 (16%)
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
+I G + G ++ +K + QM +P +++ SI+ AC +L GK++H II++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
F ++ + ++L++MY KCG+I A+ IFDKM +++SWT +I G A +G +A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAW-----------------SYFNSMTKDYGI 275
QM+++G PNS +V++L A + AG ++ W N++ Y
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALE--WVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 276 APSFEHYAAVAD---------------LLGRAGKLQEAYEFISNMHAG---PTENVWLTL 317
+ S + V D L + G+ QEA+ M G P +L++
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 318 LSACRVHKN-----VELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
L+A + V+ K A K I +G +I + YA DA VF
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALI--HMYAKCGSIDDAR--LVF-- 292
Query: 373 NKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVL 431
GM SW A + G + H EA L +M+QEG+VPD+ L
Sbjct: 293 -DGMCDRDVISW-------NAMIGGLAQNGCGH---EAFTIFL-KMQQEGFVPDSTTYL 339
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/510 (43%), Positives = 320/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SW +I A++G +EA ++ QM KP++ T S+L A + K +H
Sbjct: 194 DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+A+ GL+ +V +G++L+ MYAK ++D+ +F + V+D +SWN +I ++G
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E F QM KP + F SI+ ACA L K++H + +G + ++ + ++L+
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY+K G+I AR +FD+M + ++VSW A+I G A HG DA+ +F +M GVKP+ V
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRV 433
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FVAVL+ACSHAGL+D+ S + +MT+ YGI P H + DLLGRAG+L EA FI N
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P E W LL +CR + NVEL VA++ +DP N YV+LSN YA A +W
Sbjct: 494 MAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMV 553
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+ +R MR +G++K P SWIEV NK + F+ D SHP INE+ +++E+++ EGY+
Sbjct: 554 SWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYI 613
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ VL + + K+ + HSE+LAIV+G++ TP G IR+ KNLRVC DCH A K I
Sbjct: 614 PDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLI 673
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 674 SKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 170/321 (52%), Gaps = 10/321 (3%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G + E+A+ + R+M + ++P++ T +L A + GKE+H
Sbjct: 96 SWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA-C 154
Query: 68 IRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
IRHG L+++V +G++L+ MY KC + ++ R+F L D ISW +I Q+G E
Sbjct: 155 IRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEA 214
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ QM KP +++ SI+ ACA L K++H + G + ++ + ++L+ M
Sbjct: 215 YRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQM 274
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAK G+I AR +FD+M + D+VSW +I A HG H+A LF QM+ +G KP+++ F
Sbjct: 275 YAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334
Query: 247 VAVLTACSHAGLIDKAW-SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+++L AC+ AG ++ W + D G+ A+ + ++G + +A M
Sbjct: 335 LSILNACASAGALE--WVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM 392
Query: 306 HAGPTENV--WLTLLSACRVH 324
NV W ++S H
Sbjct: 393 ---KVRNVVSWNAMISGLAQH 410
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 154/282 (54%), Gaps = 1/282 (0%)
Query: 24 EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLI 83
EA+ ++ L DSF VL D++ K++H I+ ++ N + ++L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 84 NMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHV 143
++Y +C R++++ +F L K SWN++IAG V++ ++ ++ FR+M ++P
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ I+ ACA L+ L GK++H CI G + ++ + ++LL MY KCG+I AR IFD +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
HDI+SWT +I A GN +A L QME++G KPN++ +V++L AC+ G + K
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL-KWV 249
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ D G+ A+ + ++G + +A M
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 151/280 (53%), Gaps = 10/280 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWN +I A +G EA ++ QM KPD+ S+L A +
Sbjct: 291 MKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWV 350
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH +A+ GL+ +V +G++L++MY+K ++D+ +F + V++ +SWN++I+G Q+
Sbjct: 351 KKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQH 410
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
GL + L+ FR+M +KP V+F +++ AC+H + G+ + + + G + ++
Sbjct: 411 GLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSH 470
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A+ D M + D +W A++ +GN + L E + K+
Sbjct: 471 CNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGN----VELGELVAKER 526
Query: 239 VK---PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+K N+ +V + + AG D S+ +M ++ GI
Sbjct: 527 LKLDPKNAATYVLLSNIYAEAGKWDMV-SWVRTMMRERGI 565
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 327/515 (63%), Gaps = 22/515 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G R+G + A+ +++QM +K D ++S+L A + G
Sbjct: 312 MGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y + + +N+ + ++L++MYAKC +E ++ +F + VKD ISWN+
Sbjct: 372 KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNT-------- 423
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ ++KP + + I+PACA L+ L GK++HG I+RNG+ + +A
Sbjct: 424 -------------MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y KCG + LAR +FD + D+VSWT +I G +HG ++AI+ F +M G++
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+++L ACSH+GL+++ W +F M D+ I P EHYA + DLL R G L +AY+
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 590
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + P +W LL CR++ ++ELA KVAE++F ++P N G YV+L+N YA A +
Sbjct: 591 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG-DKSHPFYHRINEALKELLERME 419
++ +R + KG++K P CSWIE+K + FV+G + SHP +I LK++ +M+
Sbjct: 651 REEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L + +E QK+ L HSE+LA+ FG++ P TIR+ KNLRVCGDCH
Sbjct: 711 EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 770
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK +REI++RD++RFHHF+DG CSC +W
Sbjct: 771 MAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 54/352 (15%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+ +N I+ + G E A+ +V L+ ++ SVL + A + GK++H
Sbjct: 65 QVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTY--GSVLQLCAGLKSLTDGKKVH 122
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------------- 99
+ + + +G L++ YA C +++ R+F
Sbjct: 123 SIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182
Query: 100 ---CLLPV-----------------------KDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
CL + +D ISWNS+I+G V NGL + GL ++QM
Sbjct: 183 ESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ I + S++ CA+ TL LGK +H I++ F+ + +++LLDMY+KCG++
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A +F+KM ++VSWT++I G G + AI L +QMEK+GVK + VA ++L AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHAC 362
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ +G +D + + K +A + A+ D+ + G ++ A S M
Sbjct: 363 ARSGSLDNGKDVHDYI-KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM 413
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/514 (41%), Positives = 324/514 (63%), Gaps = 5/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I ++ ++++AL ++ M N++P+ +T SSVL DV
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--- 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H I+ GL+++V + S+LI+++AK ED+ +F + DAI WNSII G QN
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D L+ F++M A + +S++ AC L L LG Q H I++ +D ++ +
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG++ A +F++M D+++W+ +I G A +G + +A+ LFE+M+ G K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V VL ACSHAGL++ W YF SM K YGI P EHY + DLLG+AGKL +A +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P W TLL ACRV +N+ LA A+K+ +DP + G Y +LSN YA +++
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR++G+KK P CSWIEV + +AF+ GD SHP +++ L +L+ R+
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL D+E EQ ++ L +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVF 596
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K SK+ R I++R R+HHF+DGKCSCGDYW
Sbjct: 597 CKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 132/257 (51%), Gaps = 9/257 (3%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LINMY K + D+H+LF +P ++ ISW ++I+ + + + L+ ML ++P
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++SS++ +C ++ + + LH II+ G + ++F+ S+L+D++AK G A +FD
Sbjct: 162 VYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M D + W ++I G A + + A+ LF++M++ G +VL AC+ L++
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 262 AWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ K D + + A+ D+ + G L++A + M W T++S
Sbjct: 279 GMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKERDV-ITWSTMISG 333
Query: 321 CRVHKNVELAGKVAEKI 337
+ + A K+ E++
Sbjct: 334 LAQNGYSQEALKLFERM 350
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/517 (41%), Positives = 328/517 (63%), Gaps = 4/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G ++ G EAL++ +M P+ FT ++VL G
Sbjct: 538 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG 597
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I+ ++++ +GSSL++MYAK ++ ++ R+F LP +D +S +II+G Q
Sbjct: 598 RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL 657
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L FR++ ++ +V+++S++ A + L L G+Q+H ++R + +
Sbjct: 658 GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQ 717
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCG++ +R IFD M ++SW A+++G + HG +A+ LF+ M E++ V
Sbjct: 718 NSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKV 777
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMT--KDYGIAPSFEHYAAVADLLGRAGKLQE 297
KP+SV F+AVL+ CSH G+ D+ F M KD G P EHY V DL GRAG+++E
Sbjct: 778 KPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCVVDLFGRAGRVEE 836
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A+EFI M PT +W +LL ACRVH+NV + VA ++ I+ N G YVILSN YA+
Sbjct: 837 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 896
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW D ++R M+ K + K P SWIE+ + F A D+SHP + ++EL +
Sbjct: 897 AGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIK 956
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GYVP+ VL+DV++EQK+ +L HSE+LA+ FG+ICTP GT +RIIKNLR+C DC
Sbjct: 957 IKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDC 1016
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H KF+S++ RE+ +RD +RFHH G CSCGDYW
Sbjct: 1017 HNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 138/245 (56%), Gaps = 3/245 (1%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
L N +EAL +MG L+ + SVL + +G+ +H + I+ +
Sbjct: 455 LCSNRQLKEAL---LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPP 511
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
V + + LI +Y KC + D+ R+ +P ++ +SW ++I+G Q G E L F +ML+
Sbjct: 512 VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 571
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
+ P +F++++ +C + LG+Q+H +I+ F+ ++F+ SSLLDMYAK G I
Sbjct: 572 SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICE 631
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
AR +FD + D+VS TA+I G A G +A+ LF +++++G++ N V + +VLTA S
Sbjct: 632 ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG 691
Query: 256 AGLID 260
+D
Sbjct: 692 LAALD 696
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/507 (43%), Positives = 315/507 (62%), Gaps = 31/507 (6%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD+FT S VL DV+ GK IHG + G +N+ + + ++N+Y C + D+ L
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 99 FCLLPVKDAISWN-------------------------------SIIAGCVQNGLFDEGL 127
F +P +DA++WN S+I+G VQ G +E +
Sbjct: 68 FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F ++ ++P V+ S++ ACA L L LG+ +H ++GF N+ + ++L+DMY
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG + AR +F +M+ +VSW+A+I G A+HG A +A+ LF +M K GVKPN V F+
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFI 247
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+L ACSH GLID+ +F SMT DYG+ P EHY V DL RAG L+EA+EFI +M
Sbjct: 248 GLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPI 307
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P VW LL C+VHKN++LA + + + +DP N G YV++SN YA A RW+DAA +
Sbjct: 308 KPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARV 367
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M+++G+KKT S I V + FVAGD++HP I + +LL +M++ GY P T
Sbjct: 368 RKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKT 427
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
VL D+EE++K+ LY HSE+LA+VFG++ TP+GT IRI+KNLRVC DCH A+K IS I
Sbjct: 428 SVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGI 487
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
V REIIVRD +RFH F DG+CSC D+W
Sbjct: 488 VSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 130/240 (54%), Gaps = 5/240 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ SW ++I G + G EA+++ ++ + ++P+ T+ SVL AD D+ G
Sbjct: 102 MPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y+ + G NV + ++LI+MY KC +E++ R+F + + +SW+++IAG +
Sbjct: 162 RIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMH 221
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E L F +M+ +KP V+F ++ AC+H+ + G++ + + G +
Sbjct: 222 GQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEH 281
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN---AHDAISLFEQME 235
++D++++ G + A M + + V W A++ G +H N A +AI +++
Sbjct: 282 YGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + + P + S ++ AC L+ + GK +HG + GF N+F+ + +L++Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 193 IRLARCIFDKMDLHDIV-------------------------------SWTAVIMGNALH 221
+ A +F+KM D V SWT++I G
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G ++AI LF ++E + V+PN V V+VL AC+ G +D + +Y F+
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLD-----LGRIVHEYSTKSGFKR 175
Query: 282 YAAVA----DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
V D+ + G L+ A M T W +++ +H E A
Sbjct: 176 NVHVCNTLIDMYVKCGCLENARRVFYEMEE-RTVVSWSAMIAGLAMHGQAEEA 227
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/514 (42%), Positives = 326/514 (63%), Gaps = 3/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWN++IVG +N LY A+ + R++ ++L PD ++SSVL A V++ G
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFG 318
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG ++ GL V + +SL++MY KC ED+ +LFC +D ++WN +I GC +
Sbjct: 319 KQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRC 378
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F++ +F+ M+ ++P S+SS+ A A + L G +H +++ G N I+
Sbjct: 379 RNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRIS 438
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+ MY KCG++ A +F + H++V WTA+I HG A++AI LFE+M +GV
Sbjct: 439 SSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVV 498
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P + FV+VL+ACSH G ID + YFNSM + I P EHYA + DLLGR G+L+EA
Sbjct: 499 PEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACR 558
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P VW LL AC H NVE+ +VAE++F ++P+N G Y++LSN Y
Sbjct: 559 FIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGM 618
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
++A +R M G++K CSWI+VKN+ + F A D+SH I L++L E +++
Sbjct: 619 LEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKR 678
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYV +T+ + VE ++++ L+ HSE+LA+ FG++ P G+ +RI KNLR CGDCHT
Sbjct: 679 RGYVAETQFATNSVEGSEEQS-LWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTV 737
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KF S+I QREIIVRD +RFH F +G CSC DYW
Sbjct: 738 MKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 164/299 (54%), Gaps = 3/299 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +++V+W T+I L+R+ +AL +M + P+ FT S++LP A + +G+
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQ 220
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH +H + + ++L++MYAKC + + +F +P ++ +SWNS+I G V+N
Sbjct: 221 QIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L+ + FR++L + P VS SS++ ACA L L GKQ+HG I++ G +++ +
Sbjct: 281 LYGRAIGVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN 338
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+DMY KCG A +F D+V+W +IMG N A + F+ M ++GV+P
Sbjct: 339 SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEP 398
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ ++ ++ A + + + + +S G + +++ + G+ G + +AY+
Sbjct: 399 DEASYSSLFHASASIAALTQG-TMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQ 456
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 186/394 (47%), Gaps = 40/394 (10%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQ 119
+IH + A++ ++L+ +YAKC + + LF P + ++W ++I +
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + L FF +M I P H +FS+I+PACAH L G+Q+H I ++ F ++ F+
Sbjct: 178 SNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFV 237
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG---NALHGNAHDAISLFEQMEK 236
A++LLDMYAKCG++ LA +FD+M ++VSW ++I+G N L+G AI +F ++
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGR---AIGVFREVLS 294
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G P+ V+ +VL+AC+ +D S+ K G+ ++ D+ + G +
Sbjct: 295 LG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKR-GLVGLVYVKNSLVDMYCKCGLFE 351
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+A + G +V W ++ C +N E A + + ++P+ +Y L
Sbjct: 352 DATKLFC---GGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDE-ASYSSLF 407
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTP--ACSWIEVKNK------AYAFVAGDKSH--- 401
+ A+ + + G K + S + + K AY K H
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467
Query: 402 ------PFYHR---INEALKELLERMEQEGYVPD 426
+H+ NEA+K L E M EG VP+
Sbjct: 468 CWTAMITVFHQHGCANEAIK-LFEEMLNEGVVPE 500
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 14/223 (6%)
Query: 140 PRHVSFSSI------MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
P+ FSS+ + A L +L Q+H ++ ++ ++LL +YAKCG+I
Sbjct: 89 PKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSI 148
Query: 194 RLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+F+ ++V+WT +I + A++ F +M G+ PN F A+L
Sbjct: 149 HHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILP 208
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
AC+HA L+ + + K + F A+ D+ + G + A M P
Sbjct: 209 ACAHAALLSEGQQIHALIHKHCFLNDPFV-ATALLDMYAKCGSMLLAENVFDEM---PHR 264
Query: 312 NV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
N+ W +++ +K A V ++ + P+ + +LS
Sbjct: 265 NLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLS 307
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 326/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SW T+I G +G + EA + M S T ++++ A V G
Sbjct: 178 MPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVG 237
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH A++ G+ + + +LI+MY+KC +ED+H +F +P K + WNSIIA +
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 297
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F+ +M + K H + S ++ CA L +L KQ H ++R G+D ++
Sbjct: 298 GYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN 357
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D Y+K G + A +F++M +++SW A+I G HG +A+ +FEQM ++G+
Sbjct: 358 TALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMI 417
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+AVL+ACS++GL ++ W F SM++D+ + P HYA + +LLGR G L EAYE
Sbjct: 418 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYE 477
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + PT N+W TLL+ACR+H+N+EL AE ++ ++P + Y++L N Y ++ +
Sbjct: 478 LIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGK 537
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
K+AA + ++ KG++ PAC+WIEVK ++YAF+ GDKSH I E + ++ + +
Sbjct: 538 LKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISR 597
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYV + K +L DV+EE+++ +L YHSE+LAI FG+I TP T ++I + RVCGDCH+A
Sbjct: 598 HGYVEENKALLPDVDEEEQR-ILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSA 656
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFI+ + REI+VRD SRFHHF DG CSCGDYW
Sbjct: 657 IKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ +++ AC L ++ K++ ++ +GF+ ++++ + +L ++ KCG + AR +FD+M
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+ SW +I G GN +A LF M ++ S F ++ A + GL+ +
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLV-QVG 237
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
+S G+ A+ D+ + G +++A+ M T W +++++ +
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVG-WNSIIASYAL 296
Query: 324 HKNVELA 330
H E A
Sbjct: 297 HGYSEEA 303
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 326/510 (63%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVS+N +I G N E ++ + +++ K +S ++ ++P+F + + + IH
Sbjct: 272 DLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIH 331
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ + G+ +N + ++L +Y++ +E + LF K SWN++I+G QNGL +
Sbjct: 332 GFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTE 391
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F++M +++P V+ +SI+ ACA L L LGK +H I R F+ N+F++++L+
Sbjct: 392 KAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALI 451
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I A+ +F M + V+W A+I G LHG H+A++LF +M V P V
Sbjct: 452 DMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGV 511
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++VL ACSHAGL+ + F SM D+G P EHYA + DLLGRAG L +A +FI
Sbjct: 512 TFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRK 571
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW LL AC +HK+ LA ++K+F +DP N+G YV+LSN Y+A + + +A
Sbjct: 572 MPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEA 631
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R ++ + + KTP C+ IEV N + F +GD+SHP I L++L +M + G+
Sbjct: 632 ASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQ 691
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+T LHDVEEE+K+ ++ HSE+LAI FG+I + GT IRIIKNLRVC DCH A KFI
Sbjct: 692 TETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFI 751
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 752 SKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 168/326 (51%), Gaps = 14/326 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V WNT++ GL +N ++EA+ I M + DS T+++VLP A+ D+ G I
Sbjct: 171 DTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQ 230
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ G ++ + + L +Y+KC +E + LF + D +S+N++I+G N +
Sbjct: 231 CLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETE 290
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
++ F+++L++ K S ++P LHL + +HG ++G N ++++L
Sbjct: 291 SSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALT 350
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y++ I AR +FD+ + SW A+I G A +G AISLF++M+K V+PN V
Sbjct: 351 TVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPV 410
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADLLGRAGKLQEAYE 300
++L+AC+ G + + + ++ SFE A+ D+ + G + EA
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRE-----SFESNIFVSTALIDMYAKCGSITEAQR 465
Query: 301 FISNMHAGPTEN--VWLTLLSACRVH 324
S M P +N W ++S +H
Sbjct: 466 LFSMM---PEKNAVTWNAMISGYGLH 488
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 134/251 (53%), Gaps = 4/251 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P DL +N +I + N A+++ + + L+PD+FT + V+ + +
Sbjct: 68 IPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVI---SGASSLGL 124
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +H ++I G +++ +GS+++ Y K +RV + ++F + +D + WN++++G V+
Sbjct: 125 GLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVK 184
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N FDE + F M+ I + ++++P A L L LG + ++ GF + ++
Sbjct: 185 NSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L +Y+KCG I AR +F ++ D+VS+ A+I G + ++ LF+++ G
Sbjct: 245 ITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE 304
Query: 240 KPNSVAFVAVL 250
K NS + V ++
Sbjct: 305 KVNSSSIVGLI 315
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+WN +I G +G EALN+ +M + + P T SVL + V +G
Sbjct: 470 MPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGCV 118
EI + HG + + ++++ + ++ + +PV+ W +++ C+
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACM 589
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 320/514 (62%), Gaps = 3/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWN++I G +R L+ +++KP+ T+ S++ + +D G
Sbjct: 100 MPHKDLVSWNSLISGFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDA--G 156
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG+ I+ G V + +SLINMY K + + RLF +P + +SWNSIIA V N
Sbjct: 157 KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTN 216
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G EG+ +F +M I+ + +++ AC HL L + +HG + GF + IA
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLD YAK G + + +F ++ D V+WTA++ G A HG +AI LFE M G++
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F +L+ACSH+GL+++ SYFN M++ YGI P +HY+ + DLLGR G L +AYE
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P VW LL ACRVH N+EL +VAE + ++P + Y++LSN Y+A+R
Sbjct: 397 VIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKDAA +R ++ +G+K+TP S IE NK + F GD+SHP +I L+ELL ++ +
Sbjct: 457 WKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRK 516
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY T+ VL DVEEE K++++ HSE+LAI FG++ + +G + I KNLR+CGDCH+
Sbjct: 517 AGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHST 576
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K IS I +R II+RD RFHHF DG CSC DYW
Sbjct: 577 AKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 150/322 (46%), Gaps = 22/322 (6%)
Query: 21 LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
L + ++VRQ P++ +S++L + +EIH + L + IG
Sbjct: 24 LLHRSFHLVRQCAT----PEAI-VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGD 78
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG---CVQNGLFDEGLKFFRQMLIAK 137
L+ Y K ED+ +LF +P KD +SWNS+I+G C+ L F+
Sbjct: 79 QLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSL----TAFYTMKFEMS 134
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+KP V+ S++ AC+ L GK +HG I+ G + +A+SL++MY K G++ A
Sbjct: 135 VKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSAC 192
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+F+ + + VSW ++I +G A + I F +M + G++ + +A+L AC H G
Sbjct: 193 RLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG 252
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLT 316
+ K + + G A+ D + G+L +Y + + G + V W
Sbjct: 253 -VGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEV--GFADRVAWTA 309
Query: 317 LLSACRVHKNVELAGKVAEKIF 338
+L+ H G+ A K+F
Sbjct: 310 MLAGYAAHG----LGREAIKLF 327
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 324/514 (63%), Gaps = 7/514 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI-FADYVDVIKGK 61
V +VSW +I G +NG ++A+N+ M +KP+ FT S++L + A ++
Sbjct: 368 VQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFIS----- 422
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
EIH I+ + + +G++L++ + K + D+ ++F L+ KD I+W++++AG Q G
Sbjct: 423 EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAG 482
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E K F Q+ IKP +F SI+ AC A ++ GKQ H I+ ++ + ++
Sbjct: 483 ETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVS 542
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+ +YAK GNI A IF + D+VSW ++I G A HG A A+ +FE+M+K ++
Sbjct: 543 SSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLE 602
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+++ F+ V++AC+HAGL+ K +YFN M D+ I P+ EHY+ + DL RAG L +A +
Sbjct: 603 VDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMD 662
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I+ M P VW +L+A RVH+N+EL AEKI ++P + AYV+LSN YAAA
Sbjct: 663 IINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGN 722
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + ++R M + +KK P SWIEVKNK Y+F+AGD SHP I L EL R+
Sbjct: 723 WHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRD 782
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PDT V HD+E+EQK+ +L +HSERLAI FG+I T ++I+KNLRVCGDCH+
Sbjct: 783 VGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSF 842
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +S + +R I+VRD++RFHHF+ G CSCGDYW
Sbjct: 843 IKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 167/322 (51%), Gaps = 7/322 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P+ DL N ++ +R +EAL++ + L PDS+T+S VL + A + G+
Sbjct: 63 PLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGE 122
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H ++ GL ++ +G+SL++MY K V D R+F + +D +SWNS++ G N
Sbjct: 123 QVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNR 182
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
D+ + F M + +P + + S+++ A A+ + +G Q+H +++ GF+ + +
Sbjct: 183 FNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCN 242
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ M +K G +R AR +FD M+ D VSW ++I G+ ++G +A F M+ G KP
Sbjct: 243 SLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKP 302
Query: 242 NSVAFVAVLTACS---HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
F +V+ +C+ GL+ + T G++ + A+ L + ++ +A
Sbjct: 303 THATFASVIKSCASLKELGLV----RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDA 358
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
+ S MH + W ++S
Sbjct: 359 FSLFSLMHGVQSVVSWTAMISG 380
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 168/340 (49%), Gaps = 10/340 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G NG EA M KP T +SV+ A ++
Sbjct: 264 MENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV 323
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQ 119
+ +H ++ GL N + ++L+ KC ++D+ LF L+ V+ +SW ++I+G +Q
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQ 383
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH--LGKQLHGCIIRNGFDDNM 177
NG D+ + F M +KP H ++S+I LT H ++H +I+ ++ +
Sbjct: 384 NGDTDQAVNLFSLMRREGVKPNHFTYSTI------LTVQHAVFISEIHAEVIKTNYEKSS 437
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++LLD + K GNI A +F+ ++ D+++W+A++ G A G +A +F Q+ ++
Sbjct: 438 SVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTRE 497
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+KPN F +++ AC+ + F++ + + +++ L + G ++
Sbjct: 498 GIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIES 557
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
A+E + W +++S H + A +V E++
Sbjct: 558 AHEIFKRQKERDLVS-WNSMISGYAQHGQAKKALEVFEEM 596
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/510 (41%), Positives = 321/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+S N +I G NG E+++ + +++ + + S T+ ++P+++ + IH
Sbjct: 96 DLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIH 155
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ G+ ++ + ++L +Y + + + +LF K SWN++I+GC QNGL D
Sbjct: 156 GFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTD 215
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F+ M + P V+ +SI+ ACA + L LG+ +H I N F+ N++++++L+
Sbjct: 216 AAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALI 275
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I +AR +FD M + V+W A+I G LHG+ +A+ LF M VKP +
Sbjct: 276 DMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGL 335
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++VL ACSHAGL+ + F++M D+G P EHYA + D+LGRAG+L++A EFI
Sbjct: 336 TFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKA 395
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW LL AC +HK+ LA +EK+F +DP N+G YV++SN Y+ R++ A
Sbjct: 396 MPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQA 455
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R + K + KTP C+ IE+ + F +GD+SHP I L +L +M + G+
Sbjct: 456 ASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQ 515
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+T VLHD+EEE+K+ + HSE+LAI FG+I T G IRIIKNLRVC DCH KF+
Sbjct: 516 TETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFL 575
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 576 SKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 168/331 (50%), Gaps = 13/331 (3%)
Query: 12 VIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
+I G +N +E+++ + M GN + D T+ +VLP A+ ++ G +I AI+
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGN-GPRFDLTTVIAVLPAVAELQELKLGMQILCLAIK 59
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G ++V + + LI++++KC VE + LF + KD IS N++I+G NG ++ ++
Sbjct: 60 CGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRL 119
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F+++L + + + ++P + +L +HG ++ G + ++++L +Y +
Sbjct: 120 FKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
+ AR +FD+ + SW A+I G +G AISLF+ M+K+ V PN V ++
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L+AC+ G + + +S+ K + A+ D+ + G + A E M P
Sbjct: 240 LSACAQIGALSLG-EWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLM---P 295
Query: 310 TEN--VWLTLLSACRVHKNVELAGKVAEKIF 338
+N W ++S +H + G+ A K+F
Sbjct: 296 EKNEVTWNAMISGYGLHGH----GQEALKLF 322
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/510 (42%), Positives = 316/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+++SW +I G A G +A + QM N KP T SS+L + +GK++
Sbjct: 652 NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVI 711
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ + G + + +G++LI+ Y+K + D+ ++F +P +D +SWN +IAG QNGL
Sbjct: 712 AHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGG 771
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+F QM + SF SI+ AC+ + L GK++H I++ ++ + ++L+
Sbjct: 772 TALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALI 831
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG++ A+ +FD ++V+W A+I A HG A A+ F M+K+G+KP+
Sbjct: 832 SMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGS 891
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L+AC+H+GL+ + F+S+ +G++P+ EHY + LLGRAG+ QEA I+
Sbjct: 892 TFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQ 951
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLL ACR+H NV LA A ++ N YV+LSN YAAA RW D
Sbjct: 952 MPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDV 1011
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M +G++K P SWIEV N + F+A D+SHP I E LK L ME+ GY
Sbjct: 1012 AKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYS 1071
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ VLH++++E ++ L HSERLAI +G++ TP GT IRI KNLR+CGDCHTA KFI
Sbjct: 1072 PDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFI 1131
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+V REII RD++RFH F++GKCSC D+W
Sbjct: 1132 SKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 169/301 (56%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V +N +I LA++G YEEA QM + + + T SVL + + G+ IH
Sbjct: 349 DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIH 408
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G ++V IG+SLI+MYA+C + + LF +P +D ISWN+IIAG +
Sbjct: 409 SHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRG 468
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E +K ++QM +KP V+F ++ AC + + GK +H I+R+G N +A++L+
Sbjct: 469 EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALM 528
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY +CG+I A+ +F+ DI+SW ++I G+A HG+ A LF +M+K+G++P+ +
Sbjct: 529 NMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKI 588
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +VL C + ++ + + + G+ A+ ++ R G LQ+AYE +
Sbjct: 589 TFASVLVGCKNPEALELG-RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHS 647
Query: 305 M 305
+
Sbjct: 648 L 648
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 148/262 (56%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DL+SWN +I G AR EA+ + +QM + +KP T +L + G
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH +R G+ +N + ++L+NMY +C + ++ +F +D ISWNS+IAG Q+
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQH 565
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ K F +M ++P ++F+S++ C + L LG+Q+H II +G ++ +
Sbjct: 566 GSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLG 625
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY +CG+++ A +F + +++SWTA+I G A G A LF QM+ DG K
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFK 685
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P F ++L AC + +D+
Sbjct: 686 PVKSTFSSILKACMSSACLDEG 707
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 1/300 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN++I G A++G YE A + +M L+PD T +SVL + + G++IH
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I GL +V +G++LINMY +C ++D++ +F L ++ +SW ++I G G
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR 670
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F QM KP +FSSI+ AC L GK++ I+ +G++ + + ++L+
Sbjct: 671 KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
Y+K G++ AR +FDKM DI+SW +I G A +G A+ QM++ GV N
Sbjct: 731 SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+FV++L ACS +++ + K + AA+ + + G L+EA E N
Sbjct: 791 SFVSILNACSSFSALEEGKRVHAEIVKR-KMQGDVRVGAALISMYAKCGSLEEAQEVFDN 849
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 171/329 (51%), Gaps = 2/329 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VS+NT++ A+ EE + + QM + + PD T ++L F + +GK IH
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIH 307
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A+ GL++++ +G++L M+ +C V + + +D + +N++IA Q+G ++
Sbjct: 308 KLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYE 367
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + + QM + ++ S++ AC+ L G+ +H I G ++ I +SL+
Sbjct: 368 EAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLI 427
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYA+CG++ AR +F+ M D++SW A+I G A + +A+ L++QM+ +GVKP V
Sbjct: 428 SMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRV 487
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L+AC+++ + + GI + A+ ++ R G + EA
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEG 546
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKV 333
A + W ++++ H + E A K+
Sbjct: 547 TRARDIIS-WNSMIAGHAQHGSYEAAYKL 574
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SWN++I A+ G ++A + +M P T S+L ++ G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH I G + + +SL+NMY KC + + ++F + +D +S+N+++ Q
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E + F QM I P V++ +++ A + L GK++H + G + ++ +
Sbjct: 263 AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVG 322
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L M+ +CG++ A+ + D+V + A+I A HG+ +A + QM DGV
Sbjct: 323 TALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVV 382
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N +++VL ACS + + A +S + G + + ++ + R G L A E
Sbjct: 383 MNRTTYLSVLNACSTSKALG-AGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441
Query: 301 FISNM 305
+ M
Sbjct: 442 LFNTM 446
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 11/259 (4%)
Query: 52 ADYVDVIK----------GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
A YVD+++ K IH + G+ ++ + + LINMY KC V D+H++F
Sbjct: 83 AAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLK 142
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P +D ISWNS+I+ Q G + + F +M A P +++ SI+ AC L G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K++H II G+ + + +SLL+MY KC ++ AR +F + D+VS+ ++ A
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
+ I LF QM +G+ P+ V ++ +L A + ++D+ + + + G+
Sbjct: 263 AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG-KRIHKLAVNEGLNSDIRV 321
Query: 282 YAAVADLLGRAGKLQEAYE 300
A+A + R G + A +
Sbjct: 322 GTALATMFVRCGDVAGAKQ 340
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 6/245 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SWN +I G A+NGL AL QM + + F+ S+L + + + +G
Sbjct: 749 MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEG 808
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H ++ + +V +G++LI+MYAKC +E++ +F K+ ++WN++I Q+
Sbjct: 809 KRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQH 868
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
GL + L FF M IKP +F+SI+ AC H + G ++ + ++G +
Sbjct: 869 GLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEH 928
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
L+ + + G + A + ++M D W ++ +HGN ++L E +
Sbjct: 929 YGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGN----VALAEHAANNA 984
Query: 239 VKPNS 243
+K N+
Sbjct: 985 LKLNA 989
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 320/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L +WN +I GL + EE L++ R+M + PD +TL SV A V G
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGYAI++GL+ ++ + SSL +MY + +++D + +PV++ ++WN++I G QN
Sbjct: 111 QQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L ++ M I+ +P ++F +++ +C+ L G+Q+H I+ G + +
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
SSL+ MY+KCG + A F + + D V W+++I HG +AI LF M E+ +
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEM 290
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ N VAF+ +L ACSH+GL DK F+ M + YG P +HY V DLLGRAG L +A
Sbjct: 291 EVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M P +W TLLSAC +HKN E+A KV ++I IDPN+ YV+L+N +A+A+
Sbjct: 351 AIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAK 410
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D + +R MR+K +KK SW E K + + F GD+S I LKEL M+
Sbjct: 411 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 470
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+GY PDT VLHD++EE+K++ L HSE+LA+ F ++ P+G IRIIKNLRVC DCH
Sbjct: 471 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 530
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I+ REI +RD SRFHHF +GKCSCGDYW
Sbjct: 531 AFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 6/262 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LIN Y + + + ++F +P + +WN++IAG +Q +EGL FR+M P
Sbjct: 31 LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+ S+ A L ++ +G+Q+HG I+ G + ++ + SSL MY + G ++ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
M + ++V+W +IMGNA +G + L++ M+ G +PN + FV VL++CS + +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
K G + +++ + + G L +A + S E +W +++SA
Sbjct: 211 GQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAY 268
Query: 322 RVH----KNVELAGKVAEKIFM 339
H + ++L +AE+ M
Sbjct: 269 GFHGQGDEAIKLFNSMAEQTEM 290
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 317/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW +I G +G + EA+ +++ + LKPDSF+L VL A D G
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y G+ NV + +SL++MY KC +E ++ +F +P KD +SW+++I G N
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL + L F QM +KP + ++ ACA L L LG + RN F N +
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+KCG++ A IF M D V W A+++G +++G+A SLF +EK G++
Sbjct: 355 TALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR 414
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +L C+H G +++ +FN+M + + + PS EHY + DLLGRAG L EA++
Sbjct: 415 PDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ 474
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I+NM P VW LL C++HK+ LA +V +K+ ++P N G YV LSN Y+ R
Sbjct: 475 LINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHR 534
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++A +R M+ + ++K ACSWIE+ + F+ GDKSH +I L EL ++
Sbjct: 535 WEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKA 594
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VP T+ VL D+EEE+K++ L YHSE+LA+ FG+I +P IR++KNLRVCGDCH A
Sbjct: 595 VGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDA 654
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKI +REII+RD +RFH F DG CSC DYW
Sbjct: 655 IKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 164/298 (55%), Gaps = 3/298 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I GL +++A+++ M P++FT+ VL A +DV G +IH +
Sbjct: 82 WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G D +V + +SL+++Y KC +D+ ++F +P K+ +SW +II G + +G F E +
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIG 201
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F+++L +KP S ++ ACA L G+ + I +G N+F+A+SLLDMY
Sbjct: 202 AFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYV 261
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ A IF M DIVSW+ +I G A +G A+ LF QM+ + +KP+ V
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
VL+AC+ G +D W+ ++ P A+ D+ + G + +A+E + M
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAM 377
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K +H ++R D + ++ + +L G+ ++ +F ++ +I W +I G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
DAI L+ M G PN+ VL AC+
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACA 125
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 323/511 (63%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SW TVI A+N + EAL ++R++ + D+ + S L + + KE+H
Sbjct: 278 DLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVH 337
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY ++ GL +++ + + +I++YA C + + R+F + KD +SW S+I+ V NGL +
Sbjct: 338 GYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLAN 396
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F M ++P ++ SI+ A A L+ L+ GK++HG I R GF +SL+
Sbjct: 397 EALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLV 456
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYA CG++ A +F +V WT +I +HG A+ LF ME + P+ +
Sbjct: 457 DMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHI 516
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+A+L ACSH+GLI++ +M Y + P EHYA + DLLGRA L+EAY F+ +
Sbjct: 517 TFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKS 576
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT VW L ACR+H N +L A+K+ +DP++ G+YV++SN +AA+ RWKD
Sbjct: 577 MQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDV 636
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE-GY 423
+R+ M+ G+KK P CSWIEV NK + F+ DKSHP ++I + L ++ E++E+E GY
Sbjct: 637 EEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGY 696
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP TK VLH+V +E+K +LY HSERLAI +G++ T +GT IRI KNLRVC DCHT K
Sbjct: 697 VPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKL 756
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SK +RE+IVRD SRFHHFEDG CSCGD+W
Sbjct: 757 VSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 143/251 (56%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+VSWN++I + NG EAL + R+M + +++TL + L D G EI
Sbjct: 75 NDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEI 134
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++ +V + ++L+ M+ + ++ + R+F L KD I+WNS+IAG QNGL+
Sbjct: 135 HAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLY 194
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L+FF + A +KP VS SI+ A L L GK++H ++N D N+ I ++L
Sbjct: 195 NEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTL 254
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMY+KC + A +FDKM D++SWT VI A + +A+ L +++ G+ ++
Sbjct: 255 IDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDT 314
Query: 244 VAFVAVLTACS 254
+ + L ACS
Sbjct: 315 MMIGSTLLACS 325
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 123/221 (55%), Gaps = 1/221 (0%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
DSFT VL D+ +G EIHG I+ G D+ V + +SL++MYAKC + + +LF
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 100 CLLPVK-DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
+ + D +SWNSII+ NG E L FR+M A + + + + AC +
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
LG ++H I+++ ++++A++L+ M+ + G + A IFD++D D ++W ++I G
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGF 188
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+G ++A+ F ++ +KP+ V+ +++L A G +
Sbjct: 189 TQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYL 229
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 317/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW +I G +G + EA+ +++ + LKPDSF+L VL A D G
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y G+ NV + +SL++MY KC +E ++ +F +P KD +SW+++I G N
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL + L F QM +KP + ++ ACA L L LG + RN F N +
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+KCG++ A IF M D V W A+++G +++G+A SLF +EK G++
Sbjct: 355 TALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR 414
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +L C+H G +++ +FN+M + + + PS EHY + DLLGRAG L EA++
Sbjct: 415 PDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ 474
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I+NM P VW LL C++HK+ LA +V +K+ ++P N G YV LSN Y+ R
Sbjct: 475 LINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHR 534
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++A +R M+ + ++K ACSWIE+ + F+ GDKSH +I L EL ++
Sbjct: 535 WEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKA 594
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VP T+ VL D+EEE+K++ L YHSE+LA+ FG+I +P IR++KNLRVCGDCH A
Sbjct: 595 VGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDA 654
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKI +REII+RD +RFH F DG CSC DYW
Sbjct: 655 IKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 164/298 (55%), Gaps = 3/298 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I GL +++A+++ M P++FT+ VL A +DV G +IH +
Sbjct: 82 WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G D +V + +SL+++Y KC +D+ ++F +P K+ +SW +II G + +G F E +
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIG 201
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F+++L +KP S ++ ACA L G+ + I +G N+F+A+SLLDMY
Sbjct: 202 AFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYV 261
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ A IF M DIVSW+ +I G A +G A+ LF QM+ + +KP+ V
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
VL+AC+ G +D W+ ++ P A+ D+ + G + +A+E + M
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAM 377
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K +H ++R D + ++ + +L G+ ++ +F ++ +I W +I G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
DAI L+ M G PN+ VL AC+
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACA 125
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 319/514 (62%), Gaps = 3/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWN++I G +R L+ +++KP+ T+ S++ +D G
Sbjct: 100 MPHKDLVSWNSLISGFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDA--G 156
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG+ I+ G V + +SLINMY K + + RLF +P + +SWNSIIA V N
Sbjct: 157 KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTN 216
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G EG+ +F +M I+ + +++ AC HL L + +HG + GF + IA
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLD YAK G + + +F ++ D V+WTA++ G A HG +AI LFE M G++
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F +L+ACSH+GL+++ SYFN M++ YGI P +HY+ + DLLGR G L +AYE
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P VW LL ACRVH N+EL +VAE + ++P + Y++LSN Y+A+R
Sbjct: 397 VIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKDAA +R ++ +G+K+TP S IE NK + F GD+SHP +I L+ELL ++ +
Sbjct: 457 WKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRK 516
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY T+ VL DVEEE K++++ HSE+LAI FG++ + +G + I KNLR+CGDCH+
Sbjct: 517 AGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHST 576
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K IS I +R II+RD RFHHF DG CSC DYW
Sbjct: 577 AKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 22/322 (6%)
Query: 21 LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
L + ++VRQ P++ +S++L + +EIH + L + IG
Sbjct: 24 LLHRSFHLVRQCAT----PEAI-VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGD 78
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG---CVQNGLFDEGLKFFRQMLIAK 137
L+ Y K ED+ +LF +P KD +SWNS+I+G C+ L F+
Sbjct: 79 QLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSL----TAFYTMKFEMS 134
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+KP V+ S++ AC L GK +HG I+ G + +A+SL++MY K G++ A
Sbjct: 135 VKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSAC 192
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+F+ + + VSW ++I +G A + I F +M + G++ + +A+L AC H G
Sbjct: 193 RLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG 252
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLT 316
+ K + + G A+ D + G+L +Y + + G + V W
Sbjct: 253 -VGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEV--GFADRVAWTA 309
Query: 317 LLSACRVHKNVELAGKVAEKIF 338
+L+ H G+ A K+F
Sbjct: 310 MLAGYAAHG----LGREAIKLF 327
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/541 (40%), Positives = 330/541 (60%), Gaps = 33/541 (6%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
LV++N +I G GLY+EAL +VR+M + ++ D FT SV+ A+ + GK++H
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHA 310
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV------- 118
Y +R D + +SL+ +Y KC + ++ +F +P KD +SWN++++G V
Sbjct: 311 YVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 119 ------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+NG +EGLK F M +P +FS + +CA
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L G+Q H +++ GFD ++ ++L+ MYAKCG + A+ +F M D VSW A+
Sbjct: 430 LGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNAL 489
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I HG+ +A+ ++E+M K G++P+ + F+ VLTACSHAGL+D+ YFNSM Y
Sbjct: 490 IAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYR 549
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
I P +HYA + DLL R+GK EA I ++ PT +W LLS CRVH N+EL A
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
+K+F + P + G Y++LSN YAA +W++ A +R MR++G+KK ACSWIE++ + + F
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEE-QKKNLLYYHSERLAIV 453
+ D SHP + + L++L + M + GYVPDT VLHDVE + K+++L HSE++A+
Sbjct: 670 LVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVA 729
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG++ P GTTIRI KNLR CGDCH +F+SK+VQR+II+RD RFHHF +G+CSCG++
Sbjct: 730 FGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNF 789
Query: 514 W 514
W
Sbjct: 790 W 790
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 185/423 (43%), Gaps = 75/423 (17%)
Query: 2 PVS--DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
PVS D V +N +I G + N A+N+ +M + KPD FT +SVL A VD K
Sbjct: 107 PVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEK 166
Query: 60 G-KEIHGYAIRHGLDANVCIGSSLINMYAKCAR----VEDSHRLFCLLPVKDAISWNSII 114
+ H A++ G + ++L+++Y++CA + + ++F +P KD SW +++
Sbjct: 167 QCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMM 226
Query: 115 AGCVQNGLFD--------------------------------EGLKFFRQMLIAKIKPRH 142
G V+NG FD E L+ R+M+ + I+
Sbjct: 227 TGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDE 286
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
++ S++ ACA+ L LGKQ+H ++R D + +SL+ +Y KCG AR IF+K
Sbjct: 287 FTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEK 345
Query: 203 MDLHDIVSWTAV-------------------------------IMGNALHGNAHDAISLF 231
M D+VSW A+ I G A +G + + LF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M+++G +P AF + +C+ G + + K G S A+ + +
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVK-IGFDSSLSAGNALITMYAK 464
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYV 349
G ++EA + M + + W L++A H + A V E++ I P+ +
Sbjct: 465 CGVVEEAQQVFRTMPCLDSVS-WNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLT 523
Query: 350 ILS 352
+L+
Sbjct: 524 VLT 526
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +I GLA NG EE L + M +P + S + A G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H ++ G D+++ G++LI MYAKC VE++ ++F +P D++SWN++IA Q+
Sbjct: 437 QQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQH 496
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-----IRNGFDD 175
G E + + +ML I+P ++F +++ AC+H + G++ + I G D
Sbjct: 497 GHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH 556
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ L+D+ + G A I + + W A++ G +HGN
Sbjct: 557 ----YARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
T+L L + +HG II GF + I + L+D+Y K + AR +FD++ D ++ T ++
Sbjct: 28 TSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMV 87
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G G+ A S+FE E ++V + A++T SH A + F M K G
Sbjct: 88 SGYCASGDIALARSVFE--ETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGF 144
Query: 276 APSFEHYAAV 285
P YA+V
Sbjct: 145 KPDDFTYASV 154
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+++++ Y + + +F PV +D + +N++I G N + F +M
Sbjct: 84 TTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 138 IKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN---- 192
KP +++S++ A + Q H +++G ++++L+ +Y++C +
Sbjct: 144 FKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSL 203
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR +FD + D SWT ++ G +G L + M+++ VA+ A+++
Sbjct: 204 LHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDEN---MKLVAYNAMISG 260
Query: 253 CSHAGLIDKAWSYFNSMTK-----DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+ GL +A M D PS A A LL + GK AY +
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLL-QLGKQVHAYVLRREDFS 319
Query: 308 GPTENVWLTLLSAC 321
+N +TL C
Sbjct: 320 FHFDNSLVTLYYKC 333
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/514 (40%), Positives = 333/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL + + EEAL + +M ++ PD ++L SVL A ++ G
Sbjct: 161 MPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAG 220
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y ++ G + N+ +G SL +MY K + D R+ +P ++WN++++G Q
Sbjct: 221 QQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQK 280
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+ L + M +A +P ++F S++ +C+ L L GKQ+H ++ G + +
Sbjct: 281 GYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVV 340
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+ MY++CG ++ + F + D+V W+++I HG +AI LF +ME++ +
Sbjct: 341 SSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLP 400
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F+++L ACSH GL DK F+ M K YG+ +HY + DLLGR+G L+EA
Sbjct: 401 GNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEA 460
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M +W TLLSAC++HKN E+A +VA+++ IDP + +YV+L+N Y++A R
Sbjct: 461 MIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANR 520
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ + +R M++K +KK P SW+EVKN+ + F GD+ HP + IN+ L+EL +++
Sbjct: 521 WQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKR 580
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GYVPDT VLHD++ E+K+ +L +HSE+LAI F ++ TP+G IR++KNLRVC DCH A
Sbjct: 581 QGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVA 640
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+IS+I + EIIVRD+SRFHHF++G CSCGDYW
Sbjct: 641 IKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 91/178 (51%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+I Y +E + LF +P ++ +WN+++ G + + +E L F +M P
Sbjct: 141 MIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPD 200
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
S S++ CAHL L G+Q+H +++ GF+ N+ + SL MY K G++ + +
Sbjct: 201 EYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVIN 260
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
M +V+W ++ G A G + + M+ G +P+ + FV+V+++CS ++
Sbjct: 261 WMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAIL 318
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 24/199 (12%)
Query: 119 QNGLFDEGLKFFRQM------------LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
QNG F +G + F + +++I FS+++ AC L ++ LGKQLH
Sbjct: 34 QNGRFSDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHS 93
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
I +G + FI++ LL++Y+K G ++ A +FD+M +I+S +I GN
Sbjct: 94 LIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLES 153
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK------DYGIAPSFE 280
A +LF++M N + A++T + + ++A F+ M + +Y +
Sbjct: 154 AKNLFDEMPDR----NVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLR 209
Query: 281 HYAAVADLLGRAGKLQEAY 299
A + LL AG+ AY
Sbjct: 210 GCAHLGALL--AGQQVHAY 226
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 317/513 (61%), Gaps = 8/513 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D+ +W V+ G A+NG+ EEA + M N + + ++++ + + + K
Sbjct: 251 PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAK 306
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ NV ++++ YA+ +E++ +F +P KDA+SW +++A Q G
Sbjct: 307 ELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L+ F +M +F+ ++ CA + L G QLHG +IR G+ F+ +
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MY KCGN+ AR F++M+ D+VSW +I G A HG +A+ +F+ M KP
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + V VL ACSH+GL++K SYF SM D+G+ EHY + DLLGRAG+L EA++
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ +M P +W LL A R+H+N EL AEKIF ++P N G YV+LSN YA++ +W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DA +RV M +G+KK P SWIEV+NK + F AGD HP +I L++L RM++
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV T VLHDVEEE+K+++L YHSE+LA+ +GI+ P G IR+IKNLRVCGDCH A
Sbjct: 663 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 722
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS I R I++RD++RFHHF G CSCGDYW
Sbjct: 723 KYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++ ++ G EE L + +MG + + VL AD + G
Sbjct: 343 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 402
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG IR G +G++L+ MY KC +ED+ F + +D +SWN++IAG ++
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M KP ++ ++ AC+H + G + + G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEH 522
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A + M D W A++ + +H N S E++ +
Sbjct: 523 YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFE-- 580
Query: 239 VKPNSVAFVAVLT 251
++P + +L+
Sbjct: 581 LEPENAGMYVLLS 593
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D VSWN ++ RNG EEA R + N + D+ + ++++ + + + + +
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDAISWNALMSGYVQWGKMSEAR 213
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ + G D V + +++ YA+ + ++ RLF PV+D +W ++++G QNG
Sbjct: 214 EL--FDRMPGRD--VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +E + F M + VS+++++ A + K+L + N+ +
Sbjct: 270 MLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWN 321
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
++L YA+ G + A+ +FD M D VSW A++ + G + + + LF +M + G
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 242 NSVAFVAVLTACS 254
N AF VL+ C+
Sbjct: 382 NRSAFACVLSTCA 394
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 34/324 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++N ++ G + NG A ++ R + +PD+++ +++L A +
Sbjct: 64 MPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----RPDNYSYNTLLHALAVSSSLADA 119
Query: 61 KEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + +R + NV I S +A V + F L P KDA+SWN ++A V+
Sbjct: 120 RGLFDEMPVRDSVTYNVMISS-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 174
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMF 178
NG +E R + ++ + +S++++M + ++L + R+ N+
Sbjct: 175 NGRVEEA----RGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++ YA+ G++ AR +FD + D+ +WTAV+ G A +G +A +F+ M +
Sbjct: 231 VSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER- 284
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
N+V++ A++ A ++D+A FN M + + + +AG L+EA
Sbjct: 285 ---NAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGMLEEA 336
Query: 299 YEFISNMHAGPTENV--WLTLLSA 320
M P ++ W +L+A
Sbjct: 337 KAVFDTM---PQKDAVSWAAMLAA 357
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
L+ V + I + + RV D+ RLF +P + ++N+++AG NG FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKC 190
A +P + S+++++ A A ++L + L + +R+ N+ I+S +A
Sbjct: 94 ----AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANH 144
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF-EQMEKDGVKPNSVAFVAV 249
G + LAR FD D VSW ++ +G +A LF + E D + N A+
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWN-----AL 199
Query: 250 LTACSHAGLIDKAWSYFNSM 269
++ G + +A F+ M
Sbjct: 200 MSGYVQWGKMSEARELFDRM 219
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/510 (41%), Positives = 312/510 (61%), Gaps = 2/510 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK-GKEIH 64
+VSW +I G R+ EE + +M N+ P+ T+ S++ + + ++ GK++H
Sbjct: 263 VVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI-VECGFTGALQLGKQLH 321
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y +R+G ++ + ++L++MY KC+ + ++ LF +D + W ++++ Q D
Sbjct: 322 AYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCID 381
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F QM + ++P V+ S++ CA L LGK +H I + + + + ++L+
Sbjct: 382 QAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALV 441
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I A +F + DI W A+I G A+HG +A+ +F +ME+ GVKPN +
Sbjct: 442 DMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDI 501
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L ACSHAGL+ + F M +G+ P EHY + DLLGRAG L EA+E I +
Sbjct: 502 TFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKS 561
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW L++ACR+HKN +L A ++ I+P N G V++SN YAAA RW DA
Sbjct: 562 MPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDA 621
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M+ GMKK P S IEV + F+ GD+SHP RINE L E+ ++ + GYV
Sbjct: 622 AGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYV 681
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT VL +++EE+K+ L YHSE+LA+ FG+I T T IRI+KNLRVC DCH A K +
Sbjct: 682 PDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLL 741
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R IIVRD +RFHHF +G CSCGDYW
Sbjct: 742 SKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 158/258 (61%), Gaps = 2/258 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+T+I L+RN ++ AL ++R+M + ++P + S++ +FAD ++ GK +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 65 GYAIRHGLDANVCIGSS--LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
Y IR+ + ++ + ++ L++MYAKC + + +LF L K +SW ++IAGC+++
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+EG K F +M I P ++ S++ C L LGKQLH I+RNGF ++ +A++
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMY KC +IR AR +FD D++ WTA++ A A +LF+QM GV+P
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398
Query: 243 SVAFVAVLTACSHAGLID 260
V V++L+ C+ AG +D
Sbjct: 399 KVTIVSLLSLCAVAGALD 416
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 152/286 (53%), Gaps = 12/286 (4%)
Query: 41 SFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC 100
+F SVL GKEIHG+ ++ GLD +V +G++L+ MY +CA VE + +F
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
+ +D +SW+++I +N FD L+ R+M +++P V+ S++ A + +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 161 GKQLHGCIIRNGFDDNMFI--ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
GK +H +IRN +++M + ++LLDMYAKCG++ LAR +F+ + +VSWTA+I G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ LF +M+++ + PN + ++++ C G + + ++ G + S
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN-GFSVS 332
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN----VWLTLLSA 320
A+ D+ G+ ++ A + T+N +W +LSA
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDS-----TQNRDVMIWTAMLSA 373
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++ W ++ A+ ++A N+ QM ++P T+ S+L + A + GK +H
Sbjct: 363 DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVH 422
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + ++ + + ++L++MYAKC + + RLF +D WN+II G +G +
Sbjct: 423 SYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE 482
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSL 183
E L F +M +KP ++F ++ AC+H + GK+L ++ G + +
Sbjct: 483 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCM 542
Query: 184 LDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
+D+ + G + A + M + + + W A++ LH N
Sbjct: 543 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 585
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 317/513 (61%), Gaps = 8/513 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D+ +W V+ G A+NG+ EEA + M N + + ++++ + + + K
Sbjct: 251 PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAK 306
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ NV ++++ YA+ +E++ +F +P KDA+SW +++A Q G
Sbjct: 307 ELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L+ F +M +F+ ++ CA + L G QLHG +IR G+ F+ +
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MY KCGN+ AR F++M+ D+VSW +I G A HG +A+ +F+ M KP
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + V VL ACSH+GL++K SYF SM D+G+ EHY + DLLGRAG+L EA++
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ +M P +W LL A R+H+N EL AEKIF ++P N G YV+LSN YA++ +W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DA +RV M +G+KK P SWIEV+NK + F AGD HP +I L++L RM++
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV T VLHDVEEE+K+++L YHSE+LA+ +GI+ P G IR+IKNLRVCGDCH A
Sbjct: 663 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 722
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS I R I++RD++RFHHF G CSCGDYW
Sbjct: 723 KYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++ ++ G EE L + +MG + + VL AD + G
Sbjct: 343 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 402
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG IR G +G++L+ MY KC +ED+ F + +D +SWN++IAG ++
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M KP ++ ++ AC+H + G + + G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEH 522
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A + M D W A++ + +H N S E++ +
Sbjct: 523 YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFE-- 580
Query: 239 VKPNSVAFVAVLT 251
++P + +L+
Sbjct: 581 LEPENAGMYVLLS 593
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D VSWN ++ RNG EEA R + N + D + ++++ + + + + +
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 213
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ + G D V + +++ YA+ + ++ RLF PV+D +W ++++G QNG
Sbjct: 214 EL--FDRMPGRD--VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +E + F M + VS+++++ A + K+L + N+ +
Sbjct: 270 MLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWN 321
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
++L YA+ G + A+ +FD M D VSW A++ + G + + + LF +M + G
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 242 NSVAFVAVLTACS 254
N AF VL+ C+
Sbjct: 382 NRSAFACVLSTCA 394
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 34/324 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++N ++ G + NG A ++ R + +PD+++ +++L A +
Sbjct: 64 MPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----RPDNYSYNTLLHALAVSSSLADA 119
Query: 61 KEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + +R + NV I S +A V + F L P KDA+SWN ++A V+
Sbjct: 120 RGLFDEMPVRDSVTYNVMISS-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 174
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMF 178
NG +E R + ++ + +S++++M + ++L + R+ N+
Sbjct: 175 NGRVEEA----RGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++ YA+ G++ AR +FD + D+ +WTAV+ G A +G +A +F+ M +
Sbjct: 231 VSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER- 284
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
N+V++ A++ A ++D+A FN M + + + +AG L+EA
Sbjct: 285 ---NAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGMLEEA 336
Query: 299 YEFISNMHAGPTENV--WLTLLSA 320
M P ++ W +L+A
Sbjct: 337 KAVFDTM---PQKDAVSWAAMLAA 357
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 57/344 (16%)
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
L+ V + I + + RV D+ RLF +P + ++N+++AG NG FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFIAS--------- 181
A +P + S+++++ A A ++L + L + +R+ N+ I+S
Sbjct: 94 ----AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 182 -----------------SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
+L Y + G + AR +F+ D++SW A++ G G
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
+A LF++M V V++ +++ + G + +A F++ AP + +
Sbjct: 210 SEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRLFDA-------APVRDVFTW 258
Query: 285 VADLLGRA--GKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMI 340
A + G A G L+EA M P N W +++A + + + E M+
Sbjct: 259 TAVVSGYAQNGMLEEARRVFDAM---PERNAVSWNAMVAA---YIQRRMMDEAKELFNMM 312
Query: 341 DPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
N+ ++ + YA A ++A + VF M + A SW
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKA--VF---DTMPQKDAVSW 351
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/524 (40%), Positives = 327/524 (62%), Gaps = 18/524 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ +I GL + Y + +++ QM N +L PDS+ ++SVL ++ + +G+E+H +
Sbjct: 98 YTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVL 157
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP------------------VKDAISW 110
+ GL +N I LI +Y KC ED+ R+F +P +KD + W
Sbjct: 158 KLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCW 217
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
++I G V+NG + L+ FR M + P V+ ++ AC+ L L LG+ + + +
Sbjct: 218 TAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDK 277
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
+ + N F+ +L++MY++CG+I A+ +F++M +++++ ++IMG ALHG + +A+ L
Sbjct: 278 HRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVEL 337
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F + K G P+SV FV VL ACSH GL + + F+SM KDYGI P EHY + DLLG
Sbjct: 338 FRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLG 397
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
R G+L+EAY FI M P + LLSAC++H N+ELA +VA+ + + G Y++
Sbjct: 398 RLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYIL 457
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN Y+++ +WK+AA +R MR +G++K P CS IEV N+ + F+ GD HP +I +
Sbjct: 458 LSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKK 517
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L+EL + + EGY P T+ VLHD+E+ +K+ L HSERLAI +G+I T TT+R++KN
Sbjct: 518 LEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKN 577
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LRVC DCH IK IS I +R+I+VRD +RFHHFE+G CSCGDYW
Sbjct: 578 LRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 135/275 (49%), Gaps = 9/275 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D V W +I GL RNG AL + R M ++ P+ T+ VL ++ + G+
Sbjct: 211 IKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRW 270
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+ Y +H ++ N +G +LINMY++C ++++ R+F + K+ I++NS+I G +G
Sbjct: 271 VRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGK 330
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIAS 181
E ++ FR ++ P V+F ++ AC+H LG ++ + ++ G + +
Sbjct: 331 SVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYG 390
Query: 182 SLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV- 239
++D+ + G + A M + D V A++ +HGN + L E++ K V
Sbjct: 391 CMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGN----LELAERVAKSLVA 446
Query: 240 --KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
+S ++ + A S +G +A +M ++
Sbjct: 447 CKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREE 481
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 6/166 (3%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R F S++ C H + ++ IIRN + F+ LL + + +I A IF
Sbjct: 31 RRRHFISLLQNCKHNNQI---PPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIF 87
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS-HAGLI 259
++ +TA+I G L D I L+ QM + P+S A +VL AC H L
Sbjct: 88 SHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLAL- 146
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
K +S G++ + + +L G+ G ++A M
Sbjct: 147 -KEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEM 191
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 317/513 (61%), Gaps = 8/513 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D+ +W V+ G A+NG+ EEA + M N + + ++++ + + + K
Sbjct: 126 PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAK 181
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ NV ++++ YA+ +E++ +F +P KDA+SW +++A Q G
Sbjct: 182 ELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 237
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L+ F +M +F+ ++ CA + L G QLHG +IR G+ F+ +
Sbjct: 238 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 297
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MY KCGN+ AR F++M+ D+VSW +I G A HG +A+ +F+ M KP
Sbjct: 298 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 357
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + V VL ACSH+GL++K SYF SM D+G+ EHY + DLLGRAG+L EA++
Sbjct: 358 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 417
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ +M P +W LL A R+H+N EL AEKIF ++P N G YV+LSN YA++ +W
Sbjct: 418 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 477
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DA +RV M +G+KK P SWIEV+NK + F AGD HP +I L++L RM++
Sbjct: 478 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 537
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV T VLHDVEEE+K+++L YHSE+LA+ +GI+ P G IR+IKNLRVCGDCH A
Sbjct: 538 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 597
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS I R I++RD++RFHHF G CSCGDYW
Sbjct: 598 KYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++ ++ G EE L + +MG + + VL AD + G
Sbjct: 218 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 277
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG IR G +G++L+ MY KC +ED+ F + +D +SWN++IAG ++
Sbjct: 278 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 337
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M KP ++ ++ AC+H + G + + G
Sbjct: 338 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEH 397
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A + M D W A++ + +H N S E++ +
Sbjct: 398 YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFE-- 455
Query: 239 VKPNSVAFVAVLT 251
++P + +L+
Sbjct: 456 LEPENAGMYVLLS 468
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D VSWN ++ RNG EEA R + N + D + ++++ + + + + +
Sbjct: 33 PEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 88
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ + G D V + +++ YA+ + ++ RLF PV+D +W ++++G QNG
Sbjct: 89 EL--FDRMPGRD--VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 144
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +E + F M + VS+++++ A + K+L + N+ +
Sbjct: 145 MLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWN 196
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
++L YA+ G + A+ +FD M D VSW A++ + G + + + LF +M + G
Sbjct: 197 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 256
Query: 242 NSVAFVAVLTACS 254
N AF VL+ C+
Sbjct: 257 NRSAFACVLSTCA 269
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 24/242 (9%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+I+ +A V + F L P KDA+SWN ++A V+NG +E R + ++ +
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWD 67
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
+S++++M + ++L + R+ N+ ++ YA+ G++ AR +F
Sbjct: 68 VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSG-----YARRGDMVEARRLF 122
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D + D+ +WTAV+ G A +G +A +F+ M + N+V++ A++ A ++D
Sbjct: 123 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMD 178
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
+A FN M + + + +AG L+EA M P ++ W +L
Sbjct: 179 EAKELFNMMP-----CRNVASWNTMLTGYAQAGMLEEAKAVFDTM---PQKDAVSWAAML 230
Query: 319 SA 320
+A
Sbjct: 231 AA 232
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 26/223 (11%)
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH--VSFSSIMPACAHLTTLH 159
+PV+D++++N +I+ +GL +F + P VS++ ++ A +
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYF------DLAPEKDAVSWNGMLAAYVRNGRVE 54
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+ L R +D + ++L+ Y + G + AR +FD+M D+VSW ++ G A
Sbjct: 55 EARGLFNS--RTEWD--VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 110
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
G+ +A LF+ V + AV++ + G++++A F++M + ++ +
Sbjct: 111 RRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWN- 165
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
A VA + R + EA E + M P NV W T+L+
Sbjct: 166 ---AMVAAYIQRR-MMDEAKELFNMM---PCRNVASWNTMLTG 201
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/512 (42%), Positives = 321/512 (62%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA----DYVDVIKGKEIH 64
WN + LA G +E L++ QM + + D FT + VL + KGKEIH
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIH 206
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +RHG +AN+ + ++L+++YAK V ++ +FC +P K+ +SW+++IA +N +
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266
Query: 125 EGLKFFRQMLIAKIK--PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L+ F+ M++ P V+ +++ ACA L L GK +HG I+R G D + + ++
Sbjct: 267 KALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNA 326
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MY +CG I + + +FD M D+VSW ++I +HG AI +FE M G P+
Sbjct: 327 LITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
++F+ VL ACSHAGL+++ F SM Y I P EHYA + DLLGRA +L EA + I
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 446
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
+MH P VW +LL +CR+H NVELA + + +F ++P N G YV+L++ YA A+ W
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWS 506
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+A S+ + +G++K P CSWIEVK K Y+FV+ D+ +P I+ L +L M+ +G
Sbjct: 507 EAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQG 566
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVP T VL+D++EE+K+ ++ HSE+LA+ FG+I T G TIRI KNLR+C DCH K
Sbjct: 567 YVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTK 626
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 627 FISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 158/348 (45%), Gaps = 18/348 (5%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N +I L + G ++A++++ N P T ++ A + G ++H +
Sbjct: 51 NQLIQSLCKGGNLKQAIHLLCCEPN----PTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G D + + + LINMY + ++ + ++F + WN++ G E L
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDL 166
Query: 130 FRQMLIAKIKPRHVSFSSIMPACA----HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ QM I +++ ++ AC ++ L GK++H I+R+G++ N+ + ++LLD
Sbjct: 167 YVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLD 226
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNS 243
+YAK G++ A +F M + VSW+A+I A + A+ LF+ M E PNS
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNS 286
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V V VL AC+ +++ + G+ A+ + GR G++
Sbjct: 287 VTMVNVLQACAGLAALEQG-KLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFD 345
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYV 349
NM + W +L+S +H GK A +IF MI + +Y+
Sbjct: 346 NMKNRDVVS-WNSLISIYGMHG----FGKKAIQIFENMIHQGSSPSYI 388
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP + VSW+ +I A+N + +AL + + M + P+S T+ +VL A +
Sbjct: 244 MPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALE 303
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IHGY +R GLD+ + + ++LI MY +C + R+F + +D +SWNS+I+
Sbjct: 304 QGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYG 363
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+G + ++ F M+ P ++SF +++ AC+H + GK L
Sbjct: 364 MHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKIL 409
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/507 (41%), Positives = 315/507 (62%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G A+NG +AL+++ QM +PD FT+SS+L A + GKEIHGY
Sbjct: 418 SWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYV 477
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+R+GL+ + +G+SL++ Y C + + LF + K+ +SWN++I+G QNGL E L
Sbjct: 478 LRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESL 537
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FR+ L I+ ++ S+ AC+ L+ L LGK+ HG +++ ++ F+ S++DMY
Sbjct: 538 ALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMY 597
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AK G I+ +R +FD + ++ SW A+I+ + +HG+ +AI L+E+M+K G P+ ++
Sbjct: 598 AKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYI 657
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+L AC HAGL+++ YF M I P EHYA + D+L RAG+L +A ++ M
Sbjct: 658 GILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPE 717
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+W +LL +CR +E+ KVA+K+ ++P+ YV+LSN YA +W +
Sbjct: 718 EADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRV 777
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M+ G++K CSWIEV + Y+FV GD P I + L ER+ + GY P+T
Sbjct: 778 RQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNT 837
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
VLH+V EE+K ++L HSE+LAI FG++ T GTT+RI KNLR+C DCH A K ISK
Sbjct: 838 SSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKA 897
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
V+REI+VRDN RFHHF DG CSC DYW
Sbjct: 898 VEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 148/253 (58%), Gaps = 3/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG--NVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
++VSWNT+I + G EA N++++M +K + T+ +VLP D + + KE
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HGY+ RH +V + ++ I YAKC + + ++F + K SWN++I G QNG
Sbjct: 373 LHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGD 431
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L QM + +P + SS++ ACAHL +L GK++HG ++RNG + + F+ +S
Sbjct: 432 PRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTS 491
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL Y CG AR +FD+M ++VSW A+I G + +G +++++LF + +G++ +
Sbjct: 492 LLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSH 551
Query: 243 SVAFVAVLTACSH 255
+A V+V ACS
Sbjct: 552 EIAIVSVFGACSQ 564
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 146/257 (56%), Gaps = 4/257 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M +L+ WN ++ G RNGLY + + + + + + +PD+FT SV+ +DV
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG I+ GL +V +G++L+ MY KC V+++ ++F +P + +SWNS+I +
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG + +ML + + P V+ +I+P CA + +G +HG ++ G + +
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVM 284
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++++ MY+KCG + A+ F K + ++VSW +I +L G+ ++A +L ++M+ G
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQG 344
Query: 239 --VKPNSVAFVAVLTAC 253
+K N V + VL AC
Sbjct: 345 EEMKANEVTILNVLPAC 361
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 142/279 (50%), Gaps = 7/279 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDAN-VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ G+ +H + N + + LI MYA C DS +F + K+ I WN+++
Sbjct: 58 DIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALV 117
Query: 115 AGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
+G +NGL+ + +K F ++ +P + +F S++ AC + + LG+ +HG +I+ G
Sbjct: 118 SGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGL 177
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF-E 232
++F+ ++L+ MY KCG + A +FD M ++VSW ++I + +G + D+ L E
Sbjct: 178 VLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLME 237
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+ ++G+ P+ V V +L C+ G +D + + G++ A+ + +
Sbjct: 238 MLGEEGLLPDVVTVVTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKC 296
Query: 293 GKLQEA-YEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
G L EA F+ N + W T++SA + +V A
Sbjct: 297 GYLNEAQMSFVKNNNKNVVS--WNTMISAFSLEGDVNEA 333
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +LVSWN +I G ++NGL E+L + R+ + ++ + SV + + G
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE HGY ++ + +G S+I+MYAK +++S ++F L K+ SWN+II +
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
G E ++ + +M P ++ I+ AC H + G K N + +
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM 203
+ L+DM A+ G + A + ++M
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEM 715
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 324/510 (63%), Gaps = 2/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+++SW +I G ++ +EA+ + M + ++ P+ FT SSVL A D GK++H
Sbjct: 313 NVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLH 372
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G I+ GL C+G+SLINMYA+ +E + + F +L K+ IS+N+ A D
Sbjct: 373 GQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT--AADANAKALD 430
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
F ++ + +++ ++ A + T+ G+Q+H I+++GF N+ I ++L+
Sbjct: 431 SDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALI 490
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY+KCGN A +F+ M ++++WT++I G A HG A A+ LF +M + GVKPN V
Sbjct: 491 SMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEV 550
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++AVL+ACSH GLID+AW +FNSM ++ I+P EHYA + DLLGR+G L EA EFI++
Sbjct: 551 TYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINS 610
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M VW T L +CRVH+N +L A+KI +P++ Y++LSN YA+ RW D
Sbjct: 611 MPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDV 670
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A+LR M+ K + K SWIEV N+ + F GD SHP +I + L EL +++ GY+
Sbjct: 671 AALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYI 730
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T VLHDVE+EQK+ L+ HSE++A+ + +I TP IR+ KNLRVCGDCHTAIK+I
Sbjct: 731 PNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYI 790
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REI+VRD +RFHH +DGKCSC DYW
Sbjct: 791 SIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 183/358 (51%), Gaps = 14/358 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +LV+W +I ++ GL ++A+++ ++ PD FTL+S+L + G
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + IR GL ++V +G +L++MYAK A VE+S ++F + + +SW ++I+G VQ+
Sbjct: 268 KQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQS 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E +K F ML + P +FSS++ ACA L +GKQLHG I+ G +
Sbjct: 328 RQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVG 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MYA+ G + AR F+ + +++S+ NA ++ ++ + ++E GV
Sbjct: 388 NSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVG 445
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + +L+ + G I K +++ G + A+ + + G + A +
Sbjct: 446 ASPFTYACLLSGAACIGTIVKG-EQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQ 504
Query: 301 FISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYVILS 352
++M NV W +++S H K +EL ++ E + PN + +LS
Sbjct: 505 VFNDM---GYRNVITWTSIISGFAKHGFATKALELFYEMLE--IGVKPNEVTYIAVLS 557
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 138/255 (54%), Gaps = 5/255 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN---LKPDSFTLSSVLPIFADYVDVIKGK 61
DLVSW+ +I A N + AL M + + P+ + +++L ++ + G
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165
Query: 62 EIHGYAIRHG-LDANVCIGSSLINMYAKCA-RVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
I + ++ G D++VC+G +LI+M+ K ++ + +F + K+ ++W +I Q
Sbjct: 166 AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQ 225
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL D+ + F ++L+++ P + +S++ AC L LGKQLH +IR+G ++F+
Sbjct: 226 LGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFV 285
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+L+DMYAK + +R IF+ M H+++SWTA+I G +AI LF M V
Sbjct: 286 GCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHV 345
Query: 240 KPNSVAFVAVLTACS 254
PN F +VL AC+
Sbjct: 346 TPNCFTFSSVLKACA 360
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 7/201 (3%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGC 117
GK +H I GL + + +SLI +Y+KC E++ +F + +D +SW++II+
Sbjct: 58 GKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCF 117
Query: 118 VQNGLFDEGLKFFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-F 173
N + L F ML I P F++++ +C++ G + +++ G F
Sbjct: 118 ANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYF 177
Query: 174 DDNMFIASSLLDMYAKCG-NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
D ++ + +L+DM+ K G +I+ AR +FDKM ++V+WT +I + G DA+ LF
Sbjct: 178 DSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFC 237
Query: 233 QMEKDGVKPNSVAFVAVLTAC 253
++ P+ ++L+AC
Sbjct: 238 RLLVSEYTPDKFTLTSLLSAC 258
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S ++ AC L LGK LH +I +G + + +SL+ +Y+KCG+ A IF M
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 206 H--DIVSWTAVI---MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
H D+VSW+A+I N++ A Q ++ + PN F A+L +CS+
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 261 KAWSYFNSMTK 271
+ F + K
Sbjct: 163 TGLAIFAFLLK 173
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 326/515 (63%), Gaps = 10/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D SWNT+I G ++NG+ ++A R++ V +S + ++++ + + D+
Sbjct: 94 MPVKDTASWNTMISGFSQNGMMDQA----RELFLVMPVRNSVSWNAMISGYVESGDLDLA 149
Query: 61 KEIHGYA-IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K++ A +R +V +++I + K ++E + + F +P+K+ ++WN++IAG ++
Sbjct: 150 KQLFEVAPVR-----SVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIE 204
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N + GLK F++M+ + +P S SS++ C++L+ L LGKQ+H I ++ N+
Sbjct: 205 NCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITA 264
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY KCG++ A +F M D+V+W A+I G A HG A+ LF++M +G+
Sbjct: 265 GTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGM 324
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + FVAVL+AC+HAG +D YFNSM +DYG+ +HY V DLLGR GKL EA
Sbjct: 325 KPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAV 384
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I M P ++ TLL ACR+HKN+ELA A+ + +DP + YV L+N YAA
Sbjct: 385 DLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMN 444
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW A +R M++ + KTP SWIEVK+ + F +GD+ HP I+E L EL +M
Sbjct: 445 RWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMR 504
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD + LHDV EEQKK +L HSE+LAI +G+I P GT IR+ KNLRVCGDCH+
Sbjct: 505 LAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHS 564
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I R IIVRD +RFHHF G+CSCGDYW
Sbjct: 565 ATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 37/263 (14%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD---------- 53
S+++S N VI R+G AL + M + T +S+L +++
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESM----TVKTTVTWNSMLAGYSNRRGKIKVARQ 58
Query: 54 YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
D I +I Y I ++ Y A VE + F +PVKD SWN++
Sbjct: 59 LFDRIPEPDIFSYNI-------------MLACYLHNADVESARLFFDQMPVKDTASWNTM 105
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNG 172
I+G QNG+ D+ + F M + VS+++++ L L KQL +R
Sbjct: 106 ISGFSQNGMMDQARELFLVMPVRN----SVSWNAMISGYVESGDLDLAKQLFEVAPVR-- 159
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
++ ++++ + K G I LA F++M + ++V+W A+I G + A + + LF+
Sbjct: 160 ---SVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFK 216
Query: 233 QMEKDGVKPNSVAFVAVLTACSH 255
+M + G +PN + +VL CS+
Sbjct: 217 RMVESGFRPNPSSLSSVLLGCSN 239
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/574 (39%), Positives = 339/574 (59%), Gaps = 64/574 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIKGKEI 63
D+ +NT+I GL+ + AL + +M ++ PDSF+ + +L A+ + G ++
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128
Query: 64 HGYAIRHGLDANVCIGSSLINMYA-------------------------------KCARV 92
H A+ +GLD+++ +G++LI+MYA +C V
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGV 188
Query: 93 EDSHRLF-CL------------------------------LPVKDAISWNSIIAGCVQNG 121
+D+ ++F C+ +P+KD +SW+++I G NG
Sbjct: 189 KDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNG 248
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F++ FFR++ ++P VS + ++ ACA G+ LHG + ++GF + + +
Sbjct: 249 NFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNN 308
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+D Y+KCGN+ +AR +FD M VSWTA+I G A+HG +AI LF +ME+ +KP
Sbjct: 309 ALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKP 368
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+S+ F+++L ACSHAGL+D SYF+ M YGI P EHY + DL GRAGKLQ+AY+F
Sbjct: 369 DSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDF 428
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ M P + VW TLL AC +H N+ LAG+V ++ +DP N G +V+LSN YA A +W
Sbjct: 429 VCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKW 488
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
KD A+LR M ++ +KKTP S IEV Y+FVAG+K + ++ L+E++ R+ E
Sbjct: 489 KDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIE 548
Query: 422 -GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+ VLHD+E E+K++ + HSE+LA+ FG+ P G IR++KNLR+C DCHT
Sbjct: 549 GGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTV 608
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K ISK+ + EI+VRD SRFH F G CSC DYW
Sbjct: 609 MKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 129/239 (53%), Gaps = 4/239 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D VSW+T+IVG A NG + +A R++ ++P+ +L+ VL A G
Sbjct: 229 MPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG 288
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG+ + G + + ++LI+ Y+KC ++ + +F + + A+SW ++IAG +
Sbjct: 289 RILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMH 348
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E ++ F +M + IKP ++F SI+ AC+H + LG ++ G + +
Sbjct: 349 GYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEH 408
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+Y + G ++ A +M + +DIV W ++ ++HGN + A + Q+ +
Sbjct: 409 YGCMVDLYGRAGKLQQAYDFVCQMPISPNDIV-WRTLLGACSIHGNLYLAGQVKRQLSE 466
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/543 (41%), Positives = 318/543 (58%), Gaps = 35/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LV +NT++ R GL E L ++ +M +PD T+ S + ++ DV GK H
Sbjct: 305 NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCH 364
Query: 65 GYAIRHGLDA--NVCIGSSLINMYAKCAR------------------------------- 91
GY +R+GL+ NVC +++INMY KC +
Sbjct: 365 GYVLRNGLEGWDNVC--NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGD 422
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
+E + ++F +P D +SWN++I VQ +F E ++ FR M I V+ + A
Sbjct: 423 MESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASA 482
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
C +L L L K +HG I + +M + ++L+DM+A+CG+ + A +F+KM D+ +W
Sbjct: 483 CGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAW 542
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
TA I A+ GN AI LF++M + G+KP+ V FVA+LTA SH GL+++ W F SM
Sbjct: 543 TAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKD 602
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
YGIAP HY + DLLGRAG L EA I++M P + +W +LL+ACRVHKNV++A
Sbjct: 603 IYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAA 662
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
AE+I +DP G +V+LSN YA+A RW D A +R+ ++ KG K P S IE+ K
Sbjct: 663 YAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKI 722
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ F GD+SHP I LKE+ R+ GYVPD VL DV E++K+ LL HSE+LA
Sbjct: 723 FEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLA 782
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I F +I T G IR+ KNLR+C DCH+ K +SK REIIVRDN+RFH F+ G CSCG
Sbjct: 783 IAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCG 842
Query: 512 DYW 514
DYW
Sbjct: 843 DYW 845
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 136/247 (55%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
++++I G + GL +A+ + RQ+ + PD+FT VL + +G ++HG +
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + ++ + +SLI+ Y +C ++ R+F + ++ +SW S+I G + G + E +
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M+ I+P V+ ++ ACA L L LG+Q+ CI + N + ++L+DMY
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG I AR IFD+ ++V + ++ G A + +++ +M K G +P+ + ++
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 249 VLTACSH 255
++ACS
Sbjct: 347 AVSACSE 353
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 162/336 (48%), Gaps = 32/336 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G A+ G Y+EA+++ +M V ++P+S T+ V+ A D+ G
Sbjct: 200 MSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLG 259
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++ L+ N + ++L++MY KC ++ + ++F K+ + +N+I++ V+
Sbjct: 260 EQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQ 319
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L +ML +P ++ S + AC+ L + GK HG ++RNG + +
Sbjct: 320 GLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC 379
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH--------------- 225
+++++MY KCG +A +FD+M VSW ++I G +G+
Sbjct: 380 NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLV 439
Query: 226 ----------------DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+AI LF M+ +G+ + V V V +AC + G +D A + +
Sbjct: 440 SWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA-KWIHGY 498
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
K I A+ D+ R G Q A + + M
Sbjct: 499 IKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM 534
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 33/253 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP SDLVSWNT+I L + +++EA+ + R M + + D T+ V +
Sbjct: 433 MPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA 492
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHGY + + ++ +G++L++M+A+C + + ++F + +D +W + I
Sbjct: 493 KWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAME 552
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ F +ML IKP V F +++ A + HG ++ G+ I
Sbjct: 553 GNGTGAIELFDEMLQQGIKPDGVVFVALLTALS-----------HGGLVEQGWH----IF 597
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+ D+Y C+ D ++G A G +A+SL M+ ++
Sbjct: 598 RSMKDIYGIAPQAVHYGCMVD-------------LLGRA--GLLSEALSLINSMQ---ME 639
Query: 241 PNSVAFVAVLTAC 253
PN V + ++L AC
Sbjct: 640 PNDVIWGSLLAAC 652
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/523 (41%), Positives = 330/523 (63%), Gaps = 9/523 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM------GNVNLKPDSFTLSSVLPIFADY 54
+P D+VSW ++I G NG +A+++ + + + + DS L SV+ +
Sbjct: 137 IPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNS 112
+ IH + I+ G D V +G++L++ YAK V + ++F + KD +S+NS
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRH-VSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
I++ Q+G+ +E + FR+++ K+ + ++ S+++ A +H L +GK +H +IR
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +D++ + +S++DMY KCG + AR FD+M ++ SWTA+I G +HG+A A+ LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M GV+PN + FV+VL ACSHAGL + W +FN+M +G+ P EHY + DLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG LQ+AY+ I M P +W +LL+ACR+HKNVELA ++F +D +N G Y++L
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
S+ YA A RWKD +R+ M+N+G+ K P S +E+ + + F+ GD+ HP +I E L
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
EL ++ + GYV +T V HDV+EE+K+ L HSE+LAI FGI+ T G+T+ ++KNL
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVC DCH IK ISKIV RE +VRD RFHHF+DG CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 17/365 (4%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+ SWN+VI LAR+G EAL M ++L P + + + D+ GK+
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G +++ + S+LI MY+ C ++ED+ ++F +P +D +SW S+I G NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNA 158
Query: 124 DEGLKFFRQMLIAKIKPRHVSF------SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ + F+ +L+ + F S++ AC+ + L + +H +I+ GFD +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 178 FIASSLLDMYAKCGN--IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++LLD YAK G + +AR IFD++ D VS+ +++ A G +++A +F ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 236 KDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ V N++ VL A SH+G + + + + G+ ++ D+ + G+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGR 337
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
++ A + M + W +++ +H + A K E +F MID Y+
Sbjct: 338 VETARKAFDRMKNKNVRS-WTAMIAGYGMHGH---AAKALE-LFPAMIDSGVRPNYITFV 392
Query: 353 NTYAA 357
+ AA
Sbjct: 393 SVLAA 397
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/516 (42%), Positives = 325/516 (62%), Gaps = 6/516 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSWN +IV ++ EA+ + R+M LK D FT++SVL F D++ G++ H
Sbjct: 207 DEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFH 266
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCA-RVEDSHRLFCLLPVKDAISWNSIIAG-CVQNGL 122
G I+ G N +GS LI++Y+KCA + + ++F + D + WN++I+G + L
Sbjct: 267 GMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDL 326
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFIAS 181
++GL FR+M +P SF + AC++L++ LGKQ+H I++ N + + +
Sbjct: 327 SEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNN 386
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MY+KCGN+ AR +FD M H+ VS ++I G A HG +++ LFE M + + P
Sbjct: 387 ALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAP 446
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS+ F+AVL+AC H G +++ YFN M + + I P EHY+ + DLLGRAGKL+EA
Sbjct: 447 NSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERI 506
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I M P W TLL ACR H NVELA K A + ++P N YV+LSN YA+A RW
Sbjct: 507 IETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARW 566
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
++AA+++ MR +G+KK P CSWIE+ K + FVA D SHP I+ + ++L++M+Q
Sbjct: 567 EEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQA 626
Query: 422 GYVPDTKEVL---HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
GYVPD + L +VE ++++ L YHSE+LA+ FG+I T +G I ++KNLR+CGDCH
Sbjct: 627 GYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCH 686
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K IS + REI VRD RFH F++G CSC DYW
Sbjct: 687 NAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 146/260 (56%), Gaps = 7/260 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VS+NT+I A G L + ++ + L D FTLS V+ D V +++
Sbjct: 101 IPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVR- 159
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV---KDAISWNSIIAGC 117
++H + + G D + ++++ Y++ + ++ R+F + +D +SWN++I C
Sbjct: 160 -QLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVAC 218
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
Q+ E + FR+M+ +K + +S++ A + L G+Q HG +I++GF N
Sbjct: 219 GQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNS 278
Query: 178 FIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQME 235
+ S L+D+Y+KC G++ R +F+++ D+V W +I G +L+ + + D + F +M+
Sbjct: 279 HVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQ 338
Query: 236 KDGVKPNSVAFVAVLTACSH 255
++G +P+ +FV V +ACS+
Sbjct: 339 RNGFRPDDCSFVCVTSACSN 358
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 8/261 (3%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV ++LIN YAK + + + R+F +P D +S+N++IA G L+ F ++
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
++ + S ++ AC + L +QLH ++ G D + +++L Y++ G +
Sbjct: 134 ELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191
Query: 195 LARCIFDKMDL---HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +F +M D VSW A+I+ H +A+ LF +M + G+K + +VLT
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR-AGKLQEAYEFISNMHAGPT 310
A + + + M K G + + + DL + AG + E + + A P
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITA-PD 309
Query: 311 ENVWLTLLSACRVHKNVELAG 331
+W T++S +++++ G
Sbjct: 310 LVLWNTMISGFSLYEDLSEDG 330
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 127 LKFFRQMLIAKIKPRHV---------SFSSIMPACAHLT---TLHLGK--QLHGCIIRNG 172
L+ FR +L A I R + F S++P +L+ TL K LH
Sbjct: 9 LQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFH 68
Query: 173 FDD--NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
N+F ++L++ YAK I +AR +FD++ DIVS+ +I A G + L
Sbjct: 69 LTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRL 128
Query: 231 FEQMEKDGVKPNSVAFVAVLTACS-HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
FE++ + + + V+TAC GL+ + + + + YA+V + +
Sbjct: 129 FEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFV--------VVCGHDCYASVNNAV 180
Query: 290 ----GRAGKLQEAYEFISNM--HAGPTENVWLTLLSACRVHK 325
R G L EA M G E W ++ AC H+
Sbjct: 181 LACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/508 (42%), Positives = 319/508 (62%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WNT+I G A G A ++ R+M L +PD+ T ++ DV G+ IH
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR G + + + +SL+++YA C V ++++F +P KD ++WNS+I G +NG +E L
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ +M IKP + S++ ACA + L LGK++H +I+ G N+ ++ LLD+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVKPNSVAF 246
A+CG + A+ +FD+M + VSWT++I+G A++G +AI LF+ ME +G+ P + F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V +L ACSH G++ + + YF M ++Y I P EH+ + DLL RAG++++AYE+I +M
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W TLL AC VH + +LA +I ++PN+ G YV+LSN YA+ +RW D
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M G+KK P S +EV N+ + F+ GDKSHP I LKE+ R+ EGYVP
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
V DVEEE+K+N + YHSE++AI F +I TP+ + I ++KNLRVC DCH AIK +SK
Sbjct: 508 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 567
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ REI+VRD SRFHHF++G CSC DYW
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 9/257 (3%)
Query: 56 DVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCAR---VEDSHRLFCLL--PVKDAIS 109
+ K ++IH ++IRHG+ ++ +G LI + +H++F + P+ +
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NVFI 87
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
WN++I G + G +R+M ++ ++P ++ ++ A + + LG+ +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
IR+GF +++ +SLL +YA CG++ A +FDKM D+V+W +VI G A +G +A+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+L+ +M G+KP+ V++L+AC+ G + M K G+ + + DL
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDL 266
Query: 289 LGRAGKLQEAYEFISNM 305
R G+++EA M
Sbjct: 267 YARCGRVEEAKTLFDEM 283
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 134/246 (54%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV+WN+VI G A NG EEAL + +M + +KPD FT+ S+L A + G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y I+ GL N+ + L+++YA+C RVE++ LF + K+++SW S+I G N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E ++ F+ M + + P ++F I+ AC+H + G + + +R + I
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRI 360
Query: 180 A--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+ A+ G ++ A M + ++V W ++ +HG++ ++ F +++
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQI 418
Query: 237 DGVKPN 242
++PN
Sbjct: 419 LQLEPN 424
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/537 (42%), Positives = 327/537 (60%), Gaps = 31/537 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN+ + LA +A+ + ++ ++ PD+FT SSVL + +D+ G+ +HG
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN----------------- 111
+ G +N+ + + ++++YA C + ++ LF +P +D ++WN
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 112 --------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
S+IAG VQ G E + F +M A +K V+ +++ ACA L
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L LG ++H R+GF N+ I+++L+DMY KCG + A +F++M+ +VSW+A+I G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+HG A +A+ LF M + G++PN V F+ +L ACSH GLI + +F SMT+DYGI P
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY + DLL RAG L EA+EFI NM P VW LL ACRVHKNVE+A + + +
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
+DP N G YV+LSN YA A RW+D A +R FM+++ +KKTP S I V + FVAG
Sbjct: 456 LELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAG 515
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII 457
++SHP +I + +ELLE M +GYVP+T VL D+EE +K + HSE+LA+VFG++
Sbjct: 516 EESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM 575
Query: 458 CTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TP T IRI+KNLR+C DCH+A K IS IV REI+VRD +RFH F D CSC DYW
Sbjct: 576 NTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 2/229 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ SW ++I G + G +EA+++ +M +K + T+ +VL AD + G
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG 279
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH Y+ RHG NV I ++LI+MY KC +E++ ++F + + +SW+++I G +
Sbjct: 280 MRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMH 339
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E L+ F M I+P V+F ++ AC+H+ + G++ + R+ G +
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEH 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
++D+ ++ G + A M + + V W A++ +H N A
Sbjct: 400 YGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/518 (43%), Positives = 325/518 (62%), Gaps = 10/518 (1%)
Query: 5 DLVSWNTVIV--GLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
D VSWN +IV G R GL EA+ + R+M LK D FT++SVL F D++ G +
Sbjct: 207 DEVSWNAMIVACGQHREGL--EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQ 264
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQ-N 120
HG I+ G N +GS LI++Y+KCA + + ++F + D + WN++I+G Q
Sbjct: 265 FHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYE 324
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFI 179
L ++G+ FR+M P SF + AC++L++ +GKQ+H I++ N + +
Sbjct: 325 DLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSV 384
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY+KCGN+ AR +FD M H++VS ++I G A HG +++ LFE M + +
Sbjct: 385 NNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDI 444
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN++ F+AVL+AC H G +++ YFN M + + I P EHY+ + DLLGRAGKL+EA
Sbjct: 445 APNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAE 504
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M P W TLL ACR H NVELA K A + ++P N YV+LSN YA+A
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAA 564
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW++AA+++ MR +G+KK P CSWIE+ K + FVA D SHP I+ + E+L +M+
Sbjct: 565 RWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMK 624
Query: 420 QEGYVPDTKEVL---HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
Q GYVPD + L +VE ++K+ L YHSE+LA+ FG+I T + I ++KNLR+CGD
Sbjct: 625 QAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGD 684
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH AIK IS I REI VRD RFH F++G CSCGDYW
Sbjct: 685 CHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 142/260 (54%), Gaps = 7/260 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VS+NT+I A G AL + ++ + D FTLS V+ D V +++
Sbjct: 101 IPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVR- 159
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV---KDAISWNSIIAGC 117
++H + + G D + ++++ Y++ + ++ R+F + +D +SWN++I C
Sbjct: 160 -QLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVAC 218
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
Q+ E ++ FR+M+ +K + +S++ A + L G Q HG +I++GF N
Sbjct: 219 GQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNS 278
Query: 178 FIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQME 235
+ S L+D+Y+KC G + R +F+++ D+V W +I G + + + + D I F +M+
Sbjct: 279 HVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQ 338
Query: 236 KDGVKPNSVAFVAVLTACSH 255
+G P+ +FV V +ACS+
Sbjct: 339 HNGFHPDDCSFVCVTSACSN 358
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV ++LIN YAK + + + ++F +P D +S+N++IA G L+ F ++
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ + S ++ AC + L +QLH ++ G+D + +++L Y++ G +
Sbjct: 134 ELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191
Query: 195 LARCIFDKMDL---HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +F +M D VSW A+I+ H +A+ LF +M + G+K + +VLT
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR-AGKLQEAYEFISNMHAGPT 310
A + + + M K G + + + DL + AG + E + + A P
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEI-AAPD 309
Query: 311 ENVWLTLLSACRVHKNVELAG 331
+W T++S ++++ G
Sbjct: 310 LVLWNTMISGFSQYEDLSEDG 330
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 39/254 (15%)
Query: 123 FDEGLKFFRQMLIAKIKPRHV---------SFSSIMPACAHLT---TLHLGK--QLHGCI 168
F L+ FR +L A I R + F S++P +L+ TL K LH
Sbjct: 5 FPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNA- 63
Query: 169 IRNGFD----DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
+ FD N+F ++L++ YAK I LAR +FD++ DIVS+ +I A G
Sbjct: 64 -QTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGEC 122
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACS-HAGLIDKAWSYFNSMTKDYGIAPSFEHYA 283
A+ LF ++ + + V+ AC GL+ + + + ++ YA
Sbjct: 123 RPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFV--------VVCGYDCYA 174
Query: 284 AVADLL----GRAGKLQEAYEFISNM--HAGPTENVWLTLLSACRVHKN----VELAGKV 333
+V + + R G L EA M G E W ++ AC H+ VEL ++
Sbjct: 175 SVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREM 234
Query: 334 AEKIFMIDPNNMGA 347
+ +D M +
Sbjct: 235 VRRGLKVDMFTMAS 248
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 327/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SWNT+I GL G Y EA + M S +++ A + G
Sbjct: 192 MPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAG 251
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++ G+ +V + +LI+MY+KC +ED+ +F +P K + WNSIIAG +
Sbjct: 252 RQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALH 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + +M + +K + +FS I+ CA L +L KQ H ++R+GF ++
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y+K G I A+ +FD M +++SW A+I G HG +A+ +FE+M +G+
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+AVL+ACS++GL D+ W F SM++D+ I P HYA + +LLGR G L EA+
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + PT N+W LL+ACRVHKN EL AEK++ + P + YV+L N Y + R
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
++AA++ ++ +G++ PACSWIE+K + Y F++GDK H I + L EL+ + +
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISK 611
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP K +L DV+E++++ LL YHSE+LAI FG+I T D T ++I+++ R+CGDCH+A
Sbjct: 612 HGYVPQXKFLLPDVDEQEERVLL-YHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSA 670
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK I+ + +REI+VRD SRFHHF+DG CSCGDYW
Sbjct: 671 IKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 176/356 (49%), Gaps = 12/356 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKG 60
P S+L +V R Y EAL + + N DS T +++ +
Sbjct: 94 PSSELCGQIEKLVFFKR---YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGV 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++ Y I GLD + + + ++ M+ KC + D+ RLF +P K+ +SWN+II G V
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + E + F M F +++ A A L + G+QLH C ++ G ++F+A
Sbjct: 211 GDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVA 270
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+L+DMY+KCG+I A+C+FD+M V W ++I G ALHG + +A+S++ +M GVK
Sbjct: 271 CALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK 330
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
++ F ++ C+ ++ A + + +G A+ DL + G++++A
Sbjct: 331 IDNFTFSIIIRICARLASLEHAKQAHAGLVR-HGFGLDIVANTALVDLYSKWGRIEDAKH 389
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
M P +NV W L++ H A ++ E++ + PN++ +LS
Sbjct: 390 VFDMM---PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/508 (43%), Positives = 319/508 (62%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I AR+G E A+ + R+M +++PD+FT VL A +D+ G+E+H
Sbjct: 133 WNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRV 192
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+R A+V + + LI+MYAKC V+++ +F V+DA+ WNS+IA C QNG E L
Sbjct: 193 MRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEAL 252
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
R M I P V+ S + A A L G++LHG R GF + +SLLDMY
Sbjct: 253 ALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMY 312
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAF 246
AK G + +AR +FD++ +++SW A+I G +HG+A A LF +M + V P+ + F
Sbjct: 313 AKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITF 372
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+AC+H G++ +A F+ M Y I P +HY + D+LG +G+ +EA + I M
Sbjct: 373 VGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGML 432
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W LL+ C++HKNVELA K+ ++P + G YV+LSN YA + +W++AA
Sbjct: 433 VKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAAR 492
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M N+G+KK ACSWIE+K K++ F+ GD SHP I E L+ L + Q GYVPD
Sbjct: 493 VRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPD 552
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V H+VE+++K+N++ HSERLAI FG+I TP GT + + KNLRVC DCH IK IS+
Sbjct: 553 TTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQ 612
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I QREII+RD +R+HHF +G+CSC D+W
Sbjct: 613 IEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 106/194 (54%), Gaps = 2/194 (1%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
V G+++H + GL + + + L+++YA C V + RLF +P + + WN +I
Sbjct: 79 VRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIR 138
Query: 116 GCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
++G + ++ +R+ML ++P + ++ ++ ACA L L G+++H ++R +
Sbjct: 139 AYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWA 198
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ + L+DMYAKCG + A +FD + D V W ++I +G +A++L M
Sbjct: 199 ADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNM 258
Query: 235 EKDGVKPNSVAFVA 248
+G+ P V V+
Sbjct: 259 AAEGIAPTIVTLVS 272
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D V WN++I +NG EAL + R M + P TL S + AD + +G+E
Sbjct: 229 VRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRE 288
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HGY R G + + +SL++MYAK V + LF L ++ ISWN++I G +G
Sbjct: 289 LHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGH 348
Query: 123 FDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI-A 180
D + FR+M A++ P H++F ++ AC H + K++ ++ M
Sbjct: 349 ADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHY 408
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ L+D+ G + A + M + D W A++ G +H N
Sbjct: 409 TCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKN 452
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
H ++++I+ +C + G+QLH ++ +G + +A+ L+D+YA CG + +AR +FD
Sbjct: 63 HNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFD 122
Query: 202 KM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTAC------ 253
+M + ++ W +I A G AI L+ +M G ++P++ + VL AC
Sbjct: 123 EMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDL 182
Query: 254 -----------------------------SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
+ G +D+AW+ F+S T + + +
Sbjct: 183 GAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVV-----WNS 237
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
+ G+ G+ EA NM A +TL+S
Sbjct: 238 MIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVS 272
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 317/510 (62%), Gaps = 27/510 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN++I G NGL E+ L++ QM + + D T+ SV
Sbjct: 215 DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV----------------- 257
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ + + L++MY+K + + ++F + + +SW S+IAG + GL D
Sbjct: 258 ----------ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 307
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
++ F +M + P ++ + I+PACA L L G+++HG I+RNGF + +A++L+
Sbjct: 308 MSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALV 367
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG + LAR +FD + D+VSWT +I G +HG +AI+ F +M G++P+ V
Sbjct: 368 DMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEV 427
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+F+++L ACSH+GL+D+ W +FN M + I P EHYA + DLL RAG L +AY+FI
Sbjct: 428 SFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKM 487
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W LL CR++ +V+LA KVAE +F ++P N G YV+L+N YA A +W++
Sbjct: 488 MPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEV 547
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
LR + +G++K P CSWIE+K K + FV GD SHP ++I LK+ RM++EG+
Sbjct: 548 KKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHF 607
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P + L ++ +K+ L HSE++A+ FGI+ P G T+R+ KNLRVCGDCH KF+
Sbjct: 608 PKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFM 667
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+V+R+II+RD++RFHHF+DG CSC +W
Sbjct: 668 SKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 123/292 (42%), Gaps = 80/292 (27%)
Query: 24 EALNIVRQMGNVNLKP----DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
E N+ R M +N P + T SVL + AD + G+ IH + ++ + +G
Sbjct: 80 ELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG 139
Query: 80 SSLINMYAKCA------------------------------------------------- 90
S L+ MY C
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR 199
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
RVE + +LF L +D ISWNS+I+G V NGL ++GL F QML+ I + S+
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV-- 257
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
LT L+ C LLDMY+K GN+ A +F+ M +VS
Sbjct: 258 ---ELT-------LNNC---------------LLDMYSKSGNLNSAIQVFETMGERSVVS 292
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
WT++I G A G + ++ LF +MEK+ + PNS+ +L AC+ +++
Sbjct: 293 WTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERG 344
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 32/247 (12%)
Query: 84 NMYAKCARVEDSHRLFCLLPVK----DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
N+Y CA + S +LP + +N I + G ++ Q ++
Sbjct: 46 NLYHSCATIGTS-----VLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLE 100
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
R ++ S++ CA L ++ G+++H I N + + + S L+ MY CG++R R I
Sbjct: 101 LR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK--------------PNSVA 245
FDK+ + W ++ G A GN +++SLF++M + G++ + ++
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVIS 218
Query: 246 FVAVLTACSHAGLIDKAWSYFNSM-----TKDYGIAPSFEHYA--AVADLLGRAGKLQEA 298
+ ++++ GL +K F M D S E + D+ ++G L A
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSA 278
Query: 299 YEFISNM 305
+ M
Sbjct: 279 IQVFETM 285
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLVSW +I G +G EA+ +M N ++PD + S+L Y G
Sbjct: 386 IPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL-----YACSHSG 440
Query: 61 KEIHGYAIRHGLDANVCIG------SSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSI 113
G+ + + N CI + ++++ A+ + +++ ++P++ DA W ++
Sbjct: 441 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500
Query: 114 IAGC 117
+ GC
Sbjct: 501 LCGC 504
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/515 (43%), Positives = 325/515 (63%), Gaps = 10/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D+ SWNT+I LA+ GL EA + M N + S+++ + D+
Sbjct: 130 MPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKN----CVSWSAMVSGYVACGDLDAA 185
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
E + +R +V +++I Y K RVE + RLF + ++ ++WN++IAG V+
Sbjct: 186 VECFYAAPMR-----SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVE 240
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG ++GL+ FR ML +KP +S +S++ C++L+ L LGKQ+H + + +
Sbjct: 241 NGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTA 300
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MY+KCG+++ A +F ++ D+V W A+I G A HG A+ LF++M+K+G+
Sbjct: 301 GTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGL 360
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + FVAVL AC+HAGL+D YFN+M +D+GI EHYA + DLLGRAGKL EA
Sbjct: 361 KPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAV 420
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P ++ TLL ACR+HKN+ LA A+ + +DP YV L+N YAA
Sbjct: 421 DLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQN 480
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW AS+R M++ + K P SWIE+ + + F + D+ HP I+E LK+L ++M+
Sbjct: 481 RWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMK 540
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD + VLHDV EE K+ LL +HSE+LAI FG++ P G IR+ KNLRVCGDCH+
Sbjct: 541 LAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHS 600
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I REIIVRD +RFHHF+DG CSC DYW
Sbjct: 601 ATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 76/345 (22%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSS-LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
V K + + +H + N I S+ LI Y +C ++ + R+F + VK ++WNSI+A
Sbjct: 21 VTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILA 80
Query: 116 GCVQN-GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA-HLTTLHLGKQLHGCI----- 168
+ G F+ + RQ+ +P VS+ +IM AC H +H + +
Sbjct: 81 AFAKKPGHFE----YARQLFEKIPQPNTVSY-NIMLACHWHHLGVHDARGFFDSMPLKDV 135
Query: 169 ------------------IRNGF----DDNMFIASSLLDMYAKCGNI------------- 193
R F + N S+++ Y CG++
Sbjct: 136 ASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMR 195
Query: 194 ------------------RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
LA +F +M + +V+W A+I G +G A D + LF M
Sbjct: 196 SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML 255
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ GVKPN+++ +VL CS+ + + + ++ ++ + + G L
Sbjct: 256 ETGVKPNALSLTSVLLGCSNLSALQLG-KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDL 314
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
++A+E + P ++V W ++S H AGK A ++F
Sbjct: 315 KDAWELFIQI---PRKDVVCWNAMISGYAQHG----AGKKALRLF 352
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/516 (41%), Positives = 328/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +++SW ++I GL ++G EEAL + RQM V +KP S T V+ A+ +
Sbjct: 161 MPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALY 220
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G +IH + + G + I ++LI YA C ++EDS R+F + + W +++ G
Sbjct: 221 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG 280
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
N ++ LK F +M+ + P SF+S + +C L L G+++H ++ G + ++F
Sbjct: 281 LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVF 340
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+ MY +CGN+ IF ++ +IVSW +VI+G A HG A++ F QM +
Sbjct: 341 VGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSM 400
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+P+ + F +L+ACSH+G+ K F +++ +HYA + D+LGR+GKL+EA
Sbjct: 401 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 460
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I NM VWL LLSAC +H +E+A + A+ I ++P+ AYV+LSN YA+A
Sbjct: 461 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASA 520
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D + +R M+ +G+ K P SWI +K F++GD+SHP RI + L+ L ++
Sbjct: 521 SRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKL 580
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYVPD + LHDVE+EQK+ +L YHSERLAI FG+I T +G+TI ++KNLRVCGDCH
Sbjct: 581 KELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCH 640
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+AIK I+KIV+R+IIVRD++RFHHF DG+CSCGDYW
Sbjct: 641 SAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 143/265 (53%), Gaps = 16/265 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEA-LNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDV 57
MPV D+VSWN++I G ++ A L + R++ + + + ++++ F + ++V
Sbjct: 68 MPVKDVVSWNSMI-----KGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEV 122
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G + R ++ +S+I Y RVED RLF +P ++ ISW S+I G
Sbjct: 123 AEGL-FYKMPFR-----DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGL 176
Query: 118 VQNGLFDEGLKFFRQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
Q+G +E L FRQM+ ++KP ++ ++ ACA+ + L+ G Q+H + + G+
Sbjct: 177 DQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF 236
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ +I+++L+ YA C + + +F ++V WTA++ G L+ DA+ +F +M
Sbjct: 237 DAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMM 296
Query: 236 KDGVKPNSVAFVAVLTACSHAGLID 260
++GV PN +F + L +C +D
Sbjct: 297 REGVLPNQSSFTSALNSCCGLEALD 321
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+V + + +I YA+ R + + +LF +PVKD +SWNS+I GC K F +M
Sbjct: 41 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ VS+++++ + + + G + F D IA+ +Y C N R
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVAE---GLFYKMPFRD---IAAWNSMIYGYCCNGR 150
Query: 195 LARC--IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG--VKPNSVAFVAVL 250
+ +F +M +++SWT++I G HG + +A+ LF QM G VKP S + V+
Sbjct: 151 VEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVI 210
Query: 251 TACSHA 256
TAC++A
Sbjct: 211 TACANA 216
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 324/545 (59%), Gaps = 31/545 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW+ +I G +NG+YEEAL + +M ++ D + SVL A V G
Sbjct: 264 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 323
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA-------------------------------KC 89
K IHG IR G+++ V + ++LI+MY+ KC
Sbjct: 324 KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKC 383
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
VE + LF ++P KD +SW+++I+G Q+ F E L F +M + +I+P S++
Sbjct: 384 GSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVI 443
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC HL L GK +H I +NG N+ + ++LLDMY KCG + A +F+ M+ +
Sbjct: 444 SACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS 503
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW A+I+G A++G ++ +F +M+ +GV PN + F+ VL AC H GL+D+ +F SM
Sbjct: 504 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 563
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ +GI P+ +HY + DLLGRAG L EA + I +M P W LL AC+ H + E+
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 623
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
+V K+ + P++ G +V+LSN +A+ W+D +R M+ +G+ KTP CS IE
Sbjct: 624 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 683
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
+ F+AGDK+HP+ +++ L E+ +R++ EGY PDT EV D++EE+K+ L+ HSE+
Sbjct: 684 VVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEK 743
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FG++ T IRI+KNLR+C DCHTA K ISK REI+VRD RFH+F++G CS
Sbjct: 744 LAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACS 803
Query: 510 CGDYW 514
C DYW
Sbjct: 804 CMDYW 808
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 72/358 (20%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D VSWN+++ G + G EEA I QM
Sbjct: 203 PVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ--------------------------- 235
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
N+ +S+I + K +V ++ +LF + KD +SW+++I+G QNG
Sbjct: 236 ------------RNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNG 283
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+++E L F +M ++ V S++ ACAHL+ + GK +HG +IR G + + + +
Sbjct: 284 MYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQN 343
Query: 182 SLLDMYA-------------------------------KCGNIRLARCIFDKMDLHDIVS 210
+L+ MY+ KCG++ AR +FD M DIVS
Sbjct: 344 ALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVS 403
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W+AVI G A H + ++LF +M+ ++P+ V+V++AC+H +D+ + ++
Sbjct: 404 WSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAYI 462
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
+ G+ + + D+ + G ++ A E + M + W L+ V+ VE
Sbjct: 463 RKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSS-WNALIIGLAVNGLVE 519
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 159/322 (49%), Gaps = 41/322 (12%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT++ ++ E+AL + + M N+ PD++T V+ A + GKEIH + +
Sbjct: 109 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVL 168
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G D++V + ++LINMYA C + D+ +LF PV D++SWNSI+AG V+ G +E
Sbjct: 169 KVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKL 228
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QM P+ N+ ++S++ +
Sbjct: 229 IFDQM------PQR---------------------------------NIVASNSMIVLLG 249
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K G + A +F++MD D+VSW+A+I G +G +A+ +F +M +G++ + V V+
Sbjct: 250 KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVS 309
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL+AC+H ++ K + + GI A+ + +G++ +A + + H
Sbjct: 310 VLSACAHLSIV-KTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH-N 367
Query: 309 PTENVWLTLLSACRVHKNVELA 330
+ W +++S C +VE A
Sbjct: 368 LDQISWNSMISGCMKCGSVEKA 389
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 143/282 (50%), Gaps = 23/282 (8%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
S ++F + + WN+++ +Q+ ++ L ++ M+ + P + ++ ++ ACA
Sbjct: 94 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAV 153
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
GK++H +++ GFD ++++ ++L++MYA CGN+R AR +FD+ + D VSW ++
Sbjct: 154 RLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 213
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
+ G G+ +A +F+QM + N VA +++ G + +AW FN M +
Sbjct: 214 LAGYVKKGDVEEAKLIFDQMPQR----NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDM 269
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPT---ENVWLTLLSACRVHKNVELAG 331
++ ++A+ + G +EA M+A E V +++LSAC H ++ G
Sbjct: 270 VS-----WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC-AHLSIVKTG 323
Query: 332 KVAEKIFMIDPNNMG--AYVILSNT----YAAARRWKDAASL 367
K+ + + MG +YV L N Y+ + DA L
Sbjct: 324 KMIHGLVI----RMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYE-EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MPV +++SW +I G ++G + EA+ + +M +KP+ FT SSVL A+ D+
Sbjct: 209 MPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWL 268
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++++ ++ L + C+G+SLI+MY++C +E++ + F +L K+ +S+N+I+ +
Sbjct: 269 GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAK 328
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ +E + F ++ A +F+S++ + + + G+Q+H I+++GF N+ I
Sbjct: 329 SLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHI 388
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY++CGNI A +F++M +++SWT++I G A HG A A+ F +M + GV
Sbjct: 389 CNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGV 448
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V ++AVL+ACSH GLI + +F SM ++GI P EHYA V DLLGR+G L+EA
Sbjct: 449 SPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAM 508
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E +++M V T L ACRVH N++L AE I DP++ AY++LSN +A+A
Sbjct: 509 ELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAG 568
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ A +R M+ + + K CSWIEV+NK + F GD SHP I + L +L +++
Sbjct: 569 QWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIK 628
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+P T VLHDVEEEQK+ L+ HSE++A+ +G I T IR+ KNLRVCGDCHT
Sbjct: 629 ELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHT 688
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+ S + ++EI++RD +RFHHF+DG CSC DYW
Sbjct: 689 AFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 191/358 (53%), Gaps = 8/358 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W +I + G +A+++ M PD FTLS V+ A+ + G
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKC---ARVEDSHRLFCLLPVKDAISWNSIIAGC 117
++ H ++ GLD +VC+G SL++MYAKC V+D+ ++F +PV + +SW +II G
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGY 224
Query: 118 VQNGLFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
VQ+G D E ++ F +M+ ++KP H +FSS++ ACA+L+ + LG+Q++ +++
Sbjct: 225 VQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASI 284
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +SL+ MY++CGN+ AR FD + ++VS+ ++ A N+ +A LF ++E
Sbjct: 285 NCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEG 344
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G N+ F ++L+ S G I K + + K G + A+ + R G ++
Sbjct: 345 AGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIE 403
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
A++ + M G + W ++++ H A + K+ + PN + +LS
Sbjct: 404 AAFQVFNEMGDGNVIS-WTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 147/257 (57%), Gaps = 6/257 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSW+ +I A N EA++ M P+ + + V ++ ++ GK I
Sbjct: 6 DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ ++ G +++VC+G +LI+M+ K +E ++++F +P ++ ++W +I Q G
Sbjct: 66 GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + F M+++ P + S ++ ACA + L LG+Q H ++++G D ++ + S
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-HDAISLFEQMEKDG 238
L+DMYAKC G++ AR +FD+M +H+++SWTA+I G G +AI LF +M +
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQ 245
Query: 239 VKPNSVAFVAVLTACSH 255
VKPN F +VL AC++
Sbjct: 246 VKPNHFTFSSVLKACAN 262
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+D +SW+++I+ N E + F ML P F+ + AC++ + LGK +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 165 HGCIIRNG-FDDNMFIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
G +++ G F+ ++ + +L+DM+ K G++ A +FD+M ++V+WT +I G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+ DA+ LF M G P+ V++AC+ GL+
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLL 161
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/539 (40%), Positives = 325/539 (60%), Gaps = 35/539 (6%)
Query: 11 TVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRH 70
T +VG Y + +I + N D FT VL + + V GK +HG +R
Sbjct: 104 TALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSVELLSVWMGKCVHGLILRI 163
Query: 71 GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG-----CV------- 118
GL ++ + +SLI +Y KC + D+ ++F + ++D SWN+++AG C+
Sbjct: 164 GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIF 223
Query: 119 -------------------QNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTT 157
Q+GL + L F +M+ + ++P V+ S++PACA L+T
Sbjct: 224 ERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST 283
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVI 215
L G+Q+H R G + N + +L MYAKCG++ AR FDK++ ++ +++W +I
Sbjct: 284 LERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMI 343
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
A +G+ A+S F +M + G++P+ + F +L+ CSH+GL+D YFN M+ Y I
Sbjct: 344 TAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSI 403
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
P EHYA VADLLGRAG+L EA + + M ++W +LL+ACR H+N+E+A A
Sbjct: 404 NPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAAR 463
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
K+F+++P N G YV+LSN YA A RW++ LR ++++G KK+P CSWIE+ KA+ F+
Sbjct: 464 KLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFL 523
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFG 455
GD SHP I L+ L E+M+ GY PDT VLHD+ EE+K+ L HSE+LA+ FG
Sbjct: 524 GGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFG 583
Query: 456 IICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I+ TP T +R+ KNLR+CGDCHTA+ FIS+I RE+IVRD +RFHHF+ G CSCGDYW
Sbjct: 584 ILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP ++VSW T+I G +++GL ++AL++ +M + ++P+ T+ SVLP A +
Sbjct: 226 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 285
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL--PVKDAISWNSIIAG 116
+G++IH A R GL++N + +L MYAKC + D+ F L K+ I+WN++I
Sbjct: 286 RGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 345
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
G + + FR+M+ A I+P ++F+ ++ C+H + +G
Sbjct: 346 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 390
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 45/245 (18%)
Query: 39 PDSFTLSSVLPIFA--DYVDVIK-GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
P + S P+F ++++K G ++H + + GL +GS ++ YA ++ S
Sbjct: 65 PGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSS 124
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F NG+ D + +F ++ + L
Sbjct: 125 VSVF--------------------NGIGD-----------------YFTFPFVLKSSVEL 147
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
++ +GK +HG I+R G ++++A+SL+ +Y KCG I A +FD M + D+ SW A++
Sbjct: 148 LSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALL 207
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYG 274
G G A+++FE+M N V++ +++ S +GL +A S F+ M K D G
Sbjct: 208 AGYTKSGCIDAALAIFERMPWR----NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 263
Query: 275 IAPSF 279
+ P++
Sbjct: 264 VRPNW 268
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP--IFADYVDVIKGKE 62
+L++WNT+I A G +A++ R+M ++PD T + +L + VDV
Sbjct: 335 NLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYF 394
Query: 63 IH---GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGC 117
H Y+I ++ C+ ++ + R+ ++ +L +P+ S W S++A C
Sbjct: 395 NHMSTTYSINPRVEHYACVA----DLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAAC 449
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 103/278 (37%), Gaps = 50/278 (17%)
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ Q L A P +S++ + L L LG Q+H ++ G + S ++
Sbjct: 55 LQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114
Query: 187 YAKCGNIRLARCIFDKMD--------LHDIVSWTAVIMGNALH----------------- 221
YA G+I + +F+ + L V +V MG +H
Sbjct: 115 YASSGDIDSSVSVFNGIGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATS 174
Query: 222 --------GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
G +DA +F+ M V ++ A+L + +G ID A + F M
Sbjct: 175 LIILYGKCGEINDAGKVFDNMTIRDVS----SWNALLAGYTKSGCIDAALAIFERMPWRN 230
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNM---HAGPTENVWLTLLS---ACRVHKNV 327
++ + + ++G Q+A M +G N W+T++S AC +
Sbjct: 231 IVS-----WTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPN-WVTIMSVLPACAQLSTL 284
Query: 328 ELAGKVAEKIFMIDPN-NMGAYVILSNTYAAARRWKDA 364
E ++ E + N N + L+ YA DA
Sbjct: 285 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDA 322
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 316/510 (61%), Gaps = 34/510 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN+++ G A N +++AL I R+M + KPD T++S++P A+
Sbjct: 184 DVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVAN----------- 232
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
SS +Y + ++F L K+ ISWN +I ++N L
Sbjct: 233 --------------TSSENVLYVE--------KIFVNLERKNLISWNVMIRVYMKNSLPT 270
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + + QM +++P ++F+S++PAC L+ L LG+++H + + N+ + +SL+
Sbjct: 271 QAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLI 330
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYA+CG + A+ +FD+M D+ SWT++I + G +A++LF +M G P+S+
Sbjct: 331 DMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSI 390
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
AFVA+L+ACSH+GL+D+ YF MT DY I P EHYA + DLLGRAG++ EAY I
Sbjct: 391 AFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQ 450
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P E VW TLLS+CRV N+++ A+ + + P G YV+LSN YA A RWK+
Sbjct: 451 MPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEV 510
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M+ K ++KTP S +E+ N+ + F+AGD SHP I E L L+ +M++ GYV
Sbjct: 511 TEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYV 570
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T LHDVEEE K+ L HSE+LAIVF ++ T + IRI KNLRVCGDCH A K I
Sbjct: 571 PETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLI 629
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV+REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 630 SKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 45/325 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++V +N +I N Y++ L + R+M N +PD++T VL + ++ G
Sbjct: 79 MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG ++ GLD N+ +G+ LI MY KC + ++ R+F + KD +SWNS++AG N
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
FD+ L+ R+M KP + +S+MPA A+ ++
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS----------------------- 235
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI---MGNALHGNAHDAISLFEQMEKD 237
N+ IF ++ +++SW +I M N+L A+ L+ QMEK
Sbjct: 236 ----------ENVLYVEKIFVNLERKNLISWNVMIRVYMKNSL---PTQAVDLYLQMEKC 282
Query: 238 GVKPNSVAFVAVLTACS--HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
V+P+++ F +VL AC A L+ + + K + P+ ++ D+ R G L
Sbjct: 283 RVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKK---LCPNLLLENSLIDMYARCGCL 339
Query: 296 QEAYEFISNMHAGPTENVWLTLLSA 320
+A M + W +L+SA
Sbjct: 340 DDAKRVFDRMKFRDVAS-WTSLISA 363
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D+ K++H N +G L+ YA C + ++F + ++ + +N +I
Sbjct: 33 DIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIR 92
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
V N +D+GL FR+M+ +P + ++ ++ AC+ L G +HG +++ G D
Sbjct: 93 SYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDF 152
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F+ + L+ MY KCG + AR +FD+M D+VSW +++ G A + DA+ + +ME
Sbjct: 153 NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREME 212
Query: 236 KDGVKPNSVAFVAVLTACSHA 256
G KP+ +++ A ++
Sbjct: 213 DYGQKPDGCTMASLMPAVANT 233
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/578 (39%), Positives = 327/578 (56%), Gaps = 65/578 (11%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKG 60
P D NT+I L+ + +L+ Q+ L PDSFT + L A+ + G
Sbjct: 63 PNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPG 122
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA-------------------------------KC 89
++H A RHG DA++ +G++LI+MYA +C
Sbjct: 123 IQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRC 182
Query: 90 ARVEDSHRLFCLLPVK-------------------------------DAISWNSIIAGCV 118
VE + +F +PV+ D +SW+++I G
Sbjct: 183 GDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFA 242
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG FDE FFR++L +I+ VS + ++ ACA GK LHG + + GF
Sbjct: 243 HNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGS 302
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+D Y+KCGN+ +AR +F M + IVSWT++I G A+HG +AI LF +ME+
Sbjct: 303 VNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEES 362
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV+P+ + F+++L ACSH+GL+++ F+ M YGI P+ EHY + DL GRA +LQ+
Sbjct: 363 GVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQK 422
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI M P +W TLL AC +H N+E+A V ++ +DP+N G +V+LSN YA
Sbjct: 423 AYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAV 482
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A +WKD +S+R M MKKTP S IE+ Y FVAG+K + +E L+E++ R
Sbjct: 483 AGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLR 542
Query: 418 MEQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ E GY P + VLHD+EEE+K++ + HSE+LA FGI P G +RI+KNLRVCGD
Sbjct: 543 LRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGD 602
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHT +K ISK+ Q EIIVRD SRFH F+DG CSC DYW
Sbjct: 603 CHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 120/227 (52%), Gaps = 5/227 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D VSW+T+IVG A NG ++EA R++ ++ + +L+ VL A G
Sbjct: 226 MPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFG 285
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
K +HG+ + G + ++LI+ Y+KC V + +F +PV + +SW SIIAG
Sbjct: 286 KILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAM 345
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNM 177
+G +E ++ F +M + ++P ++F S++ AC+H + G L ++N G + +
Sbjct: 346 HGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFS-KMKNLYGIEPAI 404
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+Y + ++ A +M + + + W ++ ++HGN
Sbjct: 405 EHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGN 451
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 162/389 (41%), Gaps = 63/389 (16%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-RVEDSH----RLFCLLPVKDAISWNSIIA 115
K+IH + GL + + L+ CA + D+ RLF P D N++I
Sbjct: 19 KQIHAQICKTGLHTDPLVFGKLL---LHCAITISDALHYALRLFHHFPNPDTFMHNTLIR 75
Query: 116 GCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+ L F Q+ + P +F+ + A A+ L G QLH R+GFD
Sbjct: 76 SLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFD 135
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+ MYA+CG+ AR +FD+M ++V+W AV+ G+ A +F
Sbjct: 136 AHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVF--- 192
Query: 235 EKDGVKP--NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
G P N ++ +L + AG + A F M P + + ++G A
Sbjct: 193 ---GCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEM-------PLRDEVSWSTMIVGFA 242
Query: 293 --GKLQEAYEFISNM--HAGPTENVWLT-LLSACR----------VHKNVELAGKVAEKI 337
G EA+ F + T V LT +LSAC +H VE AG +
Sbjct: 243 HNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG----FL 298
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
++ NN L +TY+ + + A R+ +N + ++ SW + +AG
Sbjct: 299 YVGSVNNA-----LIDTYS---KCGNVAMARLVFQNMPVARS-IVSWTSI-------IAG 342
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPD 426
H E +L ME+ G PD
Sbjct: 343 LA----MHGCGEEAIQLFHEMEESGVRPD 367
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/516 (42%), Positives = 315/516 (61%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +L++W+ +I A +G EAL R M + P+ T S+L F + +
Sbjct: 172 MKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 231
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKC--ARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
IH HGLD + ++L+N+Y +C ++ + + + + +WN +I G
Sbjct: 232 SRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYT 291
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+G E L+ ++++ + I V+F S++ AC T+L GK +H + G D ++
Sbjct: 292 LHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVI 351
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L +MY+KCG++ AR IFD M + VSW ++ A HG + + + L +ME++G
Sbjct: 352 VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG 411
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VK N + FV+VL++CSHAGLI + YF+S+ D GI EHY + DLLGRAGKLQEA
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEA 471
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
++IS M + P W +LL ACRVHK+++ A K+ +DP N A V+LSN Y+
Sbjct: 472 EKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSER 531
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
WK+AA LR M ++ +KK P S I+VKNK + F D SHP I + ++EL M
Sbjct: 532 GDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAM 591
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPDTK VLHDV+EEQK++LL YHSE+LAI FG+I TP+ +++ I KNLRVC DCH
Sbjct: 592 REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCH 651
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFISKI REI+VRDN RFHHF DG CSC DYW
Sbjct: 652 TATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 167/341 (48%), Gaps = 8/341 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +WN++I + + EA I ++M + + D T S+L + ++ G
Sbjct: 71 MPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + + ++ +G++LI MYA+C E++ ++F + K+ I+W++II +
Sbjct: 131 KHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADH 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L++FR M I P V+F S++ + L ++H I +G DD ++
Sbjct: 191 GHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMS 250
Query: 181 SSLLDMYAKC--GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L+++Y +C G + +A I +MD I +W +I G LHG + +A+ +++++ +
Sbjct: 251 NALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEA 310
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ + V F++VL AC+ + + + +S + G+ A+ ++ + G ++ A
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 369
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
+M P + W +L A H E K+ K+
Sbjct: 370 RRIFDSM---PIRSAVSWNGMLQAYAQHGESEEVLKLIRKM 407
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 145/291 (49%), Gaps = 6/291 (2%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
+K + T +VL D + KGK IH +V + ++L+N Y KC + D+
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
++F +P + +WNS+I+ + E F++M + V+F SI+ AC +
Sbjct: 66 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L GK + I F+ ++F+ ++L+ MYA+C + A +F +M ++++W+A+I
Sbjct: 126 NLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIIT 185
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA-CSHAGLIDKAWSYFNSMTKDYGI 275
A HG+ +A+ F M+++G+ PN V F+++L + +GL + S + + ++G+
Sbjct: 186 AFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL--EELSRIHLLITEHGL 243
Query: 276 APSFEHYAAVADLLGR--AGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+ A+ ++ GR G+L A + M W L++ +H
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQI-TAWNVLINGYTLH 293
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 70/121 (57%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML+ +K ++F +++ + L GK +H C+ + ++F+ ++L++ Y KCG+
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR +FD M + +W ++I ++ + +A +F++M+ +G + + V F+++L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 253 C 253
C
Sbjct: 121 C 121
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/516 (41%), Positives = 328/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +++SW ++I GL ++G EEAL + RQM V +KP S T V+ A+ +
Sbjct: 145 MPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALY 204
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G +IH + + G + I ++LI YA C ++EDS R+F + + W +++ G
Sbjct: 205 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG 264
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
N ++ LK F +M+ + P SF+S + +C L L G+++H ++ G + ++F
Sbjct: 265 LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVF 324
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+ MY +CGN+ IF ++ +IVSW +VI+G A HG A++ F QM +
Sbjct: 325 VGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSM 384
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+P+ + F +L+ACSH+G+ K F +++ +HYA + D+LGR+GKL+EA
Sbjct: 385 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 444
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I NM VWL LLSAC +H +E+A + A+ I ++P+ AYV+LSN YA+A
Sbjct: 445 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASA 504
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D + +R M+ +G+ K P SWI +K F++GD+SHP RI + L+ L ++
Sbjct: 505 SRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKL 564
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYVPD + LHDVE+EQK+ +L YHSERLAI FG+I T +G+TI ++KNLRVCGDCH
Sbjct: 565 KELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCH 624
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+AIK I+KIV+R+IIVRD++RFHHF DG+CSCGDYW
Sbjct: 625 SAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 143/265 (53%), Gaps = 16/265 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEA-LNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDV 57
MPV D+VSWN++I G ++ A L + R++ + + + ++++ F + ++V
Sbjct: 52 MPVKDVVSWNSMI-----KGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEV 106
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G + R ++ +S+I Y RVED RLF +P ++ ISW S+I G
Sbjct: 107 AEGL-FYKMPFR-----DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGL 160
Query: 118 VQNGLFDEGLKFFRQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
Q+G +E L FRQM+ ++KP ++ ++ ACA+ + L+ G Q+H + + G+
Sbjct: 161 DQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF 220
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ +I+++L+ YA C + + +F ++V WTA++ G L+ DA+ +F +M
Sbjct: 221 DAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMM 280
Query: 236 KDGVKPNSVAFVAVLTACSHAGLID 260
++GV PN +F + L +C +D
Sbjct: 281 REGVLPNQSSFTSALNSCCGLEALD 305
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+V + + +I YA+ R + + +LF +PVKD +SWNS+I GC K F +M
Sbjct: 25 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ VS+++++ + + + G + F D IA+ +Y C N R
Sbjct: 85 ERSV----VSWTTMINGFLQFGKIEVAE---GLFYKMPFRD---IAAWNSMIYGYCCNGR 134
Query: 195 LARC--IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG--VKPNSVAFVAVL 250
+ +F +M +++SWT++I G HG + +A+ LF QM G VKP S + V+
Sbjct: 135 VEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVI 194
Query: 251 TACSHA 256
TAC++A
Sbjct: 195 TACANA 200
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/513 (40%), Positives = 327/513 (63%), Gaps = 1/513 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SW ++I G A+N + +EAL ++ M KP+ FT +S+L G
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG 184
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH +++ +V +GS+L++MYA+C R++ + +F L K+ +SWN++IAG +
Sbjct: 185 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +M + H ++SS+ A A + L GK +H +I++G + F+
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++LDMYAK G++ AR +FD++D D+V+W +++ A +G +A++ FE+M K GV
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F+++LTACSH GL+ + YF+ M K+Y + P +HY V DLLGRAG L +A
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALV 423
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL +CR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 424 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 483
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA +R M+ G+KK PACSW+E++N + FVA D +HP I + +E+ ++ +
Sbjct: 484 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 543
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL V+E++++ L YHSE++A+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 544 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 603
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
++ISK+ +REI+VRD +RFHHF G CSCGDY
Sbjct: 604 FRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 123/217 (56%)
Query: 46 SVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK 105
S++ A Y + + IH + +V + +SLI++Y KC V D+ R+F +P +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
D SW S+IAG QN + DE L ML + KP +F+S++ A + +G+Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
++ + D++++ S+LLDMYA+CG + +A +FD+++ + VSW A+I G A G+
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ +F +M+++G + + +V +A + G +++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 285
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ S++ ACA +L + +H + + F ++F+ +SL+ +Y KCG + AR +FD M
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+ SWT++I G A + +A+ L M + KPN F ++L A A
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG-ASASSGIGE 185
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+++T Y +A+ D+ R G++ A
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/523 (41%), Positives = 330/523 (63%), Gaps = 9/523 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM------GNVNLKPDSFTLSSVLPIFADY 54
+P ++VSW ++I G NG +A+++ + + + + DS L SV+ +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNS 112
+ IH + I+ G D V +G++L++ YAK V + ++F + KD +S+NS
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRH-VSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
I++ Q+G+ +E + FR+++ K+ + ++ S+++ A +H L +GK +H +IR
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +D++ + +S++DMY KCG + AR FD+M ++ SWTA+I G +HG+A A+ LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M GV+PN + FV+VL ACSHAGL + W +FN+M +G+ P EHY + DLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG LQ+AY+ I M P +W +LL+ACR+HKNVELA ++F +D +N G Y++L
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
S+ YA A RWKD +R+ M+N+G+ K P S +E+ + + F+ GD+ HP +I E L
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
EL ++ + GYV +T V HDV+EE+K+ L HSE+LAI FGI+ T G+T+ ++KNL
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVC DCH IK ISKIV RE +VRD RFHHF+DG CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 17/365 (4%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+ SWN+VI LAR+G EAL M ++L P + + + D+ GK+
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G +++ + S+LI MY+ C ++ED+ ++F +P ++ +SW S+I G NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 124 DEGLKFFRQMLIAKIKPRHVSF------SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ + F+ +L+ + F S++ AC+ + L + +H +I+ GFD +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 178 FIASSLLDMYAKCGN--IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++LLD YAK G + +AR IFD++ D VS+ +++ A G +++A +F ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 236 KDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ V N++ VL A SH+G + + + + G+ ++ D+ + G+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGR 337
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
++ A + M + W +++ +H + A K E +F MID Y+
Sbjct: 338 VETARKAFDRMKNKNVRS-WTAMIAGYGMHGH---AAKALE-LFPAMIDSGVRPNYITFV 392
Query: 353 NTYAA 357
+ AA
Sbjct: 393 SVLAA 397
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 327/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW +I G A+N + EA+ ++ M +P+ FT +S+L G
Sbjct: 121 MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIG 180
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A+++ D +V +GS+L++MYA+C +++ + +F L K+ +SWN++IAG +
Sbjct: 181 EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARK 240
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L F +M H ++SS+ A A + L G+ +H +I++G F+
Sbjct: 241 ADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVG 300
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++L MYAK G++ AR +FD+MD D+V+W ++ A +G +A++ FE++ K G++
Sbjct: 301 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ 360
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F++VLTACSH GL+ + YF+ M KDY + P +HY + DLLGRAG L+EA
Sbjct: 361 LNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLLGRAGLLKEALI 419
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M PT VW LL ACR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 420 FVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGK 479
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW++++N + FVA D +HP I +E+ R+++
Sbjct: 480 WNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKK 539
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL + E++++ L YHSE++A+ F +I P G +IRI+KN+R+CGDCH+A
Sbjct: 540 AGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSA 599
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K++SK+ +REI+VRD +RFHHF +G CSCGDYW
Sbjct: 600 FKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 121/227 (53%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
L P S++ A + ++ + IH + R L + + +SLI+MY KC V D+
Sbjct: 55 ELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDA 114
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
+F +P +D +SW +IAG QN + E + ML A+ +P +F+S++ A
Sbjct: 115 RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 174
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+G+Q+H ++ +D+++++ S+LLDMYA+C + +A +FD++ + VSW A+I
Sbjct: 175 GGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALI 234
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G A + + F +M+++G + ++ +A + G +++
Sbjct: 235 AGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 281
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
GL+ + ++ P + SI+ ACA L + +H + R+ + F+ +SL+
Sbjct: 44 GLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIH 103
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG + AR +FDKM D+VSWT +I G A + +AI L M + +PN
Sbjct: 104 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 163
Query: 246 FVAVLTACSHAG 257
F ++L A G
Sbjct: 164 FTSLLKATGACG 175
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/514 (42%), Positives = 324/514 (63%), Gaps = 8/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWNT+I G A+NG ++A ++ M N + S+++ + ++ D+
Sbjct: 162 MPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYVEHGDLEAA 217
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E++ G+ + V + ++++ Y K +VE + R+F + VK+ ++WNS+IAG V+N
Sbjct: 218 EELYKNV---GMKS-VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++GLK F+ M+ ++++P +S SS++ C++L+ L LG+Q+H + ++ +
Sbjct: 274 CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTAC 333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KCG++ A +F +M D++SW A+I G A HG A+ LF++M +K
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FVAV+ AC+HAG +D YF SM K++GI HY V DLLGRAG+L EA
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P ++ TLL ACR+HKN++LA A + +DP + YV L+N YAA +
Sbjct: 454 LIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNK 513
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M+ + K P SWIE+K+ + F + D+ HP I++ L EL +M+
Sbjct: 514 WDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKL 573
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD + LHDVEEE K+ LL +HSE+LAI FG++ T GT IR+ KNLRVCGDCH A
Sbjct: 574 AGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRA 633
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFIS I +REIIVRD +RFHHF +G CSCGDYW
Sbjct: 634 IKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 33/341 (9%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI-KGKE 62
SD+VS N I R E A N+ +M + T +++L + Y V K KE
Sbjct: 71 SDVVSLNKTIASFVRACDLESARNVFEKMSVRT----TVTWNTML---SGYTKVAGKVKE 123
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H + +V L+ Y + VE + F +PVKD SWN++I+G QNG
Sbjct: 124 AHELFDKIPEPDSVSYNIMLV-CYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQ 182
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ F M + VS+S+++ L ++L+ +N ++ + ++
Sbjct: 183 MQKAFDLFSVM----PEKNGVSWSAMISGYVEHGDLEAAEELY----KNVGMKSVVVETA 234
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+L Y K G + LA IF +M + ++V+W ++I G + A D + +F+ M + V+PN
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPN 294
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAY 299
++ +VL CS+ + ++K +P + A L+ + G L A+
Sbjct: 295 PLSLSSVLLGCSNLSALPLGRQMHQLVSK----SPLSKDTTACTSLISMYCKCGDLDSAW 350
Query: 300 EFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
+ M P ++V W ++S H AG+ A +F
Sbjct: 351 KLFLEM---PRKDVISWNAMISGYAQHG----AGRKALHLF 384
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 145 FSSIMPACAHLTTLHLG---------------KQLHGCIIRNGFDDNMFI--ASSLLDM- 186
F +P AH LHLG +++H + N N+ + AS ++ +
Sbjct: 19 FRHFLPIEAHFRNLHLGSNEESSSIASSIHPPRRIH-LVSPNNVTPNLHVDTASDVVSLN 77
Query: 187 -----YAKCGNIRLARCIFDKMDLHDIVSWTAVIMG-NALHGNAHDAISLFEQMEKDGVK 240
+ + ++ AR +F+KM + V+W ++ G + G +A LF+++ +
Sbjct: 78 KTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP----E 133
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSM-TKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+SV++ +L + ++ A ++FN M KD + + + G++Q+A+
Sbjct: 134 PDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIA------SWNTLISGFAQNGQMQKAF 187
Query: 300 EFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFM 339
+ S M P +N W ++S H ++E A ++ + + M
Sbjct: 188 DLFSVM---PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGM 226
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 327/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW +I G A+N + EA+ ++ M +P+ FT +S+L G
Sbjct: 18 MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIG 77
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A+++ D +V +GS+L++MYA+C +++ + +F L K+ +SWN++IAG +
Sbjct: 78 EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARK 137
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L F +M H ++SS+ A A + L G+ +H +I++G F+
Sbjct: 138 ADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVG 197
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++L MYAK G++ AR +FD+MD D+V+W ++ A +G +A++ FE++ K G++
Sbjct: 198 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ 257
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F++VLTACSH GL+ + YF+ M KDY + P +HY + DLLGRAG L+EA
Sbjct: 258 LNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLLGRAGLLKEALI 316
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M PT VW LL ACR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 317 FVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGK 376
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW++++N + FVA D +HP I +E+ R+++
Sbjct: 377 WNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKK 436
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL + E++++ L YHSE++A+ F +I P G +IRI+KN+R+CGDCH+A
Sbjct: 437 AGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSA 496
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K++SK+ +REI+VRD +RFHHF +G CSCGDYW
Sbjct: 497 FKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 99/178 (55%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY KC V D+ +F +P +D +SW +IAG QN + E + ML A+ +P +
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F+S++ A +G+Q+H ++ +D+++++ S+LLDMYA+C + +A +FD++
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ VSW A+I G A + + F +M+++G + ++ +A + G +++
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/370 (54%), Positives = 267/370 (72%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ I+ ACA + L GKQ+H II+ GF+ ++ +++ L+DMY KCG I A+ +F K+
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+ SW A+I G A HG +A+ LFEQM + GVKPN + FV VL+ CSHAGL+D+ +
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
YF+SMT+D+GI+P EHY+ + DL GRAG L EA FI+ M P +VW +LL ACRVH
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
N+ELA + E++ + P N G YV+LSN YAAA RW DA +R M+++ +KK P CSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
IEV+NK + F+ GD SHP I E L+ L +M+ GY+P+T VLHDVEEEQK+ +L
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
+HSE+LAI FGII TP GTTIR++KNLRVCGDCHTA KFIS+IV REI++RD RFHHF+
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360
Query: 505 DGKCSCGDYW 514
DG+CSCGDYW
Sbjct: 361 DGQCSCGDYW 370
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
++ +L A + +GK++H I+ G + +V + + L++MY KC R+ED+ +F L
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ 163
D SWN++I+G Q+G E + F QML +KP ++F ++ C+H + G+
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 164 LHGCIIRN-GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALH 221
+ R+ G S ++D++ + G + A ++M + S W +++ +H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 222 GNAHDAISLFEQM 234
GN A EQ+
Sbjct: 181 GNIELAERAVEQL 193
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ SWN +I GLA++G +EA+ + QM +KP+ T VL + V +G+
Sbjct: 63 DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122
Query: 65 GYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQNGL 122
R HG+ S +++++ + ++++ +PV+ +A W S++ C +G
Sbjct: 123 DSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGN 182
Query: 123 FDEGLKFFRQML 134
+ + Q++
Sbjct: 183 IELAERAVEQLI 194
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/512 (41%), Positives = 318/512 (62%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA----DYVDVIKGKEIH 64
WN + LA G +E L++ QM + D FT + VL + KGKEIH
Sbjct: 147 WNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIH 206
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +RHG +AN+ + ++L+++YAK V ++ +FC +P K+ +SW+++IA +N +
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266
Query: 125 EGLKFFRQMLIAKIK--PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L+ F+ M+ P V+ +++ ACA L L GK +HG I+R D + + ++
Sbjct: 267 KALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNA 326
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MY +CG + + + +FD M D+VSW ++I +HG AI +FE M GV P+
Sbjct: 327 LITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPS 386
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
++F+ VL ACSHAGL+++ F SM Y I P EHYA + DLLGRA +L EA + I
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLI 446
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
+MH P VW +LL +CR+H NVELA + + +F ++P N G YV+L++ YA A+ W
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWS 506
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+A S+ + +G++K P CSWIEVK K Y+FV+ D+ +P I+ L +L M+ +G
Sbjct: 507 EAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQG 566
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVP T VL+D++EE+K+ ++ HSE+LA+ FG+I T G TIRI KNLR+C DCH K
Sbjct: 567 YVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTK 626
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK REI+VRD +RFHHF DG CSCGDYW
Sbjct: 627 FISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP + VSW+ +I A+N + +AL + + M N P+S T+ ++L A +
Sbjct: 244 MPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALE 303
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IHGY +R LD+ + + ++LI MY +C V R+F + +D +SWNS+I+
Sbjct: 304 QGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYG 363
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+G + ++ F M+ + P ++SF +++ AC+H + GK L
Sbjct: 364 MHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKIL 409
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 20/337 (5%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N +I L + G ++AL+++ N P T ++ A + G ++H +
Sbjct: 51 NQLIQSLCKGGNLKQALHLLCCEPN----PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVD 106
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G D + + + LINMY + ++ + ++F + WN++ G E L
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDL 166
Query: 130 FRQMLIAKIKPRHVSFSSIMPACA----HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ QM +++ ++ AC + L GK++H I+R+G++ N+ + ++LLD
Sbjct: 167 YIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLD 226
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNS 243
+YAK G++ A +F M + VSW+A+I A + A+ LF+ M E PNS
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNS 286
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDY--GIAPSFEHYAAVADLLGRAGKLQEAYEF 301
V V +L AC+ +++ + + I P A+ + GR G++
Sbjct: 287 VTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLN---ALITMYGRCGEVLMGQRV 343
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
NM + W +L+S +H GK A +IF
Sbjct: 344 FDNMKKRDVVS-WNSLISIYGMHG----FGKKAIQIF 375
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/541 (41%), Positives = 326/541 (60%), Gaps = 36/541 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DL SWN ++ G RN + A + +M + D + +++L +A V +
Sbjct: 21 MPERDLFSWNVMLTGYVRNRDLKTARALFERMP----ERDIVSWNAMLSGYAQNGFVDEA 76
Query: 61 KEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------CLL----- 102
+EI + +++G+ N L+ Y + R+ED+ RLF CL+
Sbjct: 77 REIFYKMPLKNGISWN-----GLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVR 131
Query: 103 ---------PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
P +D+ISW+++IAG QNG +E L FF +M + SF+ + C+
Sbjct: 132 KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCS 191
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ L LG+QLH +++ G+ ++ ++LL MY KCG+I AR F ++ D+VSW
Sbjct: 192 NIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNT 251
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A HG +A+++FE M+ G++P+ V+VL ACSHAGL+D+ YF SM +DY
Sbjct: 252 MIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDY 311
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI HY + DLLGRAG+L+EA + NM P W LL A R+H N EL K
Sbjct: 312 GITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 371
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+ IF ++P+N G Y++LS YAA+ RW DA +R+ MRNKG+KK P SW+EV+NK +
Sbjct: 372 AQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHT 431
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD SHP +I L+E+ +++QEGY+ T V HDVEEE+K ++L YHSE+LA+
Sbjct: 432 FKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVA 491
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+GI+ P G IR+IKNLRVC DCH AIK+ISKIV R II+RDN RFH+FE G CSC D+
Sbjct: 492 YGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDF 551
Query: 514 W 514
W
Sbjct: 552 W 552
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+I+ Y + + + + LF +P +D SWN ++ G V+N F +M I
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--- 57
Query: 142 HVSFSSIMPACAHLTTLHLGKQL-HGCIIRNGFDDNMFIAS---------------SLLD 185
VS+++++ A + +++ + ++NG N +A+ S +D
Sbjct: 58 -VSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMD 116
Query: 186 ---MYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ C G +R R +FD M D +SW+A+I G + +G + +A+ F +M++D
Sbjct: 117 WTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCE 176
Query: 240 KPNSVAFVAVLTACSHAGLID 260
+ N +F L+ CS+ ++
Sbjct: 177 RLNRSSFTCALSTCSNIAALE 197
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
++ Y + LAR +FDKM D+ SW ++ G + + A +LFE+M + +
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--- 57
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
V++ A+L+ + G +D+A F M GI+
Sbjct: 58 -VSWNAMLSGYAQNGFVDEAREIFYKMPLKNGIS 90
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 327/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SWNT+I GL G Y EA + M S +++ A + G
Sbjct: 192 MPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAG 251
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++ G+ +V + +LI+MY+KC +ED+ +F +P K + WNSIIAG +
Sbjct: 252 RQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALH 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + +M + +K + +FS I+ CA L +L KQ H ++R+GF ++
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y+K G I A+ +FD M +++SW A+I G HG +A+ +FE+M +G+
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+AVL+ACS++GL D+ W F SM++D+ I P HYA + +LLGR G L EA+
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + PT N+W LL+ACRVHKN EL AEK++ + P + YV+L N Y + R
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
++AA++ ++ +G++ PACSWIE+K + Y F++GDK H I + L EL+ + +
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISK 611
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP K +L DV+E++++ LL YHSE+LAI FG+I T D T ++I+++ R+CGDCH+A
Sbjct: 612 HGYVPQDKFLLPDVDEQEERVLL-YHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSA 670
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK I+ + +REI+VRD SRFHHF+DG CSCGDYW
Sbjct: 671 IKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 176/356 (49%), Gaps = 12/356 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKG 60
P S+L +V R Y EAL + + N DS T +++ +
Sbjct: 94 PSSELCGQIEKLVFFKR---YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGV 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++ Y I GLD + + + ++ M+ KC + D+ RLF +P K+ +SWN+II G V
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + E + F M F +++ A A L + G+QLH C ++ G ++F+A
Sbjct: 211 GDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVA 270
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+L+DMY+KCG+I A+C+FD+M V W ++I G ALHG + +A+S++ +M GVK
Sbjct: 271 CALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK 330
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
++ F ++ C+ ++ A + + +G A+ DL + G++++A
Sbjct: 331 IDNFTFSIIIRICARLASLEHAKQAHAGLVR-HGFGLDIVANTALVDLYSKWGRIEDAKH 389
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
M P +NV W L++ H A ++ E++ + PN++ +LS
Sbjct: 390 VFDMM---PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/546 (41%), Positives = 332/546 (60%), Gaps = 42/546 (7%)
Query: 9 WNTVIVGLARNGLYEEA---LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+N++I R+G L +M + L D+FTL VL AD V G+ +HG
Sbjct: 146 YNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHG 205
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV------- 118
+R GL+ + +G+SLI+MY KC + D+ +LF + V+D SWN++IAG +
Sbjct: 206 QGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGV 265
Query: 119 ------------------------QNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPAC 152
QNG ++ L F +ML +++KP V+ S++PAC
Sbjct: 266 AEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPAC 325
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVS 210
A L G+++H G N + ++L MYAKC ++ ARC FD + + ++++
Sbjct: 326 AQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIA 385
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +I A HG +A+S+FE M + GV+P++V F+ +L+ CSH+GLID ++FN M
Sbjct: 386 WNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMG 445
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM--HAGPTENVWLTLLSACRVHKNVE 328
+ + P EHYA V DLLGRAG+L EA E IS M AGP+ VW LL+ACR H+N+E
Sbjct: 446 TIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPS--VWGALLAACRSHRNLE 503
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+A A ++F+++P+N G YV+LSN YA A W++ LR ++ +GMKK+P CSWIE+
Sbjct: 504 IAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEIN 563
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
K++ F+ DKSHP I + L+ L E+++ GY+PDT VLHD+ EE+K+ L HSE
Sbjct: 564 GKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSE 623
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LAI FG++ T G +R+ KNLR+CGDCH A KFISKI +REIIVRD +RFH F+DG C
Sbjct: 624 KLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSC 683
Query: 509 SCGDYW 514
SCGDYW
Sbjct: 684 SCGDYW 689
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 10/234 (4%)
Query: 45 SSVLPIFADYV--DVIK-GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
SS PIF + IK G++ H + HGL N + + ++ MYA ++ + +F
Sbjct: 78 SSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDR 137
Query: 102 LPVKDAISWNSIIAGCVQNG---LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
+ ++ +NSII ++G L+ + +M + + + ++ +CA L+ +
Sbjct: 138 IDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRV 197
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+G+ +HG +R G + + ++ +SL+DMY KCG I AR +FDKM + D+ SW A+I G
Sbjct: 198 CMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGY 257
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
G A LFE+ME N V++ A+++ + G ++A F+ M +D
Sbjct: 258 MKEGEIGVAEDLFERMEHR----NIVSWTAMISGYTQNGFAEQALGLFDEMLQD 307
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 22/233 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
++VSW +I G +NG E+AL + +M +KP+ T+ SVLP A + +G+
Sbjct: 277 NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRR 336
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQN 120
IH +A GL N + ++L MYAKC + ++ F ++ K+ I+WN++I +
Sbjct: 337 IHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASH 396
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F ML A ++P V+F ++ C+H + G N F+D I
Sbjct: 397 GCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG--------LNHFNDMGTIH 448
Query: 181 S---------SLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
S ++D+ + G + A+ + +M + S W A++ H N
Sbjct: 449 SVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRN 501
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 132/322 (40%), Gaps = 22/322 (6%)
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P S++ I + LG+Q H I+ +G N F+A+ ++ MYA G++ A +
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE---QMEKDGVKPNSVAFVAVLTACSHA 256
FD++D + + ++I HG E +M G+ ++ VL +C+
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
+ + G+ F A++ D+ + G + +A + M + W
Sbjct: 195 SRVCMGRCVHGQGLR-VGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMAS-WNA 252
Query: 317 LLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
L++ K E+ VAE +F ++ N+ ++ + + Y + A L M G
Sbjct: 253 LIAG--YMKEGEIG--VAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDG 308
Query: 376 MKKTPACSWIEVKN------KAYAFVAGDKSHPFYHRI----NEALKELLERMEQEGYVP 425
+ P +W+ + + ++ A G + H F + I N +++ L M + Y
Sbjct: 309 SEMKP--NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSL 366
Query: 426 DTKEVLHDVEEEQKKNLLYYHS 447
D+ + KNL+ +++
Sbjct: 367 VEARCCFDMIAQNGKNLIAWNT 388
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/515 (42%), Positives = 326/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M L+SWN +I G +NG+ E+ + R++ DS TL S++ + D+ G
Sbjct: 307 MCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENG 366
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H IR L++++ + +++++MY+KC ++ + +F + K+ I+W +++ G QN
Sbjct: 367 RILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQN 426
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ LK F QM K+ V+ S++ CAHL +L G+ +H IR+G+ + I
Sbjct: 427 GYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT 486
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+DMYAKCG I A +F+ + L D++ ++IMG +HG+ A+ ++ +M ++ +
Sbjct: 487 SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERL 546
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN FV++LTACSH+GL+++ + F+SM +D+ + P +HYA + DL RAG+L+EA
Sbjct: 547 KPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEAD 606
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E + M P+ +V LLS CR HKN + ++A+++ +D N G YV+LSN YA AR
Sbjct: 607 ELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEAR 666
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+ +R MR +GMKK P S IEV NK Y F A D SHP + I + L+ L +E
Sbjct: 667 KWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVE 726
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
EGY+PDT VL DV E K LL+ HSERLAI FG++ TP G+ I+I KNLRVC DCH
Sbjct: 727 AEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHN 786
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISKIVQREIIVRD +RFHHF +GKCSC D+W
Sbjct: 787 VTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 169/304 (55%), Gaps = 1/304 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V WN++I G + GL+ E++ + +M L+P T++++L G
Sbjct: 206 MPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVG 265
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
H Y + G+ +V + +SL++MY+ + +F + + ISWN++I+G VQN
Sbjct: 266 MCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQN 325
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+ E FR+++ + + S++ C+ + L G+ LH CIIR + ++ ++
Sbjct: 326 GMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLS 385
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMY+KCG I+ A +F +M ++++WTA+++G + +G A DA+ LF QM+++ V
Sbjct: 386 TAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVA 445
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
NSV V+++ C+H G + K + + +G A +A+ D+ + GK+ A +
Sbjct: 446 ANSVTLVSLVHCCAHLGSLTKGRTVHAHFIR-HGYAFDAVITSALIDMYAKCGKIHSAEK 504
Query: 301 FISN 304
+N
Sbjct: 505 LFNN 508
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 150/289 (51%), Gaps = 1/289 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N +I G RN + E + R MG+ +++ +S+T L D +D G EI A+R
Sbjct: 114 NAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVR 173
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G ++ +GSS++N K + D+ ++F +P KD + WNSII G VQ GLF E ++
Sbjct: 174 RGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQM 233
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F +M+ ++P V+ ++++ AC +G H ++ G +++F+ +SL+DMY+
Sbjct: 234 FLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSN 293
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
G+ A +FD M ++SW A+I G +G ++ +LF ++ + G +S V++
Sbjct: 294 LGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSL 353
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ CS ++ + + + + A+ D+ + G +++A
Sbjct: 354 IRGCSQTSDLENGRILHSCIIRKE-LESHLVLSTAIVDMYSKCGAIKQA 401
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
N P F SS+L F++ +I K IH I++ + + + LI +Y+ + +
Sbjct: 43 NQAPSVF--SSLLHQFSN--TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHA 98
Query: 96 HRLF--CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F C LP + N++IAG ++N E + FR M I+ + + AC
Sbjct: 99 RNVFDQCSLP--ETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACT 156
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L +G ++ +R GF ++++ SS+++ K G + A+ +FD M D+V W +
Sbjct: 157 DLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNS 216
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+I G G ++I +F +M G++P+ V +L AC +GL
Sbjct: 217 IIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL 261
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 328/533 (61%), Gaps = 28/533 (5%)
Query: 9 WNTVIVGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHGY 66
WN ++ G ARN ++AL + V + P++ T +SVLP V KE IHGY
Sbjct: 604 WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR-CKVFSDKEGIHGY 662
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G + + ++L++MY++ RVE S +F + +D +SWN++I GC+ G +D+
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Query: 127 LKFFRQMLIAK------------------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
L +M + KP V+ +++P CA L L GK++H
Sbjct: 723 LNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYA 782
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
++ ++ + S+L+DMYAKCG + LA +FD+M + ++++W +IM +HG +A+
Sbjct: 783 VKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEAL 842
Query: 229 SLFEQMEKDG------VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
LF M G ++PN V ++A+ ACSH+G++D+ F++M +G+ P +HY
Sbjct: 843 ELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHY 902
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMID 341
A + DLLGR+G+++EAYE I+ M + + + W +LL ACR+H++VE A+ +F+++
Sbjct: 903 ACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLE 962
Query: 342 PNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSH 401
PN YV++SN Y++A W A +R M+ G++K P CSWIE ++ + F++GD SH
Sbjct: 963 PNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASH 1022
Query: 402 PFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD 461
P ++E L+ L +RM +EGYVPD VLH+V++E+K+ +L HSERLAI FG++ TP
Sbjct: 1023 PQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPP 1082
Query: 462 GTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GTTIR+ KNLRVC DCH A K ISKIV REII+RD RFHHF +G CSCGDYW
Sbjct: 1083 GTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 176/327 (53%), Gaps = 8/327 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
+P D VSWN++I L R +E +L++ R M + N+ P SFTL SV + ++
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H Y +R+G D ++L+ MYA+ RV D+ LF + KD +SWN++I+ Q
Sbjct: 453 GKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQ 511
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMF 178
N F+E L + M++ ++P V+ +S++PAC+ L L +G+++H +RNG +N F
Sbjct: 512 NDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSF 571
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF-EQMEKD 237
+ ++L+DMY C + R +FD + + W A++ G A + A+ LF E + +
Sbjct: 572 VGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISES 631
Query: 238 GVKPNSVAFVAVLTACSHAGLI-DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
PN+ F +VL AC + DK + + + +G ++ A+ D+ R G+++
Sbjct: 632 EFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVE 689
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRV 323
+ M+ + W T+++ C V
Sbjct: 690 ISKTIFGRMNKRDIVS-WNTMITGCIV 715
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
W ++ + + +A++ M PD+F +VL A D+ GK+IH +
Sbjct: 297 QWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHV 356
Query: 68 IR--HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ H ++V + +SL+NMY KC + + ++F +P +D +SWNS+IA + ++
Sbjct: 357 FKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWEL 416
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR ML + P + S+ AC+H+ + LGKQ+H +RNG D + ++L+
Sbjct: 417 SLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALV 475
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYA+ G + A+ +F D D+VSW VI + + +A+ M DGV+P+ V
Sbjct: 476 TMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGV 535
Query: 245 AFVAVLTACSH 255
+VL ACS
Sbjct: 536 TLASVLPACSQ 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 154/305 (50%), Gaps = 35/305 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM------------------GNVNLKPDSF 42
M D+VSWNT+I G G Y++ALN++ +M G V KP+S
Sbjct: 698 MNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSV 757
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
TL +VLP A + KGKEIH YA++ L +V +GS+L++MYAKC + + R+F +
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK------IKPRHVSFSSIMPACAHLT 156
P+++ I+WN +I +G +E L+ FR M I+P V++ +I AC+H
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 157 TLHLGKQL-HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTA 213
+ G L H +G + + L+D+ + G ++ A + + M +L+ + +W++
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSS 937
Query: 214 VIMGNALHGNAHDAISLFEQMEKD--GVKPNSVA-FVAVLTACSHAGLIDKAWSYFNSMT 270
++ + H ++ E K ++PN + +V + S AGL D+A M
Sbjct: 938 LLGACRI----HQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKM- 992
Query: 271 KDYGI 275
K+ G+
Sbjct: 993 KEMGV 997
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 320/544 (58%), Gaps = 31/544 (5%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +D+++WN +I + G +EE+ + M + + P + TL VL + D+ GK
Sbjct: 180 PKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGK 239
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS-------------------------- 95
++H Y +++N+ + +++I+MYA C ++ +
Sbjct: 240 KVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 299
Query: 96 -----HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
F +P KD +SW ++I G +++ F E L+ FR M +KP + S++
Sbjct: 300 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 359
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACAHL L LG+ + I RN +++F+ ++L+DMY KCG++ A IF +M D +
Sbjct: 360 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 419
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
WTA+I+G A++G+ A+ +F M K + P+ + ++ VL+AC+H GL+DK YF MT
Sbjct: 420 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 479
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+GI P+ HY + DLL RAG+L+EAYE I NM VW LL+ CRV++ ++A
Sbjct: 480 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 539
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
V ++I ++P+N YV+L N YAA +RW D LR M +KG+KKTP CS IE+ +
Sbjct: 540 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGR 599
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ FVAGD+SHP I+ L ++ + ++ GY PD EV D+ EE K+N ++ HSE+L
Sbjct: 600 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKL 659
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG+I +P G TIRI KNLR+C DCH K +SK+ RE+IVRD +RFHHF+ G CSC
Sbjct: 660 AIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSC 719
Query: 511 GDYW 514
DYW
Sbjct: 720 KDYW 723
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 90/442 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L WNT+I G +R + +++ +M +KPD +T + F + + G
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 137
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG+ ++HGL NV + ++L+ MY C +++ + +F + P D I+WN II+ +
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 197
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E + F M ++ P V+ ++ AC+ L L GK++H + + N+ +
Sbjct: 198 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 257
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA---------------- 224
++++DMYA CG + A IF M+ DI+SWT ++ G G
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317
Query: 225 ---------------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL----------- 258
+A+ LF M+ VKP+ V+VLTAC+H G
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377
Query: 259 ------------------------IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA-- 292
+DKA S F M++ + + A ++G A
Sbjct: 378 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-------DKFTWTAMIVGLAVN 430
Query: 293 GKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAEKIFM-------IDP 342
G ++A + SNM P E ++ +LSAC H + G+ K F+ I+P
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSAC-THTGLVDKGR---KYFLRMTSQHGIEP 486
Query: 343 NNMGAYVILSNTYAAARRWKDA 364
N+ Y L + A A R K+A
Sbjct: 487 -NIAHYGCLVDLLARAGRLKEA 507
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 133/252 (52%), Gaps = 4/252 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G R+ ++EAL + R M N+KPD FT+ SVL A + G
Sbjct: 311 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 370
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y R+ + ++ + ++LI+MY KC V+ + +F + +D +W ++I G N
Sbjct: 371 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 430
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFI 179
G ++ L F ML A I P +++ ++ AC H + G++ + ++G + N+
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
L+D+ A+ G ++ A + + M + + + W A++ G ++ + A + +Q+ +
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE-- 548
Query: 239 VKPNSVAFVAVL 250
++P++ A +L
Sbjct: 549 LEPDNGAVYVLL 560
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+++H AI+ GL+AN + + ++ + + + RLF +P + WN++I G
Sbjct: 35 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 94
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G+ + +ML +KP +F + L G+QLHG ++++G N+F
Sbjct: 95 RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 154
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MY CG + AR +FD D+++W +I G ++ LF ME
Sbjct: 155 VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 214
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V P +V V VL+ACS + + +S K+ + + A+ D+ G++ A
Sbjct: 215 VLPTTVTLVLVLSACSKLKDL-RTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 273
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+M+ + W T++S +++A +K + + ++ + + Y +
Sbjct: 274 LGIFRSMNNRDIIS-WTTIVSGFTNLGEIDVARNYFDK---MPEKDYVSWTAMIDGYIRS 329
Query: 359 RRWKDAASLRVFMRNKGMK 377
R+K+A L M+ +K
Sbjct: 330 NRFKEALELFRNMQATNVK 348
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/514 (42%), Positives = 333/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+++WN +I G ++ G + +A+++ +M + ++ + TLS+VL A +
Sbjct: 345 MPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVC 404
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH +I+ G+ ++ + +SL++ Y KC ++++ ++F +D +++ S+I Q
Sbjct: 405 KQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQY 464
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E LK + QM A IKP SS++ ACA+L+ GKQLH I+ GF ++F +
Sbjct: 465 GDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFAS 524
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MYAKCG+I A F ++ IVSW+A+I G A HG+ +A+ LF QM +DGV
Sbjct: 525 NSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVP 584
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V+VL AC+HAGL+++ YF M +GI P+ EHYA + DLLGR+GKL EA E
Sbjct: 585 PNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVE 644
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++++ VW LL A R+HKN+EL K A+ +F ++P G +V+L+N YA+A
Sbjct: 645 LVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGM 704
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A +R FM++ +KK P SWIE+K+K Y F+ GD+SH I L +L + + +
Sbjct: 705 WENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSK 764
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY + +H+V++ +K+ LLY+HSE+LA+ FG+I TP G IR+ KNLR+C DCHT
Sbjct: 765 AGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTF 824
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+ KIV REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 825 FKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 156/267 (58%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW++++ G +NG EEAL + +M + +K + FT SVL + D+ G+++H
Sbjct: 46 DVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVH 105
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A+ G +++ + ++L+ MYAKC ++DS RLF + ++ +SWN++ + VQ+ L
Sbjct: 106 GMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCG 165
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + F++M+ + I P S S I+ ACA L LG+++HG +++ G D + F A++L+
Sbjct: 166 EAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALV 225
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+K G I A +F + D+VSW A+I G LH A+ L ++M+ G +PN
Sbjct: 226 DMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMF 285
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ L AC+ G + +S+ K
Sbjct: 286 TLSSALKACAAMGFKELGRQLHSSLIK 312
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 154/294 (52%), Gaps = 1/294 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN + ++ L EA+ + ++M + P+ F++S +L A + G++IH
Sbjct: 147 NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIH 206
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GLD + ++L++MY+K +E + +F + D +SWN+IIAGCV + D
Sbjct: 207 GLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L +M + +P + SS + ACA + LG+QLH +I+ ++F A L+
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KC + AR +D M DI++W A+I G + G+ DA+SLF +M + + N
Sbjct: 327 DMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQT 386
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VL + + I K ++++ GI F ++ D G+ + EA
Sbjct: 387 TLSTVLKSVASLQAI-KVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEA 439
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 140/251 (55%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN +I G + + AL ++ +M +P+ FTLSS L A G+++H
Sbjct: 248 DVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLH 307
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ +++ L++MY+KC ++D+ R + +P KD I+WN++I+G Q G
Sbjct: 308 SSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHL 367
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M I + S+++ + A L + + KQ+H I++G + ++ +SLL
Sbjct: 368 DAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLL 427
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y KC +I A IF++ D+V++T++I + +G+ +A+ L+ QM+ +KP+
Sbjct: 428 DTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPF 487
Query: 245 AFVAVLTACSH 255
++L AC++
Sbjct: 488 ICSSLLNACAN 498
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 143/271 (52%), Gaps = 6/271 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+H + I+ G + + + L+ +Y+KC R + +L D +SW+S+++G VQNG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L F +M + +K +F S++ AC+ L++G+++HG + GF+ + F+A+
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MYAKCG + +R +F + ++VSW A+ +A+ LF++M + G+ P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA--DLLGRAGKLQEAY 299
N + +L AC+ D M K + + ++A A D+ +AG+++ A
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLK---MGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELA 330
++ A P W +++ C +H +LA
Sbjct: 239 AVFQDI-AHPDVVSWNAIIAGCVLHDCNDLA 268
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/510 (40%), Positives = 319/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++I G ++ EEAL ++M + + PD+ L+S A + +G +IH
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIH 470
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ I ++L+N+YA+C R E++ LF + KD I+WN +I+G Q+ L++
Sbjct: 471 ARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYE 530
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L F +M A K +F S + A A+L + GKQ+HG ++ G +A++L+
Sbjct: 531 QALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALI 590
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A+ IF +M L + VSW +I + HG +A+ LF+QM+++G+KPN V
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDV 650
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL ACSH GL+++ SYF SM+ YG+ P +HYA V D+LGRAG+L A F+
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDE 710
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M +W TLLSAC+VHKN+E+ A+ + ++P++ +YV+LSN YA +W +
Sbjct: 711 MPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANR 770
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M+++G++K P SWIEVKN +AF GD+ HP +I + L EL +R+ + GY
Sbjct: 771 DQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYK 830
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+ + H+ E+EQK + HSE+LA+ FG++ P +R+IKNLRVC DCH+ +KF
Sbjct: 831 QENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFT 890
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S++ +REI++RD RFHHF G CSCGDYW
Sbjct: 891 SEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 165/325 (50%), Gaps = 12/325 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V++NT+I G A+ G E AL I +M L+PD T++S+L A D+ KG
Sbjct: 205 MLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKG 264
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y ++ G+ + SL+++Y KC +E +H +F L + + WN ++ Q
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + F QM I P ++ I+ C + LG+Q+H I+NGF+ +M+++
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+K + AR I + ++ D+VSWT++I G H +A++ F++M+ GV
Sbjct: 385 GVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444
Query: 241 PNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
P+++ + +AC+ GL A Y + D I + + +L R G+
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI------WNTLVNLYARCGRS 498
Query: 296 QEAYEFISNMHAGPTENVWLTLLSA 320
+EA+ + E W L+S
Sbjct: 499 EEAFSLFREIDH-KDEITWNGLISG 522
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 162/321 (50%), Gaps = 2/321 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++V WN ++V + ++ I QM + P+ FT +L + G++I
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI 368
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H +I++G ++++ + LI+MY+K ++ + ++ +L +D +SW S+IAG VQ+
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L F++M + P ++ +S ACA + + G Q+H + +G+ ++ I ++L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+++YA+CG A +F ++D D ++W +I G A+ +F +M + G K N
Sbjct: 489 VNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNV 548
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
F++ ++A ++ I + K G E A+ L G+ G +++A S
Sbjct: 549 FTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFS 607
Query: 304 NMHAGPTENVWLTLLSACRVH 324
M E W T++++C H
Sbjct: 608 EMSL-RNEVSWNTIITSCSQH 627
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW ++ G A+ GL +EA + QM + P + LSSVL +G+ IH
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ + +G++LI +Y + + R+FC + D +++N++I+G Q G +
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ F +M ++ ++P V+ +S++ ACA + L GKQLH +++ G + SLL
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y KCG+I A IF+ D ++V W +++ + + +F QM+ G+ PN
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKF 347
Query: 245 AFVAVLTACSHAGLID 260
+ +L C+ G I+
Sbjct: 348 TYPCILRTCTCTGQIE 363
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 148/294 (50%), Gaps = 8/294 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
EIH ++ GL A+ IG+ LI++YAK V + ++F L +D +SW ++++G Q G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L E + + QM + P SS++ AC G+ +H + + F F+ +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ +Y G+ +LA +F M D V++ +I G+A G+ A+ +F++M+ G++P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V ++L AC+ G + K + + K G++ + ++ DL + G ++ A++
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHD- 301
Query: 302 ISNMHAGPTENVWLTLLSA----CRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
I N+ +W +L A + K+ E+ G++ + I PN IL
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM--QATGIHPNKFTYPCIL 353
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + + VSWNT+I +++G EAL++ QM LKP+ T VL + V +G
Sbjct: 609 MSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 668
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ +GL+ + ++++ + +++ + R +P+ +A+ W ++++ C
Sbjct: 669 LSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/511 (41%), Positives = 321/511 (62%), Gaps = 5/511 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I ++ ++++AL ++ M ++P+ +T SSVL DV
Sbjct: 74 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV--- 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H I+ GL+++V + S+LI+++AK ED+ +F + DAI WNSII G QN
Sbjct: 131 RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D L+ F++M A + +S++ AC L L LG Q H I++ +D ++ +
Sbjct: 191 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 248
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG++ AR +F++M D+++W+ +I G A +G + +A+ LFE M+ G K
Sbjct: 249 NALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTK 308
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V VL ACSHAGL++ W YF SM K YGI P EHY + DLLG+AGKL +A +
Sbjct: 309 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVK 368
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P W TLL ACRV +N+ LA A+K+ +DP + G Y +LSN YA +++
Sbjct: 369 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQK 428
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR+ G+KK P CSWIEV + +AF+ GD+SHP +N+ L +L+ R+
Sbjct: 429 WDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIG 488
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL D+E EQ ++ L +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 489 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRICGDCHVF 548
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
K SK+ R I++RD R+HHF+DGKCSCG
Sbjct: 549 CKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 9/285 (3%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
L DS T S ++ + V +G I + +G + + + LINMY K + D+H
Sbjct: 9 LWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAH 68
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
+LF +P ++ ISW ++I+ + + + L+ ML ++P ++SS++ AC ++
Sbjct: 69 QLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMS 128
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
+ + LH II+ G + ++++ S+L+D++AK G A +FD+M D + W ++I
Sbjct: 129 DV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 185
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGI 275
G A + + A+ LF++M++ G +VL AC+ L++ + K D +
Sbjct: 186 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL 245
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ A+ D+ + G L++A + M W T++S
Sbjct: 246 ILN----NALVDMYCKCGSLEDARRVFNQMKERDV-ITWSTMISG 285
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/519 (40%), Positives = 331/519 (63%), Gaps = 13/519 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G ++N +EAL + M + L +S T++ V+P + + IHG+
Sbjct: 285 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 344
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GLD + + ++L++MY++ +++ + R+F + +D ++WN++I G V + ++ L
Sbjct: 345 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 404
Query: 128 KFFRQML-----IAK------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+M ++K +KP ++ +I+P+CA L+ L GK++H I+N +
Sbjct: 405 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 464
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+L+DMYAKCG ++++R +FD++ ++++W +IM +HGN +AI L M
Sbjct: 465 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 524
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GVKPN V F++V ACSH+G++D+ F M DYG+ PS +HYA V DLLGRAG+++
Sbjct: 525 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 584
Query: 297 EAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EAY+ ++ M + W +LL A R+H N+E+ A+ + ++PN YV+L+N Y
Sbjct: 585 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 644
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
++A W A +R M+ +G++K P CSWIE ++ + FVAGD SHP +++ L+ L
Sbjct: 645 SSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLW 704
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
ERM +EGYVPDT VLH+VEE++K+ LL HSE+LAI FGI+ T GT IR+ KNLRVC
Sbjct: 705 ERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCN 764
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFISKIV REII+RD RFH F++G CSCGDYW
Sbjct: 765 DCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 180/346 (52%), Gaps = 29/346 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WNTV+ L +N EAL +R+M ++PD FT+SSVLP + + GKE+H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
YA+++G LD N +GS+L++MY C +V R+F + + WN++IAG QN
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 298
Query: 124 DEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L F M A + + + ++PAC + +HG +++ G D + F+ ++
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 358
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME------- 235
L+DMY++ G I +A IF KM+ D+V+W +I G + DA+ L +M+
Sbjct: 359 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418
Query: 236 ----KDGVKPNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVA 286
+ +KPNS+ + +L +C+ + K A++ N++ D + +A+
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG------SALV 472
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
D+ + G LQ + + + P +NV W ++ A +H N + A
Sbjct: 473 DMYAKCGCLQMSRKVFDQI---PQKNVITWNVIIMAYGMHGNGQEA 515
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 7/305 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV---DVIKGKEI 63
VSWN++I L +E AL R M + N++P SFTL SV+ ++ ++ GK++
Sbjct: 78 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 137
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H Y +R G + N I ++L+ MY K ++ S L +D ++WN++++ QN
Sbjct: 138 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 196
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASS 182
E L++ R+M++ ++P + SS++PAC+HL L GK+LH ++NG D+N F+ S+
Sbjct: 197 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 256
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKP 241
L+DMY C + R +FD M I W A+I G + + + +A+ LF ME+ G+
Sbjct: 257 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 316
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS V+ AC +G + + + K G+ + D+ R GK+ A
Sbjct: 317 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRI 375
Query: 302 ISNMH 306
M
Sbjct: 376 FGKME 380
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 125/230 (54%), Gaps = 7/230 (3%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHG--YAIRHGLDANVCIGSSLINMYAKCARV 92
+ +KPD++ ++L AD D+ GK+IH Y +G+D+ V + ++L+N+Y KC
Sbjct: 4 LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKCGDF 62
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+++F + ++ +SWNS+I+ ++ L+ FR ML ++P + S++ AC
Sbjct: 63 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 122
Query: 153 AHLTT---LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
++L L +GKQ+H +R G + N FI ++L+ MY K G + ++ + D+V
Sbjct: 123 SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 181
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+W V+ + +A+ +M +GV+P+ +VL ACSH ++
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 231
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIASSLLDMYAKCG 191
M++ IKP + +F +++ A A L + LGKQ+H + + G+ D++ +A++L+++Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ +FD++ + VSW ++I A+ F M + V+P+S V+V+T
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 252 ACSH----AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
ACS+ GL+ + + K G SF VA + G+ GKL + + +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRK--GELNSFIINTLVA-MYGKLGKLASSKVLLGSF-G 176
Query: 308 GPTENVWLTLLSA 320
G W T+LS+
Sbjct: 177 GRDLVTWNTVLSS 189
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++++WN +I+ +G +EA++++R M +KP+ T SV + V +G
Sbjct: 491 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 550
Query: 61 KEIH-----GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
I Y + D C+ +++ + R++++++L ++P A +W+S+
Sbjct: 551 LRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 606
Query: 114 IA 115
+
Sbjct: 607 LG 608
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 319/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV W T+I GLA+NG EA++I RQM ++ D + ++ G
Sbjct: 166 MGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMG 225
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHGY IR + +V + +SL++MYAK +E + +F + K+ ISW+++I+G QN
Sbjct: 226 LSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQN 285
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G L+ M KP VS S++ AC+ + L LGK +HG I+R D + +
Sbjct: 286 GFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVS-S 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMY+KCG++ AR +FD++ D +SW A+I +HG+ +A+SLF QM + VK
Sbjct: 345 TAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVK 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL++K +F+ M +Y I PS +HYA + DLL RAG+++EA E
Sbjct: 405 PDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQE 464
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W+ LLS C H + A+K+ ++P++ G Y ++SN +A ARR
Sbjct: 465 LIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARR 524
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R M+ GMKK P S +EV K +AF+ DKSH Y I + L +L M+
Sbjct: 525 WDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKA 584
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T+ VLH++EEE K+ +L HSERLAI FG++ T GT + I KNLRVCGDCH A
Sbjct: 585 MGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEA 644
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REI+VRD RFHHF+DG CSCGDYW
Sbjct: 645 TKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 152/258 (58%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + +WN +I+ +R G EAL++ +M + ++PDS T + VL +D+ G+
Sbjct: 66 PQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGE 125
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E A+ G +V +G++++N+YAKC +++++ R+F + +D + W ++I G QNG
Sbjct: 126 ETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNG 185
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E + +RQM +++ V ++ AC L +G +HG +IR ++ + +
Sbjct: 186 QAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQT 245
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+DMYAK G++ LA C+F +M +++SW+A+I G A +G A +A+ L M+ G KP
Sbjct: 246 SLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKP 305
Query: 242 NSVAFVAVLTACSHAGLI 259
+SV+ V+VL ACS G +
Sbjct: 306 DSVSLVSVLLACSQVGFL 323
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 104/196 (53%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH I G+ + + LI YA+ +E + ++F P +WN++I + G
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E L + +M ++P +++ ++ AC L G++ + G+ D++F+ +
Sbjct: 85 AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
++L++YAKCG + A +FDKM D+V WT +I G A +G A +A+ ++ QM K V+
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204
Query: 242 NSVAFVAVLTACSHAG 257
+ V + ++ AC+ G
Sbjct: 205 DGVVMLGLIQACTTLG 220
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
++H +I G + + L+ YA+ G+I AR +FDK + +W A+I+ + G
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+A+SL+ +M +GV+P+S + VL AC+ + + + D G
Sbjct: 85 AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV-DQGYGDDVFVG 143
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLTLLSA 320
AAV +L + GK+ EA M G + V W T+++
Sbjct: 144 AAVLNLYAKCGKMDEAMRVFDKM--GRRDLVCWTTMITG 180
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 321/515 (62%), Gaps = 6/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLAR-NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++V+W TV+ LA +G EEAL + M + P+++T SSVL V+
Sbjct: 141 MPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGA-CGTPGVLA 199
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+H ++ GLD++V + SSLI+ Y K ++ R+F + +D + WNSIIAG Q
Sbjct: 200 A--LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 257
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G ++ F +M A + +S++ AC + L G+Q+H +++ ++ ++ +
Sbjct: 258 SGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLIL 315
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++LLDMY KCG++ A +F +M D++SW+ +I G A +G + +A+ +F+ M+ +GV
Sbjct: 316 HNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGV 375
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN + V VL ACSHAGL++ W YF SM K +GI P EH+ + DLLGRAGKL EA
Sbjct: 376 APNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAV 435
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI +M+ P +W TLL ACR+HK+ LA A +I ++P++ GA V+LSNTYA R
Sbjct: 436 EFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLR 495
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W DA MR++GMKK P SWIE++ + F+AGD SHP I + L L+ R+
Sbjct: 496 QWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRIS 555
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T+ VL D+ EQK++LL YHSE++AI FG + G IRI+KNLR+CGDCH
Sbjct: 556 ALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHA 615
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK R II+RD RFHHF+DG CSCGDYW
Sbjct: 616 FAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/519 (40%), Positives = 331/519 (63%), Gaps = 13/519 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G ++N +EAL + M + L +S T++ V+P + + IHG+
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GLD + + ++L++MY++ +++ + R+F + +D ++WN++I G V + ++ L
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 128 KFFRQML-----IAK------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+M ++K +KP ++ +I+P+CA L+ L GK++H I+N +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+L+DMYAKCG ++++R +FD++ ++++W +IM +HGN +AI L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GVKPN V F++V ACSH+G++D+ F M DYG+ PS +HYA V DLLGRAG+++
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 297 EAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EAY+ ++ M + W +LL A R+H N+E+ A+ + ++PN YV+L+N Y
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 731
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
++A W A +R M+ +G++K P CSWIE ++ + FVAGD SHP +++ L+ L
Sbjct: 732 SSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLW 791
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
ERM +EGYVPDT VLH+VEE++K+ LL HSE+LAI FGI+ T GT IR+ KNLRVC
Sbjct: 792 ERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCN 851
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFISKIV REII+RD RFH F++G CSCGDYW
Sbjct: 852 DCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 180/346 (52%), Gaps = 29/346 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WNTV+ L +N EAL +R+M ++PD FT+SSVLP + + GKE+H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
YA+++G LD N +GS+L++MY C +V R+F + + WN++IAG QN
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 124 DEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L F M A + + + ++PAC + +HG +++ G D + F+ ++
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME------- 235
L+DMY++ G I +A IF KM+ D+V+W +I G + DA+ L +M+
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 236 ----KDGVKPNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVA 286
+ +KPNS+ + +L +C+ + K A++ N++ D + +A+
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG------SALV 559
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
D+ + G LQ + + + P +NV W ++ A +H N + A
Sbjct: 560 DMYAKCGCLQMSRKVFDQI---PQKNVITWNVIIMAYGMHGNGQEA 602
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 7/305 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV---DVIKGKEI 63
VSWN++I L +E AL R M + N++P SFTL SV+ ++ ++ GK++
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H Y +R G + N I ++L+ MY K ++ S L +D ++WN++++ QN
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASS 182
E L++ R+M++ ++P + SS++PAC+HL L GK+LH ++NG D+N F+ S+
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKP 241
L+DMY C + R +FD M I W A+I G + + + +A+ LF ME+ G+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS V+ AC +G + + + K G+ + D+ R GK+ A
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 302 ISNMH 306
M
Sbjct: 463 FGKME 467
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 135/256 (52%), Gaps = 7/256 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG--Y 66
W ++ R+ L EA+ M + +KPD++ ++L AD D+ GK+IH Y
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+G+D+ V + ++L+N+Y KC +++F + ++ +SWNS+I+ ++
Sbjct: 125 KFGYGVDS-VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTT---LHLGKQLHGCIIRNGFDDNMFIASSL 183
L+ FR ML ++P + S++ AC++L L +GKQ+H +R G + N FI ++L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY K G + ++ + D+V+W V+ + +A+ +M +GV+P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 244 VAFVAVLTACSHAGLI 259
+VL ACSH ++
Sbjct: 303 FTISSVLPACSHLEML 318
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++++WN +I+ +G +EA++++R M +KP+ T SV + V +G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 61 KEIH-----GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
I Y + D C+ +++ + R++++++L ++P A +W+S+
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 114 I-AGCVQNGL 122
+ A + N L
Sbjct: 694 LGASRIHNNL 703
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/517 (43%), Positives = 321/517 (62%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ WN +I AR G E A+ + R M ++PD+FT VL A +D+ G
Sbjct: 123 MPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETG 182
Query: 61 KEIHGY--AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+E+H R G D VC G +++MYAKC V+D+ +F + V+DA+ WNS+IA
Sbjct: 183 REVHQRVSGTRWGQDVFVCAG--VVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYG 240
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E L R M I P + S + A A L G++LHG R GF
Sbjct: 241 QNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDK 300
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAK G +++AR +F+++ ++VSW A+I G +HG+A +A++LF +M+ D
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDA 360
Query: 239 -VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
V P+++ FV VL+AC+H G++++A +F M Y I P+ +HY V D+LG G+ +E
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEE 420
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY+ I M P +W LL+ C++HKNVEL +K+ ++P + G YV LSN YA
Sbjct: 421 AYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQ 480
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+ +W+ AA +R M N+G+KK ACSWIE+K K + F+ GD SHP I L+ L
Sbjct: 481 SGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGL 540
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M GYVPD V H+V++++K+N++ HSERLAI FG+I TP GT + + KNLRVC DC
Sbjct: 541 MSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDC 600
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H IK IS+IVQREII+RD +R+HHF +G+CSC DYW
Sbjct: 601 HVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 102/183 (55%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++HG + GL + + + L+++YA C +V + RLF +P ++ WN +I +
Sbjct: 81 GRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAR 140
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G + ++ +R M+ ++P + ++ ++ ACA L L G+++H + + ++F+
Sbjct: 141 EGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFV 200
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ ++DMYAKCG + AR +FD + + D V W ++I +G +A++L M +G+
Sbjct: 201 CAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGI 260
Query: 240 KPN 242
P
Sbjct: 261 GPT 263
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+SI+ +C +L G+QLHG ++ +G + +++ L+D+YA CG + AR +FD M
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
++ W +I A G A+ L+ M + GV+P++ + VL AC A L+D
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKAC--AALLD 178
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/519 (40%), Positives = 331/519 (63%), Gaps = 13/519 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G ++N +EAL + M + L +S T++ V+P + + IHG+
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GLD + + ++L++MY++ +++ + R+F + +D ++WN++I G V + ++ L
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 128 KFFRQML-----IAK------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+M ++K +KP ++ +I+P+CA L+ L GK++H I+N +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+L+DMYAKCG ++++R +FD++ ++++W +IM +HGN +AI L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GVKPN V F++V ACSH+G++D+ F M DYG+ PS +HYA V DLLGRAG+++
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 297 EAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EAY+ ++ M + W +LL A R+H N+E+ A+ + ++PN YV+L+N Y
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 731
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
++A W A +R M+ +G++K P CSWIE ++ + FVAGD SHP +++ L+ L
Sbjct: 732 SSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLW 791
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
ERM +EGYVPDT VLH+VEE++K+ LL HSE+LAI FGI+ T GT IR+ KNLRVC
Sbjct: 792 ERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCN 851
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFISKIV REII+RD RFH F++G CSCGDYW
Sbjct: 852 DCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 180/346 (52%), Gaps = 29/346 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WNTV+ L +N EAL +R+M ++PD FT+SSVLP + + GKE+H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
YA+++G LD N +GS+L++MY C +V R+F + + WN++IAG QN
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 124 DEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L F M A + + + ++PAC + +HG +++ G D + F+ ++
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME------- 235
L+DMY++ G I +A IF KM+ D+V+W +I G + DA+ L +M+
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 236 ----KDGVKPNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVA 286
+ +KPNS+ + +L +C+ + K A++ N++ D + +A+
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG------SALV 559
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
D+ + G LQ + + + P +NV W ++ A +H N + A
Sbjct: 560 DMYAKCGCLQMSRKVFDQI---PQKNVITWNVIIMAYGMHGNGQEA 602
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 7/305 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV---DVIKGKEI 63
VSWN++I L +E AL R M + N++P SFTL SV+ ++ ++ GK++
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H Y +R G + N I ++L+ MY K ++ S L +D ++WN++++ QN
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASS 182
E L++ R+M++ ++P + SS++PAC+HL L GK+LH ++NG D+N F+ S+
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKP 241
L+DMY C + R +FD M I W A+I G + + + +A+ LF ME+ G+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS V+ AC +G + + + K G+ + D+ R GK+ A
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 302 ISNMH 306
M
Sbjct: 463 FGKME 467
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 135/256 (52%), Gaps = 7/256 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG--Y 66
W ++ R+ L EA+ M + +KPD++ ++L AD D+ GK+IH Y
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+G+D+ V + ++L+N+Y KC +++F + ++ +SWNS+I+ ++
Sbjct: 125 KFGYGVDS-VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTT---LHLGKQLHGCIIRNGFDDNMFIASSL 183
L+ FR ML ++P + S++ AC++L L +GKQ+H +R G + N FI ++L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY K G + ++ + D+V+W V+ + +A+ +M +GV+P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 244 VAFVAVLTACSHAGLI 259
+VL ACSH ++
Sbjct: 303 FTISSVLPACSHLEML 318
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++++WN +I+ +G +EA++++R M +KP+ T SV + V +G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 61 KEIH-----GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
I Y + D C+ +++ + R++++++L ++P A +W+S+
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 114 I-AGCVQNGL 122
+ A + N L
Sbjct: 694 LGASRIHNNL 703
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 324/514 (63%), Gaps = 8/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWNT+I G A+NG ++A ++ M N + S+++ + ++ D+
Sbjct: 162 MPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYVEHGDLEAA 217
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E++ G+ + V + ++++ Y K +VE + R+F + VK+ ++WNS+IAG V+N
Sbjct: 218 EELYKNV---GMKS-VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++GLK F+ M+ ++++P +S SS++ C++L+ L LG+Q+H + ++ +
Sbjct: 274 CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTAC 333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KCG++ A +F +M D+++W A+I G A HG A+ LF++M +K
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FVAV+ AC+HAG +D YF SM K++GI HY V DLLGRAG+L EA
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P ++ TLL ACR+HKN++LA A + +DP + YV L+N YAA +
Sbjct: 454 LIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNK 513
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M+ + K P SWIE+K+ + F + D+ HP I++ L EL +M+
Sbjct: 514 WDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKL 573
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD + LHDVEEE K+ LL +HSE+LAI FG++ T GT IR+ KNLRVCGDCH A
Sbjct: 574 AGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRA 633
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFIS I +REIIVRD +RFHHF +G CSCGDYW
Sbjct: 634 IKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 33/341 (9%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI-KGKE 62
SD+VS N I R E A N+ +M + T +++L + Y V K KE
Sbjct: 71 SDVVSLNKTIASFVRACDLESARNVFEKMSVRT----TVTWNTML---SGYTKVAGKVKE 123
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H + +V L+ Y + V+ + F +PVKD SWN++I+G QNG
Sbjct: 124 AHELFDKIPEPDSVSYNIMLV-CYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQ 182
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ F M + VS+S+++ L ++L+ +N ++ + ++
Sbjct: 183 MQKAFDLFSVM----PEKNGVSWSAMISGYVEHGDLEAAEELY----KNVGMKSVVVETA 234
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+L Y K G + LA IF +M + ++V+W ++I G + A D + +F+ M + V+PN
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPN 294
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAY 299
++ +VL CS+ + ++K +P + A L+ + G L A+
Sbjct: 295 PLSLSSVLLGCSNLSALPLGRQMHQLVSK----SPLSKDTTACTSLISMYCKCGDLDSAW 350
Query: 300 EFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
+ M P ++V W ++S H AG+ A +F
Sbjct: 351 KLFLEM---PRKDVITWNAMISGYAQHG----AGRKALHLF 384
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 145 FSSIMPACAHLTTLHLG---------------KQLHGCIIRNGFDDNMFI--ASSLLDM- 186
F +P AH LHLG +++H + N N+ + AS ++ +
Sbjct: 19 FRHFLPIEAHFRNLHLGSNEESSSIASSIHPPRRIH-LVSPNNVTPNLHVDTASDVVSLN 77
Query: 187 -----YAKCGNIRLARCIFDKMDLHDIVSWTAVIMG-NALHGNAHDAISLFEQMEKDGVK 240
+ + ++ AR +F+KM + V+W ++ G + G +A LF+++ +
Sbjct: 78 KTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP----E 133
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSM-TKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+SV++ +L + + A ++FN M KD + + + G++Q+A+
Sbjct: 134 PDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIA------SWNTLISGFAQNGQMQKAF 187
Query: 300 EFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFM 339
+ S M P +N W ++S H ++E A ++ + + M
Sbjct: 188 DLFSVM---PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGM 226
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/507 (41%), Positives = 320/507 (63%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G +NG +AL++ M L+PD FT++S+L A + GKEIHG
Sbjct: 469 SWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM 528
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+R+G + + I SL+++Y +C ++ + F + K+ + WN++I G QN + L
Sbjct: 529 LRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDAL 588
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F QML +KI P +S + AC+ ++ L LGK+LH +++ ++ F+ SL+DMY
Sbjct: 589 DMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMY 648
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG + ++ IFD++ L V+W +I G +HG+ AI LF+ M+ G +P+SV F+
Sbjct: 649 AKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFI 708
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
A+LTAC+HAGL+ + Y M +GI P EHYA V D+LGRAG+L EA E ++ +
Sbjct: 709 ALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPD 768
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P +W +LLS+CR ++++++ KVA K+ + P+ YV++SN YA +W + +
Sbjct: 769 KPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKM 828
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M+ G++K CSWIE+ K F+ GD+S +I + EL +++ + GY PDT
Sbjct: 829 RQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDT 888
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
VLH++EE++K +L HSE+LAI FG++ T GTT+R+ KNLR+C DCH AIK +SKI
Sbjct: 889 SCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKI 948
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
+REIIVRDN RFHHF++G CSCGDYW
Sbjct: 949 DKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 176/322 (54%), Gaps = 4/322 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++SWN++I G +++ + A ++R+M + +K + TL +VLP+ + + +K KEI
Sbjct: 363 NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEI 422
Query: 64 HGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
HGYA+RHG + ++ + ++ + YAKC + + +FC + K SWN++I G VQNG
Sbjct: 423 HGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGF 482
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L + M + ++P + +S++ ACA L +L GK++HG ++RNGF+ + FI S
Sbjct: 483 PRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICIS 542
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +Y +CG I LA+ FD M+ ++V W +I G + + DA+ +F QM + P+
Sbjct: 543 LVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPD 602
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
++ + L ACS + K + SF ++ D+ + G ++++
Sbjct: 603 EISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFV-TCSLIDMYAKCGCMEQSQNIF 661
Query: 303 SNMHAGPTENVWLTLLSACRVH 324
+H E W L++ +H
Sbjct: 662 DRVHL-KGEVTWNVLITGYGIH 682
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 144/253 (56%), Gaps = 5/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN ++ G RN L+ +A+ + +M ++ PD+FTL V+ DV G+ +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG+A++ + ++V +G++LI MY K VE + ++F +P ++ +SWNS++ C++NG+F
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 124 DEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E F+ +L + P + +++P CA + LG HG ++ G + + S
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVK 240
SLLDMY+KCG + AR +FD + +++SW ++I G + + A L +M+ +D VK
Sbjct: 339 SLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397
Query: 241 PNSVAFVAVLTAC 253
N V + VL C
Sbjct: 398 VNEVTLLNVLPVC 410
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 162/309 (52%), Gaps = 6/309 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +LVSWN+V+ NG++EE+ + + + G+ L PD T+ +V+P+ A +V
Sbjct: 257 MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVR 316
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G HG A++ GL + + SSL++MY+KC + ++ LF K+ ISWNS+I G
Sbjct: 317 LGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYS 375
Query: 119 QNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDN 176
++ F + R+M + K+K V+ +++P C K++HG +R+GF +
Sbjct: 376 KDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSD 435
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+A++ + YAKCG++ A +F M+ + SW A+I G+ +G A+ L+ M
Sbjct: 436 ELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG 495
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G++P+ ++L+AC+ + SM ++ F + V+ L + GK+
Sbjct: 496 SGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVS-LYVQCGKIL 554
Query: 297 EAYEFISNM 305
A F NM
Sbjct: 555 LAKLFFDNM 563
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 144/292 (49%), Gaps = 11/292 (3%)
Query: 16 LARNGLYEEALNIVRQ-----MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY-AIR 69
L G +A N ++ + + N KP + +L + +Y ++ G++IH + +
Sbjct: 64 LCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQL-IGLLLQLCGEYKNIEIGRKIHNFISTS 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+V + + L+ MY+ C DS +F K+ WN++++G ++N LF + +
Sbjct: 123 PHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFV 182
Query: 130 FRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M+ + + P + + ++ AC + + LG+ +HG ++ ++F+ ++L+ MY
Sbjct: 183 FVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYG 242
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAF 246
K G + A +FDKM ++VSW +V+ +G ++ LF+ + +G+ P+
Sbjct: 243 KFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATM 302
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V V+ C+ G + + F+ + G+ + +++ D+ + G L EA
Sbjct: 303 VTVIPLCARQGEV-RLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 325/549 (59%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +VSWN VI G +NGL +AL R + + PD FT++SVL A+ V
Sbjct: 254 MPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSI 313
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH----------------------- 96
GK++H Y +R + + ++LI+MYAK VE++
Sbjct: 314 GKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGY 373
Query: 97 ----------RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
+F ++ +D ++W ++I G QNG DE ++ FR M+ + +P + +
Sbjct: 374 VKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVA 433
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ CA L L GKQ+H IR+ + + +++S++ MYA+ G++ AR +FD++
Sbjct: 434 AVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWR 493
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ V+WT++I+ A HG DA+ LFE+M + GVKP+ + FV VL+AC+H G +D+ Y
Sbjct: 494 KETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRY 553
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F + +GI P HYA + DLL RAG EA EFI M P W +LLSACRVHK
Sbjct: 554 FQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHK 613
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N +LA AEK+ IDP N GAY LSN Y+A RW DAA + ++K +KK SW
Sbjct: 614 NADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWT 673
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+ N+ + F A D HP + ++ + +++ G+VPD + VLHDV++E K+ +L
Sbjct: 674 HIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSR 733
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG++ TP+ TT+RI+KNLRVC DCHTAIKFISK+ REII+RD +RFHHF+D
Sbjct: 734 HSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKD 793
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 794 GFCSCKDYW 802
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 187/409 (45%), Gaps = 74/409 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++VGL R G + EA+ + M L P FTL++VL A G
Sbjct: 122 MPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVG 181
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVE-----------------------DSH- 96
+++H + ++ GL + V + +S++NMY KC E D+H
Sbjct: 182 RKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHL 241
Query: 97 -------RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
LF +P + +SWN++IAG QNGL + L FF +ML + + P + +S+
Sbjct: 242 GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSV 301
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGF---------------------------------DD 175
+ ACA+L + +GKQ+H I+R+ D
Sbjct: 302 LSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADL 361
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ ++LL+ Y K G+++ AR +FD M D+V+WTA+I+G +G+ +A+ LF M
Sbjct: 362 NVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMI 421
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD----LLGR 291
+ G +PNS AVL+ C+ ++ + I E ++V++ + R
Sbjct: 422 RSGPEPNSYTVAAVLSVCASLACLE-----YGKQIHCKAIRSLQEQSSSVSNSIVTMYAR 476
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI 340
+G L A +H W +++ A H E A + E++ +
Sbjct: 477 SGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRV 525
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 140/275 (50%), Gaps = 13/275 (4%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV +SL+++YAK R+ D+ +F +P +D +SW ++ G + G F E +K F M+
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ P + ++++ +CA +G+++H +++ G + +A+S+L+MY KCG+
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
AR +F++M + SW A++ +A G A+SLFE M + V++ AV+ +
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI----VSWNAVIAGYN 270
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPS----FEHYAAVADL-LGRAGKLQEAYEFISNM-HAG 308
GL KA +F+ M +AP +A A+L + GK AY S M + G
Sbjct: 271 QNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIG 330
Query: 309 PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
N L+S +VE A V ++ M D N
Sbjct: 331 QVTN---ALISMYAKSGSVENARGVMQQAVMADLN 362
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 310/483 (64%), Gaps = 14/483 (2%)
Query: 45 SSVLPIFADYVDVIK----------GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
+ + P +++Y +++ GK++H G + I + L+N+Y C +
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ LF +P + WN +I G NG ++ ++ + QM + P + +F ++ ACA
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD---IVSW 211
L+ + G+++H +++ G++ ++F+ ++L+DMYAKCG + AR +FDK+ + D +VSW
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSW 248
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
A+I G A+HG+A +A+ LFE+M + KP+ + FV VL+ACSH GL+++ W +F +M +
Sbjct: 249 NAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIR 307
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
DY I P+ +HY + DLLG +G+L EAY I M P VW LL++C++H NVEL
Sbjct: 308 DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGE 367
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
E++ ++P++ G YVILSN YA A +W+ A LR M ++ +KK+ ACSWIEVKNK
Sbjct: 368 IALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKV 427
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+AF++GD SHP I L+ + M++ GY P T V HDVE+++K N++ HSERLA
Sbjct: 428 HAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLA 487
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I FG+I TP GT + I KNLR+C DCH AIKFISKI +REI VRD +R+HHF+DG CSCG
Sbjct: 488 IAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCG 547
Query: 512 DYW 514
DYW
Sbjct: 548 DYW 550
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN +I G A NG YE A+ + QM + L PD+FT VL A + G
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA---ISWNSIIAGC 117
+EIH + ++ G + +V +G++LI+MYAKC V + +F + V+DA +SWN++I G
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGY 255
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDN 176
+G E L F +M KP H++F ++ AC+H L G +IR+ D
Sbjct: 256 AMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPT 314
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGN 223
+ + ++D+ G + A + +M L D W A++ +H N
Sbjct: 315 VQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN 362
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/507 (41%), Positives = 314/507 (61%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SW+ ++ G A+ G + + R++ D ++ V+ D D+ G+ IH
Sbjct: 118 SWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCIT 177
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GLD + ++L++MYA+C VED+H++F + +D +W +I ++G+ E L
Sbjct: 178 LKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESL 237
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FF +M I P V+ +++ ACA L ++ K +H I G+ ++ + ++++DMY
Sbjct: 238 VFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMY 297
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG++ AR IFD+M + ++++W+A+I HG A+ LF M + G+ PN + FV
Sbjct: 298 AKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFV 357
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
++L ACSHAGLI++ +F+SM +YG+ P +HY + DLLGRAG+L EA E I M
Sbjct: 358 SLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPV 417
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
E +W LL ACR+H++++LA +VA + + G YV+LSN YA A +W+D A
Sbjct: 418 EKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKT 477
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M G++K P +WIEV K Y F GDK+HP + I + LK L E++E GY PDT
Sbjct: 478 RDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDT 537
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
+VL+DV+EE K+ LLY HSE+LAI FG++ P G IRI KNLRVCGDCHT KF+S I
Sbjct: 538 NDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLI 597
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
Q+ IIVRD RFHHF++G CSC DYW
Sbjct: 598 EQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 6/277 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
++ + +++H +G N+ + + L+ MY + +ED+ LF + + SW+ I+
Sbjct: 65 NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVG 124
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + G F FR++L + S ++ AC L L G+ +H ++ G D
Sbjct: 125 GYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDY 184
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
F+ ++L+DMYA+C + A IF KM D+ +WT +I A G +++ F++M
Sbjct: 185 GHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR 244
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+ P+ VA V V+ AC+ G ++KA ++ G + A+ D+ + G +
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKA-KAIHAYINGTGYSLDVILGTAMIDMYAKCGSV 303
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
+ A M NV W +++A H E A
Sbjct: 304 ESARWIFDRMQ---VRNVITWSAMIAAYGYHGQGEKA 337
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL +W +I LA +G+ E+L +M N + PD L +V+ A + K K IH
Sbjct: 216 DLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIH 275
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y G +V +G+++I+MYAKC VE + +F + V++ I+W+++IA +G +
Sbjct: 276 AYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGE 335
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ F ML + I P ++F S++ AC+H + G++ SS+
Sbjct: 336 KALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFF---------------SSMW 380
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y +++ C+ D ++G A G +A+ + E M V+ + V
Sbjct: 381 DEYGVTPDVKHYTCMVD-------------LLGRA--GRLDEALEMIEGMP---VEKDEV 422
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ A+L AC +D A S+ K P HY ++++ AGK ++
Sbjct: 423 LWGALLGACRIHRHLDLAERVARSLLKLQSQKPG--HYVLLSNIYANAGKWED 473
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 323/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ D+VSW ++I G ++ +EAL + M + PD+ L+S + A + +G
Sbjct: 406 LEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH G A+V I ++L+N+YA+C R +++ LF + KD I+WN +++G Q+
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL++E L+ F +M A +K +F S + A A+L + GKQ+H +I+ G +A
Sbjct: 526 GLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVA 585
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG+I A+ F +M + VSW +I + HG +A+ LF+QM+++G+K
Sbjct: 586 NALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLK 645
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ VL ACSH GL+++ YF SM+ ++GI P +HYA V D+LGRAG+L A +
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARK 705
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M VW TLLSACRVHKN+E+ A+ + ++P++ +YV+LSN YA +
Sbjct: 706 FVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGK 765
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M+++G++K P SWIEVKN +AF GD+ HP H+I + L +L +R+ +
Sbjct: 766 WACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAK 825
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+ + H+ E+EQK + HSE+LA+ FG++ P +R+IKNLRVC DCHT
Sbjct: 826 IGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTW 885
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KF S+++ REI++RD RFHHF +G CSCGD+W
Sbjct: 886 MKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 159/302 (52%), Gaps = 1/302 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V++NT+I A+ G E AL I +M PD T++S+L A D+ KG
Sbjct: 204 MPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKG 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y ++ G+ + I SL+++Y KC + ++ +F + + WN ++ Q
Sbjct: 264 KQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQI 323
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ F QM+ A ++P ++ ++ C + ++LG+Q+H I+ GF+ +M+++
Sbjct: 324 SDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVS 383
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+K G + AR I + ++ D+VSWT++I G H +A+ F+ M+ G+
Sbjct: 384 GVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIW 443
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+++ + ++AC+ + + +S G + + A+ +L R G+ +EA+
Sbjct: 444 PDNIGLASAISACAGIKAMRQG-QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFS 502
Query: 301 FI 302
Sbjct: 503 LF 504
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 173/348 (49%), Gaps = 4/348 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ D VSW ++ G ARNGL EEA+ + QM + P + LSSVL +G
Sbjct: 103 LSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQG 162
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + G + +G++LI +Y + + + R+F +P D +++N++I+ Q
Sbjct: 163 RLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQC 222
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L+ F +M ++ P V+ +S++ ACA + L+ GKQLH +++ G + I
Sbjct: 223 GNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIE 282
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SLLD+Y KCG I A IF D ++V W +++ + + LF QM GV+
Sbjct: 283 GSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVR 342
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +L C++AG I+ + ++ G + D+ + G L +A
Sbjct: 343 PNEFTYPCLLRTCTYAGEINLG-EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARR 401
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE--KIFMIDPNNMG 346
+ + A + W ++++ H+ + A + + ++F I P+N+G
Sbjct: 402 ILEVLEAKDVVS-WTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIG 448
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 173/325 (53%), Gaps = 10/325 (3%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++V WN ++V + ++ ++ QM ++P+ FT +L ++ G++I
Sbjct: 308 TNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI 367
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H +I+ G ++++ + LI+MY+K ++ + R+ +L KD +SW S+IAG VQ+
Sbjct: 368 HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFC 427
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+ F+ M + I P ++ +S + ACA + + G+Q+H + +G+ ++ I ++L
Sbjct: 428 KEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNAL 487
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+++YA+CG + A +F+ ++ D ++W ++ G A G +A+ +F +M + GVK N
Sbjct: 488 VNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNV 547
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA----Y 299
FV+ ++A ++ I + ++ K G E A+ L G+ G +++A +
Sbjct: 548 FTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFF 606
Query: 300 EFISNMHAGPTENVWLTLLSACRVH 324
E H W T++++C H
Sbjct: 607 EMSERNHVS-----WNTIITSCSQH 626
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 133/260 (51%), Gaps = 6/260 (2%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH AI GL + G+ LI++YAK V+ + R+F L +D +SW ++++G +NGL
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+E + + QM + + P SS++ AC G+ +H + + G + ++
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +Y + G++ LA +F +M D V++ +I +A GN A+ +FE+M G P+
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V ++L AC+ G ++K + + K G++P + ++ DL + G + EA E
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 303 SNMHAGPTENV--WLTLLSA 320
+G NV W +L A
Sbjct: 303 K---SGDRTNVVLWNLMLVA 319
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 319/516 (61%), Gaps = 3/516 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P+ D SWNT+I GL R+G +AL+ +R+M + + +T S+ + + G+
Sbjct: 205 PLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGR 264
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGCV 118
++HG + L+ + + SSL++MY KC +E + +F L +W++++AG V
Sbjct: 265 QLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYV 324
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG +E L FR+ML + + +S+ ACA++ + G+Q+HGC+ + + +
Sbjct: 325 QNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAP 384
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+AS+++DMYAKCGN+ AR IFD+ +I WT+++ A HG AI LFE+M +
Sbjct: 385 LASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEK 444
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ PN + V VL+ACSH GL+ + YF M ++YGI PS EHY + DL GR+G L +A
Sbjct: 445 MTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA 504
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
FI + VW TLLSACR+H++ E A +EK+ ++ + G+YV+LSN YA
Sbjct: 505 KNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATN 564
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W D LRV M+ + ++K P SWI +KN + FVAGD SHP I L++L+ER+
Sbjct: 565 NKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERL 624
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GY T V+HDVE+EQ++ L +HSE+LAI FGII TP GT +RI KNLRVC DCH
Sbjct: 625 KEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCH 684
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+IS REI+VRD RFHHF+D CSC D+W
Sbjct: 685 EAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 185/395 (46%), Gaps = 53/395 (13%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P W I G AR G Y + + +M P++F L++V+ A DV G
Sbjct: 72 PTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESG 131
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG+ +R+G+ +V + +++++MYAKC + E + R+F + +DA+SWN I C+Q+
Sbjct: 132 KRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQS 191
Query: 121 G-------LFDE------------------------GLKFFRQMLIAKIKPRHVSFSSIM 149
G LFDE L R+M A + H ++S+
Sbjct: 192 GDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAF 251
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD--LHD 207
L LG+QLHG ++ + + F+ SSL+DMY KCG + A +FD D
Sbjct: 252 VLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRD 311
Query: 208 I-VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
+ +W+ ++ G +G +A+ LF +M ++GV + +V AC++ G++++
Sbjct: 312 MNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVH 371
Query: 267 NSMTK-----DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLS 319
+ K D +A +A+ D+ + G L++A T+N VW ++L
Sbjct: 372 GCVEKLWYKLDAPLA------SAIVDMYAKCGNLEDARSIFDR---ACTKNIAVWTSMLC 422
Query: 320 ACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ H +A ++ E++ + PN + +LS
Sbjct: 423 SYASHGQGRIAIELFERMTAEKMTPNEITLVGVLS 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+++G+ G ++ L +S++ + + R D+ +F P + A W I+G
Sbjct: 26 LLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISG 85
Query: 117 CVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
C + G + +G++ F +ML + P ++++ CA + + GK++HG ++RNG
Sbjct: 86 CARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHL 145
Query: 176 NMFIASSLLDMYAKCG--------------------NIRLARCI-----------FDKMD 204
++ + +++LDMYAKCG NI + CI FD+
Sbjct: 146 DVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESP 205
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN----SVAFV 247
L D SW +I G G+A DA+S +M + GV N S AFV
Sbjct: 206 LRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFV 252
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-V 239
+S+L + + AR +FD+ WT I G A G D + F +M +G
Sbjct: 49 ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN+ AV+ C+ G ++ M ++ G+ AV D+ + G+ + A
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN-GVHLDVVLCNAVLDMYAKCGQFERAR 167
Query: 300 EFISNMHAGPTENVWLTLLSAC 321
M A W + AC
Sbjct: 168 RVFGAM-AERDAVSWNIAIGAC 188
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/511 (41%), Positives = 331/511 (64%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V + +IVG + +G E+L + R M ++ + +TLSSVL + D+ G+ IH
Sbjct: 242 DVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIH 301
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL++ V +SL+ MY +C V+DS ++F + ++W S+I G VQNG +
Sbjct: 302 GLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREE 361
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FRQML + I P + SS++ AC+ L L GKQ+H +++ G D + ++ ++L+
Sbjct: 362 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 421
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y KCG+ +AR +F+ + D+VS ++I A +G H+A+ LF M+ G++PN+V
Sbjct: 422 DFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNV 481
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++ VL+AC++AGL+++ F+S I + +HYA + DLLGRAG+L+EA I+
Sbjct: 482 TWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQ 541
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
++ +W TLLSACR+H +VE+A +V ++ + P + G +V+LSN YA+ W
Sbjct: 542 VNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKV 600
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++ MR +KK PA SW++V+ + + F+AGD SHP + I E L+EL+E++++ GYV
Sbjct: 601 IEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYV 660
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTP-DGTTIRIIKNLRVCGDCHTAIKF 483
PDT+ VL D++EE+K LYYHSE+LA+ F + + TTIRI+KNLRVCGDCHT +KF
Sbjct: 661 PDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKF 720
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKIV R+II RD RFHHF +G CSCGDYW
Sbjct: 721 VSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 155/314 (49%), Gaps = 13/314 (4%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I +A++ G + +G+ LI+ Y KC V + ++F +P + ++WNS+IA ++NG
Sbjct: 98 KIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 155
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIA 180
E + +++M+ I P +FSS+ A + L +H G++ HG + G N+F+
Sbjct: 156 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 215
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAK G +R AR + D++ D+V +TA+I+G + HG +++ +F M K G++
Sbjct: 216 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 275
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N +VL C + + + + G+ + ++ + R G + ++ +
Sbjct: 276 ANEYTLSSVLVCCGNLEDLTSG-RLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLK 334
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
P + W +++ V L E+I ++ M I N++ +
Sbjct: 335 VFKQF-INPNQVTWTSVI--------VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSV 385
Query: 361 WKDAASLRVFMRNK 374
+ +SL + + K
Sbjct: 386 LRACSSLAMLEQGK 399
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 333/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP LVSWNT+I L +NG EAL+++ QM FT+SSVL A + +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +AI+ +D NV + ++L+++YAKC ++D+ +F +P + ++W+S+ AG VQN
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++++ L FR+ +K SS++ ACA L + GKQ++ + ++GF N+F+A
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVA 304
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCG I + +F ++ ++V W A+I G + H + + + LFE+M++ G+
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V FV+VL+AC H GL+ K YF+ MTK++ +AP+ HY+ + D L RAG++ EAY+
Sbjct: 365 PNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYD 424
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
IS + + ++W +LL++CR H N+ELA A+K+F I+P+N G Y++LSN YAA +
Sbjct: 425 LISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGK 484
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R ++ +KK SWIE+K+K + F+ G+++HP I L E+++ +++
Sbjct: 485 WDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQK 544
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY +T+ LH V E K+ LL +HSE+LA G++ P IRI+KNLR+CGDCH+
Sbjct: 545 LGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSF 604
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SK R++IVRD +RFHHF++G CSCGD+W
Sbjct: 605 MKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 156/311 (50%), Gaps = 10/311 (3%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
+L + A +++GK H + GL ++ + LINMY+KC V+ + ++F +P +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN++I QNG +E L QM + SS++ ACA L + LH
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
I+ D N+F+A++LLD+YAKCG ++ A C+F+ M +V+W+++ G +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A++LF + + G+K + +V+ AC+ A +I+ N++ G + +++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG--KQVNALLSKSGFCSNIFVASSL 307
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI--FMID 341
D+ + G ++E+Y+ ++ NV W ++S H + EK+ +
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE---KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364
Query: 342 PNNMGAYVILS 352
PN++ +LS
Sbjct: 365 PNDVTFVSVLS 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 142 HVSF-SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
HVSF I+ CA L GK H I+ G ++ ++ L++MY+KCG++ AR +F
Sbjct: 63 HVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVF 122
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
D+M +VSW +I +G ++A+ L QM+++G + +VL AC+
Sbjct: 123 DEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 333/514 (64%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP LVSWNT+I L +NG EAL+++ QM FT+SSVL A + +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +AI+ +D NV + ++L+++YAKC ++D+ +F +P + ++W+S+ AG VQN
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++++ L FR+ +K SS++ ACA L + GKQ++ + ++GF N+F+A
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVA 304
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCG I + +F ++ ++V W A+I G + H + + + LFE+M++ G+
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V FV+VL+AC H GL+ K YF+ MTK++ +AP+ HY+ + D L RAG++ EAY+
Sbjct: 365 PNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYD 424
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
IS + + ++W +LL++CR H N+ELA A+K+F I+P+N G Y++LSN YAA +
Sbjct: 425 LISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGK 484
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R ++ +KK SWIE+K+K + F+ G+++HP I L E+++ +++
Sbjct: 485 WDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQK 544
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY +T+ LH V E K+ LL +HSE+LA G++ P IRI+KNLR+CGDCH+
Sbjct: 545 LGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSF 604
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SK R++IVRD +RFHHF++G CSCGD+W
Sbjct: 605 MKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 156/311 (50%), Gaps = 10/311 (3%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
+L + A +++GK H + GL ++ + LINMY+KC V+ + ++F +P +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN++I QNG +E L QM + SS++ ACA L + LH
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
I+ D N+F+A++LLD+YAKCG ++ A C+F+ M +V+W+++ G +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A++LF + + G+K + +V+ AC+ A +I+ N++ G + +++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG--KQMNALLSKSGFCSNIFVASSL 307
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI--FMID 341
D+ + G ++E+Y+ ++ NV W ++S H + EK+ +
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE---KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364
Query: 342 PNNMGAYVILS 352
PN++ +LS
Sbjct: 365 PNDVTFVSVLS 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 142 HVSF-SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
HVSF I+ CA L GK H I+ G ++ ++ L++MY+KCG++ AR +F
Sbjct: 63 HVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVF 122
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
D+M +VSW +I +G ++A+ L QM+++G + +VL AC+
Sbjct: 123 DEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/510 (40%), Positives = 320/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+++N +I G NG E ++ + R++ + S T+ ++P+ + + + IH
Sbjct: 274 DLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIH 333
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ G+ N + ++ +Y K ++ + LF P K ++WN++I+G QNG +
Sbjct: 334 GFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTE 393
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F++M+ + P V+ ++I+ ACA L +L GK +H I + N++++++L+
Sbjct: 394 TAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALV 453
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI A +FD M + V+W +I G LHG H+A+ L+ +M G P++V
Sbjct: 454 DMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAV 513
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++VL ACSHAGL+ + F++M Y I P EHYA + D+LGR+G+L++A EFI
Sbjct: 514 TFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKK 573
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLL AC +HK+ ++A +E++F +DP ++G YV+LSN Y+ R + A
Sbjct: 574 MPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKA 633
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R ++ + + K+P C+ IEV + FV+GD+SH I L++L +M + GY
Sbjct: 634 ASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQ 693
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+T LHDVEEE+K+ + HSE+LAI FG+I T G IRIIKNLRVC DCHTA KFI
Sbjct: 694 AETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFI 753
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 754 SKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 183/358 (51%), Gaps = 3/358 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V WNT+I GL +N +++++ + R+M ++ DS T+++VLP A+ ++ G
Sbjct: 169 MPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
I A++ G + + LI++Y+KC V + LF + D I++N++I+G N
Sbjct: 229 MGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTAN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + +K FR++L + + + ++P + LHL +HG +++G N ++
Sbjct: 289 GGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVS 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ +Y K I LAR +FD+ +V+W A+I G +G+ AISLF++M K
Sbjct: 349 TAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFT 408
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN+V +L+AC+ G + + + + K + P+ A+ D+ + G + EA++
Sbjct: 409 PNAVTITTILSACAQLGSLSFG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQ 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+M T W T++ +H A K+ ++ + N A LS YA +
Sbjct: 468 LFDSMSEKNTV-TWNTMIFGYGLHGYGHEALKLYNEMLHLG-YNPSAVTFLSVLYACS 523
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 148/265 (55%), Gaps = 4/265 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D+ +N ++ G + N ++++ + N NL PD+FT + + ++ ++
Sbjct: 70 VPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML 129
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+H ++I G +NV +GS+L+++Y K +RV + ++F +P +D + WN++I G V+
Sbjct: 130 ---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVK 186
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N FD+ ++ FR+M+ ++ + ++++PA A L L +G + ++ GF ++
Sbjct: 187 NCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV 246
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ +Y+KCG++ AR +F +++ D++++ A+I G +G ++ LF ++ G
Sbjct: 247 LTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGE 306
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWS 264
+ +S V ++ S G + A S
Sbjct: 307 RVSSSTIVGLIPLHSPFGHLHLACS 331
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +V+WN +I G +NG E A+++ ++M P++ T++++L A + GK
Sbjct: 372 PEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK 431
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H L+ N+ + ++L++MYAKC + ++ +LF + K+ ++WN++I G +G
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHG 491
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL-HGCIIRNGFDDNMFIA 180
E LK + +ML P V+F S++ AC+H + G+++ H + + + +
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY 551
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHD-IVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ ++D+ + G + A KM + W ++ +H + A E++ + +
Sbjct: 552 ACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFE--L 609
Query: 240 KPNSVAFVAVLT 251
P SV + +L+
Sbjct: 610 DPGSVGYYVLLS 621
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 310/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW +I G +G + EAL + R + + L+PDSFTL +L + D+ G
Sbjct: 163 IPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASG 222
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I GY G NV + +SL++MYAKC +E++ R+F + KD + W+++I G N
Sbjct: 223 RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASN 282
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+ E L F +M ++P + + AC+ L L LG G + + F N +
Sbjct: 283 GMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG 342
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D YAKCG++ A+ +F M D V + AVI G A+ G+ A +F QM K G++
Sbjct: 343 TALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ FV +L C+HAGL+D YF+ M+ + + P+ EHY + DL RAG L EA +
Sbjct: 403 PDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQD 462
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M VW LL CR+HK+ +LA V +++ ++P N G YV+LSN Y+A+ R
Sbjct: 463 LIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHR 522
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +A +R + KGM+K P CSW+EV + F+ GD SHP H+I E L+ L + + +
Sbjct: 523 WDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLRE 582
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ VL DVEEE+K+ L HSE+LA+ F +I T IR++KNLRVCGDCH A
Sbjct: 583 AGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEA 642
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +SK+ REIIVRDN+RFHHF +G CSC DYW
Sbjct: 643 IKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 165/308 (53%), Gaps = 8/308 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI---FADYVDVI 58
P ++ +NT+I G+ N + +A+++ M PD+FT VL Y V
Sbjct: 62 PHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHV- 120
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G +H I+ G D +V + + L+ +Y+K + D+ ++F +P K+ +SW +II G +
Sbjct: 121 -GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYI 179
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++G F E L FR +L ++P + I+ AC+ + L G+ + G + +G N+F
Sbjct: 180 ESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVF 239
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+SL+DMYAKCG++ AR +FD M D+V W+A+I G A +G +A+ +F +M+++
Sbjct: 240 VATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQREN 299
Query: 239 VKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
V+P+ A V V +ACS G ++ W+ ++ P A+ D + G + +
Sbjct: 300 VRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG--TALIDFYAKCGSVAQ 357
Query: 298 AYEFISNM 305
A E M
Sbjct: 358 AKEVFKGM 365
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L +LH KQ H ++R G + ++ + LL + A +F + +I + +
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS------HAGL 258
I G + DA+S++ M + G P++ F VL AC+ H GL
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL 122
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 324/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSW T+I G ++ + EAL++ +M P+ +TL++VL + + +G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H ++ ++++ +GSSL++MYAK ++++ R+F LP +D +S +II+G Q
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 222
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L FRQ+ ++ HV+F++++ A + L +L GKQ+H I+R + +
Sbjct: 223 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQ 282
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMY+KCG + +R +FD M +VSW A++MG HG H+ ISLF+ + K+ VK
Sbjct: 283 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VK 341
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV +AVL+ CSH GL+D+ F+++ K+ HY + DLLGR+G+L++A
Sbjct: 342 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 401
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM T ++W +LL ACRVH NV + VA+K+ ++P N G YVILSN YAAA
Sbjct: 402 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 461
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R M K + K P SWI + + F + ++ HP IN +KE+ ++
Sbjct: 462 WKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 521
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VPD VLHDV++EQK+ +L HSE+LAI FG++ TP G TIR++KNLR+C DCH
Sbjct: 522 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNF 581
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ +REI +RD +RFH G C+CGDYW
Sbjct: 582 AKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 135/258 (52%), Gaps = 23/258 (8%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H I V +G+ L+ MY +C ++D+ + +P + +SW ++I+G
Sbjct: 60 EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYS 119
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q E L F +ML A P + ++++ +C+ +++ GKQ+H +++ F+ +MF
Sbjct: 120 QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMF 179
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSLLDMYAK NI+ AR +FD + D+VS TA+I G A G +A+ LF Q+ +G
Sbjct: 180 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 239
Query: 239 VKPNSVAFVAVLTACS-----------HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
++ N V F ++TA S HA ++ K +F ++ ++ D
Sbjct: 240 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN------------SLID 287
Query: 288 LLGRAGKLQEAYEFISNM 305
+ + GKL + NM
Sbjct: 288 MYSKCGKLLYSRRVFDNM 305
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + R + + + AC L G+Q+H +I + +F+ + L+ MY +CG
Sbjct: 33 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR + D+M +VSWT +I G + +A+ LF +M + G PN VLT+
Sbjct: 93 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQEA 298
CS I Y + +FE + +++ D+ ++ +QEA
Sbjct: 153 CSGPQSI-----YQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 197
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/510 (41%), Positives = 315/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVS+N +I G + NG E A+ R++ + S T+ ++P+ + + + I
Sbjct: 269 DLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQ 328
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ G + ++L +Y++ ++ + +LF K +WN++I+G Q+GL +
Sbjct: 329 GFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTE 388
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F++M+ + P V+ +SI+ ACA L L GK +H I + N++++++L+
Sbjct: 389 MAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALI 448
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI A +FD + V+W +I G LHG +A+ LF +M G +P+SV
Sbjct: 449 DMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSV 508
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++VL ACSHAGL+ + F++M Y I P EHYA + D+LGRAG+L++A EFI
Sbjct: 509 TFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRK 568
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLL AC +HK+ LA +E++F +DP N+G YV+LSN Y+ R + A
Sbjct: 569 MPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKA 628
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R ++ + + KTP C+ IEV + FV GD+SH I L+EL +M + GY
Sbjct: 629 ASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQ 688
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+T LHDVEEE+K+ + HSE+LAI FG+I T GT IRIIKNLRVC DCH A KFI
Sbjct: 689 SETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFI 748
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 749 SKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 169/324 (52%), Gaps = 2/324 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V WNT+I GL RN Y++++ + + M ++ DS T+++VLP A+ +V G
Sbjct: 164 MPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVG 223
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
I A++ G + + + LI++++KC V+ + LF ++ D +S+N++I+G N
Sbjct: 224 MGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCN 283
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + +K+FR++L++ + + ++P + LHL + G +++G ++
Sbjct: 284 GETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVS 343
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L +Y++ I LAR +FD+ + +W A+I G A G AISLF++M
Sbjct: 344 TALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFT 403
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V ++L+AC+ G + S + + K + + A+ D+ + G + EA +
Sbjct: 404 PNPVTITSILSACAQLGALSFGKS-VHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQ 462
Query: 301 FISNMHAGPTENVWLTLLSACRVH 324
++ + W T++ +H
Sbjct: 463 LF-DLTSEKNTVTWNTMIFGYGLH 485
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 137/257 (53%), Gaps = 3/257 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+ +N +I G + + + N L PD+FT + + D D + G
Sbjct: 66 VPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPD--DNL-G 122
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +A+ G D+N+ + S+L+++Y K +RV + ++F +P +D + WN++I G V+N
Sbjct: 123 MCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRN 182
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+D+ ++ F+ M+ ++ + ++++PA A + + +G + ++ GF + ++
Sbjct: 183 CCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVL 242
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ +++KC ++ AR +F + D+VS+ A+I G + +G A+ F ++ G +
Sbjct: 243 TGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQR 302
Query: 241 PNSVAFVAVLTACSHAG 257
+S V ++ S G
Sbjct: 303 VSSSTMVGLIPVSSPFG 319
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E H IR+G ++ + L + LF +P D +N +I G
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKG-FSFS 84
Query: 122 LFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ F+ +L + P + +++ + A +LG LH + +GFD N+F+A
Sbjct: 85 PDASSISFYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVA 141
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+D+Y K + AR +FDKM D V W +I G + D++ +F+ M GV+
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 241 PNSVAFVAVLTA 252
+S VL A
Sbjct: 202 LDSTTVATVLPA 213
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 324/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSW T+I G ++ + EAL++ +M P+ +TL++VL + + +G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H ++ ++++ +GSSL++MYAK ++++ R+F LP +D +S +II+G Q
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L FRQ+ ++ HV+F++++ A + L +L GKQ+H I+R + +
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQ 250
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMY+KCG + +R +FD M +VSW A++MG HG H+ ISLF+ + K+ VK
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VK 309
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV +AVL+ CSH GL+D+ F+++ K+ HY + DLLGR+G+L++A
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM T ++W +LL ACRVH NV + VA+K+ ++P N G YVILSN YAAA
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 429
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R M K + K P SWI + + F + ++ HP IN +KE+ ++
Sbjct: 430 WKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 489
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VPD VLHDV++EQK+ +L HSE+LAI FG++ TP G TIR++KNLR+C DCH
Sbjct: 490 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNF 549
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ +REI +RD +RFH G C+CGDYW
Sbjct: 550 AKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 135/258 (52%), Gaps = 23/258 (8%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H I V +G+ L+ MY +C ++D+ + +P + +SW ++I+G
Sbjct: 28 EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYS 87
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q E L F +ML A P + ++++ +C+ +++ GKQ+H +++ F+ +MF
Sbjct: 88 QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMF 147
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSLLDMYAK NI+ AR +FD + D+VS TA+I G A G +A+ LF Q+ +G
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 207
Query: 239 VKPNSVAFVAVLTACS-----------HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
++ N V F ++TA S HA ++ K +F ++ ++ D
Sbjct: 208 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN------------SLID 255
Query: 288 LLGRAGKLQEAYEFISNM 305
+ + GKL + NM
Sbjct: 256 MYSKCGKLLYSRRVFDNM 273
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + R + + + AC L G+Q+H +I + +F+ + L+ MY +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR + D+M +VSWT +I G + +A+ LF +M + G PN VLT+
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQEA 298
CS I Y + +FE + +++ D+ ++ +QEA
Sbjct: 121 CSGPQSI-----YQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 165
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 338/514 (65%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV LVSWNT++ +NG E+AL + QM FT+SSV+ A V +
Sbjct: 108 MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC 167
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG+A++ LD+NV +G++L+++YAKC V+D++ +F +P + ++W+S++AG VQN
Sbjct: 168 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 227
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L++E L F + ++ + SS + ACA L GKQ+ + G N+F+
Sbjct: 228 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVI 287
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCG I A +F ++ ++V W A++ G + H + +A+ FE+M++ G+
Sbjct: 288 SSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGIC 347
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +++VL+ACSH GL++K YF+ M + + ++P+ HY+ + D+LGRAG L EA +
Sbjct: 348 PNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKD 407
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M T ++W +LL++CR+++N+ELA A+ +F I+P+N G +V+LSN YAA R
Sbjct: 408 FIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDR 467
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A R ++ KK SWIE+K+K ++F+ G+++HP I L++L+ M++
Sbjct: 468 WEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKK 527
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY T+ LHDVEE +K+ LL +HSE+LA+ FGI+ P G IRI+KNLR+CGDCH+
Sbjct: 528 IGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSF 587
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K S I +REIIVRD +RFHHF++G CSCG++W
Sbjct: 588 MKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 153/299 (51%), Gaps = 8/299 (2%)
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
I+G H IR GL A+ + L+NMY+KC VE + +LF +PV+ +SWN+++
Sbjct: 64 IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSH 123
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
QNG ++ L F QM + SS++ ACA + KQLHG ++ D N+
Sbjct: 124 TQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV 183
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ ++LLD+YAKCG ++ A +F+ M V+W++++ G + +A+ LF + +
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++ N + L+AC+ + + +++ GI + +++ D+ + G ++E
Sbjct: 244 GLEHNQFTISSALSACAARAALIEG-KQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEE 302
Query: 298 AYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
AY S++ +NV W +LS H A EK+ I PN++ +LS
Sbjct: 303 AYTVFSSV---EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 358
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/512 (42%), Positives = 334/512 (65%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD---YVDVI-KGKEIH 64
+N + L+ G EE LN+ R+M ++ + D FT + VL +V ++ KG+EIH
Sbjct: 139 YNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIH 198
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +RHG D V I ++L++MYAK V ++ +F +PVK+ +SW+++IA +NG
Sbjct: 199 AHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAF 258
Query: 125 EGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR++++ + P V+ S++ ACA L L G+ +HG I+R G D + + S+
Sbjct: 259 EALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISA 318
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MYA+CG + L + +FD+MD D+VSW ++I +HG AI +FE+M +GV+P+
Sbjct: 319 LVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPS 378
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
++FV+VL ACSHAGL+D+ FNSM +GI PS EHYA + DLLGRA +L+EA + I
Sbjct: 379 PISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKII 438
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
NM P VW +LL +CR+H NVELA + + ++F ++P N G YV+L++ YA A W
Sbjct: 439 ENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWD 498
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
++ + +G++K P SWIEVK K Y+FV+ D+ +P +++ L +L +++EG
Sbjct: 499 GVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEG 558
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVP TK VL+D++ +K+ ++ HSE+LA+ FG+I + G IRI K+LR+C DCH+ K
Sbjct: 559 YVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTK 618
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK +EI+VRD +RFHHF DG CSCGDYW
Sbjct: 619 FISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 129/240 (53%), Gaps = 8/240 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQ--MGNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV ++VSW+ +I A+NG EAL + R+ + +L P+S T+ SVL A +
Sbjct: 236 MPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALE 295
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IHGY +R GLD+ + + S+L+ MYA+C ++E R+F + +D +SWNS+I+
Sbjct: 296 QGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYG 355
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNM 177
+G + + F +M ++P +SF S++ AC+H + GK L + + +G ++
Sbjct: 356 VHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSV 415
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDA----ISLFE 232
+ ++D+ + + A I + M + W +++ +H N A I LF+
Sbjct: 416 EHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFD 475
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 161/329 (48%), Gaps = 12/329 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + N +I L + G +AL ++ N P T ++ ++ +
Sbjct: 35 PTASTADNNKLIQSLCKQGNLTQALELLSLEPN----PAQHTYELLILSCTHQNSLLDAQ 90
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H + + +G D + + + LINMY+ ++++ ++F + +N++ G
Sbjct: 91 RVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAG 150
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA----HLTTLHLGKQLHGCIIRNGFDDNM 177
+E L +R+M I +++ ++ AC ++ L+ G+++H I+R+G+D +
Sbjct: 151 HGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYV 210
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ--ME 235
I ++L+DMYAK G + A C+F++M + ++VSW+A+I A +G A +A+ LF + +E
Sbjct: 211 HIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLE 270
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ PNSV V+VL AC+ +++ + + G+ +A+ + R GKL
Sbjct: 271 TQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRK-GLDSILPVISALVTMYARCGKL 329
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVH 324
+ M + W +L+S+ VH
Sbjct: 330 ELGQRVFDQMDKRDVVS-WNSLISSYGVH 357
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
L P N +I + G + L ++L + P ++ ++ +C H +L
Sbjct: 33 LNPTASTADNNKLIQSLCKQGNLTQAL----ELLSLEPNPAQHTYELLILSCTHQNSLLD 88
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
+++H ++ NGFD + F+A+ L++MY+ +I AR +FDK I + A+ +L
Sbjct: 89 AQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSL 148
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
G+ + ++++ +M G+ + + VL AC
Sbjct: 149 AGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKAC 181
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/508 (42%), Positives = 318/508 (62%), Gaps = 2/508 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DLVSWN++I +N AL + M ++PD T+ S+ IF+ D
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRIS 342
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ I G+ IR LD +V IG++L+NMYAK + +H +F LP KD ISWN+++ G Q
Sbjct: 343 RSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQ 402
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NGL E + + M + P ++ SI+PA +H+ L G ++H +I+N ++F
Sbjct: 403 NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVF 462
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ L+D+Y KCG + A +F ++ V W A+I +HG +A+ LF+ M +
Sbjct: 463 VATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER 522
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VK + + FV++L+ACSH+GL+D+ F+ M K+YGI PS +HY + DLLGRAG L++A
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKA 582
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
YE + NM P ++W LLSAC+++ N EL ++++ +D N+G YV+LSN YA
Sbjct: 583 YELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANT 642
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ +R R++G++KTP S + V +KA F G+++HP Y I + LK L +M
Sbjct: 643 EKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKM 702
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD V D+EE++K+ +L HSERLAI FGII TP + IRI KNLRVCGDCH
Sbjct: 703 KSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCH 762
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDG 506
A K+IS+I +REI+VRD++RFHHF+DG
Sbjct: 763 NATKYISRISEREIVVRDSNRFHHFKDG 790
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 183/333 (54%), Gaps = 6/333 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWN +I G +NG AL ++ +M +K D+ T++S+LP+ A DVI G
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH + ++HGLD++V + ++LINMY+K R++D+ +F + V+D +SWNSIIA QN
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
L+FF+ M + I+P ++ S+ + L+ + + + G +IR D ++ I
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KD 237
++L++MYAK G + A +FD++ D +SW ++ G +G A +AI + ME +D
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRD 421
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ PN +V+++ A SH G + + + K+ F + DL G+ G+L++
Sbjct: 422 TI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA-TCLIDLYGKCGRLED 479
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
A + T W ++++ +H E A
Sbjct: 480 AMSLFYEI-PRDTSVPWNAIIASLGIHGRGEEA 511
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 151/255 (59%), Gaps = 7/255 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
++ SWN++I R G Y EA+N V Q+ G +L+PD +T PI V ++ G
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFP---PILKACVSLVDG 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + G + +V + +SL+++Y++ ++ +H++F +PVKD SWN++I+G QN
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G L +M +K ++ +SI+P CA + G +H ++++G D ++F++
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+K G ++ A+ +FD+M++ D+VSW ++I + + A+ F+ M+ G++
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIR 320
Query: 241 PNSVAFVAVLTACSH 255
P+ + V++ + S
Sbjct: 321 PDLLTVVSLTSIFSQ 335
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
+F V+V K++H + G N+ + + LIN+Y + S F + K+ S
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
WNSII+ V+ G + E + Q+ ++P +F I+ AC L GK++H
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVH 144
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
C+ + GF+D++F+A+SL+ +Y++ G + +A +F M + D+ SW A+I G +GNA
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHA-GLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
A+ + +M+ +GVK +++ ++L C+ + +I+ + + + +G+ A
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNA 262
Query: 285 VADLLGRAGKLQEAYEFISNMH 306
+ ++ + G+LQ+A M
Sbjct: 263 LINMYSKFGRLQDAQMVFDQME 284
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/517 (42%), Positives = 321/517 (62%), Gaps = 6/517 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD--YVDVI 58
MPV + VSWN +I G A NG EA+ + +M + ++ + L + Y+D +
Sbjct: 180 MPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEV 239
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSIIAGC 117
+ +H +R GL +NV + ++LI YAKC R + + ++F L K ISWN++I G
Sbjct: 240 R--RVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGF 297
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
QN ++ + F +M + ++P + S++PA A ++ + +HG IR+ D ++
Sbjct: 298 TQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV 357
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++ ++L+DMY+KCG + +AR +FD +++W A+I G HG A+ LFE+M+
Sbjct: 358 YVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGT 417
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G PN F++VL ACSHAGL+D+ YF SM KDYG+ P EHY + DLLGRAGKL E
Sbjct: 418 GSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDE 477
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A+ FI NM P +V+ +L AC++HKNVELA + A+ IF + P +V+L+N YA
Sbjct: 478 AWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYAN 537
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A WKD A +R M KG++KTP S I++KN+ + F +G +H I L +L+E
Sbjct: 538 ASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEE 597
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GYVPDT + HDVE++ K LL HSE+LAI +G+I T GTTI+I KNLRVC DC
Sbjct: 598 IKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDC 656
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A K IS + REII+RD RFHHF+DGKCSCGDYW
Sbjct: 657 HNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 145/257 (56%), Gaps = 3/257 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVN-LKPDSFTLSSVLPIFADYVDVI 58
MP D V+WN V+ G ARNGL A+ +VR G +PDS TL SVLP AD +
Sbjct: 77 MPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+E+H +A+R GLD V + +++++ Y KC VE + +F +PV++++SWN++I G
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG E + F +M+ + S + + AC L L +++H ++R G N+
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256
Query: 179 IASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+ YAKC LA +F+++ + +SW A+I+G + DA LF +M+ +
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316
Query: 238 GVKPNSVAFVAVLTACS 254
V+P+S V+V+ A +
Sbjct: 317 NVRPDSFTLVSVIPAVA 333
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 130/225 (57%), Gaps = 2/225 (0%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P T +++L + A D+ G+ +H GL + ++L NMY KC R D+ R+
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLT 156
F +P +D ++WN+++AG +NGL ++ +M + +P V+ S++PACA
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
LH +++H +R G D+ + +++++LD Y KCG + AR +FD M + + VSW A+I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
G A +GNA +A++LF +M ++GV + +A L AC G +D+
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDE 238
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/509 (41%), Positives = 326/509 (64%), Gaps = 3/509 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G +++ +L+ QM + L PD FT+ S+L + + GKE+HG
Sbjct: 461 SWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLI 520
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR+ L+ + + SL+++Y C + +H LF + K +SWN+++ G +QNG + L
Sbjct: 521 IRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERAL 580
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FRQM++ ++P +S S+ AC+ L +L LG++ HG ++ +DN FIA S++DMY
Sbjct: 581 SLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMY 640
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AK G++ + +F+ + + SW A++MG +HG A +AI LFE+M++ G P+ + F+
Sbjct: 641 AKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFL 700
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS-NMH 306
VLTAC+H+GL+ + +Y + M +G+ P+ +HYA V D+L RAGKL EA + + M
Sbjct: 701 GVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMS 760
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W LLS+CR+HKN+E+ K+A K+F+ +P YV+LSN YA + +W +
Sbjct: 761 EEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRK 820
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER-MEQEGYVP 425
+R M+ ++K CSWIE+ K ++FVAG+ S + I ++L +LER + + GY P
Sbjct: 821 VRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEI-KSLWSVLEREIGKMGYRP 879
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
DT V HD+ EE+K L HSE+LAI +G+I T +GTT+R+ KNLR+C DCH A K IS
Sbjct: 880 DTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLIS 939
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+++REI+VRDN RFHHF++G CSCGDYW
Sbjct: 940 KVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 142/253 (56%), Gaps = 3/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
++VSWNT++ G + G + +++RQM G +L+ D T+ + +P+ + + KE
Sbjct: 354 NVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKE 413
Query: 63 IHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H Y+++ + N + ++ + YAKC + +HR+FC + K SWN++I G Q+
Sbjct: 414 LHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSS 473
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L + QM + + P + S++ AC+ + +L LGK++HG IIRN + + F+
Sbjct: 474 DPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYI 533
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SLL +Y CG + A +FD M+ +VSW ++ G +G A+SLF QM GV+P
Sbjct: 534 SLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQP 593
Query: 242 NSVAFVAVLTACS 254
++ ++V ACS
Sbjct: 594 CEISMMSVFGACS 606
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 208/470 (44%), Gaps = 63/470 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP +LVSWN++I + NGL EE ++ QM + PD TL++VLP+ A +
Sbjct: 245 MPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDRE 304
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ GK +HG A++ LD V + ++L++MY+KC + D+ +F L K+ +SWN+++ G
Sbjct: 305 IGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGG 364
Query: 117 CVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF- 173
G + RQML ++ V+ + +P C + L K+LH ++ F
Sbjct: 365 FSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFV 424
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+N +A++ + YAKCG++ A +F + + SW A+I G + + ++ + Q
Sbjct: 425 HNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQ 484
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M+ G+ P+ ++L+ACS + + ++ SF Y ++ L G
Sbjct: 485 MKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV-YISLLSLYIHCG 543
Query: 294 KLQEAYEFISNMH----------------------------------AGPTENVWLTLLS 319
+L A+ M P E +++
Sbjct: 544 ELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFG 603
Query: 320 ACRVHKNVELAGKV---AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGM 376
AC + ++ L + A K + D + VI + YA K+ + + F G+
Sbjct: 604 ACSLLPSLRLGREAHGYALKCLLEDNAFIACSVI--DMYA-----KNGSVMESFKVFNGL 656
Query: 377 KKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
K+ SW A V G + + R EA+K L E M++ G+ PD
Sbjct: 657 KERSVASW-------NAMVMG---YGIHGRAKEAIK-LFEEMQRTGHCPD 695
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 9/257 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN VI +RN LY L + V+ + L PD+FT V+ A +V G +
Sbjct: 147 NLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAV 206
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG ++ L +V + ++L++ Y V D+ R+F ++P ++ +SWNS+I NGL
Sbjct: 207 HGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLS 266
Query: 124 DEGLKFFRQML-----IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+E QM+ IA P + ++++P CA + +GK +HG ++ D +
Sbjct: 267 EECFLLLGQMMEKDDEIA-FTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV 325
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+DMY+KCG I A+ IF + ++VSW ++ G + G+ H L QM G
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGG 385
Query: 239 --VKPNSVAFVAVLTAC 253
++ + V + + C
Sbjct: 386 GDLRADEVTILNAVPVC 402
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 108/208 (51%), Gaps = 10/208 (4%)
Query: 56 DVIKGKEIH---GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D+ G++IH + R D +C + +I MY+ C +DS +F L K+ WN+
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLC--TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNA 153
Query: 113 IIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I+ +N L+ L+ F +M+ + + P + +F ++ ACA ++ + +G +HG +++
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+++F++++L+ Y G++ A +F M ++VSW ++I + +G + + L
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLL 273
Query: 232 EQ-MEKD---GVKPNSVAFVAVLTACSH 255
Q MEKD P+ VL C+
Sbjct: 274 GQMMEKDDEIAFTPDVATLATVLPVCAR 301
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 319/544 (58%), Gaps = 31/544 (5%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +D+++WN +I + G +EE+ + M + + P + TL VL + D+ GK
Sbjct: 201 PKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGK 260
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS-------------------------- 95
++H Y +++N+ + +++I+MYA C ++ +
Sbjct: 261 KVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 320
Query: 96 -----HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
F +P KD +SW ++I G +++ F E L+ FR M +KP + S++
Sbjct: 321 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 380
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACAHL L LG+ + I RN +++F+ ++L+DMY KCG++ A IF +M D +
Sbjct: 381 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 440
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
WTA+I+G A++G+ A+ +F M K + P+ + ++ VL+AC+H GL+DK YF MT
Sbjct: 441 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 500
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+GI P+ HY + DLL RAG+L+EAYE I NM VW LL+ CRV++ ++A
Sbjct: 501 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 560
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
V ++I ++P+N YV+L N YAA +RW D LR M +KG+KK P CS IE+ +
Sbjct: 561 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGR 620
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ FVAGD+SHP I+ L ++ + ++ GY PD EV D+ EE K+N ++ HSE+L
Sbjct: 621 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKL 680
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG+I +P G TIRI KNLR+C DCH K +SK+ RE+IVRD +RFHHF+ G CSC
Sbjct: 681 AIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSC 740
Query: 511 GDYW 514
DYW
Sbjct: 741 KDYW 744
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 90/442 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L WNT+I G +R + +++ +M +KPD +T + F + + G
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG+ ++HGL NV + ++L+ MY C +++ + +F + P D I+WN II+ +
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E + F M ++ P V+ ++ AC+ L L GK++H + + N+ +
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA---------------- 224
++++DMYA CG + A IF M+ DI+SWT ++ G G
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338
Query: 225 ---------------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL----------- 258
+A+ LF M+ VKP+ V+VLTAC+H G
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398
Query: 259 ------------------------IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA-- 292
+DKA S F M++ + + A ++G A
Sbjct: 399 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-------DKFTWTAMIVGLAVN 451
Query: 293 GKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAEKIFM-------IDP 342
G ++A + SNM P E ++ +LSAC H + G+ K F+ I+P
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSAC-THTGLVDKGR---KYFLRMTSQHGIEP 507
Query: 343 NNMGAYVILSNTYAAARRWKDA 364
N+ Y L + A A R K+A
Sbjct: 508 -NIAHYGCLVDLLARAGRLKEA 528
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 133/252 (52%), Gaps = 4/252 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G R+ ++EAL + R M N+KPD FT+ SVL A + G
Sbjct: 332 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y R+ + ++ + ++LI+MY KC V+ + +F + +D +W ++I G N
Sbjct: 392 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 451
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFI 179
G ++ L F ML A I P +++ ++ AC H + G++ + ++G + N+
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
L+D+ A+ G ++ A + + M + + + W A++ G ++ + A + +Q+ +
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE-- 569
Query: 239 VKPNSVAFVAVL 250
++P++ A +L
Sbjct: 570 LEPDNGAVYVLL 581
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+++H AI+ GL+AN + + ++ + + + RLF +P + WN++I G
Sbjct: 56 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 115
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G+ + +ML +KP +F + L G+QLHG ++++G N+F
Sbjct: 116 RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 175
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MY CG + AR +FD D+++W +I G ++ LF ME
Sbjct: 176 VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 235
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V P +V V VL+ACS + + +S K+ + + A+ D+ G++ A
Sbjct: 236 VLPTTVTLVLVLSACSKLKDL-RTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 294
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+M+ + W T++S +++A +K + + ++ + + Y +
Sbjct: 295 LGIFRSMNNRDIIS-WTTIVSGFTNLGEIDVARNYFDK---MPEKDYVSWTAMIDGYIRS 350
Query: 359 RRWKDAASLRVFMRNKGMK 377
R+K+A L M+ +K
Sbjct: 351 NRFKEALELFRNMQATNVK 369
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/455 (45%), Positives = 299/455 (65%), Gaps = 12/455 (2%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +H +A++ G D +V +GSS+++MYAKC + D+ ++F +P ++ +SW+ +I G Q
Sbjct: 29 GQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQ 88
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E L+ F+Q LI + +FSS++ C + T L LGKQ+HG ++ +D + F+
Sbjct: 89 MGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFV 148
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SSL+ +Y+KCG I A +F ++ + ++ W A+++ A H + A LF+QME G+
Sbjct: 149 GSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGM 208
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + F+ VL ACSHAGL++K YF M K+YGI P +HYA++ DLLGRAGKL++A
Sbjct: 209 KPNFITFLCVLYACSHAGLVEKGQFYFELM-KEYGIEPGAQHYASMVDLLGRAGKLKDAV 267
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M PTE+VW LL+ CR+H + ELA VA+++F + P +AA
Sbjct: 268 SIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGP-----------VSSAAG 316
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+++AA R +R++G+KK SW+E N+ + F AGD+SHP+ I + L+EL E ME
Sbjct: 317 RYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELGEEME 376
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+ DT VL +V+ E+K + YHSERLAI FG+I P IR++KNLRVCGDCHT
Sbjct: 377 RAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCGDCHT 436
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKF+SK R IIVRDN+RFH FEDG CSC DYW
Sbjct: 437 AIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 126/228 (55%), Gaps = 1/228 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G ++ G EEAL + +Q +L + FT SSV+ + + + G
Sbjct: 71 MPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG ++ D++ +GSSLI++Y+KC +ED++ +F +P+++ WN+++ C Q+
Sbjct: 131 KQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQH 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ F+QM +KP ++F ++ AC+H + G+ + G +
Sbjct: 191 AHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHY 250
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDA 227
+S++D+ + G ++ A I KM + S W A++ G +HG+ A
Sbjct: 251 ASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELA 298
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML ++P F S AC L+ +G+ +H ++ G+D ++F+ SS++DMYAKCG
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
I AR +FD+M ++VSW+ +I G + G +A+ LF+Q + + N F +V+
Sbjct: 61 IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
C ++ L++ K + SF + ++ L + G +++AY H P N
Sbjct: 121 CGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLIS-LYSKCGVIEDAYLV---FHEIPIRN 176
Query: 313 V--WLTLLSACRVHKNVELA 330
+ W +L AC H + E A
Sbjct: 177 LGMWNAMLIACAQHAHTEKA 196
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/516 (41%), Positives = 321/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I ++ G +AL++ QM +P+ FT ++VL + G
Sbjct: 119 MPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLG 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + I+ +A+V +GSSL++MYAK ++ ++ +F LP +D +S +II+G Q
Sbjct: 179 RQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQL 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ FR++ ++ +V+++S++ A + L L GKQ+H ++R+ + +
Sbjct: 239 GLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQ 298
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ AR IFD + ++SW A+++G + HG + + LF M +++ V
Sbjct: 299 NSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKV 358
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP+SV +AVL+ CSH GL DK F MT + P +HY V D+LGRAG+++ A
Sbjct: 359 KPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAA 418
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+EF+ M P+ +W LL AC VH N+++ V ++ I+P N G YVILSN YA+A
Sbjct: 419 FEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASA 478
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D SLR M K + K P SWIE+ + F A D SHP ++ ++EL R
Sbjct: 479 GRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARF 538
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYVPD VLHDV+EEQK+ +L HSE+LA+ FG+I TP+ IR+IKNLR+C DCH
Sbjct: 539 KEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCH 598
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ SKI RE+ +RD +RFH GKCSCGDYW
Sbjct: 599 NFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 155/308 (50%), Gaps = 20/308 (6%)
Query: 51 FADYVDVI----------KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC 100
F DY V+ +G+ +H + I+ V + + LI Y KC + D+ +F
Sbjct: 58 FQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFD 117
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
++P ++ +SW ++I+ Q G + L F QML + +P +F++++ +C + L
Sbjct: 118 VMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVL 177
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
G+Q+H II+ ++ ++++ SSLLDMYAK G I AR IF + D+VS TA+I G A
Sbjct: 178 GRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQ 237
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
G +A+ LF +++++G++ N V + +VLTA S +D N + + PS+
Sbjct: 238 LGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSE--VPSYV 295
Query: 281 HYA-AVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF- 338
++ D+ + G L A +H T W +L H G+ ++F
Sbjct: 296 VLQNSLIDMYSKCGNLTYARRIFDTLHE-RTVISWNAMLVGYSKHGE----GREVLELFN 350
Query: 339 -MIDPNNM 345
MID N +
Sbjct: 351 LMIDENKV 358
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/516 (43%), Positives = 318/516 (61%), Gaps = 3/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P +W++VI A+N L AL R+M L PD TL + A +
Sbjct: 68 FPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLA 127
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +++ +V +GSSL++ YAKC V + ++F +P K+ +SW+ +I G Q
Sbjct: 128 LSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQM 187
Query: 121 GLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
GL +E L F++ L I+ + SS++ C+ T LGKQ+HG + FD + F
Sbjct: 188 GLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCF 247
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ASSL+ +Y+KCG + +F+++ + ++ W A+++ A H + LFE+ME+ G
Sbjct: 248 VASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVG 307
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKPN + F+ +L ACSHAGL++K F M K++GI P +HYA + DLLGRAGKL+EA
Sbjct: 308 VKPNFITFLCLLYACSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEA 366
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
I M PTE+VW LL+ CR+H N ELA VA+K+F + + G V+LSN YAAA
Sbjct: 367 VLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAA 426
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW++AA R MR++G+KK SW+E N+ + F AGD+SH I E L+EL E M
Sbjct: 427 GRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEM 486
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYV DT VL +V+ ++K + YHSERLAI FG+I P IR++KNLRVCGDCH
Sbjct: 487 AKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCH 546
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TAIKFISK R IIVRDN+RFH FEDGKC+CGDYW
Sbjct: 547 TAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 151/312 (48%), Gaps = 14/312 (4%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D + VL F + KG ++HG I+ G +A + LIN Y+K S +LF
Sbjct: 6 DCRDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLF 65
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
P K A +W+S+I+ QN L L+FFR+ML + P + + + A L++L
Sbjct: 66 DSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLP 125
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
L LH ++ ++F+ SSL+D YAKCG++ LAR +FD+M ++VSW+ +I G +
Sbjct: 126 LALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYS 185
Query: 220 LHGNAHDAISLFEQ-MEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
G +A++LF++ +E+D ++ N +VL CS + L +
Sbjct: 186 QMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFE-----LGKQVHGLCFKT 240
Query: 278 SFEHYAAVA----DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
SF+ VA L + G ++ Y+ + +W +L AC H + ++
Sbjct: 241 SFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKV-RNLGMWNAMLIACAQHAHTGRTFEL 299
Query: 334 AEKI--FMIDPN 343
E++ + PN
Sbjct: 300 FEEMERVGVKPN 311
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L +WN +I GL + EE L++ R+M + PD +TL SV A V G
Sbjct: 136 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 195
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGY I++GL+ ++ + SSL +MY + +++D + +PV++ ++WN++I G QN
Sbjct: 196 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 255
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L ++ M I+ +P ++F +++ +C+ L G+Q+H I+ G + +
Sbjct: 256 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 315
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
SSL+ MY+KCG + A F + + D V W+++I HG +AI LF M E+ +
Sbjct: 316 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 375
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ N VAF+ +L ACSH+GL DK F+ M + YG P +HY V DLLGRAG L +A
Sbjct: 376 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 435
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M +W TLLSAC +HKN E+A +V ++I IDPN+ YV+L+N +A+A+
Sbjct: 436 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 495
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D + +R MR+K +KK SW E K + + F GD+S I LKEL M+
Sbjct: 496 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 555
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+GY PDT VLHD++EE+K++ L HSE+LA+ F ++ P+G IRIIKNLRVC DCH
Sbjct: 556 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 615
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I REI +RD SRFHHF +GKCSCGDYW
Sbjct: 616 AFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 149/305 (48%), Gaps = 12/305 (3%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRL 98
D F + ++ +++ D ++G + + +N+ LIN Y + + ++ ++
Sbjct: 78 DKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNI-----LINGYVRAGDLVNARKV 132
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F +P + +WN++IAG +Q +EGL FR+M P + S+ A L ++
Sbjct: 133 FDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSV 192
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+G+Q+HG I+ G + ++ + SSL MY + G ++ + M + ++V+W +IMGN
Sbjct: 193 SIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN 252
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
A +G + L++ M+ G +PN + FV VL++CS + + K G +
Sbjct: 253 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSV 311
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH----KNVELAGKVA 334
+++ + + G L +A + S E +W +++SA H + +EL +A
Sbjct: 312 VAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 370
Query: 335 EKIFM 339
E+ M
Sbjct: 371 EQTNM 375
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 43/241 (17%)
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+ IA G E + FR + F+ + +C +L GKQLH ++ +
Sbjct: 18 TAIATLCSKGNLREAFQRFRLNIFTNTSL----FTPFIQSCTTRQSLPSGKQLHCLLVVS 73
Query: 172 GFDDNMFIASSLLDMYAKCG--------------------NIRL-----------ARCIF 200
GF + FI + L+ MY+K G NI + AR +F
Sbjct: 74 GFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVF 133
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D+M + +W A+I G + +SLF +M G P+ +V + AGL
Sbjct: 134 DEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG--SAGLRS 191
Query: 261 KA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
+ + T YG+ +++A + R GKLQ+ I +M P N+ W TL
Sbjct: 192 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM---PVRNLVAWNTL 248
Query: 318 L 318
+
Sbjct: 249 I 249
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/549 (39%), Positives = 325/549 (59%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +VSWN +I G +NGL +AL + R + ++ PD FT++SVL A+ +V
Sbjct: 150 MPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRI 209
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR---------------------- 97
GK++H Y +R + N + ++LI+ YAK VE++ R
Sbjct: 210 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 269
Query: 98 -----------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
+F ++ +D ++W ++I G QNG DE + FR M+ +P + +
Sbjct: 270 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 329
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ CA L L GKQ+H IR+ + + ++++++ MYA+ G+ AR +FD++
Sbjct: 330 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 389
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ ++WT++I+ A HG +A+ LFE+M + GV+P+ + +V VL+ACSHAG +++ Y
Sbjct: 390 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 449
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
++ + ++ IAP HYA + DLL RAG EA EFI M P W +LLSACRVHK
Sbjct: 450 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHK 509
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N ELA AEK+ IDPNN GAY ++N Y+A RW DAA + + K ++K SW
Sbjct: 510 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 569
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+++K + F A D HP + + E ++ G+VPD + VLHDV++E K+ LL
Sbjct: 570 HIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSR 629
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TP+ TT+R++KNLRVC DCH AIK ISK+ REIIVRD +RFHHF D
Sbjct: 630 HSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRD 689
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 690 GLCSCKDYW 698
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 186/423 (43%), Gaps = 76/423 (17%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++VGL R G + EA+ + M P FTL++VL A G
Sbjct: 18 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 77
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
+++H + ++ GL + V + +S++NMY KC E + +F +PV+
Sbjct: 78 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 137
Query: 108 ------------------ISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
+SWN++IAG QNGL + LK F +ML + + P + +S+
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 197
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK------ 202
+ ACA+L + +GKQ+H I+R N + ++L+ YAK G++ AR I D+
Sbjct: 198 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 257
Query: 203 ---------------------------MDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
M+ D+V+WTA+I+G +G +AI LF M
Sbjct: 258 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 317
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD----LLGR 291
G +PNS AVL+ C+ +D + I E ++V++ + R
Sbjct: 318 TCGPEPNSYTLAAVLSVCASLACLD-----YGKQIHCRAIRSLLEQSSSVSNAIITMYAR 372
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYV 349
+G A + W +++ A H E A + E++ ++P+ +
Sbjct: 373 SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 432
Query: 350 ILS 352
+LS
Sbjct: 433 VLS 435
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 7/262 (2%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
M+AK R+ D+ +F +P +DA+SW ++ G + G F E +K M P +
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++++ +CA +G+++H +++ G + +A+S+L+MY KCG+ A +F++M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ + SW A++ N G A SLFE M + V++ A++ + GL KA
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYNQNGLDAKALK 176
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKL---QEAYEFISNMHAGPTENVWLTLLSAC 321
F+ M + +AP +V G + ++ + +I V L+S
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236
Query: 322 RVHKNVELAGKVAEKIFMIDPN 343
+VE A ++ ++ D N
Sbjct: 237 AKSGSVENARRIMDQSMETDLN 258
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/511 (42%), Positives = 322/511 (63%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V + +IVG + GL EAL + M +KP+ +TL+SVL + D++ GK IH
Sbjct: 167 DVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIH 226
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL++ V +SL+ MY+KC VEDS ++F L ++W S I G VQNG +
Sbjct: 227 GLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREE 286
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M+ I P H +FSSI+ AC+ L L G+Q+H ++ G D N ++ ++L+
Sbjct: 287 IALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALI 346
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCGN+ AR +F+ + D+VS +I A +G H+A+ LFE+M+K G KPN V
Sbjct: 347 HLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVV 406
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+++L AC++AGL+++ F+ + ++ I + +HY + DLLGRA + +EA I
Sbjct: 407 TFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE 466
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
P W TLL+AC++H VE+A K +K+ P + G +++L+N YA+A +W +
Sbjct: 467 -GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNV 525
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++ R+ +KKTPA SW+++ + + F+AGD SHP H I+E L EL+E++ GY
Sbjct: 526 IEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYN 585
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICT-PDGTTIRIIKNLRVCGDCHTAIKF 483
PDTK VL D+EEE+K + LYYHSE+LAI F + T T IRI KNLRVCGDCH+ IKF
Sbjct: 586 PDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKF 645
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S + R+II RD RFHHF+ G CSC DYW
Sbjct: 646 VSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 2/214 (0%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV 104
+S++ F + + K +H + ++ G G LI+ Y KC+ + ++ +LF +P
Sbjct: 5 TSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+ ++WNS+I+ V G E ++ + ML + P +FS+I A + + G++
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 165 HGCIIRNGFD-DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
HG + GF+ + F+A+ ++DMYAK G ++ AR +FD++ D+V +TA+I+G G
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGL 183
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+A+ +FE M +KPN +VL +C + G
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++S++ + +L K LH I+++G F L+D Y KC I AR +FD+M
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW- 263
IV+W ++I + G +AI L++ M +GV P++ F A+ A S G+ +
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++ ++ + ++ F + D+ + GK+++A
Sbjct: 123 AHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDA 156
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/541 (41%), Positives = 323/541 (59%), Gaps = 32/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LV +NT++ AR GL EAL I+ +M +PD T+ S + A VD+ GK H
Sbjct: 297 NLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCH 356
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL---------------------- 102
GY IR+GL+ IG+ +I+MY KC + E + R+F L+
Sbjct: 357 GYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVE 416
Query: 103 ---------PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
P ++A+ WN++I+G VQ LF++ ++ FR+M IK V+ I AC
Sbjct: 417 SAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACG 476
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+L L K +H I +NG +M + ++L+DM+A+CG+ + A +F+KM D+ +WTA
Sbjct: 477 YLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTA 536
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
I A+ GN A LF QM GVKP+ V FV VLTACSH G +++ F S+ +D+
Sbjct: 537 AIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDH 595
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI+P EHY + DLLGRAG L+EA++ I +M P + VW +LL+ACRVHKNVE+A
Sbjct: 596 GISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYA 655
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
AE+I + P G +V+LSN YA+A +W D A +R+ +R KG++K P S ++V +
Sbjct: 656 AERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHE 715
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F +GD+SHP I L+E+ R G++PD VL DV+E++K+ LL HSE+LAI
Sbjct: 716 FTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIA 775
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG+I T IR++KNLR+C DCH+ K S I REIIVRDN+RFH F G CSC DY
Sbjct: 776 FGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDY 835
Query: 514 W 514
W
Sbjct: 836 W 836
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 32/336 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G AR +EA+++ +M ++P S T+ V+ A D+ G
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + Y GL N + ++L++MY KC ++ + RLF ++ + +N+I++ +
Sbjct: 252 ERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L +ML +P V+ S + A A L L GK HG +IRNG + I
Sbjct: 312 GLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIG 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG--------------------NAL 220
+ ++DMY KCG +A +FD M +VSW ++ G NA+
Sbjct: 372 NVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAV 431
Query: 221 HGNA-----------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
N DAI LF +M+ +G+K + V + + +AC + G + A + ++
Sbjct: 432 FWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA-KWVHTY 490
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ GI A+ D+ R G Q A + + M
Sbjct: 491 IEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM 526
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 207/427 (48%), Gaps = 25/427 (5%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
L N++I G + GL EA+ + +M + + P+ +T VL +G ++HG
Sbjct: 96 LFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
++ GL+ +V I + LI+ YA+C ++ H++F + ++ +SW S+I G + E
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F +M+ A I+P V+ ++ ACA L L +G+++ I G N + ++L+D
Sbjct: 216 AVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVD 275
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG I A+ +FD+ ++V + ++ A G A +A+++ ++M + G +P+ V
Sbjct: 276 MYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVT 335
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEAYEF 301
++ ++A A L+D ++ + Y I E + ++ D+ + GK + A
Sbjct: 336 MLSAISA--SAQLVDL---FYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACR- 389
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ ++ + T W +L + + +VE A +V + I N + + + +
Sbjct: 390 VFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQ---IPERNAVFWNTMISGLVQKSLF 446
Query: 362 KDAASLRVFMRNKGMKK--------TPACSWI---EVKNKAYAFVAGDKSHPFYHRINEA 410
+DA L M+ +G+K AC ++ E+ + ++ + P R+N A
Sbjct: 447 EDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKN-GIPCDMRLNTA 505
Query: 411 LKELLER 417
L ++ R
Sbjct: 506 LVDMFAR 512
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + V WNT+I GL + L+E+A+ + R+M +K D T+ +
Sbjct: 425 IPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA 484
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y ++G+ ++ + ++L++M+A+C + + ++F + +D +W + I
Sbjct: 485 KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAME 544
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + F QMLI +KP V F ++ AC+H + G + + +G +
Sbjct: 545 GNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHY 604
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+ + G +R A + M + +D+V W +++ +H N A E++ +
Sbjct: 605 GCMVDLLGRAGLLREAFDLIKSMPMEPNDVV-WGSLLAACRVHKNVEMATYAAERINE 661
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/549 (39%), Positives = 325/549 (59%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +VSWN +I G +NGL +AL + R + ++ PD FT++SVL A+ +V
Sbjct: 256 MPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRI 315
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR---------------------- 97
GK++H Y +R + N + ++LI+ YAK VE++ R
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 98 -----------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
+F ++ +D ++W ++I G QNG DE + FR M+ +P + +
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ CA L L GKQ+H IR+ + + ++++++ MYA+ G+ AR +FD++
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 495
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ ++WT++I+ A HG +A+ LFE+M + GV+P+ + +V VL+ACSHAG +++ Y
Sbjct: 496 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 555
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
++ + ++ IAP HYA + DLL RAG EA EFI M P W +LLSACRVHK
Sbjct: 556 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHK 615
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N ELA AEK+ IDPNN GAY ++N Y+A RW DAA + + K ++K SW
Sbjct: 616 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+++K + F A D HP + + E ++ G+VPD + VLHDV++E K+ LL
Sbjct: 676 HIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSR 735
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TP+ TT+R++KNLRVC DCH AIK ISK+ REIIVRD +RFHHF D
Sbjct: 736 HSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRD 795
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 796 GLCSCKDYW 804
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 186/423 (43%), Gaps = 76/423 (17%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++VGL R G + EA+ + M P FTL++VL A G
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
+++H + ++ GL + V + +S++NMY KC E + +F +PV+
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 108 ------------------ISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
+SWN++IAG QNGL + LK F +ML + + P + +S+
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK------ 202
+ ACA+L + +GKQ+H I+R N + ++L+ YAK G++ AR I D+
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 203 ---------------------------MDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
M+ D+V+WTA+I+G +G +AI LF M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD----LLGR 291
G +PNS AVL+ C+ +D + I E ++V++ + R
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLD-----YGKQIHCRAIRSLLEQSSSVSNAIITMYAR 478
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYV 349
+G A + W +++ A H E A + E++ ++P+ +
Sbjct: 479 SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 538
Query: 350 ILS 352
+LS
Sbjct: 539 VLS 541
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV +SL++M+AK R+ D+ +F +P +DA+SW ++ G + G F E +K M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
P + ++++ +CA +G+++H +++ G + +A+S+L+MY KCG+
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F++M + + SW A++ N G A SLFE M + V++ A++ +
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYN 272
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL---QEAYEFISNMHAGPTE 311
GL KA F+ M + +AP +V G + ++ + +I
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 312 NVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
V L+S +VE A ++ ++ D N
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLN 364
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 338/514 (65%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV LVSWNT++ +NG E+AL + QM FT+SSV+ A V +
Sbjct: 81 MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG+A++ LD+NV +G++L+++YAKC V+D++ +F +P + ++W+S++AG VQN
Sbjct: 141 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 200
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L++E L F + ++ + SS + ACA L GKQ+ + G N+F+
Sbjct: 201 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVI 260
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYAKCG I A +F ++ ++V W A++ G + H + +A+ FE+M++ G+
Sbjct: 261 SSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGIC 320
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +++VL+ACSH GL++K YF+ M + + ++P+ HY+ + D+LGRAG L EA +
Sbjct: 321 PNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKD 380
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M T ++W +LL++CR+++N+ELA A+ +F I+P+N G +V+LSN YAA R
Sbjct: 381 FIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDR 440
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ A R ++ KK SWIE+K+K ++F+ G+++HP I L++L+ M++
Sbjct: 441 WEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKK 500
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY T+ LHDVEE +K+ LL +HSE+LA+ FGI+ P G IRI+KNLR+CGDCH+
Sbjct: 501 IGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSF 560
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K S I +REIIVRD +RFHHF++G CSCG++W
Sbjct: 561 MKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 153/299 (51%), Gaps = 8/299 (2%)
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
I+G H IR GL A+ + L+NMY+KC VE + +LF +PV+ +SWN+++
Sbjct: 37 IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSH 96
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
QNG ++ L F QM + SS++ ACA + KQLHG ++ D N+
Sbjct: 97 TQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV 156
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ ++LLD+YAKCG ++ A +F+ M V+W++++ G + +A+ LF + +
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 216
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++ N + L+AC+ + + +++ GI + +++ D+ + G ++E
Sbjct: 217 GLEHNQFTISSALSACAARAALIEG-KQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEE 275
Query: 298 AYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
AY S++ +NV W +LS H A EK+ I PN++ +LS
Sbjct: 276 AYTVFSSV---EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 331
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 321/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW ++I G A+N + EA+ ++ M KP+ FT +S+L Y D G
Sbjct: 112 MRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIG 171
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH A++ +V +GS+L++MYA+C +++ + +F L K+ +SWN++I+G +
Sbjct: 172 GQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARK 231
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +M + H ++SSI A + L GK +H ++++ F+
Sbjct: 232 GDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVG 291
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++LDMYAK G++ AR +F+++ D+V+W +++ A +G +A+S FE+M K G+
Sbjct: 292 NTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIY 351
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F+ +LTACSH GL+ + YF+ M K+Y + P EHY V DLLGRAG L A
Sbjct: 352 LNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALV 410
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL+ACR+HKN ++ A+ +F +DP++ G V+L N YA+
Sbjct: 411 FIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGH 470
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA +R M+ G+KK PACSW+E+ N + FVA D +HP I + E+ ++ +
Sbjct: 471 WDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRK 530
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VL V+E++++ L YHSE++A+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 531 EGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSA 590
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISK+ +REI+VRD +RFHHF +G CSCGDYW
Sbjct: 591 FKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 129/237 (54%)
Query: 26 LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINM 85
L+ + + + L P + + A ++ ++IHG+ + + + +SLI++
Sbjct: 36 LHDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHL 95
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
Y KC V ++H++F + KD +SW S+IAG QN + E + ML + KP +F
Sbjct: 96 YCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S++ A +G Q+H ++ + +++++ S+LLDMYA+CG + +A +FDK+D
Sbjct: 156 ASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ VSW A+I G A G+ A+ +F +M+++G + + ++ + + G +++
Sbjct: 216 KNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQG 272
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L +WN +I GL + EE L++ R+M + PD +TL SV A V G
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGY I++GL+ ++ + SSL +MY + +++D + +PV++ ++WN++I G QN
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L ++ M I+ +P ++F +++ +C+ L G+Q+H I+ G + +
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
SSL+ MY+KCG + A F + + D V W+++I HG +AI LF M E+ +
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 290
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ N VAF+ +L ACSH+GL DK F+ M + YG P +HY V DLLGRAG L +A
Sbjct: 291 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M +W TLLSAC +HKN E+A +V ++I IDPN+ YV+L+N +A+A+
Sbjct: 351 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 410
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D + +R MR+K +KK SW E K + + F GD+S I LKEL M+
Sbjct: 411 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 470
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+GY PDT VLHD++EE+K++ L HSE+LA+ F ++ P+G IRIIKNLRVC DCH
Sbjct: 471 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 530
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I REI +RD SRFHHF +GKCSCGDYW
Sbjct: 531 AFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LIN Y + + ++ ++F +P + +WN++IAG +Q +EGL FR+M P
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+ S+ A L ++ +G+Q+HG I+ G + ++ + SSL MY + G ++ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
M + ++V+W +IMGNA +G + L++ M+ G +PN + FV VL++CS + +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
K G + +++ + + G L +A + S E +W +++SA
Sbjct: 211 GQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAY 268
Query: 322 RVH----KNVELAGKVAEKIFM 339
H + +EL +AE+ M
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNM 290
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L +WN +I GL + EE L++ R+M + PD +TL SV A V G
Sbjct: 49 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 108
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGY I++GL+ ++ + SSL +MY + +++D + +PV++ ++WN++I G QN
Sbjct: 109 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 168
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L ++ M I+ +P ++F +++ +C+ L G+Q+H I+ G + +
Sbjct: 169 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 228
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
SSL+ MY+KCG + A F + + D V W+++I HG +AI LF M E+ +
Sbjct: 229 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 288
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ N VAF+ +L ACSH+GL DK F+ M + YG P +HY V DLLGRAG L +A
Sbjct: 289 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 348
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M +W TLLSAC +HKN E+A +V ++I IDPN+ YV+L+N +A+A+
Sbjct: 349 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 408
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D + +R MR+K +KK SW E K + + F GD+S I LKEL M+
Sbjct: 409 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 468
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+GY PDT VLHD++EE+K++ L HSE+LA+ F ++ P+G IRIIKNLRVC DCH
Sbjct: 469 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 528
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I REI +RD SRFHHF +GKCSCGDYW
Sbjct: 529 AFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LIN Y + + ++ ++F +P + +WN++IAG +Q +EGL FR+M P
Sbjct: 29 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 88
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+ S+ A L ++ +G+Q+HG I+ G + ++ + SSL MY + G ++ +
Sbjct: 89 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 148
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
M + ++V+W +IMGNA +G + L++ M+ G +PN + FV VL++CS + +
Sbjct: 149 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 208
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
K G + +++ + + G L +A + S E +W +++SA
Sbjct: 209 GQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAY 266
Query: 322 RVH----KNVELAGKVAEKIFM 339
H + +EL +AE+ M
Sbjct: 267 GFHGQGDEAIELFNTMAEQTNM 288
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/517 (42%), Positives = 322/517 (62%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ WN +I AR+G +E A+ + R M + ++PD+FT L A +D+ G
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETG 182
Query: 61 KEIHGYAI--RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+E+H + G D VC G L++MYAKC V+D+ +F + V+D++ WNS+IA
Sbjct: 183 REVHERVLGTHWGEDMFVCAG--LVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYG 240
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E L R M + P + S + A A L G++LHG R GFD
Sbjct: 241 QNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAK G +++AR +F+++ ++VSW A+I G +HG+ +A+ LF +M +
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEA 360
Query: 239 -VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
V P+++ FV VL+AC+H G++ +A +F M Y I P+ +H+ + D+LG AG+ +E
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEE 420
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY+ I M P +W LL+ C++HKNVEL +K+ ++P + G YV+LSN YA
Sbjct: 421 AYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQ 480
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+ +W+ AA +R M N+G+KK CSWIE+K K + F+ GD SHP I E L+ L
Sbjct: 481 SGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGL 540
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M GY+PDT V HDV +++K+N++ HSERLAI FG+I TP GT + + KNLRVC DC
Sbjct: 541 MSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDC 600
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H IK IS+IVQREII+RD +R+HHF +G+CSC DYW
Sbjct: 601 HVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Query: 39 PDSFT-LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR 97
P+S+ +SVL + G+++HG + GL + + + L+++YA C V + R
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF +P ++ WN +I ++G + ++ +R M+ ++P + ++ + ACA L
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G+++H ++ + ++MF+ + L+DMYAKCG + AR +FD++ + D V W ++I
Sbjct: 179 LETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAA 238
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+G +A+SL M +GV P V+ ++
Sbjct: 239 YGQNGRPMEALSLCRDMAANGVGPTIATLVSTIS 272
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 309/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I A N L + R+M + +++L + DV G
Sbjct: 297 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIG 356
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + GL + +G++LI+MY+KC ++ + F K AISW ++I G VQN
Sbjct: 357 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 416
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L+ F M A ++P +FSSI+ A + L + LG+QLH +IR+G+ ++F
Sbjct: 417 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG 476
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAKCG + A FD+M + +SW AVI A +G A +AI +FE M G
Sbjct: 477 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F++VL ACSH GL D+ YF+ M Y I+P EHYA V D LGR G + +
Sbjct: 537 PDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 596
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M +W ++L +CR+H N ELA A+K+F ++P + YVILSN YA A +
Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA ++ MR++G++K SW+E+K K Y+F + D + P I + L L + M++
Sbjct: 657 WEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDK 716
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GY PD LH V+ E K L YHSERLAI F ++ TP GT IRI+KNL C DCH
Sbjct: 717 QGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAV 776
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R+IIVRD+ RFHHF+DG CSCGDYW
Sbjct: 777 IKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 6/318 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V++N +++G ++ GL+ +AL + M + FT SS+L + A ++ G ++H
Sbjct: 200 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVH 259
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+R NV + +SL++ Y+KC ++D RLF +P +D +S+N IIA N
Sbjct: 260 ALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAA 319
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ FR+M + + +++++ L +H+GKQ+H ++ G + ++L+
Sbjct: 320 TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALI 379
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG + A+ F +SWTA+I G +G +A+ LF M + G++P+
Sbjct: 380 DMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 439
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +++ A S +I + + + G S + + D+ + G L EA
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDE 498
Query: 305 MHAGPTEN--VWLTLLSA 320
M P N W ++SA
Sbjct: 499 M---PERNSISWNAVISA 513
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + +W ++ A G +AL++ R M + PD T+++VL + V
Sbjct: 101 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----P 155
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H +AI+ GLD +V + ++L++ Y K + + R+F + KDA+++N+++ GC + G
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L + L+ F M A I H +FSSI+ A + L LG Q+H ++R+ N+F+ +
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SLLD Y+KC + R +FD+M D VS+ +I A + A + LF +M+K G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335
Query: 242 NSVAFVAVLT 251
+ + +L+
Sbjct: 336 QVLPYATMLS 345
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+++ Y+ + + LF P ++A +W ++ G + L FR ML + P
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 142 HVSFSSIM--PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
V+ ++++ P C LH I+ G D ++F+ ++LLD Y K G + AR +
Sbjct: 140 RVTVTTVLNLPGCT-------VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
F +M D V++ A++MG + G A+ LF M + G+ F ++LT +
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F + +L Y+ G++ A+ +F + +WT ++ +A G DA+SLF M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 236 KDGVKPNSVAFVAVL 250
+GV P+ V VL
Sbjct: 133 GEGVIPDRVTVTTVL 147
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/526 (42%), Positives = 324/526 (61%), Gaps = 39/526 (7%)
Query: 26 LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINM 85
L +M + L D+FTL VL AD V G+ +HG +R GL+ + +G+SLI+M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV--------------------------- 118
Y KC + D+ +LF + V+D SWN++IAG +
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 119 ----QNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
QNG ++ L F +ML +++KP V+ S++PACA L G+++H G
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISL 230
N + ++L MYAKC ++ ARC FD + + ++++W +I A HG +A+S+
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
FE M + GV+P++V F+ +L+ CSH+GLID ++FN M + + P EHYA V DLLG
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391
Query: 291 RAGKLQEAYEFISNM--HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAY 348
RAG+L EA E IS M AGP+ VW LL+ACR H+N+E+A A ++F+++P+N G Y
Sbjct: 392 RAGRLVEAKELISQMPMQAGPS--VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNY 449
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
V+LSN YA A W++ LR ++ +GMKK+P CSWIE+ K++ F+ DKSHP I
Sbjct: 450 VLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIY 509
Query: 409 EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRII 468
+ L+ L E+++ GY+PDT VLHD+ EE+K+ L HSE+LAI FG++ T G +R+
Sbjct: 510 KFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVT 569
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLR+CGDCH A KFISKI +REIIVRD +RFH F+DG CSCGDYW
Sbjct: 570 KNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 22/233 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
++VSW +I G +NG E+AL + +M +KP+ T+ SVLP A + +G+
Sbjct: 203 NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRR 262
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQN 120
IH +A GL N + ++L MYAKC + ++ F ++ K+ I+WN++I +
Sbjct: 263 IHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASH 322
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F ML A ++P V+F ++ C+H + G N F+D I
Sbjct: 323 GCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG--------LNHFNDMGTIH 374
Query: 181 S---------SLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
S ++D+ + G + A+ + +M + S W A++ H N
Sbjct: 375 SVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRN 427
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/576 (39%), Positives = 338/576 (58%), Gaps = 66/576 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L +N +I GLA N +E +++ M ++++PD TL VL A VDV G+ +H
Sbjct: 102 NLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLH 161
Query: 65 GYAIRHGLDANVCIGSSLINMYAK--------------------------------CARV 92
G ++ GL+ + + SL++MY K C +V
Sbjct: 162 GGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKV 221
Query: 93 EDSHR---LFCLLPVKDAISWNSIIAGCVQNGLFD------------------------- 124
D + LF +P ++A SWNS+I G V+NG D
Sbjct: 222 GDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFS 281
Query: 125 ------EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ L F +ML ++P ++ S + AC + L +G+++H + NGF N
Sbjct: 282 QNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRG 341
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I ++L+DMYAKCGNI+ A +F + D+++W+ +I G A+HG A+ F +M+ G
Sbjct: 342 IGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAG 401
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V F+A+LTACSH+G +D+ ++F SM DY I P+ +HY + DLLGRAG+L EA
Sbjct: 402 INPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEA 461
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
FI +M P +W L ACR HKN+E+A AEK+ ++P + G+YV LSN YAA
Sbjct: 462 LSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAV 521
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D +R M+N+G++K P S+IEV+ + ++FVAGD +H I+ L+E+
Sbjct: 522 GRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASA 581
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+QEGY+P+T VLH++EEE+K++ L HSE+LA+ FG+I T G+TIRI+KNLRVCGDCH
Sbjct: 582 KQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCH 641
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ +K+ SK+ +REII+RD RFHHF+DG CSCGDYW
Sbjct: 642 SMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I G ++NG +E+AL++ +M ++P+ T+ S L + G
Sbjct: 265 MPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVG 324
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH Y +G N IG++L++MYAKC ++ + R+F KD ++W+ +I G +
Sbjct: 325 ERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIH 384
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G FD+ L+ F +M A I P V F +I+ AC+H + G + + + M
Sbjct: 385 GCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKH 444
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ-MEKD 237
+ ++D+ + G + A M ++ D V W A+ H N A E+ ++ +
Sbjct: 445 YTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLE 504
Query: 238 GVKPNSVAFVA 248
P S F++
Sbjct: 505 PKHPGSYVFLS 515
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 21/323 (6%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH H L +N + + LI+ ++ + +F + +N++I G +N
Sbjct: 58 QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F+ + F ML I+P ++ ++ + A L + LG+ LHG +++ G + + F+
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHD----IVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
SL+DMY K G + +FD+ + I+ W +I G G+ A SLFE M +
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER 237
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
N+ ++ +++ G +D+A F M + ++ + + + + G ++
Sbjct: 238 ----NAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVS-----WTTMINGFSQNGDHEK 288
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPN----NMGAYVILS 352
A M LT++SA + A +V E+I + N N G L
Sbjct: 289 ALSMFWRMLEEGVRPNDLTVVSALLACTKIG-ALQVGERIHNYLSSNGFQLNRGIGTALV 347
Query: 353 NTYAAARRWKDAASLRVFMRNKG 375
+ YA K A+ RVF+ KG
Sbjct: 348 DMYAKCGNIKSAS--RVFVETKG 368
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 315/514 (61%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V + +WN +I G A+ EAL++ QM PD+ T ++L D +
Sbjct: 585 LSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWV 644
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H +A GL ++ +G++L++ Y+KC V+ + ++F + ++ +W +I G Q+
Sbjct: 645 KEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQH 703
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + F QML I P ++ SI+ ACA L K++H + G ++ +
Sbjct: 704 GCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVG 763
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MYAKCG+I AR +FD M D+ SWT +I G A HG +A+ F +M+ +G K
Sbjct: 764 NALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFK 823
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++VAVLTACSHAGL+D+ F SMT+DYGI P+ EHY + DLLGRAG L+EA
Sbjct: 824 PNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAEL 883
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P + W LL AC + N+E+A A++ + P + YV+LSN YAA +
Sbjct: 884 FILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGK 943
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ +R M+ KG++K P SWIEV N+ ++FV GD SHP I L +L+ER++
Sbjct: 944 WEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKA 1003
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GYVPDT+ VL + ++E K+ L HSE+LAIV+G++ T IR+ KNLRVC DCHTA
Sbjct: 1004 KGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTA 1063
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI REI+ RD RFHHF+DG CSCGDYW
Sbjct: 1064 TKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 134/255 (52%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W T+I G A G E+A+ + +M +P+ T S+L V++ GK+IH + I
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G ++V + ++L+NMY KC +ED+ +F + ++ ISW +I G G E
Sbjct: 247 QSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 306
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QM P ++ SI+ A A L K++H + G ++ + ++L+ MYA
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 366
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K G+I AR +FD M DI SWT +I G A HG +A SLF QM+++G PN +++
Sbjct: 367 KSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLS 426
Query: 249 VLTACSHAGLIDKAW 263
+L A + A W
Sbjct: 427 ILNASAIASTSALEW 441
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 161/303 (53%), Gaps = 9/303 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +I GLA G +EA ++ QM P+S+T S+L A +
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H +A+ GL ++ +G++L++MYAK ++D+ +F + +D SW +I G Q+
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT--LHLGKQLHGCIIRNGFDDNMF 178
G E F QM P ++ SI+ A A +T L K +H GF ++
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLR 459
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I ++L+ MYAKCG+I AR +FD M D++SW A++ G A +G H+A ++F QM+++G
Sbjct: 460 IGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEG 519
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK---DYGIAPSFEHYAAVADLLGRAGKL 295
+ P+S ++++L +H A + N + K + G+ F +A + R G +
Sbjct: 520 LVPDSTTYLSLLN--THGS--TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSI 575
Query: 296 QEA 298
+A
Sbjct: 576 DDA 578
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 203/432 (46%), Gaps = 60/432 (13%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
DSF+ ++L D++ K++H I+ G++ N+ + + L+ +Y +C R++ + ++F
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVF 176
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
L K+ W ++I G + G ++ ++ + +M +P +++ SI+ AC L
Sbjct: 177 DKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLK 236
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
GK++H II++GF ++ + ++L++MY KCG+I A+ IFDKM +++SWT +I G A
Sbjct: 237 WGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLA 296
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW---------------- 263
+G +A LF QM+++G PNS +V++L A + AG ++ W
Sbjct: 297 HYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE--WVKEVHSHAVNAGLALD 354
Query: 264 -SYFNSMTKDYGIAPSFEHYAAVAD---------------LLGRAGKLQEAYEFISNMHA 307
N++ Y + S + V D L + G+ QEA+ M
Sbjct: 355 LRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQR 414
Query: 308 G---PTENVWLTLLSACRVHKN-----VELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
P +L++L+A + V++ K AE+ I +G +I + YA
Sbjct: 415 NGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALI--HMYAKCG 472
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
DA VF GM SW A + G + H EA L+ M+
Sbjct: 473 SIDDAR--LVF---DGMCDRDVISW-------NAMMGGLAQNGCGH---EAFTVFLQ-MQ 516
Query: 420 QEGYVPDTKEVL 431
QEG VPD+ L
Sbjct: 517 QEGLVPDSTTYL 528
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 135/254 (53%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL--PIFADYVDVI 58
M D+ SW +I GLA++G +EA ++ QM P+ T S+L A +
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K +H +A G +++ IG++LI+MYAKC ++D+ +F + +D ISWN+++ G
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLA 500
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E F QM + P ++ S++ L ++H + G +
Sbjct: 501 QNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFR 560
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+ + MY +CG+I AR +FDK+ + + +W A+I G A +A+SLF QM+++G
Sbjct: 561 VGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREG 620
Query: 239 VKPNSVAFVAVLTA 252
P++ F+ +L+A
Sbjct: 621 FIPDATTFINILSA 634
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/516 (42%), Positives = 318/516 (61%), Gaps = 4/516 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +W++VI A+N L +LN R M + PD S + K
Sbjct: 82 PHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAK 141
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H +A++ ++ +GSS+I+MYAKC + +H +F +P ++ +SW+ +I G VQ G
Sbjct: 142 MLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLG 201
Query: 122 LFDEGLKFFRQMLIAKIKP--RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
DE L+ F++ L+ + + SS++ C T L +G+ +HG + FD + F+
Sbjct: 202 EDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFV 261
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DG 238
ASSL+ +Y+KCG + A +F+++ + ++ W A+++ A H + LF++M+ G
Sbjct: 262 ASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGG 321
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+K N + F+ VL ACSHAGL++K YF M KDYGI P +HY+ + DLLGRAGKL +A
Sbjct: 322 MKANFITFLCVLYACSHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDA 380
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ I M PTE+VW LL+ CR+H N +LA VA+++ + + G +V+LSN YAAA
Sbjct: 381 VKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAA 440
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW++AA R MR++G+KK SW+E N+ + F AGD+SH I + L EL E M
Sbjct: 441 GRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEM 500
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYV DT VL +V+ E+K + YHSERLAI FG I P G IR++KNLRVCGDCH
Sbjct: 501 DKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCH 560
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TAIKFISK R IIVRDN+RFH FEDGKC+CGDYW
Sbjct: 561 TAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 144/303 (47%), Gaps = 21/303 (6%)
Query: 41 SFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC 100
S T S LP KG ++H + I+ GL + LIN Y+K S ++F
Sbjct: 29 SLTFSRSLP---------KGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFH 79
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
P K A +W+S+I+ QN L L +FR ML + P F S +C L++L +
Sbjct: 80 DSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPV 139
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
K LH ++ + ++F+ SS++DMYAKCG+I A +FD+M ++VSW+ +I G
Sbjct: 140 AKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQ 199
Query: 221 HGNAHDAISLFEQ--MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
G +++ LF++ +E++ N +VL C + L+ + S
Sbjct: 200 LGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQ-----MGRLIHGLSFKTS 254
Query: 279 FEHYAAVA----DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
F+ VA L + G ++EAY+ + +W +L AC H + + ++
Sbjct: 255 FDSSCFVASSLISLYSKCGVVEEAYDVFEEVTV-RNLGMWNAMLIACAQHAHTDKTFELF 313
Query: 335 EKI 337
+K+
Sbjct: 314 DKM 316
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 145/279 (51%), Gaps = 6/279 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQ--MGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP ++VSW+ +I G + G +E+L + ++ + N + FTLSSVL + +
Sbjct: 182 MPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQ 241
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+ IHG + + D++ + SSLI++Y+KC VE+++ +F + V++ WN+++ C
Sbjct: 242 MGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACA 301
Query: 119 QNGLFDEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
Q+ D+ + F +M + +K ++F ++ AC+H + GK + G +
Sbjct: 302 QHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGT 361
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEK 236
S+++D+ + G + A + ++M + S W A++ G LHGN A + +++ +
Sbjct: 362 QHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSE 421
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G +S V + A + AG ++A + M +D GI
Sbjct: 422 LG-SVSSGLHVMLSNAYAAAGRWEEA-AKARKMMRDRGI 458
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/549 (39%), Positives = 325/549 (59%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +VSWN +I G +NGL +AL + R + ++ PD FT++SVL A+ +V
Sbjct: 256 MPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRI 315
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR---------------------- 97
GK++H Y +R + N + ++LI+ YAK VE++ R
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 98 -----------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
+F ++ +D ++W ++I G QNG DE + FR M+ +P + +
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ CA L L GKQ+H IR+ + + ++++++ MYA+ G+ AR +FD++
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWR 495
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ ++WT++I+ A HG +A+ LFE+M + GV+P+ + +V VL+ACSHAG +++ Y
Sbjct: 496 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 555
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
++ + ++ IAP HYA + DLL RAG EA EFI M P W +LLSACRVHK
Sbjct: 556 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHK 615
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N ELA AEK+ IDPNN GAY ++N Y+A RW DAA + + K ++K SW
Sbjct: 616 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+++K + F A D HP + + E ++ G+VPD + VLHDV++E K+ LL
Sbjct: 676 HIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSR 735
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TP+ TT+R++KNLRVC DCH AIK ISK+ REIIVRD +RFHHF D
Sbjct: 736 HSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRD 795
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 796 GLCSCKDYW 804
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 186/423 (43%), Gaps = 76/423 (17%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++VGL R G + EA+ + M P FTL++VL A G
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
+++H + ++ GL + V + +S++NMY KC E + +F +PV+
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 108 ------------------ISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSI 148
+SWN++IAG QNGL + LK F +ML + + P + +S+
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK------ 202
+ ACA+L + +GKQ+H I+R N + ++L+ YAK G++ AR I D+
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 203 ---------------------------MDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
M+ D+V+WTA+I+G +G +AI LF M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD----LLGR 291
G +PNS AVL+ C+ +D + I E ++V++ + R
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLD-----YGKQIHCRAIRSLLERSSSVSNAIITMYAR 478
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYV 349
+G A + W +++ A H E A + E++ ++P+ +
Sbjct: 479 SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 538
Query: 350 ILS 352
+LS
Sbjct: 539 VLS 541
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
NV +SL++M+AK R+ D+ +F +P +DA+SW ++ G + G F E +K M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
P + ++++ +CA +G+++H +++ G + +A+S+L+MY KCG+
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F++M + + SW A++ N G A SLFE M + V++ A++ +
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI----VSWNAMIAGYN 272
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL---QEAYEFISNMHAGPTE 311
GL KA F+ M + +AP +V G + ++ + +I
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 312 NVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
V L+S +VE A ++ ++ D N
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLN 364
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 309/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I A N L + R+M + +++L + DV G
Sbjct: 297 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIG 356
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + GL + +G++LI+MY+KC ++ + F K AISW ++I G VQN
Sbjct: 357 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 416
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L+ F M A ++P +FSSI+ A + L + LG+QLH +IR+G+ ++F
Sbjct: 417 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG 476
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAKCG + A FD+M + +SW AVI A +G A +AI +FE M G
Sbjct: 477 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F++VL ACSH GL D+ YF+ M Y I+P EHYA V D LGR G + +
Sbjct: 537 PDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 596
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M +W ++L +CR+H N ELA A+K+F ++P + YVILSN YA A +
Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA ++ MR++G++K SW+E+K K Y+F + D + P I + L L + M++
Sbjct: 657 WEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDK 716
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GY PD LH V+ E K L YHSERLAI F ++ TP GT IRI+KNL C DCH
Sbjct: 717 QGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAV 776
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R+IIVRD+ RFHHF+DG CSCGDYW
Sbjct: 777 IKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 6/318 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V++N +++G ++ GL+ +AL + M + FT SS+L + A ++ G ++H
Sbjct: 200 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVH 259
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+R NV + +SL++ Y+KC ++D RLF +P +D +S+N IIA N
Sbjct: 260 ALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAA 319
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ FR+M + + +++++ L +H+GKQ+H ++ G + ++L+
Sbjct: 320 TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALI 379
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG + A+ F +SWTA+I G +G +A+ LF M + G++P+
Sbjct: 380 DMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 439
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +++ A S +I + + + G S + + D+ + G L EA
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDE 498
Query: 305 MHAGPTEN--VWLTLLSA 320
M P N W ++SA
Sbjct: 499 M---PERNSISWNAVISA 513
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + +W ++ A G +AL++ R M + PD T+++VL + V
Sbjct: 101 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----P 155
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H +AI+ GLD +V + ++L++ Y K + + R+F + KDA+++N+++ GC + G
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L + L+ F M A I H +FSSI+ A + L LG Q+H ++R+ N+F+ +
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SLLD Y+KC + R +FD+M D VS+ +I A + A + LF +M+K G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335
Query: 242 NSVAFVAVLT 251
+ + +L+
Sbjct: 336 QVLPYATMLS 345
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+++ Y+ + + LF P ++A +W ++ G + L FR ML + P
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 142 HVSFSSIM--PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
V+ ++++ P C LH I+ G D ++F+ ++LLD Y K G + AR +
Sbjct: 140 RVTVTTVLNLPGCT-------VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
F +M D V++ A++MG + G A+ LF M + G+ F ++LT
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F + +L Y+ G++ A+ +F + +WT ++ +A G DA+SLF M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 236 KDGVKPNSVAFVAVL 250
+GV P+ V VL
Sbjct: 133 GEGVIPDRVTVTTVL 147
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/514 (40%), Positives = 326/514 (63%), Gaps = 10/514 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI------FADYVDVIKGKE 62
WN + L G EE L + +M + ++ D FT + VL AD++ KGKE
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHL--TKGKE 203
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH + R G +++V I ++L++MYA+ V+ + +F +PV++ +SW+++IA +NG
Sbjct: 204 IHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGK 263
Query: 123 FDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ FR+M+ P V+ S++ ACA L L G+ +HG I+R G D + +
Sbjct: 264 AFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI 323
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ MY +CG + + + +FD+M D+VSW ++I +HG AI +FE+M +G
Sbjct: 324 SALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGAS 383
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P V FV+VL ACSH GL+++ F SM +D+GI P EHYA + DLLGRA +L EA +
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAK 443
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M P VW +LL +CR+H NVELA + + ++F ++P N G YV+L++ YA A+
Sbjct: 444 MVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQM 503
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + ++ + ++G++K P W+EV+ K Y+FV+ D+ +P +I+ L +L E M++
Sbjct: 504 WDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKE 563
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GY+P TK VL+++E E+K+ ++ HSE+LA+ FG+I T G IRI KNLR+C DCH
Sbjct: 564 KGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLF 623
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISK +++EI+VRD +RFH F++G CSCGDYW
Sbjct: 624 TKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 162/338 (47%), Gaps = 12/338 (3%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+S N +I L + G ++AL ++ Q + P T ++ + G +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQESS----PSQQTYELLILCCGHRSSLSDGLRVHRH 102
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ +G D + + + LI MY+ V+ + ++F + WN++ G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPAC--AHLTTLHL--GKQLHGCIIRNGFDDNMFIASS 182
L + +M ++ +++ ++ AC + T HL GK++H + R G++ +++I ++
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTT 222
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVK 240
L+DMYA+ G + A +F+ M + ++VSW+A+I A +G A +A+ F +M E
Sbjct: 223 LVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS 282
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PNSV V+VL AC+ +++ + G+ +A+ + GR GKL
Sbjct: 283 PNSVTMVSVLQACASLAALEQG-RLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQR 341
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
MH + W +L+S+ VH A ++ E++
Sbjct: 342 VFDRMHDRDVVS-WNSLISSYGVHGYGRKAIQIFEEML 378
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 122/231 (52%), Gaps = 4/231 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV ++VSW+ +I A+NG EAL R+M + P+S T+ SVL A +
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALE 302
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IHGY +R GLD+ + + S+L+ MY +C +++ R+F + +D +SWNS+I+
Sbjct: 303 QGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNM 177
+G + ++ F +ML P V+F S++ AC+H + GK+L + R+ G +
Sbjct: 363 VHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQV 422
Query: 178 FIASSLLDMYAKCGNI-RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
+ ++D+ + + A+ + D W +++ +HGN A
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 310/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW +I GLA+NGL +EA+ R+M LK D + SVLP + +GK+IH
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR ++ +GS+LI+MY KC + + +F + K+ +SW +++ G Q G +
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E +K F M + I P H + + ACA++++L G Q HG I +G + +++SL+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I + +F++M++ D VSWTA++ A G A + I LF++M + G+KP+ V
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V++ACS AGL++K YF MT +YGI PS HY+ + DL R+G+L+EA FI+
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLSACR N+E+ AE + +DP++ Y +LS+ YA+ +W
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR K +KK P SWI+ K K ++F A D+S P+ +I L+EL ++ GY
Sbjct: 594 AQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT V HDVEE K +L YHSERLAI FG+I P G IR+ KNLRVC DCH A K I
Sbjct: 654 PDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHI 713
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REI+VRD RFH F+DG CSCGD+W
Sbjct: 714 SSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 179/356 (50%), Gaps = 43/356 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D V+WN +I G + +GL A+ M + + TL ++L + + V
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
GK+IHG I+ G ++ + +GS L+ MYA
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +ED+ +LF + KD++SW ++I G QNGL E ++ FR+M + +K F S+
Sbjct: 218 CGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PAC L ++ GKQ+H CIIR F D++++ S+L+DMY KC + A+ +FD+M ++
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSWTA+++G G A +A+ +F M++ G+ P+ ++AC++ +++ +
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 269 MTKDYGIAPSFEHYAAVAD----LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
I HY V++ L G+ G + ++ + M+ + W ++SA
Sbjct: 397 -----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSA 446
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++VG + G EEA+ I M + PD +TL + A+ + +G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ HG AI GL V + +SL+ +Y KC ++DS RLF + V+DA+SW ++++ Q
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ F +M+ +KP V+ + ++ AC+ + G++ + G ++
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGN 223
S ++D++++ G + A + M D + WT ++ GN
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KI 138
++L+ Y+K + + F LP +D ++WN +I G +GL +K + M+
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
V+ +++ + + LGKQ+HG +I+ GF+ + + S LL MYA G I A+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+F +D + V + +++ G G DA+ LF MEKD SV++ A++ + GL
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKD-----SVSWAAMIKGLAQNGL 250
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+A F M K G+ + +V G G + E +
Sbjct: 251 AKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K +HG IIR F+ ++++ YA + AR +FD++ ++ SW +++ +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 222 GNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
G + S FE++ ++DGV N ++ S +GL+ A +N+M +D+
Sbjct: 86 GLISEMESTFEKLPDRDGVTWN-----VLIEGYSLSGLVGAAVKAYNTMMRDF 133
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 319/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G ++ G +EEAL ++M + + D L S L G
Sbjct: 102 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL-LPVKDAISWNSIIAGCVQ 119
+ +H ++ G ++++ +G++L +MY+K +E + +F + ++ +S+ +I G V+
Sbjct: 162 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 221
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
++GL F ++ I+P +FSS++ ACA+ L G QLH +++ FD++ F+
Sbjct: 222 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 281
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S L+DMY KCG + A FD++ ++W +++ HG DAI +FE+M GV
Sbjct: 282 SSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 341
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN++ F+++LT CSHAGL+++ YF SM K YG+ P EHY+ V DLLGRAG+L+EA
Sbjct: 342 KPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAK 401
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI+ M P W + L ACR+H + E+ AEK+ ++P N GA V+LSN YA R
Sbjct: 402 EFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANER 461
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D S+R+ MR+ +KK P SW++V K + F A D SHP I E L LL++++
Sbjct: 462 QWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIK 521
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T V D+++ K+ LL+ HSER+A+ F +I P G I + KNLRVC DCH+
Sbjct: 522 AAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHS 581
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFISK+ R+IIVRDNSRFHHF DG CSCGDYW
Sbjct: 582 AIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSW +I GL++N + EA+ M P F SS + A + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ G+ + + +GS+L +MY+KC + D+ ++F +P KD +SW ++I G +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L F++M+ ++ S + AC L G+ +H +++ GF+ ++F+
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L DMY+K G++ A +F + ++VS+T +I G +S+F ++ + G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
+PN F +++ AC++ +++ + K ++ P + + D+ G+ G L++A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 298
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MID 341
+ + PTE W +L+S H GK A KIF M+D
Sbjct: 299 IQAFDEI-GDPTEIAWNSLVSVFGQHG----LGKDAIKIFERMVD 338
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/517 (41%), Positives = 317/517 (61%), Gaps = 16/517 (3%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P+ D+ +W ++ G A+NG+ EEA + M + N + + ++++ + + + K
Sbjct: 320 PIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKN----AVSWNAMMAAYVQRRMMEEAK 375
Query: 62 EIHGYAIRHGLDA----NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
E+ DA NV ++++ YA+ ++++ +F ++P KDA+SW +++A
Sbjct: 376 EL--------FDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAY 427
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
Q G +E L+ F++M +F+ ++ CA + L G QLH +I+ G+
Sbjct: 428 SQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGC 487
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ ++LL MY KCG++ A F++M+ D+VSW +I G A HG +A+ +F+ M K
Sbjct: 488 FVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKT 547
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
KP+ + V VL ACSH+GL++K SYF SM +D+G+A EHY + DLLGRAG+L E
Sbjct: 548 STKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDE 607
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + +M P +W LL A R+H+N EL AEKIF ++P N G YV+LSN YA+
Sbjct: 608 AVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYAS 667
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+ +W+D +R M +G+KK P SWIEV+NK + F GD HP I L++L R
Sbjct: 668 SGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIR 727
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M++ GYV T VLHDVEEE+K+++L YHSE+LA+ +GI+ P G IR+IKNLRVC DC
Sbjct: 728 MKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDC 787
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HTA K IS I R II+RD++RFHHF DG CSCGDYW
Sbjct: 788 HTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++ ++ G EE L + ++MG + + VL AD + G
Sbjct: 412 MPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECG 471
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H I+ G +G++L+ MY KC +E++H F + +D +SWN++IAG ++
Sbjct: 472 MQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARH 531
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M KP ++ ++ AC+H + G + R+ G
Sbjct: 532 GFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEH 591
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
+ ++D+ + G + A + M D W A++ + +H N+
Sbjct: 592 YTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSE 638
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 161/342 (47%), Gaps = 32/342 (9%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D VSWN ++ RNG +EA R++ + + D+ + ++++ + + + +
Sbjct: 227 PEKDAVSWNGMLAAYVRNGRIQEA----RELFDSRTEWDAISWNALMAGYVQRSQIEEAQ 282
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++ + +V +++++ YA+ + ++ RLF + P++D +W +I++G QNG
Sbjct: 283 KMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNG 338
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD----DNM 177
+ +E + F M VS++++M A + K+L FD N+
Sbjct: 339 MLEEAKRVFDAM----PDKNAVSWNAMMAAYVQRRMMEEAKEL--------FDAMPCRNV 386
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+++L YA+ G + AR IF M D VSW A++ + G + + + LF++M +
Sbjct: 387 ASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRC 446
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQ 296
G N AF VL+ C+ ++ + + K YG+ F A +A + + G ++
Sbjct: 447 GEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG-CFVGNALLA-MYFKCGSME 504
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
EA+ M + W T+++ H GK A ++F
Sbjct: 505 EAHSAFEEMEERDVVS-WNTMIAGYARHG----FGKEALEVF 541
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++NT++ G A NG +AL+ R + +PDSF+ +++L +
Sbjct: 133 MPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----RPDSFSYNTLLHALGVSSSLADV 188
Query: 61 KEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + ++ + NV I S +A V + F L P KDA+SWN ++A V+
Sbjct: 189 RALFDEMPVKDSVSYNVMISS-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 243
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E R++ ++ + +S++++M + + +++ + + ++
Sbjct: 244 NGRIQEA----RELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR----DVVS 295
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++ YA+ G++ AR +FD + D+ +WTA++ G A +G +A +F+ M
Sbjct: 296 WNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK-- 353
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
N+V++ A++ A ++++A F++M
Sbjct: 354 --NAVSWNAMMAAYVQRRMMEEAKELFDAM 381
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 42/291 (14%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D V + I + + RV D+ RLF +P + ++N+++AG NG + L FFR
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLH-LGKQLHGCIIRNGFDDNMFIASS-----LLDM 186
+ PR SFS + T LH LG +R FD+ M + S ++
Sbjct: 164 I------PRPDSFS-------YNTLLHALGVSSSLADVRALFDE-MPVKDSVSYNVMISS 209
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
+A G + LAR FD D VSW ++ +G +A LF+ + +++++
Sbjct: 210 HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSR----TEWDAISW 265
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
A++ I++A FN M + ++ + + R G + EA
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVS-----WNTMVSGYARRGDMAEARRLFD--- 317
Query: 307 AGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNN------MGAYV 349
P +V W ++S + +E A +V + M D N M AYV
Sbjct: 318 VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDA--MPDKNAVSWNAMMAAYV 366
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/512 (40%), Positives = 324/512 (63%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI-FADYVDV---IKGKEIH 64
WN + L G EE L + +M + ++ D FT + VL A V +KGKEIH
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ R G ++V I ++L++MYA+ V+ + +F +PV++ +SW+++IA +NG
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 125 EGLKFFRQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR+M+ P V+ S++ ACA L L GK +HG I+R G D + + S+
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MY +CG + + + +FD+M D+VSW ++I +HG AI +FE+M +G P
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V FV+VL ACSH GL+++ F +M +D+GI P EHYA + DLLGRA +L EA + +
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV 445
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
+M P VW +LL +CR+H NVELA + + ++F ++P N G YV+L++ YA A+ W
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWD 505
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+ ++ + ++G++K P W+EV+ K Y+FV+ D+ +P +I+ L +L E M+++G
Sbjct: 506 EVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKG 565
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
Y+P TK VL+++E E+K+ ++ HSE+LA+ FG+I T G IRI KNLR+C DCH K
Sbjct: 566 YIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTK 625
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK +++EI+VRD +RFH F++G CSCGDYW
Sbjct: 626 FISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 122/231 (52%), Gaps = 4/231 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV ++VSW+ +I A+NG EAL R+M + P+S T+ SVL A +
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IHGY +R GLD+ + + S+L+ MY +C ++E R+F + +D +SWNS+I+
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNM 177
+G + ++ F +ML P V+F S++ AC+H + GK+L + R+ G +
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 178 FIASSLLDMYAKCGNI-RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
+ ++D+ + + A+ + D W +++ +HGN A
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 160/338 (47%), Gaps = 16/338 (4%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+S N +I L + G ++A+ ++ Q + P T ++ + +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ +G D + + + LI MY+ V+ + ++F + WN++ G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPAC--AHLTTLHL--GKQLHGCIIRNGFDDNMFIASS 182
L + +M ++ +++ ++ AC + T HL GK++H + R G+ +++I ++
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVK 240
L+DMYA+ G + A +F M + ++VSW+A+I A +G A +A+ F +M E
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PNSV V+VL AC+ +++ + G+ +A+ + GR GKL+
Sbjct: 283 PNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
MH + W +L+S+ VH GK A +IF
Sbjct: 342 VFDRMHDRDVVS-WNSLISSYGVHG----YGKKAIQIF 374
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 309/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I A N L + R+M + +++L + DV G
Sbjct: 495 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIG 554
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + GL + +G++LI+MY+KC ++ + F K AISW ++I G VQN
Sbjct: 555 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 614
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L+ F M A ++P +FSSI+ A + L + LG+QLH +IR+G+ ++F
Sbjct: 615 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG 674
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAKCG + A FD+M + +SW AVI A +G A +AI +FE M G
Sbjct: 675 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 734
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F++VL ACSH GL D+ YF+ M Y I+P EHYA V D LGR G + +
Sbjct: 735 PDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 794
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M +W ++L +CR+H N ELA A+K+F ++P + YVILSN YA A +
Sbjct: 795 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 854
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA ++ MR++G++K SW+E+K K Y+F + D + P I + L L + M++
Sbjct: 855 WEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDK 914
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GY PD LH V+ E K L YHSERLAI F ++ TP GT IRI+KNL C DCH
Sbjct: 915 QGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAV 974
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKIV R+IIVRD+ RFHHF+DG CSCGDYW
Sbjct: 975 IKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 22/318 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V++N +++G ++ GL+ +AL + M L + V+
Sbjct: 414 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVL------ 467
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
NV + +SL++ Y+KC ++D RLF +P +D +S+N IIA N
Sbjct: 468 ----------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAA 517
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ FR+M + + +++++ L +H+GKQ+H ++ G + ++L+
Sbjct: 518 TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALI 577
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG + A+ F +SWTA+I G +G +A+ LF M + G++P+
Sbjct: 578 DMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 637
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +++ A S +I + + + G S + + D+ + G L EA
Sbjct: 638 TFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDE 696
Query: 305 MHAGPTEN--VWLTLLSA 320
M P N W ++SA
Sbjct: 697 M---PERNSISWNAVISA 711
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 21/250 (8%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + +W ++ A G +AL++ R M + PD T+++VL + V
Sbjct: 315 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----P 369
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H +AI+ GLD +V + ++L++ Y K + + R+F + KDA+++N+++ GC + G
Sbjct: 370 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 429
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L + L+ F M A RH LHL + H R+ N+F+ +
Sbjct: 430 LHTQALQLFAAMRRAGYS-RH--------------PLHLLQYSHS-RSRSTSVLNVFVNN 473
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SLLD Y+KC + R +FD+M D VS+ +I A + A + LF +M+K G
Sbjct: 474 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 533
Query: 242 NSVAFVAVLT 251
+ + +L+
Sbjct: 534 QVLPYATMLS 543
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+++ Y+ + + LF P ++A +W ++ G + L FR ML + P
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353
Query: 142 HVSFSSI--MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
V+ +++ +P C LH I+ G D ++F+ ++LLD Y K G + AR +
Sbjct: 354 RVTVTTVLNLPGCT-------VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 406
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
F +M D V++ A++MG + G A+ LF M + G
Sbjct: 407 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 445
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F + +L Y+ G++ A+ +F + +WT ++ +A G DA+SLF M
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 346
Query: 236 KDGVKPNSVAFVAVL 250
+GV P+ V VL
Sbjct: 347 GEGVIPDRVTVTTVL 361
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 319/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G ++ G +EEAL ++M + + D L S L G
Sbjct: 167 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL-LPVKDAISWNSIIAGCVQ 119
+ +H ++ G ++++ +G++L +MY+K +E + +F + ++ +S+ +I G V+
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 286
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
++GL F ++ I+P +FSS++ ACA+ L G QLH +++ FD++ F+
Sbjct: 287 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 346
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S L+DMY KCG + A FD++ ++W +++ HG DAI +FE+M GV
Sbjct: 347 SSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 406
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN++ F+++LT CSHAGL+++ YF SM K YG+ P EHY+ V DLLGRAG+L+EA
Sbjct: 407 KPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAK 466
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI+ M P W + L ACR+H + E+ AEK+ ++P N GA V+LSN YA R
Sbjct: 467 EFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANER 526
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D S+R+ MR+ +KK P SW++V K + F A D SHP I E L LL++++
Sbjct: 527 QWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIK 586
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T V D+++ K+ LL+ HSER+A+ F +I P G I + KNLRVC DCH+
Sbjct: 587 AAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHS 646
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFISK+ R+IIVRDNSRFHHF DG CSCGDYW
Sbjct: 647 AIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSW +I GL++N + EA+ M P F SS + A + G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ G+ + + +GS+L +MY+KC + D+ ++F +P KD +SW ++I G +
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L F++M+ ++ S + AC L G+ +H +++ GF+ ++F+
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L DMY+K G++ A +F + ++VS+T +I G +S+F ++ + G+
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
+PN F +++ AC++ +++ + K ++ P + + D+ G+ G L++A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 363
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MID 341
+ + PTE W +L+S H GK A KIF M+D
Sbjct: 364 IQAFDEI-GDPTEIAWNSLVSVFGQHG----LGKDAIKIFERMVD 403
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 1/259 (0%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D+ L+ V+ +A + +GK++H I G + + L+NMY+KC ++ + +LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+P ++ +SW ++I+G QN F E ++ F M I P +FSS + ACA L ++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+GKQ+H ++ G +F+ S+L DMY+KCG + A +F++M D VSWTA+I G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
G +A+ F++M + V + + L AC S +S+ K G
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK-LGFESDI 242
Query: 280 EHYAAVADLLGRAGKLQEA 298
A+ D+ +AG ++ A
Sbjct: 243 FVGNALTDMYSKAGDMESA 261
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/509 (40%), Positives = 315/509 (61%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
L SWN +I G A++ +L+ QM N L PD+FT+ S+L + + GKE+HG
Sbjct: 445 LNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHG 504
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ IR+ L+ ++ + S++++Y C + LF + +SWN++I G +QNG +
Sbjct: 505 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPER 564
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L FRQM++ I+P +S ++ AC+ L +L LG++ H +++ +DN FIA S++D
Sbjct: 565 ALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIID 624
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAK G I + +F+ + SW A+IMG +HG A +AI LFE+M++ G P+ +
Sbjct: 625 MYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLT 684
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ VLTAC+H+GL+ + Y + M +G+ P+ +HYA V D+LGRAG+L A + M
Sbjct: 685 FLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEM 744
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +W +LLS CR+H+N+E+ KVA K+F+++P YV+LSN YA +W D
Sbjct: 745 SEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVR 804
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R M+ ++K CSWIE+ K ++FV G++ + I L ++ + GY P
Sbjct: 805 QVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRP 864
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
DT V HD+ EE+K L HSE+LAI +G+I T +GTT+R+ KNLR+C DCH A K IS
Sbjct: 865 DTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLIS 924
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+++REI+VRDN RFHHF G CSCGDYW
Sbjct: 925 KVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 15/252 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN VI +RN LY E L + ++ + +L PD+FT V+ A DV G +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG ++ GL ++ +G++L++ Y V D+ +LF ++P ++ +SWNS+I NG
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG-- 267
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
D+G P + +++P CA + +GK +HG ++ D + + ++L
Sbjct: 268 DDG----------AFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNAL 317
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKP 241
+DMY+K G I ++ IF + ++VSW ++ G + G+ H L QM + VK
Sbjct: 318 MDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKA 377
Query: 242 NSVAFVAVLTAC 253
+ V + + C
Sbjct: 378 DEVTILNAVPVC 389
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 14/256 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWN++I + NG + PD T+ +VLP+ A ++ G
Sbjct: 248 MPERNLVSWNSMIRVFSDNG------------DDGAFMPDVATVVTVLPVCAREREIGVG 295
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG+A++ LD + + ++L++MY+K + DS +F L K+ +SWN+++ G
Sbjct: 296 KGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAE 355
Query: 121 GLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G RQML +K V+ + +P C + L K+LH ++ F +
Sbjct: 356 GDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDEL 415
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A++ + YAKCG++ A+ +F + + SW A+I G A + ++ QM+ G
Sbjct: 416 LANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSG 475
Query: 239 VKPNSVAFVAVLTACS 254
+ P++ ++L+ACS
Sbjct: 476 LLPDNFTVCSLLSACS 491
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + LVSWNTVI G +NG E AL + RQM ++P ++ +V + + G
Sbjct: 541 MEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG 600
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E H YA++H L+ N I S+I+MYAK + S ++F L K A SWN++I G +
Sbjct: 601 REAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMH 660
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
G E +K F +M P ++F ++ AC H LH G + L G N+
Sbjct: 661 GRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKH 720
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKMDLHDIVSWTAVIMGNALHGN 223
+ ++DM + G + A R + + D+ W +++ +H N
Sbjct: 721 YACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQN 765
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 56 DVIKGKEIH---GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D+ G++IH + R D +C + +I MYA C +DS F L K+ WN+
Sbjct: 99 DIEMGRKIHHLVSGSTRLRSDDVLC--TRIITMYAMCGSPDDSRSAFDALRSKNLFQWNA 156
Query: 113 IIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I+ +N L+ E L+ F +M+ + P + +F ++ ACA ++ + +G +HG +++
Sbjct: 157 VISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKT 216
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +++F+ ++L+ Y G + A +FD M ++VSW ++ I +F
Sbjct: 217 GLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSM-------------IRVF 263
Query: 232 EQMEKDGV-KPNSVAFVAVLTACS 254
DG P+ V VL C+
Sbjct: 264 SDNGDDGAFMPDVATVVTVLPVCA 287
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 324/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++V+WN ++ G + +G EEA+++ M L D +T+ S++P + G
Sbjct: 183 MSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG+ IR G + + I ++L+++Y V+D+HR+F + VKD +W ++ G
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSG 302
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+D +K F +ML I +K ++ I+ +C+H L G+++H I+ F +N+F+
Sbjct: 303 RHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFV 362
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+++DMYA CGN+ A+ F M D+V W A+I GN ++G DAI LF QM+ G+
Sbjct: 363 GSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGL 422
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ FV+VL ACSHAG++ + F M K + P+ +HYA V D+LGRAG+L AY
Sbjct: 423 DPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAY 482
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI+NM P +V+ TLL ACR+H N++L ++++KIF ++PN+ G YV+LSN YA A
Sbjct: 483 SFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAG 542
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W+ R +R+K MKK P S IE+ + Y F+AG+K HP Y +I LK L+ +++
Sbjct: 543 NWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIK 602
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP+T +L DV ++ KK++LY+HSE++AI FG++ T T IRI KNLR C DCHT
Sbjct: 603 KAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHT 662
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KF+SK+ R ++++D +RFH F+DG CSC DYW
Sbjct: 663 ASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++VSW +I GLA+N + EA+++ R+M N KP++ T+SSVLP FA+ + K
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H + +R G + NV + ++L++MY+K + + +LF + ++ ++WN+I++G +G
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHG 202
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E + F M + + S++PA + L +G +HG IIR G++++ I +
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVK 240
+L+D+Y + A +F +M + D+ +WT ++ G + + AI F +M +K
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+S+A + +L++CSH+G + + +++ A + +AV D+ G L++A
Sbjct: 323 LDSIALMGILSSCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKR 381
Query: 301 FISNM 305
F M
Sbjct: 382 FFYGM 386
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 117/197 (59%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I GL N + +SL+N Y C + D+ ++F P K+ +SW +I+G +N
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E + FR+M++ KP V+ SS++PA A+L + + K +H +R GF+ N+F+
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+K G + +AR +F+ M ++V+W A++ G + HG + +AI LF M + G+
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220
Query: 241 PNSVAFVAVLTACSHAG 257
+ ++++ A G
Sbjct: 221 VDFYTIMSLIPASLSVG 237
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/514 (40%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN +I A+NG ++L++ M + + PD FT+ S+L A + G
Sbjct: 462 MEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCG 521
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG+ +R+GL+ + IG SL+++Y +C+ + +F + K + WN +I G QN
Sbjct: 522 KEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQN 581
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L E L FRQML IKP+ ++ + ++ AC+ ++ L LGK++H ++ ++ F+
Sbjct: 582 ELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVT 641
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+L+DMYAKCG + ++ IFD+++ D W +I G +HG+ AI LFE M+ G +
Sbjct: 642 CALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGR 701
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S F+ VL AC+HAGL+ + Y M YG+ P EHYA V D+LGRAG+L EA +
Sbjct: 702 PDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALK 761
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P +W +LLS+CR + ++E+ +V++K+ ++PN YV+LSN YA +
Sbjct: 762 LVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGK 821
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + +R M+ G+ K CSWIE+ Y F+ D S +I + +L +++ +
Sbjct: 822 WDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISK 881
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PDT VLH++EEE K +L HSE+LAI FG++ T GTT+R+ KNLR+C DCH A
Sbjct: 882 IGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNA 941
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +SK+V+R+IIVRDN RFHHF++G C+CGD+W
Sbjct: 942 IKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 169/321 (52%), Gaps = 3/321 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++VSWNT+I G ++ G + ++++M ++ + T+ +VLP + ++ KEI
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HGYA RHG + + ++ + YAKC+ ++ + R+FC + K SWN++I QNG
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L F M+ + + P + S++ ACA L L GK++HG ++RNG + + FI SL
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISL 543
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ +Y +C ++ L + IFDKM+ +V W +I G + + +A+ F QM G+KP
Sbjct: 544 MSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQE 603
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+A VL ACS + + K + +F A+ D+ + G ++++
Sbjct: 604 IAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFV-TCALIDMYAKCGCMEQSQNIFD 662
Query: 304 NMHAGPTENVWLTLLSACRVH 324
++ E VW +++ +H
Sbjct: 663 RVNE-KDEAVWNVIIAGYGIH 682
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 182/339 (53%), Gaps = 23/339 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
DL +N ++ G +RN L+ +A+++ ++ +L PD+FTL V A DV G+ +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A++ G ++ +G++LI MY KC VE + ++F + ++ +SWNS++ C +NG F
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 124 DEGLKFFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E F+++LI++ + P + +++PACA + + +G +HG + G + + +
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGV 239
+SL+DMY+KCG + AR +FD ++VSW +I G + G+ L ++M++ + V
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397
Query: 240 KPNSVAFVAVLTACS--HAGLIDK---AWSYFNSMTKDYGIAPSF-EHYAAVADL----- 288
+ N V + VL ACS H L K +++ + KD +A +F YA + L
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAER 457
Query: 289 --LGRAGKLQEAYEFISNMHA-----GPTENVWLTLLSA 320
G GK ++ + HA G + +++L ++ +
Sbjct: 458 VFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDS 496
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 148 IMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
++ AC H +H+G+++H + + +++ +++ ++ MY+ CG+ +R +FD
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 207 DIVSWTAVIMGNALHGNAHDAISLF-EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+ + A++ G + + DAISLF E + + P++ V AC+ ++ +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
K G + +F A +A + G+ G ++ A + M N+ W +++ AC
Sbjct: 218 HALALKAGGFSDAFVGNALIA-MYGKCGFVESAVKVFETMR---NRNLVSWNSVMYAC 271
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 315/514 (61%), Gaps = 38/514 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+WN +I G + GL ++A+ ++ QM + P+S T+ VLP
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP----------- 218
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
C + + ++F ++ V++ +SW+++I G V +
Sbjct: 219 ---------------------------TCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 251
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FR M ++ I P + ++PAC+HL L G HG +I GF + I
Sbjct: 252 DCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC 311
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+KCG I AR +F++MD HDIVSW A+I+G +HG +A+ LF + G+K
Sbjct: 312 NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLK 371
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L++CSH+GL+ + +F++M++D+ I P EH + D+LGRAG + EA+
Sbjct: 372 PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHH 431
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P +W LLSACR+HKN+EL +V++KI + P + G +V+LSN Y+AA R
Sbjct: 432 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 491
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R+ ++ G+KK P CSWIE+ +AFV GD+SH +IN L+ELL M++
Sbjct: 492 WDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKR 551
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY + V DVEEE+K+ +L YHSE+LAI FGI+ G I + KNLRVCGDCHTA
Sbjct: 552 LGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTA 611
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKF++ I +REI VRD +RFHHF++G C+CGD+W
Sbjct: 612 IKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 39/305 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN +I A NG ++ A+++ M ++ ++P+ +T VL + + + G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
EIH +A GL+++V + ++L++ YAKC + ++ RLF + +D ++WN++IAGC
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL D+ ++ QM I P + ++P C C++
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ-------------CLL----------- 224
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
AR IFD M + + VSW+A+I G +A+ +F M+ G+
Sbjct: 225 --------------YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGID 270
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + VL ACSH + + + G A A+ D+ + GK+ A E
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFARE 329
Query: 301 FISNM 305
+ M
Sbjct: 330 VFNRM 334
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 108/198 (54%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ + K+IH + +++ +A+ + L +Y C +V + RLF +P I WN II
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRA 83
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
NG FD + + ML ++P ++ ++ AC+ L + G ++H G + +
Sbjct: 84 YAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESD 143
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ ++L+D YAKCG + A+ +F M D+V+W A+I G +L+G DA+ L QM++
Sbjct: 144 VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE 203
Query: 237 DGVKPNSVAFVAVLTACS 254
+G+ PNS V VL C
Sbjct: 204 EGICPNSSTIVGVLPTCQ 221
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ AC +L K++H ++N + + + L +Y C + LAR +FD++
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++ W +I A +G AI L+ M GV+PN + VL ACS I+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-IH 132
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
S K +G+ A+ D + G L EA S+M W +++ C ++
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV-AWNAMIAGCSLY 188
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 317/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++I G ++ EEAL ++M + + PD+ L+S A + +G +IH
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIH 470
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ I ++L+N+YA+C R E++ LF + KD I+WN +I+G Q+ L+
Sbjct: 471 ARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYK 530
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L F +M A K +F S + A A+L + GKQ+HG ++ G +A++L+
Sbjct: 531 QALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALI 590
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A+ IF +M L + VSW +I + HG +A+ LF+QM+++G+KPN V
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDV 650
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL ACSH GL+++ SYF SM+ YG+ P +HYA V D+LGRAG+L A F+
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDE 710
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M +W TLLSAC+VHKN+E+ A+ + ++P++ +YV+LSN YA +W +
Sbjct: 711 MPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANR 770
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M+++G++K P SWIEVKN +AF GD+ HP +I + L EL +R+ + GY
Sbjct: 771 DQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYK 830
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+ + H+ E+EQK + HSE+LA+ FG++ P +R+IKNLRVC DCH+ +K
Sbjct: 831 QENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCT 890
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S++ +REI++RD RFHHF G CSCGDYW
Sbjct: 891 SEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 166/325 (51%), Gaps = 12/325 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V++NT+I G A+ G E AL I +M L+PD T++S+L A D+ KG
Sbjct: 205 MLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKG 264
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y ++ G+ + SL+++Y KC +E +H +F L + + WN ++ Q
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + F QM I P ++ I+ C + LG+Q+H I+NGF+ +M+++
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+K G + AR I + ++ D+VSWT++I G H +A++ F++M+ GV
Sbjct: 385 GVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444
Query: 241 PNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
P+++ + +AC+ GL A Y + D I + + +L R G+
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI------WNTLVNLYARCGRS 498
Query: 296 QEAYEFISNMHAGPTENVWLTLLSA 320
+EA+ + E W L+S
Sbjct: 499 EEAFSLFREIEH-KDEITWNGLISG 522
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 149/298 (50%), Gaps = 1/298 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW ++ G A++GL +EA + QM + P + LSSVL +G+ IH
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ + +G++LI +Y + + R+FC + D +++N++I+G Q G +
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ F +M ++ ++P V+ +S++ ACA + L GKQLH +++ G + SLL
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y KCG+I A IF+ D ++V W +++ + + +F QM+ G+ PN
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQF 347
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
+ +L C+ G I+ +S++ G + D+ + G L +A + +
Sbjct: 348 TYPCILRTCTCTGQIELG-EQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKIL 404
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 162/321 (50%), Gaps = 2/321 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++V WN ++V + ++ I QM + P+ FT +L + G++I
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI 368
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H +I++G ++++ + LI+MY+K ++ + ++ +L +D +SW S+IAG VQ+
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L F++M + P ++ +S ACA + + G Q+H + +G+ ++ I ++L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+++YA+CG A +F +++ D ++W +I G A+ +F +M + G K N
Sbjct: 489 VNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNV 548
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
F++ ++A ++ I + K G E A+ L G+ G +++A S
Sbjct: 549 FTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFS 607
Query: 304 NMHAGPTENVWLTLLSACRVH 324
M E W T++++C H
Sbjct: 608 EMSL-RNEVSWNTIITSCSQH 627
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 149/294 (50%), Gaps = 8/294 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
EIH ++ GL A+ IG+ LI++YAK V + ++F L +D +SW ++++G Q+G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L E + + QM + P SS++ AC G+ +H + + F F+ +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ +Y G+ +LA +F M D V++ +I G+A G+ A+ +F++M+ G++P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V ++L AC+ G + K + + K G++ + ++ DL + G ++ A++
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHD- 301
Query: 302 ISNMHAGPTENVWLTLLSA----CRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
I N+ +W +L A + K+ E+ G++ + I PN IL
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM--QATGIHPNQFTYPCIL 353
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + + VSWNT+I +++G EAL++ QM LKP+ T VL + V +G
Sbjct: 609 MSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 668
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ +GL+ + ++++ + +++ + R +P+ +A+ W ++++ C
Sbjct: 669 LSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/510 (42%), Positives = 317/510 (62%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VS+N +I G A N L + R+M +++ + +S+L + + GK+IH
Sbjct: 305 DNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIH 364
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ GL + +G++LI+MY+KC ++ + F K +SW ++I GCVQNG +
Sbjct: 365 AQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQE 424
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F M A + P +FSS + A ++L + LG+QLH +IR+G ++F S+LL
Sbjct: 425 EALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALL 484
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG + A FD+M + +SW AVI A +G A +AI +FE M G KP+SV
Sbjct: 485 DMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSV 544
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++VL+ACSH GL ++ YF M +YGI+P EHY+ V D LGR G+ + E +
Sbjct: 545 TFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGE 604
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M +W ++L +CR H N +LA AEK+F + + YVILSN +A A +W+DA
Sbjct: 605 MPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDA 664
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A ++ MR++G++K SW+EVK+K Y+F + D+++P I + L+ L + M+++GY
Sbjct: 665 AGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYK 724
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT L V+++ K L YHSERLAI F +I TP GT IR++KNL C DCH+AIK +
Sbjct: 725 PDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMM 784
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV R+IIVRD+SRFHHF+DG CSCGDYW
Sbjct: 785 SKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 179/356 (50%), Gaps = 9/356 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V++N +++G ++ G + EAL++ M L FT S+VL + D+ G
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG R +NV + +SL++ Y+KC +++ +LF + +D +S+N +IAG N
Sbjct: 261 RQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWN 319
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ FR+M + + ++S++ + + +GKQ+H ++ G +
Sbjct: 320 RCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVG 379
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+KCG + A+ F + VSWTA+I G +G +A+ LF M + G+
Sbjct: 380 NALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLS 439
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F + + A S+ +I + + + ++ F +A+ D+ + G L EA +
Sbjct: 440 PDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSG-SALLDMYTKCGCLDEALQ 498
Query: 301 FISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
M P N W ++SA + + A K+ E + + P+++ +LS
Sbjct: 499 TFDEM---PERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLS 551
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 133/256 (51%), Gaps = 9/256 (3%)
Query: 3 VSDLVSWNTVIVGL---ARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL---PIFADYVD 56
+ D V+W TV++G A +A+++ R M + PD T+++VL P
Sbjct: 96 LRDAVTW-TVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAA 154
Query: 57 VIKGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
I +H +A++ GL +NV + ++L++ Y K + + R+F +P +D++++N+++
Sbjct: 155 AIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMM 214
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
GC + G E L F M + +FS+++ + L LG+Q+HG + R
Sbjct: 215 GCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSS 273
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F+ +SLLD Y+KC + + +F +M D VS+ +I G A + A + LF +M+
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQ 333
Query: 236 KDGVKPNSVAFVAVLT 251
++ + ++L+
Sbjct: 334 SLSFDRQALPYASLLS 349
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD---YVDV 57
MP + +SWN VI A G + A+ + M KPDS T SVL + +
Sbjct: 503 MPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEEC 562
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAG 116
+K E+ Y +G+ S +I+ + R + + +P + D I W+SI+
Sbjct: 563 MKYFELMEY--EYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHS 620
Query: 117 CVQNG 121
C +G
Sbjct: 621 CRTHG 625
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 323/515 (62%), Gaps = 8/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+VSWNT++ GL+++G EEA + M N S + ++++ FA D+
Sbjct: 155 MPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRN----SVSWNAMVSGFACSRDMSAA 210
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E A G + + +++++ Y V + F +PV++ +SWN+++AG V+N
Sbjct: 211 EEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKN 267
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
D+ L+ FR M+ A ++P + SS++ C++L+ L GKQ+H ++ N+ +
Sbjct: 268 SHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTV 327
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MY KCG++ A +F +M D+V+W A+I G A HG+ +AI+LFE+M+ +GV
Sbjct: 328 GTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGV 387
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + FVAVLTAC H GL D F M + YGI P +HY+ + DLL RAGKL+ A
Sbjct: 388 EPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAV 447
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P + + TLL+ACRV+KN+E A A K+ DP + GAYV L+N YA A
Sbjct: 448 DLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGAN 507
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W D + +R +M++ + KTP SWIE+K + F + D+ HP + I+E L +L ERM+
Sbjct: 508 QWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMK 567
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD VLHDV+E K +L HSE+LAI FG+I T G T+RI KNLRVCGDCH
Sbjct: 568 AMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHN 627
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI REII+RD +RFHHF G CSCGDYW
Sbjct: 628 AAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 133/284 (46%), Gaps = 28/284 (9%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++L++ + + + RLF +PV+D +SWN++++G ++G +E F M +
Sbjct: 133 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRN-- 190
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARC 198
VS+++++ A + ++ RN + + + ++++ Y GN+ A
Sbjct: 191 --SVSWNAMVSGFACSRDMSAAEEW----FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIE 244
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAG 257
F+ M + ++VSW AV+ G + +A DA+ LF M ++ V+PN+ +VL CS+
Sbjct: 245 YFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLS 304
Query: 258 LID-----KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
+ W ++++ + S + + + G L A + MH T +
Sbjct: 305 ALGFGKQIHQWCMKLPLSRNLTVGTS------LVSMYCKCGDLSSACKLFGEMH---TRD 355
Query: 313 V--WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
V W ++S H + + A + E++ ++PN + +L+
Sbjct: 356 VVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 399
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 316/515 (61%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SW T+I G A+N + EA+N+ R++ + D + SVL +
Sbjct: 410 MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIHGY + L A++ + ++++N+Y + ++ + R F + KD +SW S+I CV N
Sbjct: 470 REIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHN 528
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F + I+P ++ S + A A+L++L GK++HG +IR GF IA
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYA CG + +R +F + D++ WT++I N +HG + AI+LF++M V
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVI 648
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+A+L ACSH+GL+ + +F M Y + P EHYA + DLL R+ L+EAY
Sbjct: 649 PDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYH 708
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ NM P+ +W LL AC +H N EL A+++ D N G Y ++SN +AA R
Sbjct: 709 FVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGR 768
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D +R+ M+ G+KK P CSWIEV NK + F+A DKSHP I L + + +E+
Sbjct: 769 WNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEK 828
Query: 421 E-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+ TK V H+V EE+K +LY HSERLA+ +G++ TP GT IRI KNLR+C DCHT
Sbjct: 829 KGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHT 888
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K S++ QR ++VRD +RFHHFE G CSCGD+W
Sbjct: 889 FFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 157/262 (59%), Gaps = 1/262 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWNT++ GL +N LY +ALN R M N KPD ++ +++ +++KG
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKG 368
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H YAIR+GLD+N+ IG++L++MYAKC V+ F + KD ISW +IIAG QN
Sbjct: 369 KEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQN 428
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + FR++ + + + S++ AC+ L + + +++HG + + D M +
Sbjct: 429 EFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM-LQ 487
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++++Y + G+I AR F+ + DIVSWT++I +G +A+ LF +++ ++
Sbjct: 488 NAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQ 547
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P+S+A ++ L+A ++ + K
Sbjct: 548 PDSIAIISALSATANLSSLKKG 569
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 146/254 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G EAL++ R+M V + +++T + L D V G
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG ++ A+V + ++LI MYAKC R+ED+ R+F + +D +SWN++++G VQN
Sbjct: 268 MGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQN 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ + L +FR M + KP VS +++ A L GK++H IRNG D NM I
Sbjct: 328 ELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIG 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKC ++ F+ M D++SWT +I G A + +AI+LF +++ G+
Sbjct: 388 NTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMD 447
Query: 241 PNSVAFVAVLTACS 254
+ + +VL ACS
Sbjct: 448 VDPMMIGSVLRACS 461
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN ++ +G Y EA+ + + M + + D+ T SVL + G
Sbjct: 105 MSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
EIHG A++ G V + ++LI MY KC + + LF ++ +D +SWNSII+ V
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G E L FR+M + +F + + + + LG +HG ++++ +++
Sbjct: 225 AEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVY 284
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A++L+ MYAKCG + A +F+ M D VSW ++ G + DA++ F M+ G
Sbjct: 285 VANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSG 344
Query: 239 VKPNSVAFVAVLTACSHAG 257
KP+ V+ + ++ A +G
Sbjct: 345 QKPDQVSVLNLIAASGRSG 363
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 137/264 (51%), Gaps = 6/264 (2%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H ++ L A + + L+ MY KC + D+ ++F + + SWN+++ V
Sbjct: 64 QGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFV 121
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+G + E ++ ++ M + + +F S++ AC L LG ++HG ++ G+ + +F
Sbjct: 122 SSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVF 181
Query: 179 IASSLLDMYAKCGNIRLARCIFDK--MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++L+ MY KCG++ AR +FD M+ D VSW ++I + GN +A+SLF +M++
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQE 241
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV N+ FVA L + ++ K A + A +A + + G+++
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIA-MYAKCGRME 300
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
+A +M + W TLLS
Sbjct: 301 DAGRVFESMLCRDYVS-WNTLLSG 323
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 322/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW ++I G A+N + EEA+ ++ M KP+ FT +S+L + D G
Sbjct: 112 MRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIG 171
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH A++ +V +GS+L++MYA+C ++ + +F L K+ +SWN++I+G +
Sbjct: 172 RQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARK 231
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +ML + H ++SS+ + A L L GK +H +I++ F
Sbjct: 232 GDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAG 291
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G++ AR +FD++D D+V+W ++ A +G +A+S FE+M K G+
Sbjct: 292 NTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIY 351
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V F+ +LTACSH GL+ + YF M K+Y + P +H+ V LLGRAG L A
Sbjct: 352 LNQVTFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHFVTVVALLGRAGLLNFALV 410
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL+ACR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 411 FIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQ 470
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA +R M+ G+KK PACSW+E++N + FVA D +HP I + ++ +++ +
Sbjct: 471 WDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRK 530
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYVPD VL V++++++ L YHSE+LA+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 531 EGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSA 590
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISK+ REI+VRD +RFHHF +G CSC DYW
Sbjct: 591 FKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 122/227 (53%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
L P + + A ++ +++H + + + +SLI++Y KC V ++
Sbjct: 46 ELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEA 105
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
++F + KD +SW S+IAG QN + +E + ML + KP +F+S++ A
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+G+Q+H ++ + +++++ S+LLDMYA+CG + +A +FDK+D + VSW A+I
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G A G+ A+ F +M ++G + + +V ++ + G +++
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQG 272
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/515 (41%), Positives = 317/515 (61%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D +SW T++ A++ + EAL ++ ++ + DS + S+L +
Sbjct: 428 MGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLL 487
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H YAIR+GL ++ + + LI++Y +C + S LF + KD +SW S+I C N
Sbjct: 488 KQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F +M A I+P V+ SI+ A A L++L GKQ+HG +IR F +
Sbjct: 547 GRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV 606
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMY+ CG++ A +F++ D+V WTA+I +HG+ AI LF++M + G+
Sbjct: 607 SSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLT 666
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V+F+A+L ACSH+ L+++ Y + M Y + P EHYA V D+LGR+G+ +EAYE
Sbjct: 667 PDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYE 726
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P VW LL ACRVH+N LA A K+ ++P+N G Y+++SN +A +
Sbjct: 727 FIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGK 786
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +A R M +G++K PACSWIE+ N + F +GD H I+ L E+ E + +
Sbjct: 787 WNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRR 846
Query: 421 E-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
E GYV DT+ VLHD EE+K ++L+ HSER+AI FG+I T G IRI KNLRVCGDCH
Sbjct: 847 EGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHE 906
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK+ +R+I+VRD +RFHHF G CSC D+W
Sbjct: 907 FTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 141/249 (56%), Gaps = 1/249 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ SWN+V+ G +NG EAL + R M + +S+T +VL + A+ + G+E+H
Sbjct: 231 DVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELH 290
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G + N+ + L+ MYAK RV+ + R+F + KD ISWNS+++ VQN +
Sbjct: 291 AALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYA 349
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + FF +ML +P H S+ A HL+ L+ G++ H I+ ++ + ++L+
Sbjct: 350 EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLM 409
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG+I + +F+ M + D +SWT ++ A +A+ + +++K+G+ +S+
Sbjct: 410 DMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSM 469
Query: 245 AFVAVLTAC 253
++L C
Sbjct: 470 MIGSILETC 478
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 138/248 (55%), Gaps = 1/248 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +SWN+++ +N Y EA++ +M +PD + S+ + G+E H
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFH 390
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ L ++ +G++L++MY KC +E S ++F + ++D ISW +I+A Q+
Sbjct: 391 AYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHS 450
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ ++ I + SI+ C L ++ L KQ+H IRNG D + + + L+
Sbjct: 451 EALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLD-LILENRLI 509
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y +CG + +F +++ DIVSWT++I +G + A+ LF +M+K ++P+SV
Sbjct: 510 DIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSV 569
Query: 245 AFVAVLTA 252
A V++L A
Sbjct: 570 ALVSILVA 577
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 177/357 (49%), Gaps = 14/357 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNI---VRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + SWN ++ +G EA+ + +R PD TL+SVL D
Sbjct: 121 MPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDG 180
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIA 115
G E+HG A++ GLD + + ++LI MYAKC ++ + R+F L +D SWNS+++
Sbjct: 181 RCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVS 240
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
GCVQNG E L FR M A + +++ CA L L LG++LH +++ G +
Sbjct: 241 GCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSEL 300
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ ++LL MYAK G + A +F ++ D +SW +++ + +AI F +M
Sbjct: 301 NI-QCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEML 359
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ G +P+ V++ +A H ++ F++ + + + D+ + G +
Sbjct: 360 QHGFQPDHACVVSLSSALGHLSRLNNG-REFHAYAIKQRLHTDLQVGNTLMDMYIKCGSI 418
Query: 296 QEAYEFISNMHAGPTENVWLTLLSAC-----RVHKNVELAGKVAEKIFMIDPNNMGA 347
+ + + +M G +++ T + AC R + +E+ ++ ++ M+D +G+
Sbjct: 419 ECSAKVFESM--GIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGS 473
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 117/221 (52%), Gaps = 8/221 (3%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGL---DANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
VL + A +G+++H +A+ G D + + + L+ MY +C RV+D+ RLF +P
Sbjct: 63 VLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMP 122
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK---PRHVSFSSIMPACAHLTTLHL 160
+ SWN+++ + +G E ++ + M + P + +S++ AC
Sbjct: 123 ARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRC 182
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD--KMDLHDIVSWTAVIMGN 218
G ++HG ++ G D + +A++L+ MYAKCG + A +F+ + D D+ SW +V+ G
Sbjct: 183 GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+G +A++LF M+ G NS VAVL C+ GL+
Sbjct: 243 VQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLL 283
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/510 (42%), Positives = 317/510 (62%), Gaps = 40/510 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWNT+I G +G+ ++A + M
Sbjct: 188 MVVRDVVSWNTLISGYCFSGMVDKARMVFDGM---------------------------- 219
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ N+ S++I+ YA+ +E++ +LF +P+++ +SWN++IAG QN
Sbjct: 220 -----------MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQN 268
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + ++ FRQM + P V+ S++ ACAHL L LGK +H I RN + +F+
Sbjct: 269 EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFL 328
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L DMYAKCG + A+ +F +M D++SW+ +IMG A++G A++A + F +M +DG+
Sbjct: 329 GNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGL 388
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN ++F+ +LTAC+HAGL+DK YF+ M + YGI P EHY V DLL RAG+L +A
Sbjct: 389 EPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAE 448
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I++M P VW LL CR++K+ E +V +I +D N+ G+ V L+N YA+
Sbjct: 449 SLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMG 508
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R DAAS R+ MR+ KTP CSWIE+ N Y F GD SHP RI ++EL +M+
Sbjct: 509 RLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMK 568
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY P T V+H+++EE+K++ L HSE+LA+ FG+I T +GTTIRI+KNLRVC DCH
Sbjct: 569 VAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHD 628
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
AIK ISKIV+REI+VRD SRFHHF+DGKCS
Sbjct: 629 AIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 41/269 (15%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD +T +SVL A V++G+++H + ++G ++N+ + +SL+++Y K + +L
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F + V+D +SWN++I+G +G+ D+ F M+
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMM------------------------ 220
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+ N+ S+++ YA+ GN+ AR +F+ M + ++VSW A+I G
Sbjct: 221 ---------------EKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGY 265
Query: 219 ALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A + DAI LF QM+ + G+ PN V V+VL+AC+H G +D + + + I
Sbjct: 266 AQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLG-KWIHRFIRRNKIEV 324
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMH 306
A+AD+ + G + EA MH
Sbjct: 325 GLFLGNALADMYAKCGCVLEAKGVFHEMH 353
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 113/227 (49%), Gaps = 15/227 (6%)
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTL 158
L + ++N+++ Q+ + + +F L+ P +F+S++ ACA L +
Sbjct: 84 FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQV 143
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G+++H + + G + N+F+ +SL+D+Y K G +A+ +FD+M + D+VSW +I G
Sbjct: 144 LEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY 203
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
G A +F+ M ++ N V++ +++ + G +++A F +M ++
Sbjct: 204 CFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVS-- 257
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNM-HAG---PTENVWLTLLSAC 321
+ A+ + K +A E M H G P + +++LSAC
Sbjct: 258 ---WNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSAC 301
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 323/515 (62%), Gaps = 8/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+VSWNT++ GL+++G EEA + M N S + ++++ FA D+
Sbjct: 106 MPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRN----SVSWNAMVSGFACSRDMSAA 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E A G + + +++++ Y V + F +PV++ +SWN+++AG V+N
Sbjct: 162 EEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKN 218
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
D+ L+ FR M+ A ++P + SS++ C++L+ L GKQ+H ++ N+ +
Sbjct: 219 SHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTV 278
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MY KCG++ A +F +M D+V+W A+I G A HG+ +AI+LFE+M+ +GV
Sbjct: 279 GTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGV 338
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + FVAVLTAC H GL D F M + YGI P +HY+ + DLL RAGKL+ A
Sbjct: 339 EPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAV 398
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P + + TLL+ACRV+KN+E A A K+ DP + GAYV L+N YA A
Sbjct: 399 DLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGAN 458
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W D + +R +M++ + KTP SWIE+K + F + D+ HP + I+E L +L ERM+
Sbjct: 459 QWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMK 518
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD VLHDV+E K +L HSE+LAI FG+I T G T+RI KNLRVCGDCH
Sbjct: 519 AMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHN 578
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI REII+RD +RFHHF G CSCGDYW
Sbjct: 579 AAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 133/284 (46%), Gaps = 28/284 (9%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++L++ + + + RLF +PV+D +SWN++++G ++G +E F M +
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRN-- 141
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARC 198
VS+++++ A + ++ RN + + + ++++ Y GN+ A
Sbjct: 142 --SVSWNAMVSGFACSRDMSAAEEW----FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIE 195
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAG 257
F+ M + ++VSW AV+ G + +A DA+ LF M ++ V+PN+ +VL CS+
Sbjct: 196 YFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLS 255
Query: 258 LID-----KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
+ W ++++ + S + + + G L A + MH T +
Sbjct: 256 ALGFGKQIHQWCMKLPLSRNLTVGTS------LVSMYCKCGDLSSACKLFGEMH---TRD 306
Query: 313 V--WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
V W ++S H + + A + E++ ++PN + +L+
Sbjct: 307 VVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 350
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 309/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + SW I G G EA+++ R++ + L+PDSF+L VL D+ G
Sbjct: 169 IPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y +G+ NV + ++L++ Y KC +E + +F + K+ +SW+S+I G N
Sbjct: 229 EWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L F +ML +KP + ++ +CA L L LG I N F DN +
Sbjct: 289 GLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLG 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + A +F M D V W A I G A+ G+ DA+ LF QMEK G+K
Sbjct: 349 TALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIK 408
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ FV +L AC+HAGL+++ YFNSM + + P EHY + DLLGRAG L EA++
Sbjct: 409 PDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQ 468
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M VW LL CR+H++ +L V +K+ ++P + G YV+LSN YAA+ +
Sbjct: 469 LIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHK 528
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++AA +R M +G+KK P SWIEV + F+ GD SHP +I L EL + ++
Sbjct: 529 WEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKA 588
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T VL D+EEE+K++ + HSE+LA+ FG+I T I ++KNLRVCGDCH A
Sbjct: 589 AGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEA 648
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS+I REIIVRDN+RFH F DG CSC DYW
Sbjct: 649 IKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 161/297 (54%), Gaps = 1/297 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I GL N ++E++ I M L PDSFT VL A +D G ++H +
Sbjct: 76 FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV 135
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +A+ + SLIN+Y KC ++++ ++F +P K+ SW + I+G V G E +
Sbjct: 136 KAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAID 195
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FR++L ++P S ++ AC L G+ + I NG N+F+A++L+D Y
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG 255
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN+ AR +FD M +IVSW+++I G A +G +A+ LF +M +G+KP+ A V
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
VL +C+ G ++ N + + + S A + D+ + G++ A+E M
Sbjct: 316 VLCSCARLGALELGDWASNLINGNEFLDNSVLGTALI-DMYAKCGRMDRAWEVFRGM 371
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH +R GLD + + + ++ S R+ + +N++I G V N
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E ++ + M + P +F ++ ACA + LG ++H +++ G + + F+
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SL+++Y KCG I A +FD + + SWTA I G G +AI +F ++ + G++
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S + V VL+AC G + ++ + + + G+ + A+ D G+ G ++ A
Sbjct: 207 PDSFSLVEVLSACKRTGDL-RSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARS 265
Query: 301 FISNM 305
M
Sbjct: 266 VFDGM 270
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 321/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MP D V+WN +I G A N EA+ + + + + T+ SVL + D++K
Sbjct: 1210 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 1269
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G IH + + G +++ + +SLI MYAKC + S+ +F L K I+WN+++A
Sbjct: 1270 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 1329
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E LK F +M + SFS + A A+L L G+QLHG +I+ GF+ ++ +
Sbjct: 1330 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 1389
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++ +DMY KCG + + + +SW +I A HG A F +M K G
Sbjct: 1390 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V FV++L+AC+H GL+D+ +Y++SMT+++G+ P EH + DLLGR+G+L A
Sbjct: 1450 KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAE 1509
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI M P + W +LL+ACR+H N+ELA K AE + +DP++ AYV+ SN A +
Sbjct: 1510 GFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSG 1569
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D +LR M + +KK PACSW+++K+K ++F G+K HP RI+ L EL++ +
Sbjct: 1570 KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 1629
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPDT LHD++EEQK+ L+ HSERLA+ FG+I TP+ +T+RI KNLRVCGDCH+
Sbjct: 1630 EAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHS 1689
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S IV R+I++RD RFHHF GKCSCGDYW
Sbjct: 1690 VYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 219/426 (51%), Gaps = 3/426 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN +I G A G +++ + R M L PD +TL SVL A+ +I +IH
Sbjct: 196 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIH 255
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G + G + + LIN YAK + + L + KD S ++I G G++
Sbjct: 256 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYS 315
Query: 125 -EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L F++M I V S++ CA+L + LG Q+H ++ ++ + ++L
Sbjct: 316 VDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNAL 375
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMYAK G I A+ FD+M+ +++SWT++I G A HG H A+SL+++ME G KPN
Sbjct: 376 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPND 435
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F+++L ACSH GL + FN+M Y I P EHY+ + DL R G L+EAY +
Sbjct: 436 VTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLC 495
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+ ++W +L A ++ + L + A +F + P N YV+L++ Y+AA W D
Sbjct: 496 KIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDD 555
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAF--VAGDKSHPFYHRINEALKELLERMEQE 421
A +R M + KK S+ + K+ V S ++ ++ L R QE
Sbjct: 556 AWKIRKLMEERSTKKNAGYSFFQATKKSIPLLQVQHGVSRRDFNILDFGAIFLSNRTPQE 615
Query: 422 GYVPDT 427
PDT
Sbjct: 616 ECFPDT 621
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 149/254 (58%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWN +I A +GL E+L M +++ + +S TLSS+L + + ++ G
Sbjct: 1008 MNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG 1067
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHG ++ GLD+NVCI ++L+ +Y++ R ED+ +F + +D ISWNS++A VQ+
Sbjct: 1068 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 1127
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +GLK ++L HV+F+S + AC++ L K +H II GF D + +
Sbjct: 1128 GKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVG 1187
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G + A+ + M D V+W A+I G+A + ++A+ ++ + + G+
Sbjct: 1188 NALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIP 1247
Query: 241 PNSVAFVAVLTACS 254
N + V+VL ACS
Sbjct: 1248 ANYITMVSVLGACS 1261
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 167/343 (48%), Gaps = 3/343 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SWN+++ ++G + L I+ ++ + + T +S L ++ +I+
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H I G + +G++L+ MY K + ++ ++ +P D ++WN++I G +N
Sbjct: 1169 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAEN 1228
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E +K ++ + I +++ S++ AC A L G +H I+ GF+ + ++
Sbjct: 1229 EEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYV 1288
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MYAKCG++ + IFD + ++W A++ NA HG +A+ +F +M GV
Sbjct: 1289 KNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGV 1348
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ +F L A ++ ++++ + + G A D+ G+ G++ +
Sbjct: 1349 NLDQFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVL 1407
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP 342
+ + + W L+SA H + A + ++ + P
Sbjct: 1408 KMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 135/244 (55%), Gaps = 11/244 (4%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFADYVDVIKGK 61
SW+T++ G R GLYEEA+ + QM + ++P+ F ++S++ AD +G
Sbjct: 812 SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD-----EGF 866
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++HG+ ++ G+ +V +G++L++ Y V ++ +LF +P + +SW S++ G +G
Sbjct: 867 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E L +++M + +F+++ +C L LG Q+ G II+ GF+D++ +A+
Sbjct: 927 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 986
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ M++ ++ A +FD M+ DI+SW A+I A HG +++ F M +
Sbjct: 987 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 1046
Query: 242 NSVA 245
NS
Sbjct: 1047 NSTT 1050
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 170/346 (49%), Gaps = 19/346 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSW ++ G ++NG +E+A + M + +K + FT S L + G
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMG 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ G + N+ + S+L++ ++KC ++ED+ LF + +D +SWN++I G
Sbjct: 151 IQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQ 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D+ FR ML + P + S++ A A L + Q+HG I + G+ +
Sbjct: 211 GFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT 270
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEKDGV 239
L++ YAK G++R A+ + M D+ S TA+I G A G + DA+ LF++M + +
Sbjct: 271 GLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNI 330
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA----PSFE--HYAAVADLLGRAG 293
+ V ++L C++ + F T+ + A PS++ A+ D+ ++G
Sbjct: 331 GMDDVILCSMLNICANL-------ASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383
Query: 294 KLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
++++A M +NV W +L+S H +A + +K+
Sbjct: 384 EIEDAKRAFDEME---EKNVISWTSLISGYAKHGYGHMAVSLYKKM 426
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 172/399 (43%), Gaps = 51/399 (12%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G IH + I +G +++ + + LI Y K V + +F +P + +SW ++++G
Sbjct: 48 QGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYS 107
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG F++ F M +K ++ S + AC L L +G Q+ GCI + F +N+F
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLF 167
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+D ++KCG + A +F M D+VSW A+I G A+ G A D+ +F M + G
Sbjct: 168 VKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 227
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLL----GRAG 293
+ P+ +VL A + G + A +T+ YG Y V LL + G
Sbjct: 228 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG------SYDIVTGLLINAYAKNG 281
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
L+ A + M L + G E I+ +D
Sbjct: 282 SLRSAKDLRKGM------------LKKDLFSSTALITGYAHEGIYSVD------------ 317
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL-- 411
A +K+ + N GM CS + + +F G + H F + +
Sbjct: 318 ---ALDLFKEMNQM-----NIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDV 369
Query: 412 ---KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
L++ + G + D K ++EE KN++ + S
Sbjct: 370 AMGNALIDMYAKSGEIEDAKRAFDEMEE---KNVISWTS 405
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 160/324 (49%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++VG + +G E LN+ ++M + + T ++V D + G
Sbjct: 907 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 966
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ G+ I++G + +V + +SLI+M++ + VE++ +F + D ISWN++I+ +
Sbjct: 967 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 1026
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F M + + SS++ C+ + L G+ +HG +++ G D N+ I
Sbjct: 1027 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 1086
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL +Y++ G A +F M D++SW +++ G D + + ++ + G
Sbjct: 1087 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 1146
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQ 296
N V F + L ACS+ + ++ + I F + V + L G+ G +
Sbjct: 1147 MNHVTFASALAACSNPECLIES-----KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM 1201
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
EA + + M P W L+
Sbjct: 1202 EAKKVLQTM-PQPDRVTWNALIGG 1224
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 48 LPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA 107
L F++ + GK +H + I ++ + ++LINMY+K +E + +F + ++
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810
Query: 108 ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-HLGKQLHG 166
SW+++++G V+ GL++E + F QM ++P +S++ AC+ + G Q+HG
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
+++ G ++++ ++L+ Y G + A+ +F++M H++VSWT++++G + GN +
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTAC 253
++++++M ++GV N F V ++C
Sbjct: 931 VLNVYQRMRQEGVSGNQNTFATVTSSC 957
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ +T+ GK LH I + +F ++L++MY+K GNI AR +FD+M + SW+
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ G G +A+ LF QM GV+PN +++TACS +G + +
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
GI A+ G G + A + M P NV W +L+
Sbjct: 875 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM---PDHNVVSWTSLM 919
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ C G +H +I NGF ++ + + L+ Y K G++ AR +FD M
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSWTA++ G + +G A LF M GVK N + + L AC+ +D
Sbjct: 96 VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ K + F +A+ D + GK+++A M
Sbjct: 156 CIQKGRFVENLFVK-SALVDFHSKCGKMEDASYLFGTM 192
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW ++I G A++G A+++ ++M + KP+ T S+L + +G
Sbjct: 395 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 454
Query: 61 KE-----IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
E ++ Y I+ + C +++++A+ +E+++ L C + +K +A W +I+
Sbjct: 455 CECFNNMVNKYNIKPRAEHYSC----MVDLFARQGLLEEAYNLLCKIDIKHNASLWGAIL 510
Query: 115 A 115
Sbjct: 511 G 511
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/519 (42%), Positives = 326/519 (62%), Gaps = 6/519 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D+V W +I A N AL +VR+M +K T S+L A +D+ G
Sbjct: 195 PEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGV 254
Query: 62 EIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
H A GLD ++ + +L+N+Y KC RV+D+ R+ +PV+ ++SW ++IA QN
Sbjct: 255 AFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQN 314
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F+ M + +P ++ S++ +CA L TL LGK++H I + F ++ +
Sbjct: 315 GNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLML 374
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++++ MY KCGN+ LAR +F+ + L +V+WTA+I A +G +AI LF++M D
Sbjct: 375 LNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLID 434
Query: 238 G-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G +PN V F++VL ACSH G +++AW +F SM D+G+ P+ +HY + DLLGRAG+L
Sbjct: 435 GGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLG 494
Query: 297 EAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EA + + + V W+ LSAC+++ ++E + + A+++ ++P N+ V+LSN Y
Sbjct: 495 EAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVY 554
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
AA R D A +R M++ G+KK SWIE+ N+ + F+ D SHP I L+ L
Sbjct: 555 AAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLH 614
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+++ GYVPDTK VL DV+EE+K LL YHSERLA+ GII TP GTT+R++KNLRVC
Sbjct: 615 REIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCS 674
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFIS+IV R+IIVRD SRFHHF+DG CSCGDYW
Sbjct: 675 DCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 1/294 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN ++ A+NG A + M + ++P++ TLS+ L ++ G++++
Sbjct: 100 SWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELI 159
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
L+ + + SSLI MY +C +E++ R F P KD + W ++I+ N L
Sbjct: 160 ASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRAL 219
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIASSLLDM 186
+ R+M + IK ++ S++ ACA L G H G D + +A +L+++
Sbjct: 220 ELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNL 279
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG + AR + D M + VSWTA+I A +GNA +AI+LF+ M+ +G +P+ +
Sbjct: 280 YGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITL 339
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
++V+ +C+ G + + + S AV + G+ G L+ A E
Sbjct: 340 ISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELARE 393
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 5/262 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H LD N +G+ L++ Y+K + + F + + +A SWN ++A QN
Sbjct: 52 RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F M ++P V+ S+ + AC L LG++L+ I + + +
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+ MY +C I A FD+ D+V WTA+I A + A+ L +M+ +G+K
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231
Query: 241 PNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAA-VADLLGRAGKLQEA 298
+V++L AC A +D + F+ G+ S A + +L G+ G++ +A
Sbjct: 232 LGLPTYVSLLDAC--ASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDA 289
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
+ M T W +++A
Sbjct: 290 RRVLDAMPV-RTSVSWTAMIAA 310
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 17/262 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV VSW +I A+NG EA+N+ + M +P TL SV+ A + G
Sbjct: 296 MPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLG 355
Query: 61 KEIHGYAIRH--GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAG 116
K IH IR ++ + +++I MY KC +E + +F +P+ + ++W ++I
Sbjct: 356 KRIHAR-IRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRA 414
Query: 117 CVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
QNG+ +E ++ F++MLI +P V+F S++ AC+HL L + H C + G D
Sbjct: 415 YAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSM--GPDF 471
Query: 176 NMFIASS----LLDMYAKCGNIRLA-RCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAIS 229
+ A L+D+ + G + A + + D D+V W A + ++G+ +
Sbjct: 472 GVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR 531
Query: 230 LFEQMEKDGVKPNSVAFVAVLT 251
+++ + ++P +VA +L+
Sbjct: 532 AAKRVSE--LEPENVAGRVLLS 551
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/517 (41%), Positives = 320/517 (61%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
M V + V+W+ ++ G G EA ++ + M G L P S ++S L A+ D+
Sbjct: 294 MAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS--VASALRACANLSDL 351
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
GK++H + GL ++ G+SL++MYAK ++ + LF + VKD +S++++++G
Sbjct: 352 CLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGY 411
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG DE + FR+M ++P + S++PAC+HL L GK HG +I G
Sbjct: 412 VQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASET 471
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++L+DMYAKCG I L+R IFD M DIVSW +I G +HG +A +LF M+
Sbjct: 472 SICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQ 531
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+P+ V F+ +++ACSH+GL+ + +F+ M YGI P EHY + DLL R G L E
Sbjct: 532 ACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDE 591
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY+FI M VW LL ACRVHKN++L +V+ I + P G +V+LSN ++A
Sbjct: 592 AYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSA 651
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R+ +AA +R+ + +G KK+P CSWIE+ +AF+ GD+SH I + L +L
Sbjct: 652 AGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVD 711
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ + GY DT VL DVEEE+K+ L YHSE+LAI FG++ + TI + KNLRVCGDC
Sbjct: 712 INKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDC 771
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK+++ + +R IIVRD +RFHHF++G+CSCGD+W
Sbjct: 772 HTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 188/348 (54%), Gaps = 20/348 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+WN ++ G A +G Y + + + M + + P++ TL ++LP+ A + + +G
Sbjct: 190 MPARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQG 248
Query: 61 KEIHGYAIR----HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ +H Y++R H V +G++L++MYAKC + + R+F + V++ ++W++++ G
Sbjct: 249 RAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGG 308
Query: 117 CVQNGLFDEGLKFFRQML---IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
V G E F+ ML + + P S +S + ACA+L+ L LGKQLH + ++G
Sbjct: 309 FVLCGRMLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDLCLGKQLHALLAKSGL 366
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
++ +SLL MYAK G I A +FD+M + D VS++A++ G +G A +A +F +
Sbjct: 367 HTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRK 426
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M+ V+P+ V+++ ACSH + S+ GIA A+ D+ + G
Sbjct: 427 MQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCG 485
Query: 294 KLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM 339
++ + + M P ++ W T+++ +H GK A +F+
Sbjct: 486 RIDLSRQIFDVM---PARDIVSWNTMIAGYGIHG----LGKEATALFL 526
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 166/366 (45%), Gaps = 53/366 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + +N +I + G +P+++T VL + +D+
Sbjct: 89 IPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSA 148
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +A R GL A++ + ++L+++YAKCA + +F +P +D ++WN+++AG +
Sbjct: 149 RAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALH 208
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR----NGFDDN 176
G + + + ++ P + +++P A L G+ +H +R + D
Sbjct: 209 GKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDG 267
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + ++LLDMYAKCG++ A +F+ M + + V+W+A++ G L G +A SLF+ M
Sbjct: 268 VLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLA 327
Query: 237 DG---VKPNSVAFVAVLTACSH-----------------------------------AGL 258
G + P SVA + L AC++ AGL
Sbjct: 328 QGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGL 385
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA---GPTENVWL 315
ID+A + F+ M ++ Y+A+ + GK EA+ M A P +
Sbjct: 386 IDQATTLFDQMVVKDTVS-----YSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMV 440
Query: 316 TLLSAC 321
+L+ AC
Sbjct: 441 SLIPAC 446
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C + + LF +P +N++I G + +P + +F +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC+ L L + +H R G ++F++++L+D+YAKC + R A +F +M D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
V+W A++ G ALHG D I+ M+ D PN+ VA+L + G + +
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQG 248
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/518 (41%), Positives = 324/518 (62%), Gaps = 6/518 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D VSWN++IV ++ +AL + R M + + D FTL+SVL F+ D+ G +
Sbjct: 203 VRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQ 262
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
H AI+ G + N +GS LI+MYAKC A + +S ++F + D + WN++I+G QN
Sbjct: 263 FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNK 322
Query: 122 -LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF-I 179
L E L+ FRQM A P SF + AC++L++ GKQ H +++ N +
Sbjct: 323 ELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISV 382
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY+KCGN++ AR +F +M H+ V+ ++I G A HG ++++LFEQM +
Sbjct: 383 NNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASI 442
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P S+ V++L+AC+H G +++ YFN M +GI P EHY+ + DLLGRAGKL EA
Sbjct: 443 APTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAE 502
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I M P W LL ACR + N+ELA K A + ++P N Y++L++ Y+AAR
Sbjct: 503 RLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAAR 562
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++AA +R MR++G++K P CSWIE+ + + FVA D SHP I+ L E+ +M+
Sbjct: 563 KWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMK 622
Query: 420 QEGYVPDTKEVL---HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ GYVPD + + E++K+ +L +HSE+LA+ FG++ T G + ++KNLR+CGD
Sbjct: 623 RAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGD 682
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH AIKF+S I +R+I VRD RFH FEDG+CSCGDYW
Sbjct: 683 CHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 156/309 (50%), Gaps = 6/309 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLVS+NT+I A G AL++ +M + L D FT S V+ ++V +I
Sbjct: 100 IPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLI-- 157
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL--PVKDAISWNSIIAGCV 118
+++H A G D+ V + +SL+ Y+K +E++ +F + V+D +SWNS+I
Sbjct: 158 RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYG 217
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q+ + L +R M+ + + +S++ + + L G Q H I+ GF+ N
Sbjct: 218 QHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRH 277
Query: 179 IASSLLDMYAKCG-NIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEK 236
+ S L+DMYAKCG + +R +F+++ D+V W +I G + + + +A+ F QM++
Sbjct: 278 VGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQR 337
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G P+ +FV ++ACS+ + + K + A+ + + G LQ
Sbjct: 338 AGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQ 397
Query: 297 EAYEFISNM 305
+A + M
Sbjct: 398 DARKLFQRM 406
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 42/252 (16%)
Query: 41 SFTLSSVLPIFADYV---DVIKGKEIHG-------------------------------Y 66
S+TL S I + D++ GK +H +
Sbjct: 5 SWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHH 64
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
A + NV ++LI YAK + + +H LF +P D +S+N++I G
Sbjct: 65 AFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSA 124
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDNMFIASSLL 184
L F +M + +FS ++ AC + H+G +QLH +GFD + + +SLL
Sbjct: 125 LSLFGEMREMGLVMDGFTFSGVITACCN----HVGLIRQLHSLAFSSGFDSYVSVKNSLL 180
Query: 185 DMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
Y+K G + A +F+ M ++ D VSW ++I+ H A++L+ M G + +
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240
Query: 243 SVAFVAVLTACS 254
+VLT S
Sbjct: 241 MFTLASVLTTFS 252
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS----IMPACAHLTTLHLG-KQ 163
S+ I+ C+ N G K + + + P S+ + C LTT H Q
Sbjct: 10 SFRQILKSCIANKDLLTG-KSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ 68
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
H + N+F ++L+ YAK I +A +FD++ D+VS+ +I A G+
Sbjct: 69 TH--------EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD 120
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTA-CSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
A+SLF +M + G+ + F V+TA C+H GLI + S + F+ Y
Sbjct: 121 TLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHS--------LAFSSGFDSY 172
Query: 283 AAVADLL----GRAGKLQEAYEFISNMHAGPTENV-WLTLLSACRVHK 325
+V + L + G L+EA + M + V W +++ A HK
Sbjct: 173 VSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHK 220
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+ N++I G A++G+ E+LN+ QM ++ P S TL S+L A V +G
Sbjct: 406 MPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEG 465
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
K+ G++ S +I++ + ++ ++ RL +P + +W +++ C
Sbjct: 466 KKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACR 525
Query: 119 QNGLFDEGLKFFRQMLIAKIKP 140
+ G + K Q L +++P
Sbjct: 526 KYGNMELAEKAANQFL--QLEP 545
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/514 (40%), Positives = 326/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ SW ++I G A+N + +EAL ++ M KP+ FT +S+L G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH +++ +V +GS+L++MYA+C R++ + +F L K+ +SWN++IAG +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F +M + H ++SS+ A A + L GK +H +I++G + F+
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++LDMYAK G++ AR +FD +D D+V+W +++ A +G +A++ FE+M K GV
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + F+++LTACSH GL+ + YF+ M K++ + P +HY V DLLGRAG L +A
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFD-MMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL +CR+HKN ++ A+ +F +DP++ G V+L N YA+ +
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA +R M+ G+KK PACSW+E++N + FVA D +HP I + +E+ ++ +
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL V+E++++ L YHSE++A+ F +I P G TIRI+KN+R+CGDCH+A
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ISK+ +REI+VRD +RFHHF G CSCGDYW
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 322/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W+T++ G G +A+ + R+M +K D + V+ +V G
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HG+ +RHG+ +V +SL++MYAK ++ + R+F L+ ++ +SW+++I+G QN
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L+ FR M + I+P + S + AC+++ L LG+ +HG I+R FD N +
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILG 347
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ +DMY+KCG++ A+ +F+ + D++ W A+I HG DA++LF++M + G++
Sbjct: 348 TAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMR 407
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL+++ +F M + I P+ +HY + DLL R+G ++EA +
Sbjct: 408 PDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASD 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M A PT +W+ LLS C +K +EL +A+ I + P+++G ++SN YAA ++
Sbjct: 468 LLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKK 527
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ G KK P CS IE++ + FV D+SHP I + +L M +
Sbjct: 528 WDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRK 587
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P T+ V HD+EEE K+ L YHSERLAI FG++ T GT + IIKNLRVCGDCH A
Sbjct: 588 MGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDA 647
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+ISKI REI+VRD RFHHF+DG CSC DYW
Sbjct: 648 IKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 159/308 (51%), Gaps = 4/308 (1%)
Query: 17 ARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANV 76
+R G AL + R + +PDS T + L A D+ G+ + A G +V
Sbjct: 85 SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 77 CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA 136
+ SSL+++YA+ + D+ ++F +P +D ++W++++AG V G + ++ +R+M
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+K V ++ AC + +G +HG ++R+G ++ A+SL+DMYAK G + +A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+F M + VSW+A+I G A +G + +A+ LF M+ G++P+S A V+ L ACS+
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
G + S + + + A D+ + G L A + + NM + +W
Sbjct: 324 GFLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNA 380
Query: 317 LLSACRVH 324
+++ C H
Sbjct: 381 MIACCGAH 388
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/521 (41%), Positives = 321/521 (61%), Gaps = 9/521 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
+P + V + G RN L L+I R M G+ + D L A D
Sbjct: 150 IPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVV-DEAAALVALSASARVPDR 208
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA--RVEDSHRLFCLLPVKDAISWNSIIA 115
IH + GLD + +++I+ YAK + + +LF ++ +D +SWN++IA
Sbjct: 209 GITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIA 267
Query: 116 GCVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
QNGL E L + +MLI ++ V+ S+++ ACAH + GK++H ++R G
Sbjct: 268 LYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGL 327
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+DN+++ +S++DMY+KCG + +A F K+ +I+SW+A+I G +HG +A+ +F
Sbjct: 328 EDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTD 387
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M K G+KPN + F+ VL ACSHAGL+ + ++N+M ++GI P EHY + DLLGRAG
Sbjct: 388 MRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAG 447
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
L EAY I M P +W LLSACR++KNVELA AE++F +D N G YV+LSN
Sbjct: 448 CLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSN 507
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YA A WK+ +RV ++ +G++K P S +E+K K + F GDKSHP Y I L++
Sbjct: 508 IYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEK 567
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
LLER+ GYVP+T VLHD++ E+++++L HSE+LA+ F ++ + G+ I +IKNLRV
Sbjct: 568 LLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRV 627
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCH AIK I+K+ REII+RD RFHHF+DG CSCGDYW
Sbjct: 628 CTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 9/248 (3%)
Query: 60 GKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+++H A+R GL ++ S+L++MY C R D+ R F +P + + ++ +GC+
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 119 QNGLFDEGLKFFRQMLIAKIKP--RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+N L L FR M+ + + + A A + + +H + + G D
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226
Query: 177 MFIASSLLDMYAKCG--NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+A++++D YAK G ++ AR +FD MD D+VSW +I A +G + +A+ L+ +M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSKM 285
Query: 235 EKDG--VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
G V+ N+V AVL AC+HAG I N + + G+ + +V D+ +
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVR-MGLEDNVYVGTSVVDMYSKC 344
Query: 293 GKLQEAYE 300
GK++ A++
Sbjct: 345 GKVEMAWK 352
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 195/437 (44%), Positives = 291/437 (66%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ ++L++MYAK + + +F + KD ISW S++ GCV NG ++E L+ F +M I
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
I P + ++++ ACA LT L GKQ+H +++G ++ + +SL+ MYAKCG I A
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+FD M++ D+++WTA+I+G A +G ++++ + M GVKP+ + F+ +L ACSHAG
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTL 317
L++ SYF SM + YGI P EHYA + DLLGR+GKL EA E ++ M P VW L
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243
Query: 318 LSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMK 377
L+ACRVH NVEL + A +F ++P N YV+LSN Y+AA +W++AA R M+ +G+
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303
Query: 378 KTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEE 437
K P CSWIE+ +K + F++ D+SHP I + E++ +++ GYVPD LHD++EE
Sbjct: 304 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEE 363
Query: 438 QKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDN 497
K+ L YHSE+LA+ FG++ P G IRI KNLR+CGDCHTA+K++S + R +I+RD+
Sbjct: 364 GKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 423
Query: 498 SRFHHFEDGKCSCGDYW 514
+ FHHF +G CSC DYW
Sbjct: 424 NCFHHFREGACSCSDYW 440
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 143/268 (53%), Gaps = 11/268 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SW +++ G NG YEEAL + +M + + PD +++VL A+ + G
Sbjct: 28 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFG 87
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H ++ GL +++ + +SL++MYAKC +ED++++F + ++D I+W ++I G QN
Sbjct: 88 KQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 147
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G E L F+ M+ + +KP ++F ++ AC+H + G+ + G
Sbjct: 148 GRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEH 207
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH----DAISLFEQM 234
+ ++D+ + G + A+ + ++M + D W A++ +HGN A +LFE
Sbjct: 208 YACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELE 267
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKA 262
K N+V +V + S AG ++A
Sbjct: 268 PK-----NAVPYVLLSNLYSAAGKWEEA 290
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/518 (41%), Positives = 329/518 (63%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEA---LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
M V D+V+W ++I G +++G A L + +M L+P+ F LSS++
Sbjct: 152 MCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSC 211
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+ GK+IHG ++G NV +GSSL++MYA+C + +S +F L K+ +SWN++I+G
Sbjct: 212 VDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGF 271
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ G +E L F +M ++S+++ + + +L GK LH ++++G
Sbjct: 272 ARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVG 331
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK- 236
++ ++LL MYAK GNI A+ +FD++ D+VS ++++G A HG +A+ LFE+M
Sbjct: 332 YVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLW 391
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
++PN + F++VLTACSHAGL+D+ YF M K YG+ P HY V DL GRAG L
Sbjct: 392 VEIEPNDITFLSVLTACSHAGLLDEGLYYFELM-KKYGLEPKLSHYTTVVDLFGRAGLLD 450
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+A FI M P +W LL A ++HKN E+ A+K+ +DP GA+ +LSN YA
Sbjct: 451 QAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYA 510
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+A +WKD A +R M++ G+KK PACSW+E++N + F A D SHP +++ E + L +
Sbjct: 511 SAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQ 570
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++++ GYVPDT V V++++K+ L YHSE+LA+ F ++ T G+ IRI+KN+RVCGD
Sbjct: 571 KIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGD 630
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+AIK++S +V+REIIVRD +RFHHF DG CSC DYW
Sbjct: 631 CHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 137/241 (56%), Gaps = 3/241 (1%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
L+++ + N +L+PD + +L + +GK +H + + ++ I +S++
Sbjct: 75 GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE---GLKFFRQMLIAKIKPR 141
MYAKC +E + ++F + VKD ++W S+I G Q+G L F +M+ ++P
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+ SS++ C L + GKQ+HGC + GF +N+F+ SSL+DMYA+CG +R +R +FD
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFD 254
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+++ + VSW A+I G A G +A+ LF +M+++G + A+L + S G +++
Sbjct: 255 ELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQ 314
Query: 262 A 262
Sbjct: 315 G 315
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
++P ++ ++ C L L GK +H ++ + F +++ I +S+L MYAKCG++ +
Sbjct: 85 GSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEI 144
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHG---NAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
AR +FD+M + D+V+WT++I G + G +A A+ LF +M +DG++PN A +++
Sbjct: 145 ARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKC 204
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
C G K YG + +++ D+ R G+L+E+ + + E
Sbjct: 205 CGFLGSCVDGKQIHGCCWK-YGFQENVFVGSSLVDMYARCGELRESRLVFDELES-KNEV 262
Query: 313 VWLTLLSA 320
W L+S
Sbjct: 263 SWNALISG 270
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/517 (41%), Positives = 318/517 (61%), Gaps = 6/517 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D S NTV+ A + AL + R+ PD+ T +L A + + G
Sbjct: 85 LPSPDPFSLNTVLRIFASSARPRVALALHRRH---LAPPDTHTYPPLLQACARLLALRYG 141
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCV 118
+ +H A ++GL + V + +SL+++Y C E +HR+F +P ++ +SWNS++ G
Sbjct: 142 EGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFA 201
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG +E L FR+ML + P + S++ ACA + L LG+++H + + G N
Sbjct: 202 ANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAH 261
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++L+D+YAKCG + AR +F +M + +VSWT++I+G A++G DA+ LF ME++
Sbjct: 262 AGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMERE 321
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ P + V VL ACSH GL+D + YF+ M +YGI P EH + DLLGRAG+++E
Sbjct: 322 KLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEE 381
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A+ +I+ M P VW TLL AC +HK +E+ ++ +DP + G YV+LSN YA
Sbjct: 382 AHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAG 441
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
RW D LR M G++K P S +E++N Y FV GD+SHP +I E L ++ ER
Sbjct: 442 VGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAER 501
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ ++GY+P T VL D+E+E+K++ L YHSERLAI F ++ + GT IRI+KNLRVCGDC
Sbjct: 502 LRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDC 561
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H AIK ISK+ REIIVRD SRFHHF+ G CSC DYW
Sbjct: 562 HMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 321/515 (62%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N +I A G +E++++ +++ +F ++L I A +D+ G
Sbjct: 302 MPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMG 361
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + D + + +SL++MYAKC + E++ R+F L + + W ++I+ VQ
Sbjct: 362 RQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQR 421
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL + GLK F +M A + +F+ ++ A A+L ++ LGKQLH C+IR+GF N++
Sbjct: 422 GLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSG 480
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LLDMYA C +I+ A F++M ++V+W A++ A +G+ + FE+M G +
Sbjct: 481 CALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQ 540
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+F+ +LTACSH L+++ YFN M+ Y +AP EHY A+ D L R+G+ EA +
Sbjct: 541 PDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEK 600
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAYVILSNTYAAAR 359
+ M P E VW ++L++CR+HKN LA K A ++F M + YV +SN +A A
Sbjct: 601 LMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAG 660
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W ++ MR++G++K PA SW+E+K+K + F A D HP I ++ L E+ME
Sbjct: 661 QWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQME 720
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY PD +V++E K + L YHSERLAI F +I TP+G+ I ++KNLR C DCH
Sbjct: 721 KEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 780
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV REI VRD++RFHHF DG CSCGDYW
Sbjct: 781 AIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 132/255 (51%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VS+N +I G A NGL EEA+ + +M N+ KP FT ++V+ D G++IH
Sbjct: 205 DSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIH 264
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ ++ NV +G++ ++ Y+K V + +LF +P D +S+N II G
Sbjct: 265 GFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVK 324
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + F+++ ++ F +++ A L +G+QLH ++ + D + +++SL+
Sbjct: 325 ESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLV 384
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG A IF ++ V WTA+I N G + + LF +M + V +
Sbjct: 385 DMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQA 444
Query: 245 AFVAVLTACSHAGLI 259
F VL A ++ I
Sbjct: 445 TFACVLKASANLASI 459
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 151/315 (47%), Gaps = 2/315 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+W T+I +++ + +A + +M +PD T ++L D + + H
Sbjct: 105 VVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHA 164
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
++ G N + ++L++ Y K ++ + RLF + D++S+N +I G NGL +E
Sbjct: 165 QIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEE 224
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F +M KP +F++++ A L G+Q+HG +++ F N+F+ ++ LD
Sbjct: 225 AIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLD 284
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
Y+K + R +F++M D VS+ +I A G ++I LF++++ +
Sbjct: 285 FYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFP 344
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F +L+ + + L + ++ P F ++ D+ + GK +EA +
Sbjct: 345 FPTMLSIAA-SSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRL 403
Query: 306 HAGPTENVWLTLLSA 320
+ T W ++SA
Sbjct: 404 SSRSTVP-WTAMISA 417
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+I+ Y K + + R+F + ++W ++I ++ F + K F +M + +P
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+V++ +++ C L Q H I++ G N + ++LLD Y K G + AR +F
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M D VS+ +I G A +G +AI LF +M+ G KP+ F AV++A GL D
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISAS--VGLDDT 257
Query: 262 AW 263
A+
Sbjct: 258 AF 259
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
RN F ++ I+ Y K GN+ +AR IFD D +V+WT +I + DA
Sbjct: 72 RNSFSIDIIISG-----YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFK 126
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACS 254
LF +M + G +P+ V ++ +LT C+
Sbjct: 127 LFAEMHRSGSQPDYVTYITLLTGCN 151
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 319/514 (62%), Gaps = 34/514 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN+++ G A+N +++AL+I R+M V KPD+ T++S+LP
Sbjct: 194 MQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLP----------- 242
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
A+ + NV +Y + +F L K +SWN +I+ ++N
Sbjct: 243 ------AVTNTSSENV--------LYVE--------EMFMNLEKKSLVSWNVMISVYMKN 280
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + + + QM +++P ++ +S++ AC L+ L LG+++H + R NM +
Sbjct: 281 SMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLE 340
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYA+CG + A+ +FD+M D+ SWT++I + G ++A++LF +M+ G
Sbjct: 341 NSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQS 400
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFVA+L+ACSH+GL+++ YF MT DY I P EH+A + DLLGR+G++ EAY
Sbjct: 401 PDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYN 460
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P E VW LLS+CRV+ N+++ A+K+ + P G YV+LSN YA A R
Sbjct: 461 IIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGR 520
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + ++R M+ + ++K P S +E+ N+ + F+AGD HP I E L L+ +M++
Sbjct: 521 WTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKE 580
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T LHDVEEE K+ L HSE+LAIVF I+ T + + IRI KNLRVCGDCH A
Sbjct: 581 LGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIA 639
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIVQREI++RD +RFHHF+DG CSCGDYW
Sbjct: 640 AKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%)
Query: 50 IFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
+ Y D+ K +H N +G L+ YA + +F ++P ++ I
Sbjct: 41 VLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIF 100
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
+N +I + N L+D+ L FR M+ P H ++ ++ AC+ L +G QLHG +
Sbjct: 101 YNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVF 160
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+ G D N+F+ + L+ +Y KCG + ARC+ D+M D+VSW +++ G A + DA+
Sbjct: 161 KVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALD 220
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHA 256
+ +M+ KP++ ++L A ++
Sbjct: 221 ICREMDGVRQKPDACTMASLLPAVTNT 247
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 45/325 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +++ +N +I N LY++AL + R M + PD +T VL + ++ G
Sbjct: 93 IPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIG 152
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG + GLD N+ +G+ LI +Y KC + ++ + + KD +SWNS++AG QN
Sbjct: 153 LQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQN 212
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
FD+ L R+M + KP + +S++PA + ++
Sbjct: 213 MQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS----------------------- 249
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI---MGNALHGNAHDAISLFEQMEKD 237
N+ +F ++ +VSW +I M N++ G + D L+ QM K
Sbjct: 250 ----------ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVD---LYLQMGKC 296
Query: 238 GVKPNSVAFVAVLTACS--HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
V+P+++ +VL AC A L+ + + K + P+ ++ D+ R G L
Sbjct: 297 EVEPDAITCASVLRACGDLSALLLGRRIHEYVERKK---LCPNMLLENSLIDMYARCGCL 353
Query: 296 QEAYEFISNMHAGPTENVWLTLLSA 320
++A M + W +L+SA
Sbjct: 354 EDAKRVFDRMKFRDVAS-WTSLISA 377
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/520 (41%), Positives = 329/520 (63%), Gaps = 20/520 (3%)
Query: 10 NTVIV-----GLARNGLYEEALNIVRQMGNVNLKPDSFTL---SSVLPIF---ADYVDVI 58
N VIV G RN L +L + R M + DS ++ ++ L F A D
Sbjct: 159 NPVIVTAMASGYVRNNLVYHSLELFRAM----IASDSASVVDEAAALVAFSASARVPDRG 214
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNSIIAG 116
+H + G + N + +++++ YAK +E + ++F + +D +SWNS+IA
Sbjct: 215 VTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIAL 273
Query: 117 CVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
QNG+ E + + +ML IK V+ S+++ ACAH + GK++H ++R G +
Sbjct: 274 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE 333
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+N+++ +S++DMY+KCG + +A F K+ +I+SW+A+I G +HG +A+ +F +M
Sbjct: 334 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 393
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
++ G++PN + F++VL ACSHAGL+D+ ++N+M +++GI EHY + DLLGRAG
Sbjct: 394 KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGC 453
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
L EAY I M P +W LLSACR+HKNVELA +++F +D +N G YV+LSN
Sbjct: 454 LDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNI 513
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
YA AR WKD +R+ ++ + ++K P S E+K K Y F GDKSHP + I L++L
Sbjct: 514 YAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 573
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
LERM++ GYVP+T VLHD++EE+K++ L HSE+LA+ F ++ + + I IIKNLRVC
Sbjct: 574 LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVC 633
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCHTA+KFI+KI +REII+RD RFHHF+DG CSC DYW
Sbjct: 634 SDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNV--NLKPDSFTLSSVLPIFADYVDVIKGKE 62
D+VSWN++I A+NG+ EA+ + +M NV +K ++ LS+VL A + GK
Sbjct: 263 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 322
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH +R GL+ NV +G+S+++MY+KC RVE + R F + K+ +SW+++I G +G
Sbjct: 323 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 382
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIAS 181
E L+ F +M + ++P +++F S++ AC+H L G+ + + + G + +
Sbjct: 383 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 442
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A + +M + D W A++ +H N
Sbjct: 443 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKN 485
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 131/248 (52%), Gaps = 17/248 (6%)
Query: 62 EIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H A+R GL ++ S+L++MY C+R D+ R F +P + + ++ +G V+N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 121 GLFDEGLKFFRQML------IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
L L+ FR M+ + V+FS A A + + LH I + GF+
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFS----ASARVPDRGVTASLHALIAKIGFE 229
Query: 175 DNMFIASSLLDMYAKCG--NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
N + +++LD YAK G ++ +AR +FD M+ D+VSW ++I A +G + +AI L+
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYS 288
Query: 233 QMEK--DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
+M G+K N+VA AVL AC+HAG I N + + G+ + ++ D+
Sbjct: 289 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR-MGLEENVYVGTSIVDMYS 347
Query: 291 RAGKLQEA 298
+ G+++ A
Sbjct: 348 KCGRVEMA 355
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 321/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +I G ++ G EAL++ QM + +P+ FT ++VL + G
Sbjct: 71 MRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + + + ++ +GSSL++MYAK R+ ++ +F LP +D +S +II+G Q
Sbjct: 131 RQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 190
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ F ++ + +V+++S++ A + L L GKQ+H ++R + +
Sbjct: 191 GLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQ 250
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ AR IF+ M + ++SW A+++G + HG + + LF+ M E++ V
Sbjct: 251 NSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKV 310
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG-IAPSFEHYAAVADLLGRAGKLQEA 298
KP+SV F+AVL+ CSH GL DK F+ M I EHY V DLLGRAG+++EA
Sbjct: 311 KPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEA 370
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+E I M PT +W +LL ACRVH N + V ++ I+P N G YVILSN YA+A
Sbjct: 371 FELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASA 430
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D ++R M K + K P SWIE+ + F A D+SHP + ++ELL +
Sbjct: 431 GRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKF 490
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYVPD VL+DV+EEQK+ +L HSE+LA+ FG+I T +G +R+IKNLR+C DCH
Sbjct: 491 KESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCH 550
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ R++ +RD +RFHH G CSCGDYW
Sbjct: 551 NFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 17/305 (5%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
V +G+ +H + I+ V + + LI +Y KC + + +F + ++ +SW ++I+G
Sbjct: 26 VREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISG 85
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q G E L F QML + +P +F++++ +C + LG+Q+H I + ++++
Sbjct: 86 YSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENH 145
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ SSLLDMYAK G I AR +F+ + D+VS TA+I G A G +A+ LF ++++
Sbjct: 146 IFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQR 205
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRA 292
+G+ N V + ++LTA S +D + + Y ++ D+ +
Sbjct: 206 EGMSSNYVTYASLLTALSGLAALDHG-----KQVHSHVLRCELPFYVVLQNSLIDMYSKC 260
Query: 293 GKLQEAYEFISNMHAGPTENV--WLTLLSACRVH-KNVELAG--KVAEKIFMIDPNNMGA 347
G L A + +NM P V W +L H K +E+ K+ + + P+++
Sbjct: 261 GNLNYARKIFNNM---PVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTF 317
Query: 348 YVILS 352
+LS
Sbjct: 318 LAVLS 322
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++ ++ C + + G+++H +I+ + +++++ L+ +Y KC + AR +FD+M
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++VSWTA+I G + G A +A+ LF QM + +PN F VL++C+ +
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 265 YFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQEA 298
+ + K ++E++ +++ D+ +AG++ EA
Sbjct: 133 IHSHIFKR-----NYENHIFVGSSLLDMYAKAGRIHEA 165
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 323/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSWN ++ G + +G EEA+++ M L D +T+ S++P + G
Sbjct: 183 MSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG+ IR G + + I ++L+++Y V+D+HR+F + VKD +W ++ G
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSG 302
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+D +K F +ML I +K + I+ +C+H L G+++H I+ F +N+F+
Sbjct: 303 RHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFV 362
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+++DMYA CGN+ A+ F M D+V W A+I GN ++G DAI LF QM+ G+
Sbjct: 363 GSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGL 422
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ FV+VL ACSHAG++ + F M K P+ +HYA V D+LGRAG+L AY
Sbjct: 423 DPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAY 482
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI+NM P +V+ TLL ACR+H N++L ++++KIF ++PN+ G YV+LSN YA A
Sbjct: 483 SFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAG 542
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W+ R +R+K +KK P S IE+ + Y F+AG+K HP Y +I LK L+ +++
Sbjct: 543 NWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIK 602
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP+T +L DV ++ KK++LY+HSE++AI FG++ T GT IRI KNLR C DCH+
Sbjct: 603 KAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHS 662
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KF+SK+ R ++++D +RFH F+DG CSC DYW
Sbjct: 663 ASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++VSW +I GLA+N + EA+++ R+M N KP++ T+SSVLP FA+ + K
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H + +R G + NV + ++L++MY+K + + +LF + ++ +SWN+I++G +G
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHG 202
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E + F M + + S++PA + L +G +HG IIR G++++ I +
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVK 240
+L+D+Y + A +F +M + D+ +WT ++ G + + AI F +M +K
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+S+ + +L++CSH+G + + +++ A + +AV D+ G L++A
Sbjct: 323 LDSIVLMGILSSCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKR 381
Query: 301 FISNM 305
F M
Sbjct: 382 FFYGM 386
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 117/199 (58%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I GL N + +SL+N Y C + D+ ++F P K+ +SW +I+G +N
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E + FR+M + KP V+ SS++PA A+L + + K +H +R GF+ N+F+
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY+K G + +AR +F+ M ++VSW A++ G + HG + +AI LF M + G+
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220
Query: 241 PNSVAFVAVLTACSHAGLI 259
+ ++++ A G +
Sbjct: 221 VDFYTIMSLIPASLSVGCL 239
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 322/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W+T++ G G +A+ + R+M +K D + V+ +V G
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HG+ +RHG+ +V +SL++MYAK ++ + R+F L+ ++ +SW+++I+G QN
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L+ FR M + I+P + S + AC+++ L LG+ +HG I+R FD N +
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILG 347
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ +DMY+KCG++ A+ +F+ + D++ W A+I HG DA++LF++M + G++
Sbjct: 348 TAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMR 407
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL+++ +F M + I P+ +HY + DLL R+G ++EA +
Sbjct: 408 PDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASD 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M A PT +W+ LLS C +K +EL +A+ I + P+++G ++SN YAA ++
Sbjct: 468 LLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKK 527
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ G KK P CS IE++ + FV D+SHP I + +L M +
Sbjct: 528 WDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRK 587
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P T+ V HD+EEE K+ L YHSERLAI FG++ T GT + IIKNLRVCGDCH A
Sbjct: 588 MGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDA 647
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+ISKI REI+VRD RFHHF+DG CSC DYW
Sbjct: 648 IKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 159/308 (51%), Gaps = 4/308 (1%)
Query: 17 ARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANV 76
+R G AL + R + +PDS T + L A D+ G+ + A G +V
Sbjct: 85 SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 77 CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA 136
+ SSL+++YA+ + D+ ++F +P +D ++W++++AG V G + ++ +R+M
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+K V ++ AC + +G +HG ++R+G ++ A+SL+DMYAK G + +A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+F M + VSW+A+I G A +G + +A+ LF M+ G++P+S A V+ L ACS+
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
G + S + + + A D+ + G L A + + NM + +W
Sbjct: 324 GFLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNA 380
Query: 317 LLSACRVH 324
+++ C H
Sbjct: 381 MIACCGAH 388
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/517 (42%), Positives = 321/517 (62%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
M V + V+W+ +I G EA N+ + M G L S ++S L + A D+
Sbjct: 265 MTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS--VASALRVCASLADL 322
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G ++H + G+ A++ G+SL++MYAK + ++ LF + +KD IS+ ++++G
Sbjct: 323 RMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGY 382
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG +E F++M ++P + S++PAC+HL L G+ HG +I G
Sbjct: 383 VQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALET 442
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I +SL+DMYAKCG I L+R +FDKM DIVSW +I G +HG +A +LF M+
Sbjct: 443 SICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQ 502
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G +P+ V F+ ++ ACSH+GL+ + +F++MT YGI P EHY + DLL R G L E
Sbjct: 503 GFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDE 562
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY+FI +M VW LL ACR+HKN++L +V+ I + P G +V+LSN ++A
Sbjct: 563 AYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSA 622
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R+ +AA +R+ + KG KK+P CSWIE+ +AFV GD+SHP I L +L
Sbjct: 623 AGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILID 682
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GY DT VL D+EEE+K+ L YHSE+LAI FG++ + TI + KNLRVCGDC
Sbjct: 683 IKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDC 742
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HTAIK+++ + R IIVRD +RFHHF++G+CSCGD+W
Sbjct: 743 HTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 152/304 (50%), Gaps = 8/304 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D ++N +I + G + A+++ R M + P+ +T VL + D+ G
Sbjct: 59 IPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAG 118
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH +A GL ++ + ++LI++Y +CAR + +F +P++D ++WN+++AG +
Sbjct: 119 RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANH 178
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN--- 176
G++ + M ++P + S++P A L G +H +R D N
Sbjct: 179 GMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQ 238
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ I ++LLDMYAKC ++ A +F M + + V+W+A+I G L +A +LF+ M
Sbjct: 239 VLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLV 298
Query: 237 DGVKPNSVAFVA-VLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+G+ S VA L C A L D + + +++ GI ++ + +AG
Sbjct: 299 EGMCFLSATSVASALRVC--ASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGL 356
Query: 295 LQEA 298
+ EA
Sbjct: 357 INEA 360
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ ++F +P DA ++N++I G F + +R ML ++ P +F ++ AC+
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L L G+ +H G ++F++++L+D+Y +C A +F KM + D+V+W A+
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 215 IMGNALHGNAHDAIS-LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ G A HG H AI+ L + ++ G++PN+ V++L + G + + S
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTS 222
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L+ + G + LAR +FD++ D ++ A+I + G H AI L+ M V PN
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 244 VAFVAVLTACS 254
F VL ACS
Sbjct: 100 YTFPFVLKACS 110
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/508 (40%), Positives = 320/508 (62%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT++ G +NG+ ++A+++ +M ++ ++PD FT V+ A+ ++ G +HG+ +
Sbjct: 103 WNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVV 162
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+HGL+ + + L+ MY K + + LF + +D ++WN++IA CVQ G + L+
Sbjct: 163 KHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQ 222
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FR+M +A IKP V+ S + AC HL L G++++ G D N+ + ++ LDM A
Sbjct: 223 SFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCA 282
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG++ A +FD+M +++SW+ VI G A++G + A++LF +M+ GV+PN V F+A
Sbjct: 283 KCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLA 342
Query: 249 VLTACSHAGLIDKAWSYFNSMTK--DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
VL+ACSH G +++ W YFN M + D I P EHYA + DLLGR+G L+EAY FI M
Sbjct: 343 VLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMP 402
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
+W LL AC +H+N++L VA+ +F + P +V+LSN YAAA RW
Sbjct: 403 IEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEK 462
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M+ KG +K A S +E + + GDKSHP I L++LL++M+ GY+P+
Sbjct: 463 VRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPE 522
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HDVE+E+K++ L HSE+LAI F +I IR++KNLR+CGDCHT K +S+
Sbjct: 523 TDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSR 582
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I REII+RD +RFHHF++G CSC D+W
Sbjct: 583 ITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 123/238 (51%), Gaps = 12/238 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WN +I + G +AL R+MG +KPDS T+ S L + G+EI+
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIY 259
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+A G+D+N+ + ++ ++M AKC ++ + LF +P ++ ISW+++I G NG +
Sbjct: 260 EFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESE 319
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA---- 180
+ L F +M ++P +V+F +++ AC+H ++ G Q + ++ DD
Sbjct: 320 KALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQS--DDKNIQPRKEH 377
Query: 181 -SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN----AHDAISLFE 232
+ ++D+ + G++ A M + D W A++ A+H N H A LFE
Sbjct: 378 YACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFE 435
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW+TVI G A NG E+AL + +M N ++P+ T +VL + V +G
Sbjct: 297 MPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEG 356
Query: 61 KEIHGYAIRHGLDANVCIG----SSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
+ + + D N+ + ++++ + +E+++ ++P++ D W +++
Sbjct: 357 WQYFNFMAQSD-DKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLG 415
Query: 116 GCV--QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
C QN + + L +I HV S++ A
Sbjct: 416 ACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAA 453
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/517 (42%), Positives = 317/517 (61%), Gaps = 6/517 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D S NTV+ A + AL + R+ PD+ T +L + + +G
Sbjct: 83 LPDPDPFSLNTVLRIAASSAHPRIALALHRRR---LAPPDTHTYPPLLQACTRLLALREG 139
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCV 118
+ +H A ++GL A V + +SL++ Y C E +HR+F +PV ++ +SWNS++ G
Sbjct: 140 ESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFA 199
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG +E L FR+ L A + P + S++ ACA + L LG+++H + G N
Sbjct: 200 ANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSH 259
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+D+YAKCG + A +F++M + +VSWT++I+G A +G DA+ LF ME++
Sbjct: 260 VGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERE 319
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ P + V VL ACSH GL+D + YFN M YGIAP EH + DLLGRAG+++E
Sbjct: 320 RLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEE 379
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A+ +I+ M P VW TLL AC +HK +EL ++ +DP + G YV+LSN YAA
Sbjct: 380 AHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAA 439
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
RW DA LR M G++K P S +E++N Y FV GD+SHP +I + L E+ ER
Sbjct: 440 VGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAER 499
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ +GYVP T VL D+EEE+K+ L YHSERLAI F ++ + G+ IRI+KNLR+CGDC
Sbjct: 500 LRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDC 559
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H IK ISK+ REIIVRD SRFHHF+ G+CSC DYW
Sbjct: 560 HLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 6/223 (2%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
L CLLP D S N+++ + L R+ L P ++ ++ AC L
Sbjct: 79 LSCLLPDPDPFSLNTVLRIAASSAHPRIALALHRRRL---APPDTHTYPPLLQACTRLLA 135
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVI 215
L G+ LH +NG +F+ +SL+ Y CG A +FD++ + ++VSW +V+
Sbjct: 136 LREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVM 195
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G A +G ++ +++F + + + P+ V+VLTAC+ G + + G+
Sbjct: 196 NGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLG-RRVHVFASKVGL 254
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLL 318
+ A+ DL + G +++A++ M T W +L+
Sbjct: 255 VGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLI 297
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/510 (41%), Positives = 325/510 (63%), Gaps = 15/510 (2%)
Query: 15 GLARNGLYEEALNIVRQMGNVNLKPDSFTL---SSVLPIF---ADYVDVIKGKEIHGYAI 68
G RN L +L + R M + DS ++ ++ L F A D +H
Sbjct: 170 GYVRNNLVYHSLELFRAM----IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIA 225
Query: 69 RHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ G + N + +++++ YAK +E + ++F + +D +SWNS+IA QNG+ E
Sbjct: 226 KIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEA 284
Query: 127 LKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + +ML IK V+ S+++ ACAH + GK++H ++R G ++N+++ +S++
Sbjct: 285 IGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIV 344
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG + +A F K+ +I+SW+A+I G +HG +A+ +F +M++ G++PN +
Sbjct: 345 DMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYI 404
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++VL ACSHAGL+D+ ++N+M +++GI EHY + DLLGRAG L EAY I
Sbjct: 405 TFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKE 464
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W LLSACR+HKNVELA +++F +D +N G YV+LSN YA AR WKD
Sbjct: 465 MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDV 524
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R+ ++ + ++K P S E+K K Y F GDKSHP + I L++LLERM++ GYV
Sbjct: 525 ERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYV 584
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T VLHD++EE+K++ L HSE+LA+ F ++ + + I IIKNLRVC DCHTA+KFI
Sbjct: 585 PNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFI 644
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KI +REII+RD RFHHF+DG CSC DYW
Sbjct: 645 TKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNV--NLKPDSFTLSSVLPIFADYVDVIKGKE 62
D+VSWN++I A+NG+ EA+ + +M NV +K ++ LS+VL A + GK
Sbjct: 264 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 323
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH +R GL+ NV +G+S+++MY+KC RVE + R F + K+ +SW+++I G +G
Sbjct: 324 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 383
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIAS 181
E L+ F +M + ++P +++F S++ AC+H L G+ + + + G + +
Sbjct: 384 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 443
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A + +M + D W A++ +H N
Sbjct: 444 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKN 486
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/516 (40%), Positives = 321/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+W+ ++ ARNG EAL + RQM + P+ TL S L A D+ G
Sbjct: 137 MSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSG 196
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H G+ + V +G++L+N+Y KC R+E + F + K+ ++W++I A +N
Sbjct: 197 ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARN 256
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI--IRNGFDDNMF 178
+ ++ +M + + P +F S++ ACA + L G+++H I + G + +++
Sbjct: 257 DRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVY 316
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L++MY+KCGN+ LA +FDK+ D+V W ++I NA HG A+ LFE+M +G
Sbjct: 317 VLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEG 376
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P + F +VL ACSHAG++D+ +F S D+GI P EH+ + DLLGRAG + ++
Sbjct: 377 LQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDS 436
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ + +M P W+ L ACR ++N++ A AE +F +DP YV+LSN YA A
Sbjct: 437 EDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKA 496
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D A +R M+ K SWIEVK++ + F++GD HP I+ L+ L + M
Sbjct: 497 GRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLM 556
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPDT+ VLHDV++E K+ ++ YHSE+LA+ F ++ TP+G+ IR++KNLRVC DCH
Sbjct: 557 KAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCH 616
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFISK+V REI+VRD +RFH F++G CSCGDYW
Sbjct: 617 TASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 125/250 (50%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ SW ++ A N ++ R M + P +S L D ++ G+ I
Sbjct: 40 NVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQ 99
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G++ + ++L+++Y K D+ +F + +D ++W++++A +NG
Sbjct: 100 LAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPR 159
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FRQM + + P V+ S + ACA L L G +H + G + + ++L+
Sbjct: 160 EALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALV 219
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
++Y KCG I A F ++ ++V+W+A+ A + DAI + +M+ +G+ PNS
Sbjct: 220 NLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNST 279
Query: 245 AFVAVLTACS 254
FV+VL AC+
Sbjct: 280 TFVSVLDACA 289
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LI++Y KC R +D+ +F + K+ SW ++A +N FD FFR ML+ I P
Sbjct: 16 LIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPG 75
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
V S + AC + +G+ + I+ G ++ + ++L+ +Y K G+ A +F
Sbjct: 76 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFL 135
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M D+V+W+A++ A +G+ +A+ LF QM+ DGV PN V V+ L AC+ G + +
Sbjct: 136 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL-R 194
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + + + GI A+ +L G+ G+++ A E
Sbjct: 195 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAE 233
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G+ N F+ + L+D+Y KC A +F + ++ SWT ++ A + + F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHA 256
M G+ P V L+AC+ A
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDA 89
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/515 (41%), Positives = 318/515 (61%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SW T+I G A+N + EA+N+ R++ + D + SVL +
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIHGY + L A++ + ++++N+Y + + + R F + KD +SW S+I CV N
Sbjct: 470 REIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN 528
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F + I+P ++ S + A A+L++L GK++HG +IR GF IA
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMYA CG + +R +F + D++ WT++I N +HG ++AI+LF++M + V
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVI 648
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+A+L ACSH+GL+ + +F M Y + P EHYA + DLL R+ L+EAY+
Sbjct: 649 PDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQ 708
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ +M P+ VW LL AC +H N EL A+++ D N G Y ++SN +AA R
Sbjct: 709 FVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGR 768
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM-E 419
W D +R+ M+ G+KK P CSWIEV NK + F+A DKSHP I L + + + +
Sbjct: 769 WNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGK 828
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+ TK V H+V EE+K +LY HSERLA+ +G++ TP GT+IRI KNLR+C DCHT
Sbjct: 829 KGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHT 888
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K S++ QR ++VRD +RFHHFE G CSCGD+W
Sbjct: 889 FFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 147/254 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G EAL++ R+M V + +++T + L D V G
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IHG A++ A+V + ++LI MYAKC R+ED+ R+F + +D +SWN++++G VQN
Sbjct: 268 MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQN 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ + L +FR M + KP VS +++ A L GK++H IRNG D NM I
Sbjct: 328 ELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIG 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKC ++ F+ M D++SWT +I G A + +AI+LF +++ G+
Sbjct: 388 NTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMD 447
Query: 241 PNSVAFVAVLTACS 254
+ + +VL ACS
Sbjct: 448 VDPMMIGSVLRACS 461
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 155/262 (59%), Gaps = 1/262 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWNT++ GL +N LY +ALN R M N KPD ++ +++ +++ G
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNG 368
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H YAIR+GLD+N+ IG++LI+MYAKC V+ F + KD ISW +IIAG QN
Sbjct: 369 KEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQN 428
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + FR++ + + + S++ AC+ L + + +++HG + + D M +
Sbjct: 429 ECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM-LQ 487
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++++Y + G+ AR F+ + DIVSWT++I +G +A+ LF +++ ++
Sbjct: 488 NAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQ 547
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P+S+A ++ L+A ++ + K
Sbjct: 548 PDSIAIISALSATANLSSLKKG 569
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 139/264 (52%), Gaps = 6/264 (2%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H ++ L A + + L++MY KC ++D+ ++F + + +WN+++ V
Sbjct: 64 QGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFV 121
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+G + E ++ +++M + + +F S++ AC L LG ++HG ++ GF + +F
Sbjct: 122 SSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVF 181
Query: 179 IASSLLDMYAKCGNIRLARCIFDK--MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++L+ MY KCG++ AR +FD M+ D VSW ++I + G +A+SLF +M++
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQE 241
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV N+ FVA L + + K A + A +A + + G+++
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIA-MYAKCGRME 300
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
+A ++M + W TLLS
Sbjct: 301 DAERVFASMLCRDYVS-WNTLLSG 323
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 2/259 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +WN ++ +G Y EA+ + ++M + + D+ T SVL + G
Sbjct: 105 MTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
EIHG A++ G V + ++LI MY KC + + LF ++ +D +SWNSII+ V
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G E L FR+M + +F + + + + LG +HG +++ +++
Sbjct: 225 TEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVY 284
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A++L+ MYAKCG + A +F M D VSW ++ G + DA++ F M+
Sbjct: 285 VANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSA 344
Query: 239 VKPNSVAFVAVLTACSHAG 257
KP+ V+ + ++ A +G
Sbjct: 345 QKPDQVSVLNLIAASGRSG 363
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/514 (39%), Positives = 323/514 (62%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W+T++ G G +A+ + R+M +K D + V+ +V G
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HG+ +RHG+ +V +SL++MYAK ++ + R+F L+ ++ +SW+++I+G QN
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L+ FR M + I+P + S + AC+++ L LG+ +HG I+R FD N +
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILG 347
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ +DMY+KCG++ A+ +F+ + D++ W A+I HG DA++LF++M + G++
Sbjct: 348 TAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMR 407
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL+++ +F M + I P+ +HY + DLL R+G ++EA +
Sbjct: 408 PDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASD 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M A PT +W+ LLS C +K +EL +A+ I + P+++G ++SN YAA ++
Sbjct: 468 LLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKK 527
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ G KK P CS IE++ +AF+ D+SHP I + +L M +
Sbjct: 528 WDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRK 587
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P T+ V HD+EEE K+ L YHSE+LAI FG++ T GT + IIKNLRVCGDCH A
Sbjct: 588 MGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDA 647
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+ISKI REI+VRD RFHHF+DG CSC DYW
Sbjct: 648 IKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 159/308 (51%), Gaps = 4/308 (1%)
Query: 17 ARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANV 76
+R G AL + R + +PDS T + L A D+ G+ + A G +V
Sbjct: 85 SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 77 CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA 136
+ SSL+++YA+ + D+ ++F +P +D ++W++++AG V G + ++ +R+M
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+K V ++ AC + +G +HG ++R+G ++ A+SL+DMYAK G + +A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+F M + VSW+A+I G A +G + +A+ LF M+ G++P+S A V+ L ACS+
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
G + S + + + A D+ + G L A + + NM + +W
Sbjct: 324 GFLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNA 380
Query: 317 LLSACRVH 324
+++ C H
Sbjct: 381 MIACCGAH 388
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 313/541 (57%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN +I G R+ ++E++ + +M + + P S TL SVL + D+ GK +H
Sbjct: 184 DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH 243
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDS----------------------------- 95
Y ++ + ++LI+MYA C ++ +
Sbjct: 244 RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVG 303
Query: 96 --HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
F +P +D +SW ++I G +Q F E L FR+M A IKP + SI+ ACA
Sbjct: 304 LARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACA 363
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
HL L LG+ + I +N + F+ ++L+DMY CGN+ A IF+ M D +SWTA
Sbjct: 364 HLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTA 423
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
VI G A++G +A+ +F QM K + P+ V + VL AC+H+G++DK +F MT +
Sbjct: 424 VIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQH 483
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P+ HY + DLLGRAG L+EA+E I NM P VW +LL ACRVH++ E+A
Sbjct: 484 GIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMA 543
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A++I ++P N YV+L N YAA RW+ +R M ++G+KKTP CS IE+ +
Sbjct: 544 AQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHE 603
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
FVAGD+ HP I L E+ ++ GY PDT EV D+ EE+K++ +Y HSE+LAI
Sbjct: 604 FVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIA 663
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG+I + G TIRI+KNLR+C DCH K +SK+ RE+IVRD +RFHHF G CSC DY
Sbjct: 664 FGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDY 723
Query: 514 W 514
W
Sbjct: 724 W 724
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 2/223 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G + ++E L++ R+M N+KPD FT+ S+L A + G
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y ++ + + +G++LI+MY C VE + R+F +P +D ISW ++I G N
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNMFI 179
G +E L F QML A I P V+ ++ AC H + GK+ ++G + N+
Sbjct: 432 GYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAH 491
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
++D+ + G+++ A + M + + + W +++ +H
Sbjct: 492 YGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 149/319 (46%), Gaps = 7/319 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAK--CARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K+IH I GL +N + + +I K +E + +F +P + WN++I G
Sbjct: 36 KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G + + + +ML + P ++ ++ T + G++LH I++ GF N+F
Sbjct: 96 RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ +Y+ G + +AR +FD+ D+V+W +I G +++ LF++ME+
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V P+S+ V+VL+ACS ++ + KD I P A+ D+ G + A
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVG-KRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
NM + + W +++ V LA +K + + ++ + + Y
Sbjct: 275 LGIFDNMKSRDVIS-WTAIVTGFTNLGQVGLARNYFDK---MPERDFVSWTAMIDGYLQV 330
Query: 359 RRWKDAASLRVFMRNKGMK 377
R+K+ SL M+ +K
Sbjct: 331 NRFKEVLSLFREMQAANIK 349
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 320/513 (62%), Gaps = 8/513 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHGY 66
WN +I G A+ G+ EEAL + +M P T++SVLP A + GKE +HGY
Sbjct: 343 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS-EAFAGKEAVHGY 401
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G+ N + ++L++MYA+ + + + R+F ++ + D +SWN++I GCV G +
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461
Query: 127 LKFFRQMLI---AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ R+M + P ++ +++P CA L GK++HG +R+ D ++ + S+L
Sbjct: 462 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 521
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPN 242
+DMYAKCG + L+R +FD++ + ++W +IM +HG +A LF++M G +PN
Sbjct: 522 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 581
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V F+A L ACSH+G++D+ F++M +D+G+ P+ + A V D+LGRAG+L EAY +
Sbjct: 582 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 641
Query: 303 SNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
++M AG + + W T+L ACR+H+NV L E++ ++P YV+L N Y+AA +W
Sbjct: 642 TSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQW 701
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
AA +R MR +G+ K P CSWIEV + F+AG+ +HP ++ ++ L M
Sbjct: 702 TRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR 761
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VLHD+++ K +L HSE+LAI FG++ G TIR+ KNLRVC DCH A
Sbjct: 762 GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAA 821
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+V REI++RD RFHHF +G+CSCGDYW
Sbjct: 822 KFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 181/353 (51%), Gaps = 14/353 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP----IFADYVDVIKG 60
D VS+N++I L ++ AL +R M SFTL SVL + A V G
Sbjct: 126 DAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLG 185
Query: 61 KEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHRLFC-LLPVK-DAISWNSIIAG 116
+E H +A+++GL ++L++MYA+ V D+ RLF P + D ++WN++++
Sbjct: 186 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 245
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDD 175
VQ+G+FDE ++ M+ ++P V+F+S +PAC+ L L +G+++H +I++
Sbjct: 246 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 305
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
N F+AS+L+DMYA + AR +FD + + W A+I G A G +A+ LF +
Sbjct: 306 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 365
Query: 234 MEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
ME + G P +VL AC+ + + + K G+A + A+ D+ R
Sbjct: 366 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK-RGMAGNRFVQNALMDMYARL 424
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM 345
GK A + M P W TL++ C V +V A ++A ++ ++ +
Sbjct: 425 GKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 476
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 17/298 (5%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL--DANVCIGSSLINMYAKC 89
M + + D L + A D + IH A+R GL + + ++L+ YA+C
Sbjct: 48 MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107
Query: 90 ARVEDSHRLFCLL--PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
R+ + +F + DA+S+NS+I+ +D L R ML + S
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 167
Query: 148 IMPACAHL----TTLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFD 201
++ A +HL + LG++ H ++NG F ++LL MYA+ G + A+ +F
Sbjct: 168 VLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFA 227
Query: 202 KMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
D+V+W ++ G +A+ M GV+P+ V F + L ACS L+
Sbjct: 228 GATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELL 287
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMHAGPTENVW 314
D + KD +A + +A+ D+ + GK ++ ++ + + +G +W
Sbjct: 288 DVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD--SGKQLGMW 343
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/516 (39%), Positives = 322/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+W+ ++ ARNG EAL + RQM + P+ TL S L A D+ G
Sbjct: 122 MSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSG 181
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H G+ + V +G++L+N+Y KC R+E + F + K+ ++W++I A +N
Sbjct: 182 ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARN 241
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH--GCIIRNGFDDNMF 178
+ ++ +M + + P +F S++ ACA + L G+++H ++ G + +++
Sbjct: 242 DRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVY 301
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L++MY+KCGN+ LA +FDK+ D+V W ++I NA HG A+ LFE+M +G
Sbjct: 302 VLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEG 361
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P + F +VL ACSHAG++D+ +F S D+GI P EH+ + DLLGRAG + ++
Sbjct: 362 LQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDS 421
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ + +M P W+ L ACR ++N++ A AE +F +DP YV+LSN YA A
Sbjct: 422 EDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKA 481
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D A +R M+ K SWIEVK++ + F++GD HP I+ L+ L + M
Sbjct: 482 GRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLM 541
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++ GYVPDT+ VLHDV++E K+ ++ YHSE+LA+ F ++ TP+G+ IR++KNLRVC DCH
Sbjct: 542 KEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCH 601
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFISK+V REI+VRD +RFH F++G CSCGDYW
Sbjct: 602 TASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV+D+VSWN +I N ++ R M + P +S L D ++ G
Sbjct: 21 MPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIG 80
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I + G++ + ++L++MY K D+ +F + +D ++W++++A +N
Sbjct: 81 RSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARN 140
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L FRQM + + P V+ S + ACA L L G +H + G + +
Sbjct: 141 GHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVG 200
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+++Y KCG I A F ++ ++V+W+A+ A + DAI + +M+ +G+
Sbjct: 201 TALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLV 260
Query: 241 PNSVAFVAVLTACS 254
PNS FV+VL AC+
Sbjct: 261 PNSTTFVSVLDACA 274
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+++ Y++ + + F +PV D +SWN++IA + N FD FFR ML+ I P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
V S + AC + +G+ + I+ G ++ + ++L+ MY K G+ A +F
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M D+V+W+A++ A +G+ +A+ LF QM+ DGV PN V V+ L AC+ G + +
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL-R 179
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + + + GI A+ +L G+ G+++ A E
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVE 218
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 326/543 (60%), Gaps = 39/543 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ S++ +I ++ L++ A QM + ++P++FT SSVL + GK +H
Sbjct: 109 NVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVL----KSCSLESGKVLH 164
Query: 65 GYAIRHGLDANVCIGSSLINMYAK-----CAR--------------------------VE 93
AI+ GL +++ + + L+++YA+ CAR ++
Sbjct: 165 CQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD 224
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ LF + +D + WN +I G Q+G+ +E LK FR+ML+AK P V+ +++ AC
Sbjct: 225 KARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACG 284
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L G+ +H I G N+ + ++L+DMY+KCG++ AR +FD++ D+V+W +
Sbjct: 285 QLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNS 344
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I+G A+HG + A+ LFE+M + G KP + F+ +L+AC H GL+++ S+F M Y
Sbjct: 345 MIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKY 404
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P EHY + +LLGRAG L+EAY + NM +W TLL CR+H N++L ++
Sbjct: 405 GIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEI 464
Query: 334 AEKIFMIDPN--NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
A+ F++D N G YV+LSN YAA W+ A +R M+ G++K CS IEV NK
Sbjct: 465 AK--FLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKV 522
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLA 451
+ FVAG++ HP I L E+ ++ GY P T VLHD+ EEQK+ L HSE+LA
Sbjct: 523 HEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLA 582
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I FG+I T GTT++I+KNLRVC DCHT +K IS+I R+I++RD +RFHHFEDG CSCG
Sbjct: 583 IAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCG 642
Query: 512 DYW 514
DYW
Sbjct: 643 DYW 645
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 40/283 (14%)
Query: 51 FADYVDVIKGK----EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
FA +D K +IH +R GL N + L YA R++ S +F +
Sbjct: 50 FASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPN 109
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
S+++II VQ+ LFD ++ QML ++P +FSS++ +C +L GK LH
Sbjct: 110 VFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHC 165
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK------------------------ 202
I+ G ++++ + L+D+YA+ G++ AR +FDK
Sbjct: 166 QAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDK 225
Query: 203 -------MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
M D+V W +I G A G ++++ LF +M PN V +AVL+AC
Sbjct: 226 ARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQ 285
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
G ++ + +S ++ GI + A+ D+ + G L++A
Sbjct: 286 LGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDA 327
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 8/239 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V WN +I G A++G+ E+L + R+M P+ T+ +VL + G
Sbjct: 233 MKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESG 292
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH Y G+ NV +G++LI+MY+KC +ED+ +F + KD ++WNS+I G +
Sbjct: 293 RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMH 352
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMF 178
G L+ F +M KP ++F I+ AC H + G+ ++R+ G + +
Sbjct: 353 GFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR-LMRDKYGIEPKIE 411
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++++ + G++ A + M + D V W ++ LH N I L E++ K
Sbjct: 412 HYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVN----IKLGEEIAK 466
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 322/562 (57%), Gaps = 48/562 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + SWN + G +R + +++ +M N+KPD +T + F V + G
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA------------------------------ 90
+E+H + +++GLD+NV ++LINMY+ C
Sbjct: 134 RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRI 193
Query: 91 ------------------RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+V+ + + F +P +D +SW ++I G ++ + E L FR+
Sbjct: 194 KKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFRE 253
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M +KIKP + S++ ACA L L LG+ + I +N ++ F+ ++L+DMY KCGN
Sbjct: 254 MQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGN 313
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ +A IF+ + D +WTA+++G A++G +A+++F QM K V P+ V +V VL+A
Sbjct: 314 VEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSA 373
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
C+H G++D+ +F SMT +GI P+ HY + DLLG+AG L+EA+E I NM P
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSI 433
Query: 313 VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
VW LL ACR+HK+ E+A + E+I ++PNN YV+ N YAA +W LR M
Sbjct: 434 VWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMM 493
Query: 373 NKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLH 432
++G+KKTP CS IE+ + FVAGD+SHP I L ++ ++ GY P+T EV
Sbjct: 494 DRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFL 553
Query: 433 DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREI 492
D+ EE K+N +Y HSE+LAI FG+I + G TIRI+KNLR+C DCH K +SK+ RE+
Sbjct: 554 DIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREV 613
Query: 493 IVRDNSRFHHFEDGKCSCGDYW 514
IVRD +RFHHF G CSC DYW
Sbjct: 614 IVRDRTRFHHFRHGSCSCKDYW 635
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/511 (40%), Positives = 324/511 (63%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D++SWN +I +NGL +EAL++ + M + + TL + + A +G+ +
Sbjct: 90 ADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIV 149
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A+ L+++ +G+SL+NM+ KC V+ + +F LP K+ ++WN+++A QN
Sbjct: 150 HAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQC 209
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ ++ FR M + ++P V+F +I+ ACA L G+ +H I +G ++ + +++
Sbjct: 210 KKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAV 269
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ Y KCG + AR IFD + + V+W+A++ A +G +AI L+ +M + G++ N
Sbjct: 270 MHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNG 329
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ F+ +L ACSHAG YF SM +D+G+ P FEHY + DLLGR+G+LQ + + I+
Sbjct: 330 ITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLIN 389
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M P + WL LL ACR+H +V+ ++AE I+ +DP + G Y++LSN Y++ R +
Sbjct: 390 SMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDE 449
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
A R MR +G+ K P S IEVK++ + F+A K HP RI+ ++ L R+++ GY
Sbjct: 450 ARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGY 509
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V D + VL DVEEE+K+ LL+YHSERLAI FG+I TP GT + I+KNLRVC DCH A+K
Sbjct: 510 VADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKA 569
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+V R+I+VRD RFHHFE+G CSCGDYW
Sbjct: 570 ISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 4/271 (1%)
Query: 52 ADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAIS 109
AD +++GK +H ++ G ++ I + LI MY KC + ++ +F + K D IS
Sbjct: 35 ADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVIS 94
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
WN II QNGL E L F+ M + + V+ + + ACA L + G+ +H +
Sbjct: 95 WNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAV 154
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+ + + +SL++M+ KC N+ AR +FD + ++V+W ++ + + AI
Sbjct: 155 DKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQ 214
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
+F M+ +GV+P++V F+ ++ AC+ + + +T GI AV
Sbjct: 215 VFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS-GIPMDVALGTAVMHFY 273
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
G+ G+L A ++ T W +L+A
Sbjct: 274 GKCGRLDNARAIFDSLGKKNTVT-WSAILAA 303
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 134/265 (50%), Gaps = 5/265 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +LV+WN ++ ++N ++A+ + R M ++PD+ T +++ A +G
Sbjct: 188 LPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEG 247
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H G+ +V +G+++++ Y KC R++++ +F L K+ ++W++I+A QN
Sbjct: 248 RMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQN 307
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ + +M+ ++ ++F ++ AC+H G +IR+ G
Sbjct: 308 GYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEH 367
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM-EKD 237
+L+D+ + G ++L+ + + M D +W A++ +HG+ + E + E D
Sbjct: 368 YLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELD 427
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKA 262
+S ++ + S G +D+A
Sbjct: 428 --PEDSGPYILLSNLYSSTGRMDEA 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ ++ CA L GK++H C++++G+ + IA+ L++MY KCG I AR +FD++
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85
Query: 204 DLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
D++SW +I +G +A+ LF+ M+ +GV N V + + AC+
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACA 138
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 307/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP VSW +I G EA+++ R ++PDSFT VL A D+ G
Sbjct: 132 MPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATG 191
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A + G+ +V + ++ +++Y KC + + +F + KDA++W +++ G N
Sbjct: 192 ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASN 251
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M ++P + + + AC L L LG+Q + + F DN +
Sbjct: 252 GHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 311
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+ A +F +M DI+ W A+I+G + G+ A +L QMEK GVK
Sbjct: 312 TALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK 371
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N F+ +L +C+H GLI YF++MTK Y I+P EHY + DLL RAG LQEA++
Sbjct: 372 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQ 431
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M + LL C++H+N ELA V ++ ++P N G YV+LSN Y+ R
Sbjct: 432 LIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGR 491
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA LR+ M+ KG++K PACSW+E + K + F GDKSHP +I + L EL M+
Sbjct: 492 WEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKT 551
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ V+ DVE+E+K++ L +HSE+LAI F ++ T G TIR+ KNLRVC DCHTA
Sbjct: 552 MGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTA 611
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS+I REIIVRDN+RFH F DG CSC DYW
Sbjct: 612 IKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 109/201 (54%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H +++ N + +SL+ +YA+C + + R+F +P +SW ++I +
Sbjct: 90 GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 149
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E + R ++P + ++ ACA + L G+ + + G ++F+
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 209
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++ +D+Y KCG + AR +FDKM D V+W A++ G A +G+ +A+ LF M+ +GV
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 269
Query: 240 KPNSVAFVAVLTACSHAGLID 260
+P+ A L+AC+ G +D
Sbjct: 270 RPDCYAVAGALSACTRLGALD 290
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 140 PRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P H++F + + + L L G+QLH ++ N + +SLL +YA+CG + A+
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD+M VSWTA+I G+ +A+ + +G++P+S V VLTAC+
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + + ++ GIA S A DL + G++ +A E M
Sbjct: 188 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 327/541 (60%), Gaps = 33/541 (6%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
LV++N +I G G Y+EAL +VR+M + ++ D FT SV+ A + GK++H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV------- 118
Y +R D + +SL+++Y KC + +++ +F +P KD +SWN++++G V
Sbjct: 311 YVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 119 ------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+NG +EGLK F M +P +FS + +CA
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L G+Q H +++ GFD ++ ++L+ MYAKCG + AR +F M D VSW A+
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I HG+ +A+ ++E+M K G++P+ + + VLTACSHAGL+D+ YF+SM Y
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
I P +HYA + DLL R+GK +A I ++ PT +W LLS CRVH N+EL A
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
+K+F + P + G Y++LSN +AA +W++ A +R MR++G+KK ACSWIE++ + + F
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEE-QKKNLLYYHSERLAIV 453
+ D SHP + L++L + M + GYVPDT VLHDVE + K+++L HSE++A+
Sbjct: 670 LVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVA 729
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG++ P GTTIRI KNLR CGDCH +F+S +VQR+II+RD RFHHF +G+CSCG++
Sbjct: 730 FGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNF 789
Query: 514 W 514
W
Sbjct: 790 W 790
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 181/420 (43%), Gaps = 73/420 (17%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG-K 61
+ D V +N +I G + N A+N+ +M + KPD+FT +SVL A D K
Sbjct: 110 MRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV 169
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCAR----VEDSHRLFCLLPVKDAISWNSIIAGC 117
+ H A++ G + ++L+++Y+KCA + + ++F + KD SW +++ G
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 118 VQNGLFD--------------------------------EGLKFFRQMLIAKIKPRHVSF 145
V+NG FD E L+ R+M+ + I+ ++
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S++ ACA L LGKQ+H ++R D + +SL+ +Y KCG AR IF+KM
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 206 HDIVSWTAV-------------------------------IMGNALHGNAHDAISLFEQM 234
D+VSW A+ I G A +G + + LF M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+++G +P AF + +C+ G Y + K G S A+ + + G
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGV 467
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
++EA + M + + W L++A H + A V E++ I P+ + +L+
Sbjct: 468 VEEARQVFRTMPCLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 10/229 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +I GLA NG EE L + M +P + S + A G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H ++ G D+++ G++LI MYAKC VE++ ++F +P D++SWN++IA Q+
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-----IRNGFDD 175
G E + + +ML I+P ++ +++ AC+H + G++ + I G D
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ L+D+ + G A + + + W A++ G +HGN
Sbjct: 557 ----YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 56/267 (20%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK-------------------------- 189
T+L L + +HG II GF I + L+D+Y K
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 190 -----CGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
G+I LAR +F+K + D V + A+I G + + + + AI+LF +M+ +G KP+
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 243 SVAFVAVLTACS------------HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
+ F +VL + HA + Y S++ + + A+ LL
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN--ALVSVYSKCASSPSLLH 205
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
A K+ + E + E W T+++ + +L ++ E M D + AY
Sbjct: 206 SARKVFD--EILEK-----DERSWTTMMTGYVKNGYFDLGEELLEG--MDDNMKLVAYNA 256
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMK 377
+ + Y +++A + M + G++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIE 283
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 50/284 (17%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+++++ Y + + +F PV +D + +N++I G N + F +M
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 138 IKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN---- 192
KP + +F+S++ A + Q H +++G ++++L+ +Y+KC +
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMG--------------------------NAL------ 220
+ AR +FD++ D SWT ++ G NA+
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID--KAWSYFNSMTKDYGIAPS 278
G +A+ + +M G++ + + +V+ AC+ AGL+ K + +D+ S
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF----S 319
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
F ++ L + GK EA M P +++ W LLS
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKM---PAKDLVSWNALLSG 360
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 318/543 (58%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G + G EEAL + ++M N +P+ T+ VL A +D+ G+
Sbjct: 196 DIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWAC 255
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC------------------------ 100
Y R+G+D N+ + +++++MY KC +ED+ RLF
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315
Query: 101 -------LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPAC 152
++P +D +WN++I+ QNG E L FR++ + K KP V+ +S + AC
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A L + LG +H I + G N I +SL+DMY+KCG++ A +F ++ D+ W+
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G A+HG+ AI LF +M++ VKPN+V F +L ACSH+GL+D+ +FN M
Sbjct: 436 AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YG+ P +HYA + D+LGRAG L+EA E I M P+ +VW LL ACR++ NVELA
Sbjct: 496 YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEM 555
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
++ D NN GAYV+LSN YA A +W + LR M+ G++K P CS IEV +
Sbjct: 556 ACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIH 615
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEE-QKKNLLYYHSERLA 451
F+ GD SHP I L E++ R++ GYV D +L VEEE K++ L HSE+LA
Sbjct: 616 EFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLA 675
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I +G+I IRI+KNLRVCGDCH+ K ISK+ R+I++RD RFHHF G CSC
Sbjct: 676 IAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCM 735
Query: 512 DYW 514
DYW
Sbjct: 736 DYW 738
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 41/380 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIK 59
+P +L +WNT+I A + + L + QM + + + P+S+T V+ + ++
Sbjct: 90 IPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLA 149
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG ++ +++ I +SLI+ Y+ ++ ++ +F + KD +SWNS+I+G VQ
Sbjct: 150 GQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQ 209
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E L+ F++M + +P V+ ++ ACA L G+ I RNG D N+ +
Sbjct: 210 GGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLIL 269
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG---------------------- 217
++++LDMY KCG++ AR +FDKM+ DIVSWT +I G
Sbjct: 270 SNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDI 329
Query: 218 ---NAL------HGNAHDAISLFEQME-KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
NAL +G +A+++F +++ KPN V + L AC+ G +D + +
Sbjct: 330 TAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIH 388
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKN- 326
K GI +F ++ D+ + G L++A E ++ VW +++ +H +
Sbjct: 389 VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDV-FVWSAMIAGLAMHGHG 447
Query: 327 ---VELAGKVAEKIFMIDPN 343
++L K+ E + PN
Sbjct: 448 RAAIDLFSKMQET--KVKPN 465
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 26/345 (7%)
Query: 46 SVLPIFADYVDVIKG-KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH-----RLF 99
S +PI D K K++H + +R GL + S ++ CA S ++F
Sbjct: 31 STVPILIDKCANKKHLKQLHAHMLRTGLFFD---PPSATKLFTACALSSPSSLDYACKVF 87
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK-PRHVSFSSIMPACAHLTTL 158
+P + +WN++I + +GL F QML + P +F ++ A +++L
Sbjct: 88 DQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSL 147
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G+ +HG +++ F ++FI++SL+ Y+ G++ A +F K+ DIVSW ++I G
Sbjct: 148 LAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGF 207
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY----G 274
G+ +A+ LF++M+ + +PN V V VL+AC A ID F DY G
Sbjct: 208 VQGGSPEEALQLFKRMKMENARPNRVTMVGVLSAC--AKRIDLE---FGRWACDYIERNG 262
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
I + A+ D+ + G L++A M + W T++ + + A
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVS-WTTMIDGYAKVGDYD----AA 317
Query: 335 EKIFMIDP-NNMGAYVILSNTYAAARRWKDA-ASLRVFMRNKGMK 377
++F + P ++ A+ L ++Y + K+A A R NK K
Sbjct: 318 RRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTK 362
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 307/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP VSW +I G EA+++ R ++PDSFT VL A D+ G
Sbjct: 179 MPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATG 238
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A + G+ +V + ++ +++Y KC + + +F + KDA++W +++ G N
Sbjct: 239 ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASN 298
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M ++P + + + AC L L LG+Q + + F DN +
Sbjct: 299 GHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 358
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+ A +F +M DI+ W A+I+G + G+ A +L QMEK GVK
Sbjct: 359 TALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK 418
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N F+ +L +C+H GLI YF++MTK Y I+P EHY + DLL RAG LQEA++
Sbjct: 419 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQ 478
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M + LL C++H+N ELA V ++ ++P N G YV+LSN Y+ R
Sbjct: 479 LIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGR 538
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA LR+ M+ KG++K PACSW+E + K + F GDKSHP +I + L EL M+
Sbjct: 539 WEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKT 598
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ V+ DVE+E+K++ L +HSE+LAI F ++ T G TIR+ KNLRVC DCHTA
Sbjct: 599 MGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTA 658
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS+I REIIVRDN+RFH F DG CSC DYW
Sbjct: 659 IKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 109/201 (54%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H +++ N + +SL+ +YA+C + + R+F +P +SW ++I +
Sbjct: 137 GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 196
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E + R ++P + ++ ACA + L G+ + + G ++F+
Sbjct: 197 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 256
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++ +D+Y KCG + AR +FDKM D V+W A++ G A +G+ +A+ LF M+ +GV
Sbjct: 257 ATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 316
Query: 240 KPNSVAFVAVLTACSHAGLID 260
+P+ A L+AC+ G +D
Sbjct: 317 RPDCYAVAGALSACTRLGALD 337
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 140 PRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P H++F + + + L L G+QLH ++ N + +SLL +YA+CG + A+
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD+M VSWTA+I G+ +A+ + +G++P+S V VLTAC+
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + + ++ GIA S A DL + G++ +A E M
Sbjct: 235 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 280
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/512 (41%), Positives = 316/512 (61%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V +++WN +I G +NG ++E + + + M V D TL SV D G+
Sbjct: 234 VKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQW 293
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
I YA G+ + + ++L++MYAKC ++ + RLF + +D ++W+++I+G Q+
Sbjct: 294 IAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDR 353
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L F +M ++ P V+ S++ ACA L L GK +H I R + + ++
Sbjct: 354 CREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTA 413
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+D YAKCG I+ A F+ M + + +WTA+I G A +G + +A+ LF M + ++P
Sbjct: 414 LVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPT 473
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V F+ VL ACSH L+++ +F SMT+DYGI P EHY + DLLGRAG + EAY+FI
Sbjct: 474 DVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFI 533
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
NM P VW LLSAC VHKNVE+ + ++I +DP + G Y++LSNTYA+ +WK
Sbjct: 534 RNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWK 593
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+AA +R M+ KG++K P CS IE++ + F A D HP I E + E++E ++ G
Sbjct: 594 NAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVG 653
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
Y+P+T + DV+E +K+ + +HSE+LAI FG++ + G TIR+ KNLRVC DCH+A K
Sbjct: 654 YIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATK 713
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ REIIVRD +RFHHF+DG CSC DYW
Sbjct: 714 LISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 165/315 (52%), Gaps = 7/315 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P S+N +I R G E+AL++ V + + + PD T+++ + + D+ G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + YA + G + + +SLI+MYA C V +H LF + VK I+WN++IAG V+N
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + E ++ F+ ML + V+ S+ AC L +LG+ + G + +A
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +FD+M D+V+W+A+I G +A+++F +M+ V
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 241 PNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V V+VL+AC+ G ++ W + KD + A+ D + G +++A
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILG--TALVDFYAKCGCIKDAV 428
Query: 300 EFISNMHAGPTENVW 314
+ +M P N W
Sbjct: 429 KAFESM---PVRNTW 440
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 33/163 (20%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV + +W +I G+A NG EAL + M N++P T VL + V +G
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEG 493
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ RH +S+ Y C R+E + LL +
Sbjct: 494 R-------RH--------FTSMTQDYGICPRIEHYGCMVDLLG---------------RA 523
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ 163
GL DE +F R M I+P V + +++ AC + +G++
Sbjct: 524 GLIDEAYQFIRNM---PIEPNAVVWRALLSACTVHKNVEIGEE 563
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/514 (40%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+ S+N +I GL NG EAL ++ +M + + D+ T + + + D+ G
Sbjct: 190 VPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLG 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H R G + + + S++I+MY KC + ++ ++F L K+ +SW +I+A QN
Sbjct: 250 LQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQN 309
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L FF +M + + P +F+ ++ +CA ++ L GK LH I ++GF+D++ +
Sbjct: 310 GCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVG 369
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+K G+I A +F +M D ++W+A+I G + HG +A+ +F++M
Sbjct: 370 NALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKEC 429
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V FV VL+AC+H G + + + Y N + K GI P EHY + LL +AG+L EA
Sbjct: 430 PHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAEN 489
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ + W TLLSAC VH+N L KVAE + +DP ++G Y++LSN YA A+R
Sbjct: 490 FMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKR 549
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR + +KK P SWIE++N + FV+ K+HP ++I E ++ELL +
Sbjct: 550 WDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRP 609
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD V HDVE+EQK+ + YHSE+LAI +G++ TP G IR+IKNLR+C DCH+A
Sbjct: 610 MGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSA 669
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K ISK+ R IIVRD +RFH F DG CSC DYW
Sbjct: 670 VKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
M ++VSW ++ G NGL E L + + M +V+ ++P+ + ++++ +D V++
Sbjct: 88 MRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVE 147
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G + HGYA++ GL + + ++LI MY++ + V+ + ++ +P D S+N II G ++
Sbjct: 148 GWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLE 207
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L+ +M+ I +V++ + C+HL L LG Q+H + R G + + F+
Sbjct: 208 NGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFV 267
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S+++DMY KCGNI AR +F+++ ++VSWTA++ + +G +A++ F +ME DG+
Sbjct: 268 SSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGL 327
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN F +L +C+ + ++ K G A+ ++ ++G ++ A+
Sbjct: 328 LPNEYTFAVLLNSCAGISALGHG-KLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAH 386
Query: 300 EFISNM 305
+ M
Sbjct: 387 KVFLEM 392
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 144/280 (51%), Gaps = 9/280 (3%)
Query: 46 SVLPIFADYVDVIKGKEIHGYAI--RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
+L + AD ++ GK IH + I N+ +SLIN+YAKC ++ + LF +
Sbjct: 30 QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMR 89
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGK 162
++ +SW +++AG NGL E L+ F+ M+ + ++P F++I+ +C+ + G
Sbjct: 90 KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q HG +++G + ++ ++L+ MY++ +++ A ++ ++ D+ S+ +I G +G
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENG 209
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+A+ + ++M + + ++V +V CSH + M + SF
Sbjct: 210 YPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVS- 268
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
+A+ D+ G+ G + A + + + T+NV W +L+A
Sbjct: 269 SAIIDMYGKCGNILNARKVFNRLQ---TKNVVSWTAILAA 305
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 322/545 (59%), Gaps = 40/545 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SW +I G ARNG E+AL ++ + + P +L+S ++ + G
Sbjct: 378 MPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETG 437
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ G N + ++LI +Y K + ++F + VKD +S+NS ++ VQN
Sbjct: 438 KQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQN 497
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-------------------------L 155
LFDE F M P VS+++I+ ACA L
Sbjct: 498 NLFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPIL 553
Query: 156 TTL----------HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
T L LG+Q+H I+ G D + +A++L+ MY KC + + +FD M+
Sbjct: 554 TILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLK-VFDSMEE 612
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
DI +W +I G A HG +AI +++ M GV PN V FV +L ACSH+GL+D+ +
Sbjct: 613 RDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQF 672
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F SM+ DYG+ P EHYA + DLLGRAG +Q A FI +M P +W LL AC++HK
Sbjct: 673 FKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHK 732
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
NVE+ + AEK+F I+P+N G YV+LSN Y++ W + A +R M+ +G+ K P CSW+
Sbjct: 733 NVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWM 792
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
++KNK ++FV GD+ H I L EL ++ GYVPDT VLHD++EEQK++ L Y
Sbjct: 793 QIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLY 852
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LA+ +G++ TP G I+I+KNLR+CGDCHT IKF+S + +REI VRD +RFHHF +
Sbjct: 853 HSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRN 912
Query: 506 GKCSC 510
G CSC
Sbjct: 913 GSCSC 917
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV-IK 59
M + +W+T+I L++ G ++A V Q + P ++ + L + D I
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAF-AVYQRDPLKSVPSRTSMLTGLARYGRIDDAKIL 343
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+IH + NV +++I Y + V+++ LF +P ++ ISW +IAG +
Sbjct: 344 FDQIH--------EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG ++ L + + + P S +S AC+++ L GKQ+H ++ G N ++
Sbjct: 396 NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYV 455
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKDG 238
++L+ +Y K +I R IFD+M + D VS+ + M + N D A +F M
Sbjct: 456 CNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNS-FMSALVQNNLFDEARDVFNNMP--- 511
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
P+ V++ +++AC+ A ++A F SM
Sbjct: 512 -SPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 147/370 (39%), Gaps = 82/370 (22%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+++WN++I NG+ + ++ + NL+ + LS +A V
Sbjct: 59 MPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG----YARAGRVRDA 114
Query: 61 KEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + G +R N ++++ Y + + + +LF +P +D SWN+++ G
Sbjct: 115 RRVFDGMGVR-----NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCH 169
Query: 120 NGLFDEGLKF-------------------------------FRQMLIAKIKPRHVSFSSI 148
+ L +E FR ML + P + S+
Sbjct: 170 SQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSV 229
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------------------- 189
+ A HL + + +H + + GF+ ++ + +++L+ Y K
Sbjct: 230 LSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARN 289
Query: 190 -------------CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
G I A ++ + L + S T+++ G A +G DA LF+Q+
Sbjct: 290 EYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIH- 348
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+PN V++ A++T ++D+A FN M I+ +A + R G+ +
Sbjct: 349 ---EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTIS-----WAGMIAGYARNGRSE 400
Query: 297 EAYEFISNMH 306
+A + +H
Sbjct: 401 QALVSLQALH 410
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 155/385 (40%), Gaps = 75/385 (19%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN------------------------ 36
MP D+ SWNT++ G + L EEA N+ +M N
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211
Query: 37 -------LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC 89
+ P+ L SVL + IH + G + +V +G++++N Y K
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKD 271
Query: 90 ARVEDSH-RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+ DS + F + ++ +W++IIA Q G D+ +++ + + R +S+
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSR----TSM 327
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ A + K L I + N+ ++++ Y + + A +F++M +
Sbjct: 328 LTGLARYGRIDDAKILFDQI----HEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNT 383
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID-------- 260
+SW +I G A +G + A+ + + + G+ P+ + + ACS+ ++
Sbjct: 384 ISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSL 443
Query: 261 --KAWSYFNS-----MTKDYG-------IAPSFEH--------YAAVADLLGRAGKLQEA 298
KA FNS + YG + F+ Y + L + EA
Sbjct: 444 AVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEA 503
Query: 299 YEFISNMHAGPTENV--WLTLLSAC 321
+ +NM P+ +V W T++SAC
Sbjct: 504 RDVFNNM---PSPDVVSWTTIISAC 525
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 45/243 (18%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
S+ I + R+ ++ +F +P +D I+WNS+I NG+ D G
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRS----------- 85
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
L + G +R G + LL YA+ G +R AR +
Sbjct: 86 --------------------LADAISGGNLRTG--------TILLSGYARAGRVRDARRV 117
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
FD M + + V+W A++ +G+ A LF+ M V ++ +LT H+ L+
Sbjct: 118 FDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVS----SWNTMLTGYCHSQLM 173
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
++A + F M + G++ + V L+ + G+ + + + P + +++LS
Sbjct: 174 EEARNLFERMPERNGVSWTVMISGYV--LIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLS 231
Query: 320 ACR 322
A R
Sbjct: 232 AVR 234
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/512 (41%), Positives = 332/512 (64%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF----ADYVDVIKGKEIH 64
WN + L G E L++ R+M + + D FT + VL A ++ G+EIH
Sbjct: 147 WNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIH 206
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ +RHG + +V I ++L++MYA+ V ++ R+F +PVK+ +SW+++IA +NG
Sbjct: 207 GHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPL 266
Query: 125 EGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR+M++ + P V+ S++ ACA L L GK +HG I+R G D + + S+
Sbjct: 267 EALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSA 326
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +YA+CGN+ L +F++M+ D+VSW ++I +HG AI +F++M G+ P+
Sbjct: 327 LVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPS 386
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
++FV+VL ACSHAGL+++ F SM + + I PS EHYA + DLLGRA +L EA + I
Sbjct: 387 PISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKII 446
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
+M P VW +LL +CR+H NVELA + ++F ++P N G YV+L++ YA A+ W
Sbjct: 447 DDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWN 506
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+ +++ + +G++K P S IE++ K Y+F++ D+ +P +++ L +L M+++G
Sbjct: 507 EVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKG 566
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVPDTK VL+D++ E+K+ ++ HSE+LA+ FG+I + G TIRI KNLR+C DCH+ K
Sbjct: 567 YVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTK 626
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK REI+VRD +RFH F+DG CSCGDYW
Sbjct: 627 FISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 168/340 (49%), Gaps = 18/340 (5%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N +I L + G +AL ++ Q N P T ++ + +G ++H + I
Sbjct: 51 NPLIQSLCKQGNLNQALQVLSQEPN----PTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G D + + + LINMY++ ++++ ++F + WN++ G E L
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 130 FRQMLIAKIKPRHVSFSSIMPAC----AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+R+M + +++ ++ AC A ++ L G+++HG I+R+GF+ ++ I ++LLD
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNS 243
MYA+ G + A +FD+M + ++VSW+A+I + +G +A+ LF +M E + PNS
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V V+VL AC+ +++ + G+ +A+ + R G L+ +
Sbjct: 287 VTMVSVLQACAALAALEQG-KLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFE 345
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MID 341
M + W +L+S+ +H G+ A +IF MID
Sbjct: 346 RMEKRDVVS-WNSLISSYGIHG----FGRKAIQIFKEMID 380
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV ++VSW+ +I ++NG EAL + R+M N +L P+S T+ SVL A +
Sbjct: 244 MPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALE 303
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK +HGY +R GLD+ + + S+L+ +YA+C +E HR+F + +D +SWNS+I+
Sbjct: 304 QGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYG 363
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+G + ++ F++M+ + P +SF S++ AC+H + GK L ++R
Sbjct: 364 IHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVR 415
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
D+ + N +I + G ++ L Q+L + P ++ ++ +C +L G LH
Sbjct: 46 DSNNNNPLIQSLCKQGNLNQAL----QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLH 101
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
+I +G D + F+A+ L++MY++ +I AR +FDK I W A+ L G
Sbjct: 102 RHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGR 161
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+ + L+ +M + GV + + VL AC
Sbjct: 162 EVLDLYRRMNRIGVPSDRFTYTYVLKAC 189
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN++I +G +A+ I ++M + L P + SVL + V +G
Sbjct: 347 MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEG 406
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGC 117
K + +R H + +V + ++++ + R++++ ++ + ++ W S++ C
Sbjct: 407 KVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSC 465
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 320/513 (62%), Gaps = 8/513 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHGY 66
WN +I G A+ G+ EEAL + +M P T++SVLP A + GKE +HGY
Sbjct: 191 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS-EAFAGKEAVHGY 249
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G+ N + ++L++MYA+ + + + R+F ++ + D +SWN++I GCV G +
Sbjct: 250 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 309
Query: 127 LKFFRQMLI---AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ R+M + P ++ +++P CA L GK++HG +R+ D ++ + S+L
Sbjct: 310 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 369
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPN 242
+DMYAKCG + L+R +FD++ + ++W +IM +HG +A LF++M G +PN
Sbjct: 370 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 429
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V F+A L ACSH+G++D+ F++M +D+G+ P+ + A V D+LGRAG+L EAY +
Sbjct: 430 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 489
Query: 303 SNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
++M AG + + W T+L ACR+H+NV L E++ ++P YV+L N Y+AA +W
Sbjct: 490 TSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQW 549
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
AA +R MR +G+ K P CSWIEV + F+AG+ +HP ++ ++ L M
Sbjct: 550 TRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR 609
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VLHD+++ K +L HSE+LAI FG++ G TIR+ KNLRVC DCH A
Sbjct: 610 GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAA 669
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+V REI++RD RFHHF +G+CSCGDYW
Sbjct: 670 KFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 149/258 (57%), Gaps = 7/258 (2%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+V+WNT++ L ++G+++EA+ + M + ++PD T +S LP + + G+E+
Sbjct: 82 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 141
Query: 64 HGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQN 120
H Y I+ L AN + S+L++MYA +V + ++F ++P K WN++I G Q
Sbjct: 142 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 201
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G+ +E L+ F +M A P + +S++PACA + +HG +++ G N F+
Sbjct: 202 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 261
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL---FEQMEK 236
++L+DMYA+ G +AR IF +DL D+VSW +I G + G+ DA L +Q+E+
Sbjct: 262 QNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 321
Query: 237 DGVKPNSVAFVAVLTACS 254
GV PN++ + +L C+
Sbjct: 322 GGVVPNAITLMTLLPGCA 339
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 14/317 (4%)
Query: 41 SFTLSSVLP----IFADYVDVIKGKEIHGYAIRHGL--DANVCIGSSLINMYAKCARVED 94
SFTL SVL + A V G+E H +A+++GL ++L++MYA+ V D
Sbjct: 10 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 69
Query: 95 SHRLFC-LLPVK-DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ RLF P + D ++WN++++ VQ+G+FDE ++ M+ ++P V+F+S +PAC
Sbjct: 70 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 129
Query: 153 AHLTTLHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIV 209
+ L L +G+++H +I++ N F+AS+L+DMYA + AR +FD + +
Sbjct: 130 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 189
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
W A+I G A G +A+ LF +ME + G P +VL AC+ + +
Sbjct: 190 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGY 249
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
+ K G+A + A+ D+ R GK A + M P W TL++ C V +V
Sbjct: 250 VVK-RGMAGNRFVQNALMDMYARLGKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVA 307
Query: 329 LAGKVAEKIFMIDPNNM 345
A ++A ++ ++ +
Sbjct: 308 DAFQLAREMQQLEEGGV 324
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 322/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I ++ G EAL++ +M + KP+ FT ++VL + G
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALG 171
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG ++ D+++ +GSSL++MYAK ++E++ +F LP +D +S +IIAG Q
Sbjct: 172 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQL 231
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ F+++ ++P +V+++S++ A + L L GKQ H ++R +
Sbjct: 232 GLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 291
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ A+ +FD M +SW A+++G + HG + + LF M ++ V
Sbjct: 292 NSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 351
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP++V +AVL+ CSH + D S ++ M +YGI P EHY + D+LGRAG++ EA
Sbjct: 352 KPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEA 411
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+EFI M + PT V +LL ACRVH +V++ V ++ I+P N G YVILSN YA+A
Sbjct: 412 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASA 471
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D ++R M K + K P SWI+ + + F A D++HP + +KE+ +M
Sbjct: 472 GRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 531
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+Q GYVPD VL+DV+EEQK+ +L HSE+LA+ FG+I T +G IR+ KNLR+C DCH
Sbjct: 532 KQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCH 591
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K SK+ +RE+ +RD +RFH G CSCGDYW
Sbjct: 592 NFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 159/296 (53%), Gaps = 10/296 (3%)
Query: 13 IVGLARNGLYEEALNIVRQMGNVNLKPD--SFTLSSVLPIFADYVDVIKGKEIHGYAIRH 70
I L NG +EAL + V L P+ ++L D + +G+ +H + I+
Sbjct: 26 ISQLCSNGRLQEAL-----LEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKT 80
Query: 71 GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFF 130
+ + L+ Y KC +ED+ ++ +P K+ +SW ++I+ Q G E L F
Sbjct: 81 RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVF 140
Query: 131 RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
+M+ + KP +F++++ +C + L LGKQ+HG I++ +D ++F+ SSLLDMYAK
Sbjct: 141 AEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 200
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G I AR IF+ + D+VS TA+I G A G +A+ +F++++ +G++PN V + ++L
Sbjct: 201 GQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLL 260
Query: 251 TACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
TA S L+D ++ + + ++ ++ ++ D+ + G L A NM
Sbjct: 261 TALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAQRLFDNM 314
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/457 (44%), Positives = 301/457 (65%), Gaps = 1/457 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK++H +A++ G+ N+ + +LINMY C ++ S R+F + +++N+II
Sbjct: 130 EGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLA 189
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+N +E L FR++ +KP V+ ++ +CA L +L LG+ +H + + GFD +
Sbjct: 190 RNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVK 249
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+DMYAKCG++ A +F M D +W+A+I+ A HG+ AIS+ +M+K+
Sbjct: 250 VNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEK 309
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+P+ + F+ +L ACSH GL+++ + YF+ MT +YGI PS +HY + DLLGRAG+L EA
Sbjct: 310 VQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEA 369
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FI + PT +W TLLSAC H NVE+ +V E+IF +D ++ G YVI SN A
Sbjct: 370 YKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARY 429
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W D LR M +KG K P CS IEV N + F AG+ H ++ AL EL++ +
Sbjct: 430 GKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKEL 489
Query: 419 EQEGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ GYVPDT V + D+E+E+K+ +L YHSE+LAI FG++ TP GTTIR++KNLRVCGDC
Sbjct: 490 KSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDC 549
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A KFIS I R+II+RD RFHHF+DGKCSCGDYW
Sbjct: 550 HNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 117/231 (50%), Gaps = 2/231 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V++N +I+ LARN EAL + R++ + LKP T+ VL A + G+ +H
Sbjct: 178 VVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHE 237
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
Y ++G D V + ++LI+MYAKC ++D+ +F +P +D +W++II +G +
Sbjct: 238 YVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQ 297
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSLL 184
+ +M K++P ++F I+ AC+H + G + HG G ++ ++
Sbjct: 298 AISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMV 357
Query: 185 DMYAKCGNIRLARCIFDKMDLHDI-VSWTAVIMGNALHGNAHDAISLFEQM 234
D+ + G + A D++ + + W ++ + HGN + E++
Sbjct: 358 DLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERI 408
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +W+ +IV A +G +A++++ +M ++PD T +L + V +G
Sbjct: 274 MPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG 333
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSIIAGCV 118
E HG +G+ ++ ++++ + R++++++ LP+K I W ++++ C
Sbjct: 334 FEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACS 393
Query: 119 QNGLFDEGLKFFRQML 134
+G + G + ++
Sbjct: 394 THGNVEMGKRVIERIF 409
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/512 (40%), Positives = 320/512 (62%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI----KGKEIH 64
WN + LA G + L + +M + + D FT + +L ++ KGKEIH
Sbjct: 138 WNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIH 197
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +RHG A+V + ++L++MYA+ V + +F +PVK+ +SW+++IA +NG
Sbjct: 198 AHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPY 257
Query: 125 EGLKFFRQMLIAKIK--PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR+M++ P V+ S++ ACA L GK +H I+R G D + + S+
Sbjct: 258 EALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISA 317
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MYA+CG + + IFD+M D+V W ++I LHG AI +FE+M G P+
Sbjct: 318 LITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPS 377
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
++F++VL ACSH GL+++ F SM K++GI PS EHYA + DLLGRA +L EA + I
Sbjct: 378 HISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKII 437
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
++ P VW +LL ACR+H +VELA + ++++F ++P N G YV+L++ YA A W
Sbjct: 438 EDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWD 497
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+ ++ + ++ ++K P SWIEV+ K Y+F + D+ +P +++ L L M+Q G
Sbjct: 498 EVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRG 557
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
Y P TK VL+D+++E+K+ ++ HSE+LA+ FG+I T G TIRI KNLR+C DCH+ K
Sbjct: 558 YTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTK 617
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 618 FISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 168/341 (49%), Gaps = 20/341 (5%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N +I L + G ++AL ++ N P T ++ A + ++H +
Sbjct: 42 NHLIQSLCKQGNLKQALYLLSHESN----PTQQTCELLILSAARRNSLSDALDVHQLLVD 97
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G D + + + LINM+++ V+++ ++F + WN++ G ++ L+
Sbjct: 98 GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 157
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAH----LTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ +M + + +++ ++ AC ++ L GK++H I+R+G+ ++ + ++L+D
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 217
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM---EKDGVKPN 242
MYA+ G + A +FD+M + ++VSW+A+I A +G ++A+ LF +M D V PN
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSV-PN 276
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
SV V+VL AC+ +++ ++ G+ +A+ + R GKL+
Sbjct: 277 SVTMVSVLQACAAFAALEQG-KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIF 335
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MID 341
MH +W +L+S+ +H G+ A KIF MID
Sbjct: 336 DRMHKKDVV-LWNSLISSYGLHG----YGRKAIKIFEEMID 371
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 116/206 (56%), Gaps = 3/206 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV ++VSW+ +I A+NG EAL + R+M + P+S T+ SVL A + +
Sbjct: 235 MPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALE 294
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IH Y +R GLD+ + + S+LI MYA+C ++E +F + KD + WNS+I+
Sbjct: 295 QGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYG 354
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNM 177
+G + +K F +M+ P H+SF S++ AC+H + GK+L +++ +G ++
Sbjct: 355 LHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSV 414
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKM 203
+ ++D+ + + A I + +
Sbjct: 415 EHYACMVDLLGRANRLDEAAKIIEDL 440
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/514 (40%), Positives = 324/514 (63%), Gaps = 4/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W+T++ G G EAL + +M + D + V+ + G
Sbjct: 168 MPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIG 227
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HG +RH + +V +SL++MYAK ++ + ++F ++P ++ ++W+++I+G QN
Sbjct: 228 ASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQN 287
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L FR++ ++P + S + ACA + L LGK +HG I+R + +
Sbjct: 288 GRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILG 346
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+++LDMY+KCG++ AR +F+K+ D+V W A+I HG HDA++LF+++ + G+K
Sbjct: 347 TAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIK 406
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL+++ +F+ M K++GI P+ +HY + DLL R+G ++EA +
Sbjct: 407 PDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEAND 466
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M PT +W+ LLS C +K +EL +A+KI + P ++G ++SN YAAA++
Sbjct: 467 MLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKK 526
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ G KK P S IEVK +AFV D+SHP + I + + +L M +
Sbjct: 527 WDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRK 586
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T+ V HD++E+Q LL YHSERLAI FG++ T GT + IIKNLRVCGDCH A
Sbjct: 587 LGYVPRTEFVYHDLDEDQ---LLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDA 643
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+ISKIV REI+VRD RFHHF+DG CSCGDYW
Sbjct: 644 IKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 162/318 (50%), Gaps = 8/318 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVIKGKEIHGY 66
WN ++ +R G AL + R + + + +P+S T + L A +D + + +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPS-SARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
A +G D VC S+L+++Y++C +E++ R+F +P KD ++W++++AG V G E
Sbjct: 135 AAGYGHDVFVC--SALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEA 192
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L + +M + V ++ AC +G +HG ++R+ ++ +SL+ M
Sbjct: 193 LAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSM 252
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAK G++ +A +F M + V+W+A+I G A +G A +A+ LF +++ DG++P S A
Sbjct: 253 YAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWAL 312
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V+ L AC+ G + S + + AV D+ + G L+ A + + +
Sbjct: 313 VSALLACASVGFLKLGKSIHGFILRRLEWQCILG--TAVLDMYSKCGSLESARKLFNKLS 370
Query: 307 AGPTENVWLTLLSACRVH 324
+ +W +++ C H
Sbjct: 371 SRDLV-LWNAIIACCGTH 387
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 310/510 (60%), Gaps = 2/510 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK-GKEIH 64
+VSW +I G R EE + +M N+ P+ T+ S++ I +V ++ GK +H
Sbjct: 197 IVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLI-ISCGFVGAVQLGKRLH 255
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y +R+G ++ + ++L++MY KC + + +F + KD ++W ++I+ Q D
Sbjct: 256 AYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCID 315
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F QM ++P ++ S++ CA L +GK H I + G + ++ + ++L+
Sbjct: 316 YAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALI 375
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I A+ +F + DI +W ++ G +HG A+ LF +ME GVKPN +
Sbjct: 376 DMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDI 435
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ L ACSHAGL+ + F M D+G+ P EHY + DLLGRAG L EAY+ I +
Sbjct: 436 TFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIES 495
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W +L+AC++HKN + A ++ ++P N G V++SN YAAA RW D
Sbjct: 496 MPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDV 555
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R +++ G+KK P S IEV + F GD +HP +I+E L E+ +++++ GY+
Sbjct: 556 AGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYL 615
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT VLH+++EE+K+ L YHSE+LA+ FG+I T GT IR++KNLR+C DCHT K +
Sbjct: 616 PDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLL 675
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R IIVRD +RFHHF +G CSCG YW
Sbjct: 676 SKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 160/301 (53%), Gaps = 23/301 (7%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
ALN M ++++ DSF + SVL + GKEIHG+++++GL ++V + ++L+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSII----------------------AGCVQNGL 122
MY++C + + LF + +D +SW+++I AG ++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+EG + F +M+ + P ++ S++ +C + + LGK+LH I+RNGF ++ +A++
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMY KCG IR AR IFD M D+++WTA+I A A LF QM +GV+PN
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
+ V++L+ C+ G +D +F++ G+ A+ D+ + G + A
Sbjct: 333 ELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391
Query: 303 S 303
S
Sbjct: 392 S 392
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+++W +I A+ + A + QM + ++P+ T+ S+L + A + G
Sbjct: 293 MKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG 352
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K H Y + G++ +V + ++LI+MYAKC + + RLF +D +WN ++AG +
Sbjct: 353 KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMH 412
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ LK F +M +KP ++F + AC+H + GK L +I + G +
Sbjct: 413 GYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH 472
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
++D+ + G + A + + M + +I W A++ +H N++
Sbjct: 473 YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSN 519
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/519 (42%), Positives = 313/519 (60%), Gaps = 38/519 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN+++VG A+N +++AL + R+M +V + D+ T++S+LP
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP----------- 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
A+ + NV MY K +F + K +SWN +I ++N
Sbjct: 250 ------AVSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E ++ + +M +P VS +S++PAC + L LGK++HG I R N+ +
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +F+ M D+VSWTA+I G DA++LF +++ G+
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV L ACSHAGL+++ S F MT Y I P EH A + DLLGRAGK++EAY
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P E VW LL ACRVH + ++ A+K+F + P G YV+LSN YA A R
Sbjct: 468 FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 527
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ ++R M++KG+KK P S +EV + F+ GD+SHP I L L+++M++
Sbjct: 528 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD-----GTTIRIIKNLRVCG 475
GYVPD++ LHDVEEE K+ L HSE+LAIVF ++ T + TIRI KNLR+CG
Sbjct: 588 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICG 647
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A K IS+I REII+RD +RFH F G CSCGDYW
Sbjct: 648 DCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 42 FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
F L VL Y D+ + +H I L N +G L+ YA V + ++F
Sbjct: 43 FLLGQVLDT---YPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P ++ I N +I V NG + EG+K F M ++P H +F ++ AC+ T+ +G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+++HG + G +F+ + L+ MY KCG + AR + D+M D+VSW ++++G A +
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
DA+ + +ME + ++ ++L A S+
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+ +H II N + L+ YA ++ AR +FD++ +++ +I +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + + +F M V+P+ F VL ACS +G I S TK G++ +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFV 177
Query: 282 YAAVADLLGRAGKLQEAYEFISNM 305
+ + G+ G L EA + M
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM 201
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 324/514 (63%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G +++G + EAL + +M K + FTL++VL + + +
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H ++ ++++ +GSSL++MY K ++++ ++F +LP +D +S +II+G Q
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL DE L FRQ+ + ++ +V+F++++ + + L +L+ GKQ+HG I+R + +
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMY+KCG + +R +FD M +SW A++MG HG + + LF M ++ VK
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VK 340
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV +AVL+ CSH GL+D+ F+ + K+ HY V DLLGR+G+LQ+A +
Sbjct: 341 PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALD 400
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M PT +W +LL ACRVH NV + VA+K+ ++P N G YVILSN YAAA
Sbjct: 401 LIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGM 460
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R M + K PA SWI + + F + ++ HP IN +KE+ ++
Sbjct: 461 WKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKA 520
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VPD VLHDV++EQK+ +L HSE+LAI FG++ TP G TI+++KNLR+C DCH
Sbjct: 521 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNF 580
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ REI +RD +RFH +DG C+CGDYW
Sbjct: 581 AKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 32/295 (10%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H + ++ V + + LI +Y +C ++D+ + +P ++ +SW ++I+G
Sbjct: 59 EGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYS 118
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q+G E L+ F +ML A K + ++++ +C ++ +Q+H +++ F+ +MF
Sbjct: 119 QSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMF 178
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSLLDMY K GNI+ AR +FD + D VS TA+I G A G +A+ LF Q+ G
Sbjct: 179 VGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSG 238
Query: 239 VKPNSVAFVAVLTACS-----------HAGLIDKAWSYF----NSMTKDYGIAPSFEHYA 283
++ N V F +LT+ S H ++ K +F NS+ Y +
Sbjct: 239 MQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSR 298
Query: 284 AVADLL---------------GRAGKLQEAYEFISNM--HAGPTENVWLTLLSAC 321
V D + GR G QE + M P L +LS C
Sbjct: 299 RVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGC 353
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R + + + AC L G+Q+H +++ + +++A+ L+ +Y +CG + AR +
Sbjct: 40 RFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVL 99
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D M ++VSWTA+I G + G +A+ LF +M + G K N VLT+C I
Sbjct: 100 DGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQ 159
Query: 261 KAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQEA 298
+ + + K +FE + +++ D+ G++G +QEA
Sbjct: 160 QVEQVHSLVVK-----TNFESHMFVGSSLLDMYGKSGNIQEA 196
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 299/514 (58%), Gaps = 40/514 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+WN +I GL+++ D + V D DV G
Sbjct: 176 MPKRDVVAWNAMIAGLSQS-------------------EDPYVARRVFDQMVDQDDVSWG 216
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ GYA N C + + + D +L ++WN IIA +QN
Sbjct: 217 TMMAGYA------HNGC--------FVEVLELFDKMKL-------GNVTWNVIIAAYMQN 255
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F QM + P V+F S++PA A+L G H CII+ GF N +
Sbjct: 256 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 315
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG + + +F++MD D VSW A++ G A+HG+ AI+LF M++ V+
Sbjct: 316 NSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 375
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+SV+FV+VL+AC HAGL+++ F+SM+ Y I P EHYA + DLLGRAG E
Sbjct: 376 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 435
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P VW LL +CR+H NV+L + + ++P N +V+LS+ YA + R
Sbjct: 436 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGR 495
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DA R M + G+KKTP CSW+E+KNK +AF GDKSHP ++ LLE+ME+
Sbjct: 496 WADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEK 555
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD VL +VEEE K+ LY HSERLAI F ++ TP G+TI+I+KNLRVC DCHT
Sbjct: 556 IGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTT 615
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI R IIVRD +RFHHFEDG CSC DYW
Sbjct: 616 TKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 39/208 (18%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH I G + I + LIN+Y+ + + + +F P I WNS+I ++
Sbjct: 70 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 128
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + M + + G + ++FI +
Sbjct: 129 QYNEALEMYYCM----------------------------------VEKGGLERDVFIGA 154
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+DMY+K G+++ AR +FDKM D+V+W A+I G + + + A +F+QM V
Sbjct: 155 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQM----VDQ 210
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+ V++ ++ +H G + F+ M
Sbjct: 211 DDVSWGTMMAGYAHNGCFVEVLELFDKM 238
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++ + ++ +C HL L Q+H II +GF + I + L+++Y+ LAR +FD
Sbjct: 52 YLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFD 107
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLID 260
+ W ++I ++A+ ++ M EK G++ + ++ S G +
Sbjct: 108 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLK 167
Query: 261 KAWSYFNSMTK 271
+A F+ M K
Sbjct: 168 RAREVFDKMPK 178
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G ++ G +EEAL ++M + + D L S L G
Sbjct: 167 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL-LPVKDAISWNSIIAGCVQ 119
+ +H ++ G ++++ +G++L +MY+K +E + +F + ++ +S+ +I G V+
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 286
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
++GL F ++ I+P +FSS++ ACA+ L G QLH +++ FD++ F+
Sbjct: 287 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 346
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S L+DMY KCG + A FD++ ++W +++ HG DAI FE+M GV
Sbjct: 347 SSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGV 406
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN++ F+++LT CSHAGL+++ YF SM K YG+ P EHY+ V DLLGRAG+L+EA
Sbjct: 407 KPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAK 466
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI+ M P W + L ACR+H + E+ AEK+ ++P N GA V+LSN YA R
Sbjct: 467 EFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANER 526
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D S+R+ MR+ +KK P SW++V K + F A D SH I E L LL++++
Sbjct: 527 QWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIK 586
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T V D+++ K+ LL+ HSER+A+ F +I P G I + KNLRVC DCH+
Sbjct: 587 AAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHS 646
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFISK+ R+IIVRDNSRFHHF DG CSCGDYW
Sbjct: 647 AIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 179/345 (51%), Gaps = 11/345 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSW +I GL++N + EA+ M P F SS + A + G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ G+ + + +GS+L +MY+KC + D+ ++F +P KD +SW ++I G +
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L F++M+ ++ S + AC L G+ +H +++ GF+ ++F+
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L DMY+K G++ A +F + ++VS+T +I G +S+F ++ + G+
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
+PN F +++ AC++ +++ + K ++ P + + D+ G+ G L+ A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHA 363
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MID 341
+ + PTE W +L+S H GK A K F M+D
Sbjct: 364 IQAFDEI-GDPTEIAWNSLVSVFGQHG----LGKDAIKFFERMVD 403
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 1/259 (0%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D+ L+ V+ +A + +GK++H I G + + L+NMY+KC ++ + +LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+P ++ +SW ++I+G QN F E ++ F M I P +FSS + ACA L ++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
+GKQ+H ++ G +F+ S+L DMY+KCG + A +F++M D VSWTA+I G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
G +A+ F++M + V + + L AC S +S+ K G
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK-LGFESDI 242
Query: 280 EHYAAVADLLGRAGKLQEA 298
A+ D+ +AG ++ A
Sbjct: 243 FVGNALTDMYSKAGDMESA 261
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/513 (39%), Positives = 319/513 (62%), Gaps = 8/513 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHGY 66
WN +I G A+ G+ EEAL + +M P T++SVLP A + GKE +HGY
Sbjct: 345 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS-EAFAGKEAVHGY 403
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G+ N + ++L++MYA+ + + + R+F ++ + D +SWN++I GCV G +
Sbjct: 404 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 463
Query: 127 LKFFRQMLI---AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ R+M + P ++ +++P CA L GK++HG +R+ D ++ + S+L
Sbjct: 464 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 523
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPN 242
+DMYAKCG + L+R +FD++ + ++W +IM +HG +A LF++M G +PN
Sbjct: 524 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 583
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V F+A L ACSH+G++D+ F++M +D+G+ P+ + A V D+LGRAG+L EAY +
Sbjct: 584 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 643
Query: 303 SNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
++M G + + W T+L ACR+H+NV L E++ ++P YV+L N Y+AA +W
Sbjct: 644 TSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQW 703
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
AA +R MR +G+ K P CSWIEV + F+AG+ +HP ++ ++ L M
Sbjct: 704 TRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR 763
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VLHD+++ K +L HSE+LAI FG++ G TIR+ KNLRVC DCH A
Sbjct: 764 GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAA 823
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+V REI++RD RFHHF +G+CSCGDYW
Sbjct: 824 KFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 181/353 (51%), Gaps = 14/353 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP----IFADYVDVIKG 60
D VS+N++I L ++ AL +R M SFTL SVL + A V G
Sbjct: 128 DAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLG 187
Query: 61 KEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHRLFC-LLPVK-DAISWNSIIAG 116
+E H +A+++GL ++L++MYA+ V D+ RLF P + D ++WN++++
Sbjct: 188 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 247
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDD 175
VQ+G+FDE ++ M+ ++P V+F+S +PAC+ L L +G+++H +I++
Sbjct: 248 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 307
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
N F+AS+L+DMYA + AR +FD + + W A+I G A G +A+ LF +
Sbjct: 308 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 367
Query: 234 MEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
ME + G P +VL AC+ + + + K G+A + A+ D+ R
Sbjct: 368 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK-RGMAGNRFVQNALMDMYARL 426
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM 345
GK A + M P W TL++ C V +V A ++A ++ ++ +
Sbjct: 427 GKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 478
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 17/298 (5%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL--DANVCIGSSLINMYAKC 89
M + + D L + A D + IH A+R GL + + ++L+ YA+C
Sbjct: 50 MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 109
Query: 90 ARVEDSHRLFCLL--PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
R+ + +F + DA+S+NS+I+ +D L R ML + S
Sbjct: 110 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 169
Query: 148 IMPACAHL----TTLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFD 201
++ A +HL + LG++ H ++NG F ++LL MYA+ G + A+ +F
Sbjct: 170 VLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFA 229
Query: 202 KMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
D+V+W ++ G +A+ M GV+P+ V F + L ACS L+
Sbjct: 230 GATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELL 289
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMHAGPTENVW 314
D + KD +A + +A+ D+ + GK ++ ++ + + +G +W
Sbjct: 290 DVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD--SGKQLGMW 345
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/513 (39%), Positives = 319/513 (62%), Gaps = 8/513 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKE-IHGY 66
WN +I G A+ G+ EEAL + +M P T++SVLP A + GKE +HGY
Sbjct: 343 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARS-EAFAGKEAVHGY 401
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G+ N + ++L++MYA+ + + + R+F ++ + D +SWN++I GCV G +
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461
Query: 127 LKFFRQMLI---AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ R+M + P ++ +++P CA L GK++HG +R+ D ++ + S+L
Sbjct: 462 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 521
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPN 242
+DMYAKCG + L+R +FD++ + ++W +IM +HG +A LF++M G +PN
Sbjct: 522 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 581
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V F+A L ACSH+G++D+ F++M +D+G+ P+ + A V D+LGRAG+L EAY +
Sbjct: 582 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 641
Query: 303 SNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
++M G + + W T+L ACR+H+NV L E++ ++P YV+L N Y+AA +W
Sbjct: 642 TSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQW 701
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
AA +R MR +G+ K P CSWIEV + F+AG+ +HP ++ ++ L M
Sbjct: 702 TRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVAR 761
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VLHD+++ K +L HSE+LAI FG++ G TIR+ KNLRVC DCH A
Sbjct: 762 GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAA 821
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+V REI++RD RFHHF +G+CSCGDYW
Sbjct: 822 KFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 181/353 (51%), Gaps = 14/353 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP----IFADYVDVIKG 60
D VS+N++I L ++ AL +R M SFTL SVL + A V G
Sbjct: 126 DAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLG 185
Query: 61 KEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHRLFC-LLPVK-DAISWNSIIAG 116
+E H +A+++GL ++L++MYA+ V D+ RLF P + D ++WN++++
Sbjct: 186 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 245
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDD 175
VQ+G+FDE ++ M+ ++P V+F+S +PAC+ L L +G+++H +I++
Sbjct: 246 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 305
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
N F+AS+L+DMYA + AR +FD + + W A+I G A G +A+ LF +
Sbjct: 306 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 365
Query: 234 MEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
ME + G P +VL AC+ + + + K G+A + A+ D+ R
Sbjct: 366 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK-RGMAGNRFVQNALMDMYARL 424
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM 345
GK A + M P W TL++ C V +V A ++A ++ ++ +
Sbjct: 425 GKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 476
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 17/298 (5%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL--DANVCIGSSLINMYAKC 89
M + + D L + A D + IH A+R GL + + ++L+ YA+C
Sbjct: 48 MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107
Query: 90 ARVEDSHRLFCLL--PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
R+ + +F + DA+S+NS+I+ +D L R ML + S
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 167
Query: 148 IMPACAHL----TTLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFD 201
++ A +HL + LG++ H ++NG F ++LL MYA+ G + A+ +F
Sbjct: 168 VLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFA 227
Query: 202 KMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
D+V+W ++ G +A+ M GV+P+ V F + L ACS L+
Sbjct: 228 GATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELL 287
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMHAGPTENVW 314
D + KD +A + +A+ D+ + GK ++ ++ + + +G +W
Sbjct: 288 DVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD--SGKQLGMW 343
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +V+WN+++ G +NGL++E + + R++ + ++ D T+ SVL ++ G
Sbjct: 182 MPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y + GL N + +SLI+MYAKC +V+ + +LF + +D ++W+++I+G Q
Sbjct: 242 ELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQA 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L F +M + P V+ S++ +CA L GK +H I + + +
Sbjct: 302 DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG 361
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D YAKCG I + +F +M ++ +WTA+I G A +G A+ F M ++ VK
Sbjct: 362 TQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVK 421
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ VL+ACSHA L+D+ FNSM +D+ I P EHY + D+LGRAG L+EAY+
Sbjct: 422 PNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQ 481
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI NM P VW TLL++CR HKN+E+A K E I ++P + G Y++LSNTYA R
Sbjct: 482 FIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGR 541
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
+DA +R ++ K +KK P CS IE+ + F + D H I++AL ++++++++
Sbjct: 542 VEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKR 601
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T + + EEE K+ + +HSE+LAI +G+I T TTIRI KNLR+C DCH A
Sbjct: 602 LGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNA 661
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFIS++ +R IIVRD +RFHHF+DG CSC DYW
Sbjct: 662 TKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 167/299 (55%), Gaps = 3/299 (1%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
++N +I GLA + AL + ++M +++ D FT SSVL + + +G+++H
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI 147
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ G +N + ++LI MYA C ++ + +F +P + ++WNS+++G +NGL+DE +
Sbjct: 148 LKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVV 207
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
K FR++L +I+ V+ S++ AC L L +G+ + I+ G N + +SL+DMY
Sbjct: 208 KLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMY 267
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG + AR +FD+MD D+V+W+A+I G A +A++LF +M+K V PN V V
Sbjct: 268 AKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMV 327
Query: 248 AVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+VL +C+ G + W +F K + + + D + G + + E M
Sbjct: 328 SVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG--TQLIDFYAKCGYIDRSVEVFKEM 384
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 43/254 (16%)
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
++ ++N +I G D L F++M ++ +FSS++ AC+ + L G+Q+H
Sbjct: 85 ESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVH 144
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
I+++GF N F+ ++L+ MYA CG I +AR +FD M IV+W +++ G +G
Sbjct: 145 ALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWD 204
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTAC-------------------------------- 253
+ + LF ++ + ++ + V ++VL AC
Sbjct: 205 EVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLI 264
Query: 254 ---SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG-- 308
+ G +D A F+ M K +A ++A+ +A + +EA M G
Sbjct: 265 DMYAKCGQVDTARKLFDEMDKRDVVA-----WSAMISGYAQADRCKEALNLFHEMQKGNV 319
Query: 309 -PTENVWLTLLSAC 321
P E +++L +C
Sbjct: 320 YPNEVTMVSVLYSC 333
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/435 (45%), Positives = 284/435 (65%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++I YAK ++++ LF L +DAI WN +I G Q+GL +EGL FRQML AK++
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P V+ +++ AC L G+ +H I NG N+ + +SL+DMY+KCG++ AR +
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F+++ D+V+W ++++G A+HG + DA+ LF++M G +P + F+ VL ACSHAGL+
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
+ W +F SM +YGI P EHY + +LLGRAG L+EAYE + NM +W TLL
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249
Query: 320 ACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKT 379
ACR+H N+ L ++AE + + N G YV+LSN YAAA W+ A +R M+ G +K
Sbjct: 250 ACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKE 309
Query: 380 PACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQK 439
P CS IEV NK + F+AGD HP I E L+E+ ++ GY P T VLHD+E+ QK
Sbjct: 310 PGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQK 369
Query: 440 KNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSR 499
+ L HSE+LA+ FG+I T GTTI+I+KNLRVC DCH K ISKI R++++RD +R
Sbjct: 370 ERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNR 429
Query: 500 FHHFEDGKCSCGDYW 514
FHHF +G CSCGDYW
Sbjct: 430 FHHFVNGLCSCGDYW 444
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 126/240 (52%), Gaps = 6/240 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D + WN +I G A++GL E L + RQM N ++P+ T+ +VL + G+ +H
Sbjct: 36 DAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVH 95
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y +G+ NV +G+SLI+MY+KC +ED+ +F + KD ++WNS++ G +G
Sbjct: 96 SYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQ 155
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSL 183
+ L+ F++M + +P ++F ++ AC+H + G K + G + + +
Sbjct: 156 DALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCM 215
Query: 184 LDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+++ + G + A + M++ D V W ++ LHGN I+L EQ+ + V N
Sbjct: 216 VNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGN----IALGEQIAEYLVSQN 271
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 319/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFT-LSSVLPIFADYVDVIK 59
MPV + V+W+ +I G EA N+ + M L S T ++S L + A D+
Sbjct: 266 MPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHM 325
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++H + G+ A++ +SL++MYAK + ++ F + VKD IS+ ++++GCVQ
Sbjct: 326 GTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ 385
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +E F++M ++P + S++PAC+HL L GK HG +I G I
Sbjct: 386 NGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCG I L+R +FDKM D+VSW +I G +HG +A +LF M+ G
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGF 505
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V F+ ++ ACSH+GL+ + +F++MT YGI P EHY + DLL R G L EAY
Sbjct: 506 APDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAY 565
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI +M VW LL ACR+HKN++L +V+ I + P G +V+LSN ++AA
Sbjct: 566 QFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAG 625
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+ +AA +R+ + KG KK+P SWIE+ +AFV GD+SHP I L ++ ++
Sbjct: 626 RFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIK 685
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY DT VL D+EEE+K+ L YHSE+LAI FG++ + TI + KNLRVCGDCHT
Sbjct: 686 KLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHT 745
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+++ + R IIVRD +RFHHF++G+CSCG++W
Sbjct: 746 AIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D ++N +I + G + A+++ R M + P+ +T VL + VD+ G
Sbjct: 60 IPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAG 119
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH +A GL ++ + ++LI++Y +CAR + +F +P++D ++WN+++AG +
Sbjct: 120 RTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANH 179
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN--- 176
G++ + M ++P + S++P A L G +H +R + N
Sbjct: 180 GMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQ 239
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ I ++LLDMYAKC + A +F M + + V+W+A+I G L +A +LF+ M
Sbjct: 240 VLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLV 299
Query: 237 DGVKPNSVAFVA-VLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+G+ S VA L C A L D + +++ GI ++ + +AG
Sbjct: 300 EGLCFLSATSVASALRVC--ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL 357
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ EA F + T + + LLS C + E A V +K+
Sbjct: 358 INEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKKM 399
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ ++F +P DA ++N++I G F + +R ML ++ P +F ++ AC+
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L L G+ +H G ++F++++L+D+Y +C AR +F KM + D+V+W A+
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 215 IMGNALHGNAHDAIS-LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ G A HG H AI+ L + + G++PN+ V++L + G + + S
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L+ + G + LAR +FD++ D ++ A+I + G H AI L+ M + V PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 244 VAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
F VL ACS L+D +A ++ G+ A+ DL R +
Sbjct: 101 YTFPFVLKACS--ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF------- 151
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAG 331
GP NV+ + V N LAG
Sbjct: 152 -----GPARNVFAKMPMRDVVAWNAMLAG 175
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/506 (43%), Positives = 322/506 (63%), Gaps = 9/506 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP D +W+ ++ G AR+G E AL + R+M GN + + FT SS L A
Sbjct: 121 MPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGN-DGADNEFTASSALAAAAAARC 179
Query: 57 VIKGKEIHGYAIRHGLDA---NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
G+E+H + +R G+DA + + S+L +MYAKC RV+D+ R+F +PV+DA+SW ++
Sbjct: 180 GRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAM 239
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
+ G EG + F ML + ++P +++ ++ ACA G+Q+HG + ++G
Sbjct: 240 VERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSG 299
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
D+ F S+LL MY+KCG++ A +F+ M D+VSWTAVI G A +G +A+ F+
Sbjct: 300 TGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFD 359
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+ G+KP+ V FV VL+AC+HAGL+DK F+S+ + Y I + +HYA V DLL R+
Sbjct: 360 MFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRS 419
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G+ + A + I NM P + +W +LL CR+HKNV LA + AE +F I+P N YV L+
Sbjct: 420 GQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLA 479
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA+ + + +R M +KG+ K PA SWIEV + + F+ GDKSHP I LK
Sbjct: 480 NIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLK 539
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+L +M +EGYV D + VLHDVE+EQK+ + YHSERLA+ FGII +P+G+ I++ KNLR
Sbjct: 540 KLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLR 599
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNS 498
+CGDCH AIK IS+IVQR+IIVRD++
Sbjct: 600 ICGDCHAAIKLISQIVQRDIIVRDSN 625
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 148/533 (27%), Positives = 239/533 (44%), Gaps = 76/533 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
MPV D VSW ++ G E + M ++P+ FT + VL A++
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESF 287
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++HG + G + S+L+ MY+KC + + R+F + D +SW ++I+G Q
Sbjct: 288 GRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQ 347
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +E L++F L + IKP HV+F ++ ACAH + G ++ I +
Sbjct: 348 NGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSI------KEQYC 401
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
D YA C+ D + ++GN V
Sbjct: 402 IEHTADHYA---------CVIDLLSRSGQFERAEKMIGNM------------------AV 434
Query: 240 KPNSVAFVAVLTAC---SHAGLIDKAWSYFNSMTKDYGIAP-SFEHYAAVADLLGRAGKL 295
KPN + ++L C + GL +A + I P + Y +A++ G
Sbjct: 435 KPNKFLWASLLGGCRIHKNVGLARRAAEAL------FEIEPENPATYVTLANIYASVGLF 488
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID----PNNMGAYVIL 351
E + M E+ +T + A +E+ +V +F++ P Y +L
Sbjct: 489 DEVEDVRRIM-----ESKGITKMPAS---SWIEVGRRV--HVFLVGDKSHPKADEIYALL 538
Query: 352 SNTYAAARRWKDAASLRVFMRN--KGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN- 408
Y A + + + K+ E A+ +A + P N
Sbjct: 539 KKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNL 598
Query: 409 -------EALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD 461
A+K + + ++++ V D+ + K+ + YHSERLA+ FGII +P+
Sbjct: 599 RICGDCHAAIKLISQIVQRDIIVRDSNSL--------KEQDIGYHSERLAVAFGIIASPE 650
Query: 462 GTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
G+ I++ KNLR+CGDCHTAIK IS+IVQR+IIVRD++RFHHF+DG CSC DYW
Sbjct: 651 GSPIKVFKNLRICGDCHTAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 703
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 75 NVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
++C ++LI+ ++ R + + LF +P +D +W+++++G ++G + L +R+M
Sbjct: 93 DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRM 152
Query: 134 LIAKIKP------RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD---DNMFIASSLL 184
+ +P + SS + A A G++LH ++R G D + + S+L
Sbjct: 153 ---QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALA 209
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNS 243
DMYAKCG + AR +FD+M + D VSWTA++ G + LF M + GV+PN
Sbjct: 210 DMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNE 269
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ VL AC+ + M K G S +A+ + + G + A
Sbjct: 270 FTYAGVLRACAEFAVESFGRQVHGRMAKS-GTGDSCFAESALLRMYSKCGDMGSAVRVFE 328
Query: 304 NMHAGPTENVWLTLLSA 320
M A P W ++S
Sbjct: 329 AM-AKPDLVSWTAVISG 344
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 326/514 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++SWNT+I G N EAL + +M + FTLSS L A +I+
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H AI+ LD++ +G++ +++YAKC ++D+ +F +P K +++W+S+ AG VQN
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L F+ ++ + SSI+ CA L + G Q+H I+++GF N+F+A
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVA 296
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D+YAKCG I + +F M+ ++V W A+I + H ++ +A+ LFE+M++ G+
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIF 356
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V ++++L+ACSH GL+++ YFN + D P+ HY+ + D+LGR+GK EA++
Sbjct: 357 PNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWK 416
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M PT ++W +LL + R+HKN+ LA AE++F ++P N G +V+LSN YAA+
Sbjct: 417 LLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGN 476
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ R ++R+ G KK SWIE K K + FVAG++ HP + L+E+ M +
Sbjct: 477 WENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRK 536
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+ +T+ LHDV +QK+ LL +HSE+LA FG+I P I I KNLR+CGDCH+
Sbjct: 537 ISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSF 596
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K +S I +R++IVRD +RFHHF+DG CSCGD+W
Sbjct: 597 MKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 161/317 (50%), Gaps = 8/317 (2%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D FTL +L + A ++ GK HG AI GL + + LIN+Y KC + + + R+F
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ V+ ISWN++IAG N E LK F +M + + SS + ACA +
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
KQLH I+ D + F+ ++ LD+YAKC I+ A +F+ M V+W+++ G
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
+G + + LF+ +++G++ ++L+ C+ LI + + +++ +G +
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEG-TQVHAVIVKHGFHRNL 293
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
++ D+ + G+++++YE ++M +NV W ++++ H + A + EK+
Sbjct: 294 FVATSLVDVYAKCGQIEKSYEVFADM---EEKNVVLWNAMIASFSRHAHSWEAMILFEKM 350
Query: 338 FMID--PNNMGAYVILS 352
+ PN + ILS
Sbjct: 351 QQVGIFPNEVTYLSILS 367
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 325/515 (63%), Gaps = 2/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW T+I G +G Y EA + M T ++++ A + G
Sbjct: 193 MPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPG 252
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H AI+ GL ++ + +LI+MY+KC +ED+H +F +P K + WNSIIAG +
Sbjct: 253 RQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALH 312
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + +M + +K H +FS I+ C+ L ++ KQ+H ++RNGF ++
Sbjct: 313 GYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVAN 372
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D Y+K G + AR +FD+M +I+SW A+I G HG+ +AI +FE+M ++G+
Sbjct: 373 TALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMM 432
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+AVL+ACS +GL ++ W F SMT+D+ + P H+A + +LLGR G L EAY
Sbjct: 433 PNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYA 492
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I PT N+W LL ACRVH N+EL AEK++ ++P + Y++L N Y ++ +
Sbjct: 493 LIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGK 552
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
K+AA + ++ KG++ PACSWIEV N+ +AF++GDK H ++ + EL+ + +
Sbjct: 553 LKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISK 612
Query: 421 EGYVPDTKE-VLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP+ + +L DV+E ++K + YHSE+LAI +G++ T + T ++I+++ R+C DCH+
Sbjct: 613 LGYVPEEQNFMLPDVDENEEK-IRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHS 671
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK I+ I +REI++RD SRFHHF DG CSCGDYW
Sbjct: 672 VIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 159/302 (52%), Gaps = 13/302 (4%)
Query: 58 IKG-KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
I+G K + Y + +G + + + + ++ M+ KC + D+ RLF +P ++A+SW +II+G
Sbjct: 148 IRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISG 207
Query: 117 CVQNGLFDEGLKFFRQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
V +G + E + F M PR +F++++ A A L + G+QLH C I+ G
Sbjct: 208 YVDSGNYVEAFRLFILMREEFYDCGPR--TFATMIRASAGLEIIFPGRQLHSCAIKAGLG 265
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F++ +L+DMY+KCG++ A C+FD+M IV W ++I G ALHG + +A+ L+ +M
Sbjct: 266 QDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEM 325
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
GVK + F ++ CS + +A S+ ++ G A+ D + GK
Sbjct: 326 RDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRN-GFGLDVVANTALVDFYSKWGK 384
Query: 295 LQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVI 350
+ +A M N+ W L++ H + E A + EK+ + PN++ +
Sbjct: 385 VDDARHVFDRM---SCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAV 441
Query: 351 LS 352
LS
Sbjct: 442 LS 443
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 142 HVSFSS---IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
HV +S+ ++ AC L ++ K+L ++ NGF+ + ++ + +L M+ KCG + A
Sbjct: 129 HVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACR 188
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD+M + VSW +I G GN +A LF M ++ F ++ A + +
Sbjct: 189 LFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEI 248
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLT 316
I + K G+ A+ D+ + G L++A+ M P + + W +
Sbjct: 249 IFPGRQLHSCAIKA-GLGQDIFVSCALIDMYSKCGSLEDAHCVFDEM---PDKTIVGWNS 304
Query: 317 LLSACRVHKNVELA 330
+++ +H E A
Sbjct: 305 IIAGYALHGYSEEA 318
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/577 (38%), Positives = 330/577 (57%), Gaps = 63/577 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-DSFTLSSVLPIFADYVDVIK 59
+P D WNT+I + +E++++ QM + P DS++LS V+ D
Sbjct: 64 IPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGN 123
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS------------------------ 95
G+++H ++ GL +++ + ++LI MYAK +E +
Sbjct: 124 GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR 183
Query: 96 -------HRLFCLLPVKDAISWNSIIAGCVQNG-------LFD----------------- 124
H LF +P +D +SWN++I G G LFD
Sbjct: 184 VGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAY 243
Query: 125 -------EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
E L+ F +M +A + P V+ S++ AC + L +GK +H CI RN + ++
Sbjct: 244 AKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDL 303
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ +SL+DMYAKCG+I + +F+ M+ D+ +W+A+IMG A HG A+ F +M +
Sbjct: 304 KLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE 363
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+KPN V F+ VL+ACSH GL+D+ W+YF SM+K Y ++P EHY V D+LGRAG+LQE
Sbjct: 364 DIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQE 423
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A E I +M P VW LL ACR++KNVE+A + + ++P+ G YV+LSN Y+
Sbjct: 424 AMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQ 483
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A+ W ++R M+N ++K P S IEV N + FVAGD+SHP +I L E+ R
Sbjct: 484 AKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITAR 543
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GY P T VL D +E++K+N L +HSE+LAI FG++ T G+TIRI+KNLRVC DC
Sbjct: 544 LKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDC 603
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H AIK IS+ +R IIVRD +RFHHF +G CSC DYW
Sbjct: 604 HIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 66/262 (25%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVED---SHRLFCLLPVKDAISWNSIIAGCV 118
+IH I+ LD N + + L+ C+ D + +F +P D WN++I +
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80
Query: 119 QNGLFDEGLKFFRQMLIAKIKP-RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ E + F QM + P S S ++ AC L G++LH +++ G ++
Sbjct: 81 NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140
Query: 178 FIASSLLDMYAKCGNIRLARCI-------------------------------FDKMDLH 206
F+ ++L++MYAK G+I +AR I FD+M
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPER 200
Query: 207 DIVSWTAVIMGNALHGN-------------------------------AHDAISLFEQME 235
D+VSW +I G+A G+ +++A+ LF +M+
Sbjct: 201 DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQ 260
Query: 236 KDGVKPNSVAFVAVLTACSHAG 257
V P+ V V+VL+AC G
Sbjct: 261 LANVLPDKVTMVSVLSACGDVG 282
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG---NIRLARCIFDKMD 204
+M + T L+ Q+H II+ D N F+ + LL C ++ AR +FD++
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP-NSVAFVAVLTAC 253
D W +I N +++SLF QM P +S + V+ AC
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQAC 115
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 313/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + +L+SWN++I + +++AL + R M ++PD ++L
Sbjct: 423 LELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTR 482
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H GL + + +SL+NMYAK ++ + + + + +WN +I G +
Sbjct: 483 KLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALH 542
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ ++++ + I V+F S++ AC T+L GK +H + G D ++ +
Sbjct: 543 GRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVK 602
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L +MY+KCG++ AR IFD M + VSW ++ A HG + + + L +ME++GVK
Sbjct: 603 NALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVK 662
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + FV+VL++CSHAGLI + YF+S+ D GI EHY + DLLGRAGKLQEA +
Sbjct: 663 LNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 722
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+IS M P W +LL ACRV K+++ A K+ +DP N A V+LSN Y+
Sbjct: 723 YISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGD 782
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+AA LR M ++ +KK P S I+VKNK + F D SHP I + ++EL M +
Sbjct: 783 WKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMRE 842
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDTK VLHDV+EEQK++LL YHSE+LAI FG+I TP+ +++ I KNLRVC DCHTA
Sbjct: 843 AGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTA 902
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKI REI+VRDN RFHHF DG CSC DYW
Sbjct: 903 TKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 167/338 (49%), Gaps = 4/338 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +WN++I + + EA I ++M + D T S+L + + G
Sbjct: 221 MPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHG 280
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + + ++ +G++LI MYA+C ED+ ++F + + I+W++II +
Sbjct: 281 KHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADH 340
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L++FR M I P V+F S++ + L ++H I +G DD +
Sbjct: 341 GHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMR 400
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGV 239
++L+++Y +C + AR +FD+++L +++SW ++I G + H DA+ LF M++ G+
Sbjct: 401 NALVNVYGRCESPDDARTVFDQLELPNLISWNSMI-GIYVQCERHDDALQLFRTMQQQGI 459
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V F+ +L AC+ G + + ++ G+ S ++ ++ +AG+L A
Sbjct: 460 QPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAE 518
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ M W L++ +H A + +K+
Sbjct: 519 VILQEMDEQQI-TAWNVLINGYALHGRSREALEAYQKL 555
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 138/250 (55%), Gaps = 1/250 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN +I + ++EAL + M + P++ TL +VL + ++ G +H
Sbjct: 22 NVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVH 81
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG-CVQNGLF 123
++ G N + ++L+NMY KC + D+ +F + K+ ++WN+++ +Q +
Sbjct: 82 ALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCW 141
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ F +ML+ +K ++F +++ + L GK +H C+ + ++F+ ++L
Sbjct: 142 KLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTAL 201
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++ Y KCG++ AR +FD M + +W ++I ++ + +A +F++M+++G + +
Sbjct: 202 VNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDR 261
Query: 244 VAFVAVLTAC 253
V F+++L AC
Sbjct: 262 VTFLSILDAC 271
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
M ++V+WN ++ + G ++ A+ + +M +K + T +VL D + K
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK IH +V + ++L+N Y KC + D+ ++F +P + +WNS+I+
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ E F++M + V+F SI+ AC + TL GK + I F+ ++F+
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MYA+C + A +F +M ++++W+A+I A HG+ +A+ F M+++G+
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
PN V F+++L + +++ S + + ++G+ + A+ ++ GR
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEE-LSRIHLLITEHGLDDTTTMRNALVNVYGR 409
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 170/381 (44%), Gaps = 59/381 (15%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY++C + D+ F + ++ +SWN +I+ F E L F ML+ + P ++
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+++ +C L G +H + GF N +A++LL+MY KCG + A+ +F++M
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 205 LHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++V+W A++ +L G A+ LF +M +GVK N + F+ VL + + K
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG- 179
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+ +S ++ + A+ + + G L +A + M P +V W +++SA
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM---PCRSVGTWNSMISAY 236
Query: 322 RVH----------KNVELAGKVAEKIFM-------IDPNNM--GAYV------------- 349
+ + ++ G+ +++ ++P + G +V
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296
Query: 350 ----ILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYH 405
L YA R +DAA +VF R MK+T +W + A+A D H
Sbjct: 297 FVGTALITMYARCRSPEDAA--QVFGR---MKQTNLITWSAIIT-AFA----DHGH---- 342
Query: 406 RINEALKELLERMEQEGYVPD 426
EAL+ M+QEG +P+
Sbjct: 343 -CGEALR-YFRMMQQEGILPN 361
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 297/444 (66%), Gaps = 1/444 (0%)
Query: 71 GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFF 130
GL+A +G+SL+NMY +C + ++ +F +P KDAI+WN+I+ Q+G E L+ F
Sbjct: 6 GLEAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIF 65
Query: 131 RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
++M +K +F S++ ACA + L LG+ +H ++ NG D + +A++L++MYAKC
Sbjct: 66 QRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKC 125
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G + AR +FD+M+ D+V+WTA++ G+A HG+ ++ L +ME +G+KPN+V F++++
Sbjct: 126 GKLVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLV 185
Query: 251 TACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPT 310
ACSH+G +D+A F +M D+G P EH+ V DLLGR G+L+EA E I M P
Sbjct: 186 FACSHSGYLDEARDCFIAMA-DHGFFPLPEHFRCVIDLLGRGGRLEEAQEVIDTMPFEPG 244
Query: 311 ENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVF 370
WLT+LSACR+ K+V A AEK + I+P AY+++SN YAA RW D +R
Sbjct: 245 LTAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVKKVRRL 304
Query: 371 MRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEV 430
M +G+KK P S IEVKN+ + F A +KSHP I E L++L +++ GYVPDT V
Sbjct: 305 MERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLIYEELRKLTLEIKEAGYVPDTSLV 364
Query: 431 LHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQR 490
LH+V+EE K+ L++HSERLA+V+G+I TP GT++ ++ NLR+C DCHTA K+IS I R
Sbjct: 365 LHNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCHTAFKYISTISNR 424
Query: 491 EIIVRDNSRFHHFEDGKCSCGDYW 514
EI+VRD +RFH F G CSC DYW
Sbjct: 425 EIVVRDANRFHTFATGGCSCKDYW 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 129/254 (50%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D ++WN ++ A++G +EAL I ++M +K S T SVL A + G
Sbjct: 37 IPCKDAITWNAIVTAYAQDGYGKEALEIFQRMQQEGVKTGSATFISVLEACASTSALALG 96
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + +GLD + + ++L+NMYAKC ++ ++ +F + D ++W +I+AG Q+
Sbjct: 97 RVIHQNLVANGLDRELIVATALVNMYAKCGKLVEAREVFDQMEGMDVVAWTAIVAGSAQH 156
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E R+M + IKP +V+F S++ AC+H L + + +GF
Sbjct: 157 GHIEESKDLMRRMELEGIKPNNVTFLSLVFACSHSGYLDEARDCFIAMADHGFFPLPEHF 216
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHD-IVSWTAVIMGNALHGNAHDA-ISLFEQMEKDG 238
++D+ + G + A+ + D M + +W ++ L + A I+ + E +
Sbjct: 217 RCVIDLLGRGGRLEEAQEVIDTMPFEPGLTAWLTMLSACRLQKDVLRAEIAAEKCYEIEP 276
Query: 239 VKPNSVAFVAVLTA 252
+P++ ++ L A
Sbjct: 277 TRPSAYLLMSNLYA 290
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/520 (41%), Positives = 327/520 (62%), Gaps = 20/520 (3%)
Query: 10 NTVIV-----GLARNGLYEEALNIVRQMGNVNLKPDSFTL---SSVLPIF---ADYVDVI 58
N VIV G RN L +L + R M + DS ++ ++ L F A D
Sbjct: 14 NPVIVTAMASGYVRNNLVYHSLELFRAM----IASDSASVVDEAAALVAFSASARVPDRG 69
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNSIIAG 116
+H + G + N + +++++ YAK +E + ++F + +D +SWNS+IA
Sbjct: 70 VTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIAL 128
Query: 117 CVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
QNG+ E + + +ML IK V+ S+++ ACAH + GK +H ++R G +
Sbjct: 129 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLE 188
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+N+++ +S++DMY+KCG + +A F K+ +I+SW+A+I G +HG +A+ +F +M
Sbjct: 189 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 248
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
++ G++PN + F++VL ACSHAGL+D+ ++N+M +++GI EHY + DLLGRAG
Sbjct: 249 KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGC 308
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
L EAY I M P +W LLSACR+HKNVELA +++F +D +N G YV+LSN
Sbjct: 309 LDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNI 368
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
YA A WKD +R+ ++ + ++K P S E+K K Y F GDKSHP + I L++L
Sbjct: 369 YAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 428
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
LERM++ GYVP+T VLHD++EE+K++ L HSE+LA+ F ++ + + I IIKNLRVC
Sbjct: 429 LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVC 488
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCHTA+KFI+KI +REII+RD RFHHF+DG CSC DYW
Sbjct: 489 SDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 140/259 (54%), Gaps = 7/259 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNV--NLKPDSFTLSSVLPIFADYVDVIKGKE 62
D+VSWN++I A+NG+ EA+ + +M NV +K ++ LS+VL A + GK
Sbjct: 118 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKH 177
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH +R GL+ NV +G+S+++MY+KC RVE + R F + K+ +SW+++I G +G
Sbjct: 178 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 237
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIAS 181
E L+ F +M + ++P +++F S++ AC+H L G+ + + + G + +
Sbjct: 238 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 297
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA-ISLFEQMEKDGV 239
++D+ + G + A + +M + D W A++ +H N A +S+ E D
Sbjct: 298 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDA- 356
Query: 240 KPNSVAFVAVLTACSHAGL 258
NS +V + + AG+
Sbjct: 357 -SNSGYYVLLSNIYAEAGM 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML------IAKIKPRHVSFSS 147
D+ R F +P + + ++ +G V+N L L+ FR M+ + V+FS
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFS- 60
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG--NIRLARCIFDKMDL 205
A A + + LH I + GF+ N + +++LD YAK G ++ +AR +FD M+
Sbjct: 61 ---ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME- 116
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEK--DGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+VSW ++I A +G + +AI L+ +M G+K N+VA AVL AC+HAG I
Sbjct: 117 RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGK 176
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
N + + G+ + ++ D+ + G+++ A
Sbjct: 177 HIHNQVVR-MGLEENVYVGTSIVDMYSKCGRVEMA 210
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/489 (41%), Positives = 309/489 (63%), Gaps = 1/489 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+W +I G ++N +AL + QM + L+P+ FTLSS+L + G
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPG 208
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H + +++G ++V +GS+L++MYA+C ++ + F +P K +SWN++I+G +
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L +M +P H ++SS+ ACA + L GK +H +I++G FI
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G+I A+ +FD++ D+VSW ++ G A HG + + FEQM + G++
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++F+ VLTACSH+GL+D+ YF M K Y + P HY DLLGR G L A
Sbjct: 389 PNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT VW LL ACR+HKN+EL AE+ F +DP++ G ++LSN YA+A R
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+D A +R M+ G+KK PACSW+E++N + FVA D++HP I +E+ ++++
Sbjct: 508 WRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKE 567
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT VL V++++++ L YHSE+LA+ F ++ TP G+ IRI KN+RVCGDCH A
Sbjct: 568 IGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAA 627
Query: 481 IKFISKIVQ 489
IKF+SKI +
Sbjct: 628 IKFVSKIYE 636
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 174/338 (51%), Gaps = 12/338 (3%)
Query: 19 NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI-RHGLDANVC 77
GLY AL+++++ +L PD S +L V +G+ +H + + H LD ++
Sbjct: 70 TGLY--ALDLIQRG---SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + ++NMYAKC ++D+ R+F +P KD ++W ++IAG QN + L F QML
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
++P H + SS++ A L G QLH ++ G+ ++++ S+L+DMYA+CG++ A+
Sbjct: 185 LQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
FD M VSW A+I G+A G A+ L +M++ +P + +V +AC+ G
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIG 304
Query: 258 LIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
+++ W + + + + + + D+ +AG + +A + P W T
Sbjct: 305 ALEQGKWVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNT 361
Query: 317 LLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+L+ C H + E++ I+PN + +L+
Sbjct: 362 MLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 317/514 (61%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V+W+T++ G G +A+ + +M L+ D + V+ A D G
Sbjct: 164 MRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMG 223
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HGY +RH + +V I +SL++MYAK + + R+F L+P ++ +SW+++I+ Q
Sbjct: 224 ASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQY 283
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L FR M ++ + P + AC+ L L LGK +HG I+R D M +
Sbjct: 284 GNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRM-VG 342
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMY+KCG++ A+ +FDK+ D++SW +I HG DA+SLF++M+++ V+
Sbjct: 343 TAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVR 402
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F ++L+A SH+GL+++ +FN M +YGI P +H + DLL R+G ++EA
Sbjct: 403 PDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANG 462
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++++H+ PT ++ + LLS C + +EL AEKI + P ++G ++SN YAAA+
Sbjct: 463 LVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKN 522
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ G KK P CS IE++ + FV D+SHP + +I + + +L M +
Sbjct: 523 WYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRK 582
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P T+ V HD+EE K+ LL HSERLA FG++ T GT + +IKNLRVCGDCH A
Sbjct: 583 MGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDA 642
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK++SKI REI+VRD RFHHF+DG CSCGDYW
Sbjct: 643 IKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 139/256 (54%), Gaps = 1/256 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S + +WN ++ +R EAL + R + +PDS T + L A D+ G+ +
Sbjct: 67 SSIPAWNALLAAHSRGASPHEALRVFRALPPAA-RPDSTTFTLALSACARLGDLATGEVV 125
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
A G ++ + SS++N+YAKC ++D+ ++F + +D ++W++++ G V G
Sbjct: 126 TDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQP 185
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ ++ + +M ++ V +M ACA +G +HG ++R+ ++ I++SL
Sbjct: 186 VQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSL 245
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMYAK G AR +F+ M + VSW+A+I A +GNA +A+ LF M+ G+ PNS
Sbjct: 246 VDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNS 305
Query: 244 VAFVAVLTACSHAGLI 259
V L ACS GL+
Sbjct: 306 GPVVGALLACSDLGLL 321
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/509 (41%), Positives = 315/509 (61%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V WN +I +NG + E + + + M V + D TL SV+ D GK +
Sbjct: 185 VVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAE 244
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
Y GL N + ++LI+MYAKC + + RLF + +D ++W+++I+G Q E
Sbjct: 245 YVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCRE 304
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L F +M +A+++P V+ S++ ACA L L GK +H I R + + ++L+D
Sbjct: 305 ALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVD 364
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
YAKCG I A F+ M + + +WTA+I G A +G +A+ LF M K ++P V
Sbjct: 365 FYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVT 424
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ VL ACSH+ L+++ +F+SMT+DYGI P EHY V DLLGRAG + EAY+FI M
Sbjct: 425 FIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTM 484
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P +W LLS+C VHKNVE+ + ++I ++P++ G Y++LSN YA+ +WK+AA
Sbjct: 485 PIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAA 544
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R M+++G++KTP CS IE+ F A D HP I + ++E+++R++ GY+P
Sbjct: 545 MIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIP 604
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
+T +V +V+E +K+ + +HSE+LAI FG++ G TIR+ KNLRVC DCH+A K IS
Sbjct: 605 NTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLIS 664
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ REI+VRD +RFHHF+DG CSC DYW
Sbjct: 665 KVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+N ++ L G E+AL++ +M +V ++ PD T++ L + + G+ I YA
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GL A+ + SSLI+MYA C V + LF + + WN+II ++NG + E +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ F+ ML + ++ S++ AC + LGK + + G N + ++L+DMY
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG + AR +FD M D+V+W+A+I G +A++LF +M+ V+PN V V
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+VL+AC+ G ++ + +S + ++ + A+ D + G + +A E +M
Sbjct: 326 SVLSACAVLGALETG-KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM-- 382
Query: 308 GPTENVW 314
P +N W
Sbjct: 383 -PVKNSW 388
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 2/236 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+W+ +I G + EAL + +M ++P+ T+ SVL A + G
Sbjct: 281 MQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETG 340
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y R L + +G++L++ YAKC ++D+ F +PVK++ +W ++I G N
Sbjct: 341 KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 400
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M A I+P V+F ++ AC+H + G++ + ++ G
Sbjct: 401 GRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEH 460
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM 234
++D+ + G I A M + + V W A++ A+H N +Q+
Sbjct: 461 YGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQI 516
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 324/515 (62%), Gaps = 6/515 (1%)
Query: 6 LVSWNTVIVGLARN-GLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++SW +I G +N L EA+N+ +M +++P+ FT SS + D GK++
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
G A + GL +N + +S+I+M+ K R+ED+ R F L K+ +S+N+ + G +N F
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ K ++ ++ +F+S++ A++ ++ G+Q+H +++ G N + ++L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY+KCG+I A +F+ M+ +++SWT++I G A HG A + F QM ++GVKPN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V +VA+L+ACSH GL+ + W +FNSM +D+ I P EHYA + DLL RAG L +A+EFI+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M VW T L ACRVH N EL A KI +DPN AY+ LSN YA A +W++
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+ +R M+ + + K CSWIEV +K + F GD +HP H+I + L L+ +++ GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 424 VPDTKEVLHDV----EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
VPDT VLH + +E +K+ LLY HSE++A+ FG+I T +R+ KNLRVCGDCH
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 815
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K+IS + REI++RD +RFHHF+DGKCSC DYW
Sbjct: 816 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 148/258 (57%), Gaps = 9/258 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+ ++ NG +A+ + + + L P+ + ++V+ ++ V G+
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ ++ G +++VC+G SLI+M+ K E+++++F + + ++W +I C+Q G
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E ++FF M+++ + + SS+ ACA L L LGKQLH IR+G D+ + S
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECS 307
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKDG 238
L+DMYAKC G++ R +FD+M+ H ++SWTA+I G + N A +AI+LF +M G
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 239 -VKPNSVAFVAVLTACSH 255
V+PN F + AC +
Sbjct: 368 HVEPNHFTFSSAFKACGN 385
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVS+NT + G RN +E+A ++ ++ L +FT +S+L A+ + KG++IH
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ GL N + ++LI+MY+KC ++ + R+F + ++ ISW S+I G ++G
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSL 183
L+ F QM+ +KP V++ +I+ AC+H+ + G + + + M + +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 184 LDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGVKP 241
+D+ + G + A + M D++ W + +H N ++ + +E D +P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 242 NSVAFVAVLTACS 254
+ ++ + AC+
Sbjct: 678 AAYIQLSNIYACA 690
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 6/237 (2%)
Query: 25 ALNIVRQMGNVNLKP-DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLI 83
A++ + M ++P DS T SS+L D GK +H I ++ + + +SLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 84 NMYAKC---ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
++Y+K A+ ED +D +SW++++A NG + +K F + L + P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGN-IRLARC 198
+++++ AC++ + +G+ G +++ G F+ ++ + SL+DM+ K N A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+FDKM ++V+WT +I G +AI F M G + + +V +AC+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 138 IKPR-HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
I+P V+FSS++ +C LGK +H +I + + + +SL+ +Y+K G+ A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 197 RCIFDKMDL---HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+F+ M D+VSW+A++ +G DAI +F + + G+ PN + AV+ AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 254 SHAGLI 259
S++ +
Sbjct: 177 SNSDFV 182
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 319/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFT-LSSVLPIFADYVDVIK 59
MPV + V+W+ +I G EA N+ + M L S T ++S L + A D+
Sbjct: 266 MPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHM 325
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++H + G+ A++ +SL++MYAK + ++ F + VKD IS+ ++++GCVQ
Sbjct: 326 GTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ 385
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +E F++M ++P + S++PAC+HL L GK HG +I G I
Sbjct: 386 NGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+DMYAKCG I L+R +FDKM D+VSW +I G +HG +A +LF M+ G
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGF 505
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V F+ ++ ACSH+GL+ + +F++MT YGI P EHY + DLL R G L EAY
Sbjct: 506 APDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAY 565
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI +M VW LL ACR+HKN++L +V+ I + P G +V+LSN ++AA
Sbjct: 566 QFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAG 625
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+ +AA +R+ + KG KK+P SWIE+ +AFV GD+SHP I L ++ ++
Sbjct: 626 RFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIK 685
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY DT VL D+EEE+K+ L YHSE+LAI FG++ + TI + KNLRVCGDCHT
Sbjct: 686 KLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHT 745
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK+++ + R IIVRD +RFHHF++G+CSCG++W
Sbjct: 746 AIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D ++N +I + G + A+++ R M + P+ +T VL + VD+ G
Sbjct: 60 IPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAG 119
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH +A GL ++ + ++LI++Y +CAR + +F +P++D ++WN+++AG +
Sbjct: 120 RTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANH 179
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN--- 176
G++ + M ++P + S++P A L G +H +R + N
Sbjct: 180 GMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQ 239
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ I ++LLDMYAKC + A +F M + + V+W+A+I G L +A +LF+ M
Sbjct: 240 VLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLV 299
Query: 237 DGVKPNSVAFVA-VLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+G+ S VA L C A L D + +++ GI ++ + +AG
Sbjct: 300 EGLCFLSATSVASALRVC--ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL 357
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ EA F + T + + LLS C + E A V +K+
Sbjct: 358 INEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKKM 399
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ ++F +P DA ++N++I G F + +R ML ++ P +F ++ AC+
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L L G+ +H G ++F++++L+D+Y +C AR +F KM + D+V+W A+
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 215 IMGNALHGNAHDAIS-LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ G A HG H AI+ L + + G++PN+ V++L + G + + S
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L+ + G + LAR +FD++ D ++ A+I + G H AI L+ M + V PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 244 VAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
F VL ACS L+D +A ++ G+ A+ DL R +
Sbjct: 101 YTFPFVLKACS--ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF------- 151
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAG 331
GP NV+ + V N LAG
Sbjct: 152 -----GPARNVFAKMPMRDVVAWNAMLAG 175
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 326/546 (59%), Gaps = 35/546 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + N++I G L +A+ + M L PD FT S +F + +G
Sbjct: 38 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPS---LFKSCGVLCEG 94
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISW---------- 110
K++H ++ + G ++ I ++L+NMY+ C + + ++F + K +SW
Sbjct: 95 KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 154
Query: 111 ----------------------NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
N +I G V++ ++E L F +M ++ +K V+ +S+
Sbjct: 155 DLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASL 214
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC HL L LGK LH I + + ++ + ++L+DMYAKCG+I A +F +M D+
Sbjct: 215 LIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDV 274
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
++WTA+I+G A+ G A+ LF +M+ VKP+++ FV VL ACSHAGL+++ +YFNS
Sbjct: 275 MTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNS 334
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M YGI PS EHY + D+LGRAG++ EA + I NM P V + LLSACR+H N+
Sbjct: 335 MPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLV 394
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+A + A+++ +DP N G YV+LSN Y++ + W+ A +R M + +KK P CS IEV
Sbjct: 395 VAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVG 454
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
+ FV GD SHP I E L +++ R++ GYVPD EVL D++E++K+N L HSE
Sbjct: 455 GVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSE 514
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LAI FG++ T GT IR++KNLRVC DCH+A+KFIS++ REIIVRD +RFHHF G C
Sbjct: 515 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 574
Query: 509 SCGDYW 514
SC D+W
Sbjct: 575 SCRDFW 580
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +P + NSII G L + + F++ M++ + P +F S+ +C L
Sbjct: 34 VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 93
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
GKQLH + GF + +I ++L++MY+ CG + AR +FDKM +VSW +I
Sbjct: 94 ---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 150
Query: 218 NALHGNAHDAISLFEQME--------------------------------KDGVKPNSVA 245
A H+AI LF +ME GVK + V
Sbjct: 151 YAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 210
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++L AC+H G ++ + + + I A+ D+ + G ++ A M
Sbjct: 211 MASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 269
Query: 306 HAGPTENV--WLTLL 318
P ++V W L+
Sbjct: 270 ---PEKDVMTWTALI 281
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/508 (42%), Positives = 316/508 (62%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I AR+G E A+ + R M ++KPD+FT VL A +D+ G+E+H
Sbjct: 138 WNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRV 197
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+R +V + + LI+MYAKC ++++ +F ++DA WNS+IA C QNG E L
Sbjct: 198 MRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEAL 257
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
R M I P + S + A A + L G++LHG R GF + +SLLDMY
Sbjct: 258 TLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMY 317
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAF 246
AK G + +A +F+++ +++SW A+I G +HG+A A LF +M + V P+ + F
Sbjct: 318 AKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITF 377
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+AC+H G++ +A F+ M Y I P+ +HY + D+LG +G+ +EA + I M
Sbjct: 378 VGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGML 437
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W LL+ C++HKNVELA +K+ ++P + G YV+LSN YA + +W++AA
Sbjct: 438 VKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAAR 497
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M N+G+KK ACSWIE+K K + F+ GD SHP I E L+ L + Q GYVPD
Sbjct: 498 VRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPD 557
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V H+VE+++K+N+++ HSERLAI FG+I TP T + + KNLRVC DCH IK IS+
Sbjct: 558 TTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQ 617
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I QREII+RD +R+HHF +G+CSC D+W
Sbjct: 618 IEQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
V G+++H + G + + + L+++YA C V + R+F +P + + WN +I
Sbjct: 84 VRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIR 143
Query: 116 GCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
++G + ++ +R ML +KP + ++ ++ ACA L L G+++H ++R +
Sbjct: 144 AYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWA 203
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ + L+DMYAKCG + A +F+ + D W ++I +G +A++L M
Sbjct: 204 TDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNM 263
Query: 235 EKDGVKPN 242
+G+ P
Sbjct: 264 AAEGIAPT 271
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D WN++I +NG EAL + R M + P TL S + A + +G+E
Sbjct: 234 IRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRE 293
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HGY R G + + +SL++MYAK V +H LF L ++ ISWN++I G +G
Sbjct: 294 LHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGH 353
Query: 123 FDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFIA 180
D + F +M A++ P H++F ++ AC H + K++ ++ +
Sbjct: 354 ADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHY 413
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ L+D+ G + A + M + D W A++ G +H N
Sbjct: 414 TCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKN 457
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 7/244 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP- 140
L +M +K RL+ LLPV + + + L P
Sbjct: 7 LTSMLSKSTASPSPARLYHLLPVSSLQTTSDLRPAPNGASPPPPPPAQIPAFLSPCPSPY 66
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
H ++++I+ +C + G+QLH ++ +G + +A+ L+D+YA CG++ LAR +F
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 201 DKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGL 258
D+M + ++ W +I A G AI L+ M G +KP++ + VL AC A L
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKAC--AAL 184
Query: 259 ID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTL 317
+D A + A + D+ + G + EA+ ++ VW ++
Sbjct: 185 LDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAA-VWNSM 243
Query: 318 LSAC 321
++AC
Sbjct: 244 IAAC 247
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/514 (39%), Positives = 317/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +D+ +N V+ GL ++ EA+++++ + + ++ ++ T ++ + A D+ G
Sbjct: 184 VPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLG 243
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H ++ +D +V IGSS+I+MY KC V F L ++ +SW SIIA QN
Sbjct: 244 KQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQN 303
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F+E L F +M I I P + + + + A L+ L LG QLH ++G N+ +
Sbjct: 304 EFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVG 363
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G+I A+ +F M +I++W A+I G++ HG +A+S+F+ M G +
Sbjct: 364 NALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGER 423
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ V+ AC+H L+D+ + YFN + K + I P EHY + LL R+G+L EA
Sbjct: 424 PNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAEN 483
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ + W TLL+AC VHK+ + K+AE + ++P ++G Y++LSN +A RR
Sbjct: 484 FMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRR 543
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR + +KK P SW+E++N A+ F + D HP + I E +K+LL ++
Sbjct: 544 WDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRP 603
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD VLHD+E+EQK + L YHSE+LA+ +G++ TP G I +IKNLR+C DCHTA
Sbjct: 604 LGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTA 663
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISK+ R I+VRD +RFHHF++G CSCGDYW
Sbjct: 664 IKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 146/259 (56%), Gaps = 4/259 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSW+ ++ G +NG E + ++M N+ P+ + +++ + D ++
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAIS-SCDSQMYVE 141
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+ HGYA++ GL+ + + ++LI +Y+KC+ V + ++ +P D +N ++ G +Q
Sbjct: 142 GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ E + + ++ I+ + ++ +I CA L + LGKQ+H ++++ D +++I
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SS++DMY KCGN+ R FD++ ++VSWT++I + +A++LF +ME D +
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCI 321
Query: 240 KPNSVAFVAVLTACSHAGL 258
PN + S AGL
Sbjct: 322 PPNEYTMAVLFN--SAAGL 338
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 155/315 (49%), Gaps = 13/315 (4%)
Query: 47 VLPIFADYVDVIKGKEIHGYAI---RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
+L + AD ++ G+ IH + + D+ V +SLIN+Y KC V + +LF +P
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGK 162
++ +SW++++AG +QNG E + F++M++ I P ++ + +C + GK
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GK 143
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q HG +++G + + ++ ++L+ +Y+KC ++ A I + +DI + V+ G H
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+ +A+ + + + +G++ N+ +V + C+ I M K I
Sbjct: 204 HMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKS-DIDCDVYIG 262
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM- 339
+++ D+ G+ G + F + + NV W ++++A ++ E A + K+ +
Sbjct: 263 SSIIDMYGKCGNVLSGRTFFDRLQ---SRNVVSWTSIIAAYFQNEFFEEALNLFSKMEID 319
Query: 340 -IDPNNMGAYVILSN 353
I PN V+ ++
Sbjct: 320 CIPPNEYTMAVLFNS 334
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 313/544 (57%), Gaps = 38/544 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I GL N ++E++ I M L PDSFT +L A +D G ++HG +
Sbjct: 76 FNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVV 135
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK----------------------- 105
+ G +++ + +SL+++Y KC ++++ ++F +P K
Sbjct: 136 KAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAID 195
Query: 106 ---------------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
D +SW+S+I G NGL E L F +ML +P + ++
Sbjct: 196 MFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLC 255
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACA L L LG + RN F N + ++L+DMYAKCG + A +F M DIV
Sbjct: 256 ACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVV 315
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W A I G A+ G+ A LF QMEK G++P+ FV +L AC+HAGL+D+ YFNSM
Sbjct: 316 WNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSME 375
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ + + P EHY + DLLGRAG L EA++ + +M VW LL CR+H++ +L
Sbjct: 376 RVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLV 435
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
V +++ ++P+N G YV+LSN Y+A+ +W+DAA +R M +G+KK P SWIEV
Sbjct: 436 EGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGV 495
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ F+ GD SHP +I L EL++ ++ GYVP T VL D+EEE+K++ + HSE+L
Sbjct: 496 VHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKL 555
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG+I T IR++KNLRVCGDCH AIK IS+ REIIVRDN+RFH F DG CSC
Sbjct: 556 AIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSC 615
Query: 511 GDYW 514
DYW
Sbjct: 616 KDYW 619
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 41/284 (14%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H +R GLD + + + ++ SHR+F + +N++I G V N
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E ++ + M + P +F ++ ACA L LG +LHG +++ G + + F+
Sbjct: 87 DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146
Query: 181 SSLLDMYAKCGNI--------------------------------------RLARCIFDK 202
+SL+ +Y KCG I R A +FD
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M DIVSW+++I G A +G +A+ LF +M +G +P+ A V VL AC+ G ++
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266
Query: 263 WSYFNSMTKDYGIA-PSFEHYAAVADLLGRAGKLQEAYEFISNM 305
N M ++ + P A+ D+ + G++ A+E M
Sbjct: 267 NWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGM 308
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW+++I G A NGL +EAL++ +M N +PD + + VL A + G
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
R+ N +G++LI+MYAKC R++ + +F + KD + WN+ I+G +
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G F QM + I+P +F ++ AC H + G+Q + R +
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM 234
++D+ + G + A + M + + + W A++ G LH + + +Q+
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQL 442
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 302/510 (59%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SWN + GL G+Y+ L I M P+ +T S+L + DV G+++H
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ I++ LD N + ++LI+MYAKC +ED+ F L V+D +W II Q +
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGE 599
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L +FRQM +KP + + + C+ L +L G+QLH + ++G +MF+ S+L+
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + A +F+ + D ++W +I G A +G + A++ F M +G+ P+ V
Sbjct: 660 DMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGV 719
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +L+ACSH GL+++ +FNSM +D+GI+P+ +H A + D+LGR GK E +FI
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQK 779
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M +W T+L A ++H N+ L K A K+F + P +Y++LSN +A RW D
Sbjct: 780 MQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDV 839
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M +KG+KK P CSW+E + + FV+ D SHP I+ L EL + YV
Sbjct: 840 KRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYV 899
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P T+ VLH+V E +KK L +HSERLA+ F +I T IRI KNLR+C DCH +K I
Sbjct: 900 PKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHI 959
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S I +EI+VRD RFHHF++G CSC D+W
Sbjct: 960 SSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 156/294 (53%), Gaps = 1/294 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V W+ +I L + G EE++ + M + P+ +T+ S+L + ++ G+ IH
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIH 438
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++G + +V + ++L+ MY K V D +L+ + +D ISWN+ ++G G++D
Sbjct: 439 ACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYD 498
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L F ML P +F SI+ +C+ L +H G+Q+H II+N DDN F+ ++L+
Sbjct: 499 RPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALI 558
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKC + A F+++ + D+ +WT +I A A++ F QM+++GVKPN
Sbjct: 559 DMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEF 618
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
L+ CS ++ +SM G +A+ D+ + G ++EA
Sbjct: 619 TLAGCLSGCSSLASLEGG-QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 5/289 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW +I GL G +++ + ++M N + P+ FTL++ L + + + G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A + GL ++ +GS+L+++YAKC +E + ++F +P ++ ++WN ++ G Q
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G LK F M+ +K + ++++ CA+ L G+ +H II+ G++ N FI
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KCG A +F + DIV W+A+I G + ++I LF M
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
PN ++L+A ++ G + S + K YG FE AV++ L
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWK-YG----FETDVAVSNAL 456
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 135/254 (53%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+WN ++ G A+ G L + M +++K + FTL++VL A+ ++ +G
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH I+ G + N IG L++MY+KC D+ +F + D + W+++I Q
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E +K F M + P + S++ A + L G+ +H C+ + GF+ ++ ++
Sbjct: 394 GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVS 453
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G + +++ M D++SW A + G G +++F M ++G
Sbjct: 454 NALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI 513
Query: 241 PNSVAFVAVLTACS 254
PN F+++L +CS
Sbjct: 514 PNMYTFISILGSCS 527
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V DL +W +I A+ E+ALN RQM +KP+ FTL+ L + + G
Sbjct: 577 LSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + G +++ +GS+L++MYAKC +E++ LF L +D I+WN+II G QN
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ L FR ML I P V+F+ I+ AC+H + GK+ + R+ G +
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGN 223
+ ++D+ + G KM L + + W V+ + +H N
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNN 801
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 104/197 (52%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K IHG ++ ++ + + SL+N+YAKC + + +P +D +SW ++I G V
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G ++ + F++M I P + ++ + AC+ L LGKQ+H + G ++F+
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+D+YAKCG I LA +F M + V+W ++ G A G+ + LF M + V
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310
Query: 240 KPNSVAFVAVLTACSHA 256
K N VL C+++
Sbjct: 311 KCNEFTLTTVLKGCANS 327
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+SS++ CA +L + K +HG I+++ + + + SL+++YAKC AR + KM
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+VSWTA+I G G A+D+I LF++M+ +G+ PN L ACS +D
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-K 233
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSA 320
++ G+ +A+ DL + G+++ A + M P +N W LL+
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGM---PEQNDVTWNVLLNG 288
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/516 (41%), Positives = 320/516 (62%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP DL+ WN +I G + +G + E L++ +M ++L + TL+SVL A +
Sbjct: 367 MPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAIC 426
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+++H A + GL ++ + + LI+ Y KC +++ + ++F D IS +++
Sbjct: 427 HTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALS 486
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q ++ +K F QML ++P SS++ AC L+ GKQ+H +I+ F ++F
Sbjct: 487 QCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVF 546
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L+ YAKCG+I A F + IVSW+A+I G A HG+ A+ LF +M +G
Sbjct: 547 AGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEG 606
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V PN + +VL+AC+HAGL+D A YF SM + +GI + EHYA + D+LGRAGKL++A
Sbjct: 607 VAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDA 666
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E ++NM VW LL A RVH++ EL AEK+F ++P G +V+L+NTYA+A
Sbjct: 667 MELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASA 726
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
W + A +R M++ +KK PA SW+E+K+K + F+ GDKSHP I L EL + M
Sbjct: 727 GMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLM 786
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVP+ + LHDV+ +K+ LL +HSERLA+ F +I TP G IR+ KNLR+C DCH
Sbjct: 787 NKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCH 846
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+ISKIV REII+RD +RFHHF +G CSCGDYW
Sbjct: 847 VAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 169/323 (52%), Gaps = 17/323 (5%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW++++ + NG+ +AL R M + + F L VL D V G ++H
Sbjct: 69 VSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQVHAL 125
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLF----CLLPVKDAISWNSIIAGCVQNGL 122
A+ L +V + ++L+ +Y V+++ R+F + ++A+SWN++I+ V+N
Sbjct: 126 AVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQ 185
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + FR+M+ + +P FS ++ AC L G+Q+HG ++R G++ ++F A++
Sbjct: 186 SGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANA 245
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMY+K G+I +A +F+KM D+VSW A I G HG+ H A+ L QM+ G+ PN
Sbjct: 246 LVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPN 305
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA--DLLGRAGKLQEAYE 300
+VL AC+ AG + M K F+ + AV D+ + G L +A +
Sbjct: 306 VFTLSSVLKACAGAGAFNLGRQIHGFMVK---AVADFDEFVAVGLVDMYAKHGFLDDARK 362
Query: 301 FISNMHAGPTEN--VWLTLLSAC 321
M P + +W L+S C
Sbjct: 363 VFDFM---PRRDLILWNALISGC 382
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 141/254 (55%), Gaps = 4/254 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSWNT+I +N +A+ + R+M +P+ F S V+ D+ G+++HG
Sbjct: 171 VSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGA 230
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R G + +V ++L++MY+K +E + +F +P D +SWN+ I+GCV +G
Sbjct: 231 VVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRA 290
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ QM + + P + SS++ ACA +LG+Q+HG +++ D + F+A L+DM
Sbjct: 291 LELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDM 350
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG----VKPN 242
YAK G + AR +FD M D++ W A+I G + G + +SLF +M K+G V
Sbjct: 351 YAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRT 410
Query: 243 SVAFVAVLTACSHA 256
++A V TA S A
Sbjct: 411 TLASVLKSTASSEA 424
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 2/256 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +D+VSWN I G +G AL ++ QM + L P+ FTLSSVL A G
Sbjct: 266 MPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLG 325
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG+ ++ D + + L++MYAK ++D+ ++F +P +D I WN++I+GC +
Sbjct: 326 RQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHD 385
Query: 121 GLFDEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G E L F +M + + +S++ + A + +Q+H + G +
Sbjct: 386 GRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSH 445
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+D Y KCG + A +F + DI+S T ++ + + DAI LF QM + G
Sbjct: 446 VINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 239 VKPNSVAFVAVLTACS 254
++P+S ++L AC+
Sbjct: 506 LEPDSFVLSSLLNACT 521
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 11/286 (3%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T+ S L F + G +H + ++ GL A + L+ +Y++C + +F +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S++ NG+ + L FR M + + ++ CA + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA--PDVRFGA 120
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM----DLHDIVSWTAVIMGN 218
Q+H + ++F+A++L+ +Y G + AR +FD+ + VSW +I
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ + DAI +F +M G +PN F V+ AC+ + ++ ++ + G
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT-GYEKD 239
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
A+ D+ + G ++ A M A + W +S C H
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKMPAADVVS-WNAFISGCVTH 284
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/515 (43%), Positives = 325/515 (63%), Gaps = 9/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D SWNT+I G AR G E+A + M ++ + + ++++ + + D+ K
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA 205
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
A G V +++I Y K +VE + +F + V K+ ++WN++I+G V+
Sbjct: 206 SHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVE 261
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N ++GLK FR ML I+P SS + C+ L+ L LG+Q+H + ++ +++
Sbjct: 262 NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA 321
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MY KCG + A +F+ M D+V+W A+I G A HGNA A+ LF +M + +
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI 381
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + FVAVL AC+HAGL++ +YF SM +DY + P +HY + DLLGRAGKL+EA
Sbjct: 382 RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEAL 441
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P V+ TLL ACRVHKNVELA AEK+ ++ N YV L+N YA+
Sbjct: 442 KLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKN 501
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D A +R M+ + K P SWIE++NK + F + D+ HP I++ LKEL ++M+
Sbjct: 502 RWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMK 561
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY P+ + LH+VEEEQK+ LL +HSE+LA+ FG I P G+ I++ KNLR+CGDCH
Sbjct: 562 LAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHK 621
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFIS+I +REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 622 AIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 105/250 (42%), Gaps = 11/250 (4%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+++ Y + E + F +P KDA SWN++I G + G ++ + F M+ +
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM----EKN 185
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
VS+++++ L G + ++++ Y K + LA +F
Sbjct: 186 EVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFK 241
Query: 202 KMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
M ++ ++V+W A+I G + D + LF M ++G++PNS + L CS +
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
++K + ++ + + G+L +A++ M W ++S
Sbjct: 302 LGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV-AWNAMISG 359
Query: 321 CRVHKNVELA 330
H N + A
Sbjct: 360 YAQHGNADKA 369
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
N IIA CV++G D L+ F M + I + + H QL I
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAH---QLFDEIP- 120
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
+ + F + +L Y + N A+ FD+M D SW +I G A G A L
Sbjct: 121 ---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F M ++ N V++ A+++ G ++KA +F +AP A A + G
Sbjct: 178 FYSM----MEKNEVSWNAMISGYIECGDLEKASHFFK-------VAPVRGVVAWTAMITG 226
Query: 291 --RAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+A K++ A +M W ++S
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/507 (42%), Positives = 320/507 (63%), Gaps = 5/507 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKE 62
++ + N + LA+N + A+ Q+ + N PD FT +SVL A V+ G++
Sbjct: 54 NIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQK 113
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSIIAGCVQN 120
IH + G ++N+ + +SLI+MY K + + LF + V+D + WN++IAG QN
Sbjct: 114 IHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQN 173
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + ++ FR M + P V+ S++PACAHL L LGK + G I R +F+
Sbjct: 174 EKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFL 233
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L DMYAKCG I AR +F+KM+ D++SW+ +I G A++G+A +A F +M G
Sbjct: 234 GNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGE 293
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN V F+ +LTAC+HAGL+ K + FN+M K+YG++P EHY V DLL RAG+L +A
Sbjct: 294 KPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAE 353
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ IS+M P +W LL CR++++ +V + I +D ++ G+YV L+N Y++
Sbjct: 354 DMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMG 413
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R DAA R+ MR G+ KTP CSWIEV N + F GD SHP ++I ++EL+ +M+
Sbjct: 414 RLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMK 473
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY P T V+H ++EE+K++ L HSE+LAI FG+I T +GTTIR++KNLR+C DCH
Sbjct: 474 LAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHD 533
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDG 506
A K IS IV+REIIVRD SRFHHF+DG
Sbjct: 534 AAKIISGIVKREIIVRDRSRFHHFKDG 560
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 7/239 (2%)
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
+D N+ I LI A A V + +F L + + N+ + QN + ++FF
Sbjct: 21 VDPNL-IAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFN 79
Query: 132 QMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
+ + P +F+S++ ACA L + G+++H + + GF+ N+F+ +SL+DMY K
Sbjct: 80 HQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFK 139
Query: 190 CGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVKPNSVAF 246
G + LAR +FD+M + D +V W A+I G A + DAI +F M++ GV PN V
Sbjct: 140 AGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTL 199
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
V+VL AC+H G +D + + +A A+AD+ + G + EA + M
Sbjct: 200 VSVLPACAHLGALDLG-KWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKM 257
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SW+ +I GLA G +EA +M + KP+ +L V KG
Sbjct: 257 MEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKG 316
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ +G+ V ++++ ++ ++ + + +P+K + I W +++ GC
Sbjct: 317 LNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGC 375
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 195/481 (40%), Positives = 311/481 (64%), Gaps = 2/481 (0%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
++ + T +VL F + +G+ +H GL+ +V +G++L+NMY KC VE++
Sbjct: 5 GVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEA 64
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACA 153
F + + +SW++++A QNG L+ +R+M A+ + P V+F +++ AC+
Sbjct: 65 RAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACS 124
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L G+++H + GFD ++ + ++L++ Y +CG++ A+ +FD M D++SW++
Sbjct: 125 FLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSS 184
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I A G +A+ L+ +M +G P+ + F++VL ACS++G+++ + +F S+ D
Sbjct: 185 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDT 244
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ P+ EHYA + D+LGRAGKL++A + + M P +++T+LSAC+++ +VE
Sbjct: 245 QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAA 304
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
AE +F +DP N Y+ L+N Y+AA+R KDAA +R M +G+KK P CSWIEV ++ +
Sbjct: 305 AEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHE 364
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F+AGDK HP I ++ L +M++ GY DTK VL DVEE++K+NLL+YHSE+LAI
Sbjct: 365 FIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIA 424
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG+I TP G +RI+KNLRVC DCH A K ISK+ REI+VRD +RFHHF DG CSC DY
Sbjct: 425 FGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDY 484
Query: 514 W 514
W
Sbjct: 485 W 485
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNV--NLKPDSFTLSSVLPIFADYVDVIKGKE 62
++VSW+ ++ A+NG AL + R+MG+ + P+ T ++L + + +G++
Sbjct: 75 NVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRK 134
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH G D ++ + ++L+N Y +C + D+ +F + +D ISW+S+I+ Q G
Sbjct: 135 IHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGR 194
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIAS 181
DE ++ + +ML P + F S++ AC++ + I+ + + + +
Sbjct: 195 VDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYA 254
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLH 206
++D+ + G +R A + M H
Sbjct: 255 CMVDVLGRAGKLRDAEDLLRLMPFH 279
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 39/277 (14%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M I ++ V++ +++ +L G+++H + G + ++ + ++L++MY KC +
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFVAVL 250
+ AR F+K+ ++VSW+A++ A +G+A A+ L+ +M + G+ PN V F+ +L
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 251 TACS-----------HAGLIDKAWS----YFNSMTKDYGIAPSFEHYAAVADLLGR---- 291
ACS HA + ++ + N++ YG S V D + R
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVI 180
Query: 292 -----------AGKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAEKI 337
G++ EA E M + P + +++++L AC VE +G I
Sbjct: 181 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 240
Query: 338 F---MIDPNNMGAYVILSNTYAAARRWKDAASLRVFM 371
++P + Y + + A + +DA L M
Sbjct: 241 VGDTQVEP-TLEHYACMVDVLGRAGKLRDAEDLLRLM 276
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/475 (43%), Positives = 304/475 (64%), Gaps = 6/475 (1%)
Query: 42 FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
FT S +L VI E+H ++ + + +G++L++ Y K +VE++ ++F
Sbjct: 2 FTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHL 160
+ KD ++W++++AG Q G + +K F ++ IKP +FSSI+ CA ++
Sbjct: 58 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 117
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
GKQ HG I++ D ++ ++S+LL MYAK GNI A +F + D+VSW ++I G A
Sbjct: 118 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 177
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
HG A A+ +F++M+K VK + V F+ V AC+HAGL+++ YF+ M +D IAP+ E
Sbjct: 178 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 237
Query: 281 HYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI 340
H + + DL RAG+L++A + I NM +W T+L+ACRVHK EL AEKI +
Sbjct: 238 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 297
Query: 341 DPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS 400
P + AYV+LSN YA + W++ A +R M + +KK P SWIEVKNK Y+F+AGD+S
Sbjct: 298 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRS 357
Query: 401 HPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTP 460
HP +I L++L R++ GY PDT VL D+++E K+ +L HSERLAI FG+I TP
Sbjct: 358 HPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATP 417
Query: 461 DGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF-EDGKCSCGDYW 514
G+ + IIKNLRVCGDCH IK I+KI +REI+VRD++RFHHF DG CSCGD+W
Sbjct: 418 KGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 113/201 (56%), Gaps = 2/201 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI-FADYVDVIKGKEI 63
D+V+W+ ++ G A+ G E A+ + ++ +KP+ FT SS+L + A + +GK+
Sbjct: 62 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 121
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG+AI+ LD+++C+ S+L+ MYAK +E + +F KD +SWNS+I+G Q+G
Sbjct: 122 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 181
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASS 182
+ L F++M K+K V+F + AC H + G++ ++R+ S
Sbjct: 182 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 241
Query: 183 LLDMYAKCGNIRLARCIFDKM 203
++D+Y++ G + A + + M
Sbjct: 242 MVDLYSRAGQLEKAMKVIENM 262
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/517 (43%), Positives = 324/517 (62%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D ++++I ++ +E+L R+M N+ ++T S+V+ AD G
Sbjct: 78 IPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIG 137
Query: 61 KEIHG--YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ IH Y +GLDA V ++L++ YAK V + ++F +P K ++WNS+I+G
Sbjct: 138 ETIHCHVYICGYGLDAYV--QAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYE 195
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E ++ F M +KP +F S++ ACA + + LG +H I RN FD N+
Sbjct: 196 QNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVV 255
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L++MY++CGN+ AR +FD M+ +IV+WTA+I G +HG+ AI LF +M DG
Sbjct: 256 LGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDG 315
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+PN+V FVAVL+AC+HAGL+D+ F +M ++YG+ PS EH + D+LGRAG L EA
Sbjct: 316 PRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEA 375
Query: 299 YEFISNMHAG-PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
Y+FI N P VW +L AC++HKN +L +VAE + I+P N G YV+LSN YA
Sbjct: 376 YQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYAL 435
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R +R M +KK S I+V +K Y F GDKSHP ++I L EL+ R
Sbjct: 436 AGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSR 495
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ GY+P ++ V+H+VEEE+++ L YHSE+LAI FG++ T G IRI+KNLR+C DC
Sbjct: 496 CREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDC 555
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HTAIK+IS I REI VRD RFHHF+DG CSC DYW
Sbjct: 556 HTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 151/300 (50%), Gaps = 15/300 (5%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINM-YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH I GL + + L++ YA + + + RLF +P D ++S+I +
Sbjct: 36 QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSK 95
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E L +R+ML+A I + +FS+++ + A LT +G+ +H + G+ + ++
Sbjct: 96 FSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYV 155
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ YAK G++ +AR +FDKM +V+W ++I G +G +A+ LF M+ GV
Sbjct: 156 QAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGV 215
Query: 240 KPNSVAFVAVLTACSHAGLIDKAW---SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
KP+S FV++L+AC+ G I + Y D + A+ ++ R G +
Sbjct: 216 KPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLG----TALMNMYSRCGNVS 271
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+A E +M +N+ W ++S +H + A ++ ++ PNN+ +LS
Sbjct: 272 KAREVFDSME---EKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLS 328
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/541 (39%), Positives = 325/541 (60%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++ A N ++EAL + QM V KP++FT +SV GK +H
Sbjct: 204 DMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVH 263
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ + ++ +G +L+++Y K ++D+ R F +P KD I W+ +IA Q+
Sbjct: 264 GCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSK 323
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F QM A + P +F+S++ ACA + L+LG Q+H +I+ G ++F++++L+
Sbjct: 324 EAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALM 383
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE------------ 232
D+YAKCG + + +F + + V+W VI+G+ G+ A+ LF
Sbjct: 384 DVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 443
Query: 233 -------------------QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
Q+ VKP+ + FV VL+AC++AGL+D+ +YF SM +D+
Sbjct: 444 TYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDH 503
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P EHY + LLGR G L +A + I + P+ VW LL AC +H ++EL
Sbjct: 504 GIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRIS 563
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+++ ++P + +V+LSN YA A+RW + AS+R M+ KG+KK P SWIE + ++
Sbjct: 564 AQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHS 623
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD SHP IN L+ L + ++ GY+P+ VL DVE+E+K+ LL+ HSERLA+
Sbjct: 624 FTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALS 683
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FGII TP G+ IRI+KNLR+C DCH AIK ISK+VQREI+VRD +RFHHF++G CSCGDY
Sbjct: 684 FGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDY 743
Query: 514 W 514
W
Sbjct: 744 W 744
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 185/365 (50%), Gaps = 18/365 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +S+ T+I G A + + EA+ + ++ + + F +++L + G
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELG 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH + G ++N +G++LI+ Y+ C RV+ + +F + KD +SW ++ +N
Sbjct: 159 WGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAEN 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E LK F QM + KP + +F+S+ AC L +GK +HGC +++ ++ ++++
Sbjct: 219 DCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVG 278
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LLD+Y K G+I AR F+++ D++ W+ +I A + +A+ +F QM + V
Sbjct: 279 VALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVL 338
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN F +VL AC+ ++ + K G+ A+ D+ + G+++ + E
Sbjct: 339 PNQFTFASVLQACATMEGLNLGNQIHCHVIK-IGLHSDVFVSNALMDVYAKCGRMENSME 397
Query: 301 FISNMHAGPTEN--VWLTLLSACRVHKNVELA-GKVAEKIFMIDPNNMGAYVILSN--TY 355
+ P N W T++ +V+L G+ A ++F+ NM Y + + TY
Sbjct: 398 LFAE---SPHRNDVTWNTVIVG-----HVQLGDGEKALRLFL----NMLEYRVQATEVTY 445
Query: 356 AAARR 360
++A R
Sbjct: 446 SSALR 450
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 144/299 (48%), Gaps = 11/299 (3%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQ-MGNVNLKPDSFTLSSVLPIFADYV---DVIKGK 61
+V N ++ +R G ++ + ++ +G+V+ P F + D + + +GK
Sbjct: 1 MVCRNNFLIQFSRRGFSVQSAKLTQEFVGHVS--PSEFNSHAYANALQDCIQKDEPSRGK 58
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H ++ G ++ + L+NMY K + D+ +LF +P ++ IS+ ++I G ++
Sbjct: 59 GLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESV 118
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F E ++ F ++ + F++I+ LG +H CI + G + N F+ +
Sbjct: 119 RFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGT 178
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+D Y+ CG + +AR +FD + D+VSWT ++ A + +A+ LF QM G KP
Sbjct: 179 ALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKP 238
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA--DLLGRAGKLQEA 298
N+ F +V AC D S K + Y VA DL ++G + +A
Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKS---RYELDLYVGVALLDLYTKSGDIDDA 294
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 326/518 (62%), Gaps = 7/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP DLVSWN+++ GL+ G LN R +P+ TL SV+ AD + +
Sbjct: 123 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 182
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +HG ++ G+ + +SLINMY K ++ + +LF +PV+ +SWNS++
Sbjct: 183 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 242
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ---LHGCIIRNGFDDN 176
NG ++G+ F M A I P + +++ AC T LG+Q +H I R GF+ +
Sbjct: 243 NGYAEKGMDLFNLMKRAGINPDQATMVALLRAC---TDTGLGRQAESIHAYIHRCGFNAD 299
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ IA++LL++YAK G + + IF+++ D ++WTA++ G A+H +AI LF+ M K
Sbjct: 300 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 359
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+GV+ + V F +L+ACSH+GL+++ YF M++ Y + P +HY+ + DLLGR+G+L+
Sbjct: 360 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 419
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+AYE I +M P+ VW LL ACRV+ NVEL +VAE++ +DP++ Y++LSN Y+
Sbjct: 420 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 479
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA W+DA+ +R M+ + + + P CS+IE NK + FV GD+ HP I+ L+EL+
Sbjct: 480 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 539
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ + G P T+ VLHD++EE K +++ HSE+LAI FG++ T G + I KNLR+CGD
Sbjct: 540 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 599
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+ KF S + +R II+RD+ RFHHF DG CSC DYW
Sbjct: 600 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 7/277 (2%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH I+ ++ IG L++MY K ED+ RLF +P KD +SWNS+++G G
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143
Query: 123 FDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L F +M + +P V+ S++ ACA + L GK LHG +++ G + +
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL++MY K G + A +F++M + +VSW ++++ + +G A + LF M++ G+ P
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ VA+L AC+ GL +A S ++ G A+ +L + G+L + +
Sbjct: 264 DQATMVALLRACTDTGLGRQAES-IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 322
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
+ W +L+ VH G+ A K+F
Sbjct: 323 FEEI-KDRDRIAWTAMLAGYAVHA----CGREAIKLF 354
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ A + T++ +H +I++ + FI L+ MY K G A+ +FD+M
Sbjct: 67 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 126
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+VSW +++ G + G ++ F +M + G +PN V ++V++AC+ G +D+ S
Sbjct: 127 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 186
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ K G++ + ++ ++ G+ G L A + M
Sbjct: 187 HGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 225
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 326/518 (62%), Gaps = 7/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP DLVSWN+++ GL+ G LN R +P+ TL SV+ AD + +
Sbjct: 180 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +HG ++ G+ + +SLINMY K ++ + +LF +PV+ +SWNS++
Sbjct: 240 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 299
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ---LHGCIIRNGFDDN 176
NG ++G+ F M A I P + +++ AC T LG+Q +H I R GF+ +
Sbjct: 300 NGYAEKGMDLFNLMKRAGINPDQATMVALLRAC---TDTGLGRQAESIHAYIHRCGFNAD 356
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ IA++LL++YAK G + + IF+++ D ++WTA++ G A+H +AI LF+ M K
Sbjct: 357 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 416
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+GV+ + V F +L+ACSH+GL+++ YF M++ Y + P +HY+ + DLLGR+G+L+
Sbjct: 417 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 476
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+AYE I +M P+ VW LL ACRV+ NVEL +VAE++ +DP++ Y++LSN Y+
Sbjct: 477 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 536
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA W+DA+ +R M+ + + + P CS+IE NK + FV GD+ HP I+ L+EL+
Sbjct: 537 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 596
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ + G P T+ VLHD++EE K +++ HSE+LAI FG++ T G + I KNLR+CGD
Sbjct: 597 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 656
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+ KF S + +R II+RD+ RFHHF DG CSC DYW
Sbjct: 657 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 7/277 (2%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH I+ ++ IG L++MY K ED+ RLF +P KD +SWNS+++G G
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200
Query: 123 FDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L F +M + +P V+ S++ ACA + L GK LHG +++ G + +
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL++MY K G + A +F++M + +VSW ++++ + +G A + LF M++ G+ P
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ VA+L AC+ GL +A S ++ G A+ +L + G+L + +
Sbjct: 321 DQATMVALLRACTDTGLGRQAES-IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 379
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
+ W +L+ VH G+ A K+F
Sbjct: 380 FEEI-KDRDRIAWTAMLAGYAVHA----CGREAIKLF 411
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ A + T++ +H +I++ + FI L+ MY K G A+ +FD+M
Sbjct: 124 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 183
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+VSW +++ G + G ++ F +M + G +PN V ++V++AC+ G +D+ S
Sbjct: 184 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 243
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ K G++ + ++ ++ G+ G L A + M
Sbjct: 244 HGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 282
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 321/499 (64%), Gaps = 1/499 (0%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
A+N L +L +++M NL+PD L S A G+ +H +++ G DA+
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
V +GSSL++MYAKC + + ++F +P ++ ++W+ ++ G Q G +E L F++ L
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
+ SFSS++ CA+ T L LG+Q+HG I++ FD + F+ SSL+ +Y+KCG
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +F+++ + ++ W A++ A H + I LF++M+ G+KPN + F+ VL ACSH
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL 315
AGL+D+ YF+ M K+ I P+ +HYA++ D+LGRAG+LQEA E I+NM PTE+VW
Sbjct: 331 AGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
LL++C VHKN ELA A+K+F + P + G ++ LSN YAA R++DAA R +R++G
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE 435
KK SW+E +NK + F AG++ H I E L EL E ME+ GY+ DT VL +V+
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509
Query: 436 EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVR 495
++K + YHSERLAI FG+I P IR++KNLRVCGDCH AIKF+S +R IIVR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569
Query: 496 DNSRFHHFEDGKCSCGDYW 514
DN+RFH FEDGKCSC DYW
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 148/274 (54%), Gaps = 6/274 (2%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
IKG ++HGY ++ GL + ++LIN Y+K DS R F P K + +W+SII+
Sbjct: 31 TIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISC 90
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
QN L L+F ++M+ ++P S +CA L+ +G+ +H ++ G+D +
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ SSL+DMYAKCG I AR +FD+M ++V+W+ ++ G A G +A+ LF++
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+ + N +F +V++ C+++ L++ + ++ S +++ L + G +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 297 EAYEFISNMHAGPTEN--VWLTLLSACRVHKNVE 328
AY+ + + P +N +W +L A H + +
Sbjct: 270 GAYQVFNEV---PVKNLGIWNAMLKAYAQHSHTQ 300
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 127/228 (55%), Gaps = 1/228 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W+ ++ G A+ G EEAL + ++ NL + ++ SSV+ + A+ + G
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG +I+ D++ +GSSL+++Y+KC E ++++F +PVK+ WN+++ Q+
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQH 296
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ ++ F++M ++ +KP ++F +++ AC+H + G+ + + +
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDA 227
+SL+DM + G ++ A + M + S W A++ +H N A
Sbjct: 357 ASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 316/508 (62%), Gaps = 3/508 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N +I G + N + +A+ + RQM + ++ T+ ++P+ A + + G +H
Sbjct: 125 VCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHAC 184
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++R GLD ++ +G+ L+ MY +C V+ + +LF +P K I+WN++I+G QNGL
Sbjct: 185 SVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHV 244
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L +R+M I P V+ ++ +CAHL G+++ I +GF N F+ ++L++M
Sbjct: 245 LDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINM 304
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN+ AR IFD M +++SWTA+I G +HG A+ LF++M P+ AF
Sbjct: 305 YARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAF 364
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V+VL+ACSHAGL +K YF +M +DYG+ P EHY+ V DLLGRAG+L+EA + I +M
Sbjct: 365 VSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMS 424
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL AC++H+NVELA EK+ +P N+G YV+LSN ++ A +
Sbjct: 425 VEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILR 484
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+RV MR + +KK P CS++E + + + F+AGD++HP I L L + +++ G D
Sbjct: 485 VRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSND 544
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
+ + E+ + HSE+LAI FG+I T GT I +IKNLRVCGDCH +K +S+
Sbjct: 545 NDQ---ESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSE 601
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IV R+++VRD +RFHHF++G CSC DYW
Sbjct: 602 IVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 181/380 (47%), Gaps = 12/380 (3%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN + LAR ++EALN+ QM P++FT A + G ++HG+
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCVQNGLFDE 125
I+ G + + +SLI+MY KC+ + + ++F A+ +N++IAG N F +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ FRQM + V+ ++P CA L G LH C +R G D ++ + + LL
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY +CG++ AR +FD M +++W A+I G A +G A + L+ +ME G+ P+ V
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMT-KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V VL++C+H G + +G P ++ A+ ++ R G L +A
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDG 320
Query: 305 MHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMID--PNNMGAYVILSNTYAAARR 360
M +NV W +++ +H ELA ++ +++ D P+ +LS A
Sbjct: 321 M---TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377
Query: 361 WKDAASLRVFMRNKGMKKTP 380
K R+ G++ P
Sbjct: 378 EKGLYYFTAMERDYGLQPGP 397
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L++WN +I G A+NGL L++ R+M + PD TL VL A G
Sbjct: 220 MPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAG 279
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ G N + ++LINMYA+C + + +F + K+ ISW +IIAG +
Sbjct: 280 REVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMH 339
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + ++ F +M+ + P +F S++ AC+H G + R+ G
Sbjct: 340 GQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEH 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S ++D+ + G + AR + M + D W A++ +H N A FE++ +
Sbjct: 400 YSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIE-- 457
Query: 239 VKPNSVAFVAVLT 251
+P ++ + +L+
Sbjct: 458 FEPTNIGYYVLLS 470
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/511 (40%), Positives = 315/511 (61%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S +V WN ++ +NG + E + + + M V + D TL SV+ D GK +
Sbjct: 184 SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWV 243
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
G+ GL N + ++L++MYAKC + + RLF + +D ++W+++I+G Q
Sbjct: 244 AGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQC 303
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L F +M +A+++P V+ S++ ACA L L GK +H + R + ++L
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTAL 363
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+D YAKCG I A F+ M + + +WTA+I G A +G +A+ LF M + G++P
Sbjct: 364 VDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTD 423
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F+ VL ACSH+ L+++ +F+SM +DYGI P EHY + DLLGRAG + EAY+FI
Sbjct: 424 VTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIR 483
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P +W LLS+C VH+NV + + ++I ++P++ G YV+LSN YA+A +WKD
Sbjct: 484 TMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKD 543
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
AA +R M+++G++KTP CS IE+ + F A D HP I + ++E++ R++ GY
Sbjct: 544 AAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGY 603
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP+T +V +VEE +K+ + +HSE+LAI FG++ G TIR+ KNLRVC DCH+A K
Sbjct: 604 VPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKL 663
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ REI+VRD + FHHF+DG CSC DYW
Sbjct: 664 ISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 155/308 (50%), Gaps = 6/308 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+N ++ G E+AL++ +M D T + L + + G+ + Y
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
A++ GL A+ + SSLI+MYA C V + +F + WN+I+A ++NG + E
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ F+ ML + V+ S++ AC + LGK + G + G N + ++L+DM
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG I AR +FD M D+V+W+A+I G +A+ LF +M+ V+PN V
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V+VL+AC+ G ++ + +S + ++ + A+ D + G + +A E +M
Sbjct: 326 VSVLSACAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM- 383
Query: 307 AGPTENVW 314
P +N W
Sbjct: 384 --PVKNSW 389
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+W+ +I G + EAL + +M ++P+ T+ SVL A + G
Sbjct: 282 MQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETG 341
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y R L +G++L++ YAKC ++D+ F +PVK++ +W ++I G N
Sbjct: 342 KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 401
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M A I+P V+F ++ AC+H + G++ + R+ G +
Sbjct: 402 GRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEH 461
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A M + + V W A++ A+H N
Sbjct: 462 YGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRN 506
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 316/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++N++I G G + +L IVR M K D + +VL A D + G ++H
Sbjct: 173 DAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVH 232
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ L+ NV +GS+L++MY KC V D++R F +LP K+ +SW +++ QN L++
Sbjct: 233 AQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYE 292
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ F M + ++P +++ + +CA L L G L C+++ G D++ ++++L+
Sbjct: 293 DALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALM 352
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY+K G+I A +F M L D+VSW +I G A HG A + + F M V P+ V
Sbjct: 353 NMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYV 412
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL+AC+ GL+D+A+ Y N+M K+ GI P EHY + LL R G+L EA FI N
Sbjct: 413 TFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVN 472
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
G W +LL++C+V+KN L +VAE+I ++P+++G YV+LSN YA A RW
Sbjct: 473 NCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGV 532
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R MR + ++K+P SWI V + + F + +K HP +I + L+EL+++++ GYV
Sbjct: 533 VKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYV 592
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ VLHD+++E+K+ L YHSE+LA+ FG+I TP G TI I+KNLR+C DCH AIK I
Sbjct: 593 PNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLI 652
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + R+I+VRD RFH E G CSC DYW
Sbjct: 653 SVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 141/258 (54%), Gaps = 5/258 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS N ++ G A +G ++E+L ++R V+ + + LS+ + A+ G
Sbjct: 71 MPFRNAVSANLLMSGYASSGRHKESLQLLRV---VDFGMNEYVLSAAVSATANVRSYDMG 127
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HGYA++ G + ++++ MY +CA +ED+ ++F + DA ++NS+I G +
Sbjct: 128 RQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDR 187
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D L R M K +VS+ +++ CA + LG Q+H ++ + N+++
Sbjct: 188 GQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVG 247
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY KC ++ A F+ + ++VSWTAV+ + DA+ LF ME +GV+
Sbjct: 248 SALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQ 307
Query: 241 PNSVAFVAVLTACSHAGL 258
PN + L +C AGL
Sbjct: 308 PNEFTYAVALNSC--AGL 323
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW V+ +N LYE+AL + M ++P+ FT + L A + G
Sbjct: 270 LPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTG 329
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ ++ G ++ + ++L+NMY+K +ED+HR+F +P++D +SWN II G +
Sbjct: 330 NALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHH 389
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
GL EG++ F ML A + P +V+F ++ ACA L
Sbjct: 390 GLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQL 424
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D+ KGK +H I +V + ++LI+ YAKC RV + +F +P ++A+S N +++
Sbjct: 26 DLSKGKALHARLIT-AAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G +G E L+ R + S+ + A A++ + +G+Q HG ++ GF +
Sbjct: 85 GYASSGRHKESLQLLR---VVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ +++L MY +C ++ A +F+ + D ++ ++I G G ++ + M
Sbjct: 142 QRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201
Query: 236 KDGVKPNSVAFVAVLTACS 254
+ K + V++VAVL C+
Sbjct: 202 GEAEKWDYVSYVAVLGHCA 220
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 323/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
+P DLVSWN++I G +R L ++ +M + LKP+ T+ V+ A ++
Sbjct: 99 LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK IHG A++ G+ V + +SLIN+Y KC +E + LF + V+ +SWNS++A V
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVH 218
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL ++G+ +F M A I + S++ AC +L L + +HG I+ G D N+ I
Sbjct: 219 MGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAI 278
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++LLD+YAK G + + +F M D V+WTA++ A+HG +AI FE M ++GV
Sbjct: 279 ATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGV 338
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V F +L+ACSH+GL+++ +YF M + YG+ EHY+ + DLLGR+G L +AY
Sbjct: 339 VPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAY 398
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P VW L+ ACRV N+EL +VAE++F +DP++ Y+ LSN Y+AA
Sbjct: 399 KLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAG 458
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+DA+ +R M+ + + + P CS+IE NK + FV GD+SHP +I L+EL+ +
Sbjct: 459 QWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNR 518
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ G+ T+ VLHDV+EE K++L+ HSE+LAI FG++ T G + I KN+R+CGDCH
Sbjct: 519 EVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHG 578
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K IS I +R II+RD RFHHF +G CSCGDYW
Sbjct: 579 FAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL---KFFRQML 134
IG L++ Y + +D+ LF LP KD +SWNS+I+G + D G+ FR
Sbjct: 75 IGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRA--DLGICLGLLFRMRF 132
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+KP V+ ++ ACA + L +GK +HG +++G + + +SL+++Y KCG +
Sbjct: 133 EMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLE 192
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A C+F+ M + +VSW +++ + G A I F M + G+ + V++L AC
Sbjct: 193 AACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACE 252
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVW 314
+ G + K + + G+ + A+ DL + G L ++ + M P W
Sbjct: 253 NLG-VRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAW 310
Query: 315 LTLLSACRVH 324
+LS+ +H
Sbjct: 311 TAMLSSYAMH 320
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 133/312 (42%), Gaps = 31/312 (9%)
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S+++ A + +++ + LH +I++ ++ FI L+ Y + G + A +FD++
Sbjct: 42 SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPD 101
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+VSW ++I G + + + L +M + G+KPN V + V++AC+ G +D
Sbjct: 102 KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKC 161
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
K G+ + ++ +L G+ G L+ A M + W ++++ VH
Sbjct: 162 IHGIAVKS-GMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVS-WNSMVA---VH 216
Query: 325 KNVELAGKVAEKIFMIDPNNMGA------YVILSNTYAAARRWKDA-------------- 364
++ LA K M+ + + ++L+ R+ +A
Sbjct: 217 VHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNL 276
Query: 365 ----ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
A L ++ + + + + A A+ A S+ + R EA+ E E M +
Sbjct: 277 AIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAI-EHFELMVR 335
Query: 421 EGYVPDTKEVLH 432
EG VPD H
Sbjct: 336 EGVVPDHVTFTH 347
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I ++ G EAL + +M + KP+ FT ++VL + G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG ++ D+++ +GSSL++MYAK +++++ +F LP +D +S +IIAG Q
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ F ++ + P +V+++S++ A + L L GKQ H ++R +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ AR +FD M +SW A+++G + HG + + LF M ++ V
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP++V +AVL+ CSH + D + F+ M +YG P EHY + D+LGRAG++ EA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+EFI M + PT V +LL ACRVH +V++ V ++ I+P N G YVILSN YA+A
Sbjct: 413 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D ++R M K + K P SWI+ + + F A D++HP + +KE+ +M
Sbjct: 473 GRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 532
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+Q GYVPD VL+DV+EEQK+ +L HSE+LA+ FG+I T +G IR+ KNLR+C DCH
Sbjct: 533 KQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCH 592
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K SK+ +RE+ +RD +RFH DG CSCGDYW
Sbjct: 593 NFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 159/306 (51%), Gaps = 16/306 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+S L S NG +EAL +M + + ++L D + G
Sbjct: 25 LPISQLCS----------NGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + I+ + + L+ Y KC +ED+ ++ +P K+ +SW ++I+ Q
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F +M+ + KP +F++++ +C + L LGKQ+HG I++ +D ++F+
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSLLDMYAK G I+ AR IF+ + D+VS TA+I G A G +A+ +F ++ +G+
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 241 PNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V + ++LTA S L+D ++ + + ++ ++ ++ D+ + G L A
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAR 309
Query: 300 EFISNM 305
NM
Sbjct: 310 RLFDNM 315
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/511 (40%), Positives = 322/511 (63%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +N++I ++ G +A+ R+M + P ++T +SV+ AD + G +H
Sbjct: 72 DSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVH 131
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G ++ + ++LI YAK + ++F +P + ++WNS+I+G QNGL +
Sbjct: 132 SHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLAN 191
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M ++++P +F S++ AC+ L +L G LH CI+ +G N+ +A+SL+
Sbjct: 192 EAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLV 251
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+M+++CG++ AR +F M ++V WTA+I G +HG +A+ +F +M+ GV PNSV
Sbjct: 252 NMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSV 311
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FVAVL+AC+HAGLID+ S F SM ++YG+ P EH+ + D+ GR G L EAY+F+
Sbjct: 312 TFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKG 371
Query: 305 MHAGP-TENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+++ VW +L AC++HKN +L +VAE + +P N G YV+LSN YA A R
Sbjct: 372 LNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDR 431
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
S+R M +G+KK S I+V N++Y F GDKSHP + I L EL+ R + GY
Sbjct: 432 VESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGY 491
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
P + +H++E E+++ L YHSE+LA+ FG++ T DG T+RI+KNLR+C DCH+AIKF
Sbjct: 492 APVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKF 551
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IS ++ REIIVRD RFHHF +G CSC DYW
Sbjct: 552 ISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H + + G + + + L+ + + + RLF + D+ +NS+I +
Sbjct: 27 QQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKF 86
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F+R+ML+++I P +F+S++ ACA L+ L +G +H + +G+ + F+
Sbjct: 87 GFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQ 146
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAK R+AR +FD+M IV+W ++I G +G A++A+ +F +M + V+
Sbjct: 147 AALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVE 206
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S FV+VL+ACS G +D + + GI + ++ ++ R G + A
Sbjct: 207 PDSATFVSVLSACSQLGSLDFG-CWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARA 265
Query: 301 FISNMHAGPTENVWLTLLSACRVH 324
+M G +W ++S +H
Sbjct: 266 VFYSMIEGNVV-LWTAMISGYGMH 288
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +V+WN++I G +NGL EA+ + +M ++PDS T SVL + + G
Sbjct: 169 MPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + G+ NV + +SL+NM+++C V + +F + + + W ++I+G +
Sbjct: 229 CWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMH 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ F +M + P V+F +++ ACAH + G+ + + + G +
Sbjct: 289 GYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEH 348
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS--WTAVIMGNALHGNAHDAISLFEQMEKD 237
++DM+ + G + A ++ ++V WTA++ +H N + + E + +
Sbjct: 349 HVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENL-IN 407
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
N +V + + AG +D+ S N M +
Sbjct: 408 AEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQ 441
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/537 (40%), Positives = 324/537 (60%), Gaps = 23/537 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV----------------RQMGNVN-----LKP 39
MP ++VSW +I ++ G +ALN+ ++ N N +P
Sbjct: 304 MPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEP 363
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
+ FT ++VL + I G++IH I+ + +V +GSSL++MYAK ++ ++ +F
Sbjct: 364 NEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVF 423
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
LP +D +S +II+G Q GL +E L+ FR++ +K +V+++ ++ A + L L
Sbjct: 424 ECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALD 483
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
LGKQ+H ++R+ + + +SL+DMY+KCGN+ +R IFD M ++SW A+++G +
Sbjct: 484 LGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 543
Query: 220 LHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAP 277
HG + + LF M E+ VKP+SV +AVL+ CSH GL DK + FN M+ + P
Sbjct: 544 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEP 603
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY V DLLGR+G+++EA+EFI M PT +W +LL ACRVH NV++ +++
Sbjct: 604 KMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQL 663
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
I+P N G YVILSN YA+A RW+D +SLR M K + K P S IE+ + F A
Sbjct: 664 LEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHAS 723
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII 457
D+SHP I +KEL ++ GYVPD VLHDV+EEQK+ +L HSE+LA+ FG+I
Sbjct: 724 DRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLI 783
Query: 458 CTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+P IR+IKNLR+C DCH K+ISK+ RE+ +RD +RFH GKCSC DYW
Sbjct: 784 ASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 138/270 (51%), Gaps = 24/270 (8%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ +H + I+ +V + + LI +Y KC + D+H +F +P ++ +SW ++I+
Sbjct: 261 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYS 320
Query: 119 QNGLFDEGLK-FFRQMLIA--------KIK------------PRHVSFSSIMPACAHLTT 157
Q G + L FF + I+ K+K P +F++++ +C
Sbjct: 321 QRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLG 380
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
LG+Q+H II+ ++D++F+ SSLLDMYAK G I AR +F+ + D+VS TA+I G
Sbjct: 381 FILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISG 440
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A G +A+ LF +++ +G+K N V + VLTA S +D N + + P
Sbjct: 441 YAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE--IP 498
Query: 278 SFEHYA-AVADLLGRAGKLQEAYEFISNMH 306
SF ++ D+ + G L + M+
Sbjct: 499 SFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 528
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
QM + + ++++I+ C + G+++H +I+ + ++F+ + L+ +Y KC
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF---EQMEKDGV--------- 239
++ A +FD+M ++VSWTA+I + G A A++LF ++ GV
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 240 ---------KPNSVAFVAVLTACSHA-GLIDKAWSYFNSMTKDYGIAPSFEHY----AAV 285
+PN F VLT+C+ + G I I ++E + +++
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFI------LGRQIHSLIIKLNYEDHVFVGSSL 406
Query: 286 ADLLGRAGKLQEA 298
D+ + GK+ EA
Sbjct: 407 LDMYAKDGKIHEA 419
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 308/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP V W +I G EA+++ R ++PDSFT VL A D+ G
Sbjct: 132 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 191
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A + G+ +V + ++ +++Y KC + + +F + KDA++W +++ G N
Sbjct: 192 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 251
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M +KP + + + AC L L LG+Q + + F DN +
Sbjct: 252 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 311
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+ A +F +M DI+ W A+I+G + G+ A +L QMEK GVK
Sbjct: 312 TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 371
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N F+ +L +C+H GLI YF++MTK Y I+P EHY + DLL RAG LQEA++
Sbjct: 372 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQ 431
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M + LL C++H+N ELA V +++ +++P N G YV+LSN Y+ R
Sbjct: 432 LVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGR 491
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA LR+ M+ KG++K PACSW+E + K + F GDKSHP +I + L EL M+
Sbjct: 492 WEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKT 551
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ V+ DVE+E+K++ L +HSE+LAI F ++ T G TIR+ KNLRVC DCHTA
Sbjct: 552 MGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTA 611
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +S+I REIIVRDN+RFH F DG CSC DYW
Sbjct: 612 IKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 109/201 (54%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H +++ N + +SL+++YAKC + + R+F +P + W ++I +
Sbjct: 90 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 149
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E + R ++P + ++ ACA + L G+ + + G ++F+
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 209
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++ +D+Y KCG + AR +FDKM D V+W A++ G A +G+ +A+ LF M+ +G+
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 269
Query: 240 KPNSVAFVAVLTACSHAGLID 260
KP+ A L+AC+ G +D
Sbjct: 270 KPDCYAVAGALSACTRLGALD 290
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 140 PRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P H++ + + + L L G+QLH ++ N + +SLL +YAKCG + A+
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD+M V WTA+I G+ +A+ + +G++P+S V VLTAC+
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + + ++ G+A S A DL + G++ +A E M
Sbjct: 188 LATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 318/514 (61%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWNT+I GL G + EA + M SFT + ++ A + G
Sbjct: 36 MPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIG 95
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H ++ G+ ++ + +LI+MY+KC +ED+ +F +P K + WN+IIAG +
Sbjct: 96 RQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALH 155
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + +M + +K H +FS I+ CA L ++ KQ H +IR+GF ++
Sbjct: 156 GYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVAN 215
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D Y+K G I AR +FDKM +++SW A+I G HG +A+ LFEQM ++ +
Sbjct: 216 TALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMN 275
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+AVL+ACSH+GL ++ W F SM +D I P HYA + +L+GR G L EA
Sbjct: 276 PNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALA 335
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I PT N+W LL+ACRV++N EL AEK++ ++P+ + Y++L N Y +A
Sbjct: 336 LIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGN 395
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
K+AA + ++ KG++ P CSWIEVK + + F++GD HP I + + +L+ + +
Sbjct: 396 LKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISK 455
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+ K +L DV+E++++ L YHSE+LAI FG+I TP ++I++ R+CGDCH A
Sbjct: 456 YGYVPNQKTLLPDVDEQEERVRL-YHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEA 514
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK I+++ REI++RD RFHHF+ G CSC DYW
Sbjct: 515 IKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 151/289 (52%), Gaps = 8/289 (2%)
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
I +G + + + + ++ M+ KC + D+ RLF +P ++ +SWN+II+G V G F E
Sbjct: 2 IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAF 61
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ F M +F+ ++ A A L + +G+QLH C ++ G D++F++ +L+DMY
Sbjct: 62 RLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMY 121
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
+KCG+I AR +F++M V W +I G ALHG + +A+ ++ +M GVK + F
Sbjct: 122 SKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFS 181
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
++ C+ ++ A ++ + +G A+ D + G++++A M
Sbjct: 182 MIVRICARLASVEHAKQAHAALIR-HGFGSDIVANTALVDFYSKWGRIEDARHVFDKM-- 238
Query: 308 GPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
++NV W L+ H A ++ E++ ++PN++ +LS
Sbjct: 239 -ASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLS 286
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 168 IIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
+I NGF+ + ++ + +L M+ KCG + AR +FD+M ++VSW +I G G+ +A
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 228 ISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
LF M ++ S F ++ A + LI ++ T GI A+ D
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIG-RQLHACTLKMGIGDDIFVSCALID 119
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ + G +++A F+ T W T+++ +H E A
Sbjct: 120 MYSKCGSIEDA-RFVFEEMPEKTTVGWNTIIAGYALHGYSEEA 161
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/548 (40%), Positives = 337/548 (61%), Gaps = 35/548 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWN +I A +GL E+L M +++ + +S TLSS+L + + ++ G
Sbjct: 537 MNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG 596
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IHG ++ GLD+NVCI ++L+ +Y++ R ED+ +F + +D ISWNS++A VQ+
Sbjct: 597 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 656
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSI-------------------------------- 148
G +GLK ++L KP V+++++
Sbjct: 657 GKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITM 715
Query: 149 --MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+ A A+L L G+QLHG +I+ GF+ ++ + ++ +DMY KCG + + +
Sbjct: 716 VSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINR 775
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
+SW +I A HG A F +M K G KP+ V FV++L+AC+H GL+D+ +Y+
Sbjct: 776 SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 835
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKN 326
+SMT+++G+ P EH + DLLGR+G+L A FI M P + W +LL+ACR+H N
Sbjct: 836 DSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGN 895
Query: 327 VELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIE 386
+ELA K AE + +DP++ AYV+ SN A + +W+D +LR M + +KK PACSW++
Sbjct: 896 LELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVK 955
Query: 387 VKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYH 446
+K+K ++F G+K HP RI+ L EL++ ++ GYVPDT LHD++EEQK+ L+ H
Sbjct: 956 LKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNH 1015
Query: 447 SERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
SERLA+ FG+I TP+ +T+RI KNLRVCGDCH+ KF+S IV R+I++RD RFHHF G
Sbjct: 1016 SERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGG 1075
Query: 507 KCSCGDYW 514
KCSCGDYW
Sbjct: 1076 KCSCGDYW 1083
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 135/244 (55%), Gaps = 11/244 (4%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFADYVDVIKGK 61
SW+T++ G R GLYEEA+ + QM + ++P+ F ++S++ AD +G
Sbjct: 341 SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD-----EGF 395
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++HG+ ++ G+ +V +G++L++ Y V ++ +LF +P + +SW S++ G +G
Sbjct: 396 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 455
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E L +++M + +F+++ +C L LG Q+ G II+ GF+D++ +A+
Sbjct: 456 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 515
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ M++ ++ A +FD M+ DI+SW A+I A HG +++ F M +
Sbjct: 516 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 575
Query: 242 NSVA 245
NS
Sbjct: 576 NSTT 579
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 81/334 (24%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN +I G A G +++ + R M L PD +TL SVL A+ +I
Sbjct: 153 MMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIA 212
Query: 61 KEIHG---------YAIRHGLDANV----------------------------------- 76
+IHG Y I GL N
Sbjct: 213 NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 272
Query: 77 ---CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII------------------- 114
+G++LI+MYAK +ED+ R F + K+ ISW S+I
Sbjct: 273 GIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFD 332
Query: 115 --------------AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-H 159
+G V+ GL++E + F QM ++P +S++ AC+ +
Sbjct: 333 EMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD 392
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
G Q+HG +++ G ++++ ++L+ Y G + A+ +F++M H++VSWT++++G +
Sbjct: 393 EGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 452
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
GN + ++++++M ++GV N F V ++C
Sbjct: 453 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 486
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 136/250 (54%), Gaps = 1/250 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++VG + +G E LN+ ++M + + T ++V D + G
Sbjct: 436 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 495
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ G+ I++G + +V + +SLI+M++ + VE++ +F + D ISWN++I+ +
Sbjct: 496 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 555
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F M + + SS++ C+ + L G+ +HG +++ G D N+ I
Sbjct: 556 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 615
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL +Y++ G A +F M D++SW +++ G D + + ++ + G K
Sbjct: 616 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-K 674
Query: 241 PNSVAFVAVL 250
P+ V + A++
Sbjct: 675 PDRVTWNALI 684
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 155/401 (38%), Gaps = 126/401 (31%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSW ++ G ++NG +E+A +F+D
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAF----------------------VLFSD------- 121
Query: 61 KEIHGYAIRH-GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+RH G+ AN +L++ ++KC ++ED+ LF + +D +SWN++I G
Sbjct: 122 -------MRHCGVKAN----HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAV 170
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD---- 175
G D+ FR ML + P + S++ A A L + Q+HG I + G+
Sbjct: 171 QGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 230
Query: 176 ---------------------------NMF----------------IASSLLDMYAKCGN 192
++F + ++L+DMYAK G
Sbjct: 231 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGE 290
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH--------------------------- 225
I A+ FD+M+ +++SWT++I G A HG H
Sbjct: 291 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYV 350
Query: 226 ------DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
+A+ LF QM GV+PN +++TACS +G + + GI
Sbjct: 351 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 410
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
A+ G G + A + M P NV W +L+
Sbjct: 411 YVGTALVHFYGSIGLVYNAQKLFEEM---PDHNVVSWTSLM 448
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 39/199 (19%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G IH + I +G +++ + + LI Y K V + +F +P + +SW ++++G
Sbjct: 48 QGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYS 107
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG F++ F M +K H
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANH------------------------------------ 131
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+L+D ++KCG + A +F M D+VSW A+I G A+ G A D+ +F M + G
Sbjct: 132 ---ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 188
Query: 239 VKPNSVAFVAVLTACSHAG 257
+ P+ +VL A + G
Sbjct: 189 LVPDCYTLGSVLRASAEGG 207
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 122/311 (39%), Gaps = 40/311 (12%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ I+ C G +H +I NGF ++ + + L+ Y K G++ AR +FD M
Sbjct: 33 YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH--------A 256
+VSWTA++ G + +G A LF M GVK N A V + C
Sbjct: 93 ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH-ALVDFHSKCGKMEDASYLFG 151
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
++++ +N+M Y + + + + R G + + Y S + A
Sbjct: 152 TMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGG---G 208
Query: 317 LLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGM 376
L+ A ++H + G + I +L N YA + A LR KGM
Sbjct: 209 LIIANQIHGIITQLGYGSYDIVT---------GLLINAYAKNGSLRSAKDLR-----KGM 254
Query: 377 KKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEE 436
K S + A + G Y N L++ + G + D K ++EE
Sbjct: 255 LKKDLFS-------STALITGYAHEGIYTMGN----ALIDMYAKSGEIEDAKRAFDEMEE 303
Query: 437 EQKKNLLYYHS 447
KN++ + S
Sbjct: 304 ---KNVISWTS 311
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 324/541 (59%), Gaps = 35/541 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W +I G A G + E++ + M + P SFT +++L + +DV G+++H I
Sbjct: 107 WTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTI 166
Query: 69 R-HGLDANVCIGSSLINMYAKCARVEDSHR------------------------------ 97
G +++ +G++LI+MY KC + HR
Sbjct: 167 LIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAAS 226
Query: 98 -LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
LF LP+KD ++W +++ G QN E L+ F +M A +K V+ ++ ACA L
Sbjct: 227 ELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLG 286
Query: 157 TLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ ++GF N+ + S+L+DMYAKCG++ A +F++M+ ++ S++++
Sbjct: 287 AAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSM 346
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I+G A+HG A A+ LF++M K +KPN V F+ VLTACSHAG++++ F M + +G
Sbjct: 347 IVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHG 406
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
+APS +HYA + DLLGRAG+L+EA + M P VW LL ACR+H N ++A A
Sbjct: 407 VAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAA 466
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK-AYA 393
+F ++PN +G Y++LSN YA+A RW D + +R MR KG+KK P CSW+E K +
Sbjct: 467 SHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHE 526
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F AGD SHP I +AL++LL+R++ GY P+ V +D+ +E+KK LL HSE+LA+
Sbjct: 527 FFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALA 586
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG++ T G TIRI+KNLR+C DCH+ + S+I REI+VRDN RFHHF DG+CSCG++
Sbjct: 587 FGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNF 646
Query: 514 W 514
W
Sbjct: 647 W 647
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 9/247 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+V+W ++ G A+N EAL + +M +K D TL V+ A
Sbjct: 232 LPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYA 291
Query: 61 KEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ A + G +NV +GS+LI+MYAKC VED++++F + ++ S++S+I G
Sbjct: 292 NWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFA 351
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNM 177
+GL ++ F +ML +IKP V+F ++ AC+H + G+QL + +G +
Sbjct: 352 MHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSE 411
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGN---AHDAISLFE 232
+ ++D+ + G + A + M + H V W A++ +HGN A A S
Sbjct: 412 DHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGV-WGALLGACRIHGNPDMAQIAASHLF 470
Query: 233 QMEKDGV 239
++E +G+
Sbjct: 471 ELEPNGI 477
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR--LFCLLPVKDAISWNSIIAGCV 118
K++H + R GL+ + + L+ K D + +F + + W ++I G
Sbjct: 56 KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYA 115
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNM 177
G F E + + M I P +F++++ AC+ ++LG+Q+H I+ GF ++
Sbjct: 116 LQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDL 175
Query: 178 FIASSLLDMYAKC-------------------------------GNIRLARCIFDKMDLH 206
++ ++L+DMY KC GN+ A +FD + +
Sbjct: 176 YVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMK 235
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
D+V+WTA++ G A + +A+ +FE+M+ GVK + V V V++AC+ G A ++
Sbjct: 236 DMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYA-NWV 294
Query: 267 NSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEFISNMH 306
+ + G P+ +A+ D+ + G +++AY+ M
Sbjct: 295 RDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERME 336
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL---ARCIFDKM 203
S++ C H+ + KQ+H I R G + F+ + LL K ++ + R +F ++
Sbjct: 44 SVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKL-DVPMDPYPRLVFQQV 99
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ + WTA+I G AL G +++ L+ M + G+ P S F A+L ACS A ++
Sbjct: 100 EYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGR 159
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
G + D+ + G L + M + W +L+ A
Sbjct: 160 QVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVIS-WTSLIVAYAK 218
Query: 324 HKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMK 377
N+E A ++ + + M D M A+ + YA R ++A + M+ G+K
Sbjct: 219 VGNMEAASELFDGLPMKD---MVAWTAMVTGYAQNARPREALEVFERMQAAGVK 269
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 321/515 (62%), Gaps = 8/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWNT++ GL+++G EEA + M N S + ++++ FA D+
Sbjct: 106 MPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRN----SVSWNAMVSGFACSGDMSTA 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E A + + +++++ Y V + + F +PV++ +SWN+++AG V+N
Sbjct: 162 EEWFRNAPE---KEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKN 218
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
D+ L+ FR M+ A ++P + SS++ C++L+ L GKQ+H ++ N+ +
Sbjct: 219 SHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTV 278
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MY KCG++ A +F +M D+V+W A+I G A HG+ +AI+LFE+M+ +GV
Sbjct: 279 GTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGV 338
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + FV VLTAC H GL D F M + YGI P +HY+ + DLL RAGKL+ A
Sbjct: 339 EPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAV 398
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI +M P + + TLL+ACRV+KN+E A A K+ DP + GAYV L+N YA A
Sbjct: 399 DFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVAN 458
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W D + +R +M++ + KTP SWIE+K + F + D+ HP + I+E L +L ERM+
Sbjct: 459 QWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMK 518
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPD VLHDV+E K +L HSE+LAI FG+I T G T+RI KNLRVCGDCH
Sbjct: 519 EMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHN 578
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS I REII+RD +RFHHF G CSC DYW
Sbjct: 579 AAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 127/271 (46%), Gaps = 28/271 (10%)
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ + RLF +PV+D SWN++++G ++G +E F M + VS+++++
Sbjct: 97 DGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRN----SVSWNAMVSGF 152
Query: 153 AHLTTLHLGKQLHGCIIRNGFD-DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
A + ++ RN + ++ + ++++ Y GN+ A F+ M + ++VSW
Sbjct: 153 ACSGDMSTAEEW----FRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSW 208
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLID-----KAWSY 265
AV+ G + +A DA+ LF M ++ V+PN+ +VL CS+ + W
Sbjct: 209 NAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCM 268
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRV 323
++++ + S + + + G L A MH T +V W ++S
Sbjct: 269 KLLLSRNLTVGTS------LVSMYCKCGDLSSACILFGEMH---TRDVVAWNAMISGYAQ 319
Query: 324 HKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
H + + A + E++ ++PN + V+L+
Sbjct: 320 HGDGKEAINLFERMKDEGVEPNWITFVVVLT 350
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 323/514 (62%), Gaps = 8/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D SWNT+I G A+N ++A ++ M N+ T ++++ + + D+
Sbjct: 64 MPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNV----VTWNAMISGYVECGDLDSA 119
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ A +V +++I Y K R+ + RLF +P K+ ++WN++IAG ++N
Sbjct: 120 LKLFEKAPFK----SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIEN 175
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++G+K FR M+ I+P + SS + C+ L+ L LG+Q+H + ++ D+
Sbjct: 176 HRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAG 235
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KCG + +F ++ D+V+W A+I G A HG A+ LF++M + G+K
Sbjct: 236 TSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMK 295
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + FVAVL AC+HAG D YF+SM KDYG+ +HY + DLLGRAGKL EA +
Sbjct: 296 PDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVD 355
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P V+ TLL ACR+HKN E+A ++K+ +DP + YV L+N YAA +R
Sbjct: 356 LIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKR 415
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +R M++ + KTP SWIEVK+ A+ F +GDK HP I+ LKEL ++M+
Sbjct: 416 WDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKL 475
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD + LHDV EEQK+ LL +HSE+LAI +G+I P GT IR+ KNLRVCGDCH A
Sbjct: 476 AGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRA 535
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK+IS+I +REIIVRD +RFHHF+DG CSC DYW
Sbjct: 536 IKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++++ Y + + +E + F +P+KD SWN++I G QN D+ F M +
Sbjct: 42 NTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNV- 100
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA----SSLLDMYAKCGNIRL 195
V++++++ L +L F+ F + ++++ Y K G I L
Sbjct: 101 ---VTWNAMISGYVECGDLDSALKL--------FEKAPFKSVVAWTAMITGYMKLGRIGL 149
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F+KM ++V+W A+I G + A D + LF M G++PNS + L CS
Sbjct: 150 AERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCS 208
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+ +K ++WNS++AG + LK +++ + +P VS+++++
Sbjct: 1 MTLKTTVTWNSVLAGMSKK---RGKLKEAQELFVKIPEPDAVSYNTML------------ 45
Query: 162 KQLHGCIIRN-------GFDDNMFIA-----SSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
C +RN F ++M I ++++ +A+ + AR +F M ++V
Sbjct: 46 ----SCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVV 101
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+W A+I G G+ A+ LFE+ V VA+ A++T G I A F M
Sbjct: 102 TWNAMISGYVECGDLDSALKLFEKAPFKSV----VAWTAMITGYMKLGRIGLAERLFEKM 157
Query: 270 TK 271
+
Sbjct: 158 PE 159
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/508 (40%), Positives = 316/508 (62%), Gaps = 1/508 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G A++ +L+ QM L PDSFT+ S+L + + GKE+HG+
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR+ L+ ++ + S++++Y C + LF + K +SWN++I G +QNG D L
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FRQM++ I+ +S + AC+ L +L LG++ H +++ +D+ FIA SL+DMY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AK G+I + +F+ + SW A+IMG +HG A +AI LFE+M++ G P+ + F+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS-NMH 306
VLTAC+H+GLI + Y + M +G+ P+ +HYA V D+LGRAG+L +A ++ M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
+W +LLS+CR+H+N+E+ KVA K+F ++P YV+LSN YA +W+D
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M ++K CSWIE+ K ++FV G++ + I L ++ + GY PD
Sbjct: 823 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPD 882
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HD+ EE+K L HSE+LA+ +G+I T +GTTIR+ KNLR+C DCH A K ISK
Sbjct: 883 TMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISK 942
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+++REI+VRDN RFHHF++G CSCGDYW
Sbjct: 943 VMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN VI +RN LY+E L + + +L PD FT V+ A DV G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG ++ GL +V +G++L++ Y V D+ +LF ++P ++ +SWNS+I NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 124 DEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E +M+ P + +++P CA + LGK +HG ++ D + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG- 238
++L+DMY+KCG I A+ IF + ++VSW ++ G + G+ H + QM G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 239 -VKPNSVAFVAVLTACSHAGLI 259
VK + V + + C H +
Sbjct: 390 DVKADEVTILNAVPVCFHESFL 411
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 142/260 (54%), Gaps = 6/260 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP +LVSWN++I + NG EE+ ++ +M G+ PD TL +VLP+ A +
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ GK +HG+A++ LD + + ++L++MY+KC + ++ +F + K+ +SWN+++ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 117 CVQNGLFDEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G RQML +K V+ + +P C H + L K+LH ++ F
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
N +A++ + YAKCG++ A+ +F + + SW A+I G+A + ++ QM
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 235 EKDGVKPNSVAFVAVLTACS 254
+ G+ P+S ++L+ACS
Sbjct: 488 KISGLLPDSFTVCSLLSACS 507
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M LVSWNTVI G +NG + AL + RQM ++ ++ V + + G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E H YA++H L+ + I SLI+MYAK + S ++F L K SWN++I G +
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
GL E +K F +M P ++F ++ AC H +H G + L G N+
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKM-DLHDIVSWTAVIMGNALHGN 223
+ ++DM + G + A R + ++M + D+ W +++ +H N
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 782
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 112/207 (54%), Gaps = 10/207 (4%)
Query: 56 DVIKGKEIHGY---AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D+ G++IH + R D +C + +I MYA C +DS +F L K+ WN+
Sbjct: 99 DIEMGRKIHQLVSGSTRLRNDDVLC--TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 156
Query: 113 IIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I+ +N L+DE L+ F +M+ + P H ++ ++ ACA ++ + +G +HG +++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +++F+ ++L+ Y G + A +FD M ++VSW ++I + +G + ++ L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 232 -EQMEKDG---VKPNSVAFVAVLTACS 254
E ME++G P+ V VL C+
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCA 303
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/519 (41%), Positives = 322/519 (62%), Gaps = 7/519 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-YE-EALNIVRQM---GNVNLKPDSFTLSSVLPIFADYV 55
M +++SW ++ G R G YE EA+ + M G V P+ FT S VL A
Sbjct: 323 MREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGV--APNCFTFSGVLKACASLP 380
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D G+++HG I+ GL A C+G+ L+++YAK R+E + + F +L K+ +S +
Sbjct: 381 DFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDD 440
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
V++ + R++ +++S++ A + T+ G+Q+H +++ GF
Sbjct: 441 TNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRT 500
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ + ++L+ MY+KCGN A +F+ M+ ++++WT++I G A HG A A+ LF M
Sbjct: 501 DLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNML 560
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ GVKPN V ++AVL+ACSH GLID+AW +F SM ++GI P EHYA + DLLGR+G L
Sbjct: 561 ETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLL 620
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EA EFI++M VW T L +CRVH+N +L A+ I +P++ Y++LSN Y
Sbjct: 621 SEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLY 680
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A RW+D A++R M+ K + K SWIEV+N+ + F GD HP +I E L EL
Sbjct: 681 ATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELA 740
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+++ GYVP+T VLHDVE+EQK+ L+ HSE+LA+ F +I TP+ IR+ KNLRVCG
Sbjct: 741 LKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCG 800
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCHTAIK+IS + REI+VRD +RFHH +DG CSC DYW
Sbjct: 801 DCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 183/379 (48%), Gaps = 15/379 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M ++V+W +I LA+ G +EA+++ +M + PD FTL+ ++ + A+ +
Sbjct: 221 MREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSL 280
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKE+H + IR GL ++C+G SL++MYAKC V+++ ++F + + +SW +++ G V+
Sbjct: 281 GKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVR 340
Query: 120 --NGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
G E ++ F ML+ + P +FS ++ ACA L G+Q+HG I+ G
Sbjct: 341 GGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAI 400
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + L+ +YAK G + AR FD + ++VS T V N N + L ++E
Sbjct: 401 DCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEY 460
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G +S + ++L+ + G I K ++M G A+ + + G +
Sbjct: 461 VGSGVSSFTYASLLSGAACIGTIGKG-EQIHAMVVKIGFRTDLSVNNALISMYSKCGNKE 519
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYVILS 352
A + ++M W ++++ H K +EL + E + PN++ +LS
Sbjct: 520 AALQVFNDMEDCNVI-TWTSIINGFAKHGFASKALELFYNMLET--GVKPNDVTYIAVLS 576
Query: 353 NTYAAA---RRWKDAASLR 368
WK S+R
Sbjct: 577 ACSHVGLIDEAWKHFTSMR 595
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 142/259 (54%), Gaps = 9/259 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+VS++++I A N +A+ + Q+ + P+ + ++V+ G +
Sbjct: 119 DVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCL 178
Query: 64 HGYAIRHG-LDANVCIGSSLINMYAK---CARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ ++ G D++VC+G LI+M+ K A +E + ++F + K+ ++W +I Q
Sbjct: 179 FGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQ 238
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G DE + F +ML++ P + + ++ CA + L LGK+LH +IR+G ++
Sbjct: 239 YGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLC 298
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH--DAISLFEQM-E 235
+ SL+DMYAKCG ++ AR +FD M H+++SWTA++ G G + +A+ +F M
Sbjct: 299 VGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLL 358
Query: 236 KDGVKPNSVAFVAVLTACS 254
+ GV PN F VL AC+
Sbjct: 359 QGGVAPNCFTFSGVLKACA 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 36/306 (11%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL--PVKDAISWNSIIAGC 117
GK +H L + + +SLI +Y+K + +F + +D +S++SII+
Sbjct: 71 GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130
Query: 118 VQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDD 175
N + ++ F Q+L+ + P F++++ AC G L G +++ G FD
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDS 190
Query: 176 NMFIASSLLDMYAK---CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF- 231
++ + L+DM+ K ++ AR +FDKM ++V+WT +I A +G +AI LF
Sbjct: 191 HVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFL 250
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLID-----KAWSYFNSMTKDYGIAPSFEHYAAVA 286
E + G P+ +++ C+ + +W + + D + S +
Sbjct: 251 EMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCS------LV 304
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLS------------ACRVHKNVELAGK 332
D+ + G +QEA + M NV W L++ A R+ N+ L G
Sbjct: 305 DMYAKCGLVQEARKVFDGMRE---HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGG 361
Query: 333 VAEKIF 338
VA F
Sbjct: 362 VAPNCF 367
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
++ S ++ C HLGK LH + + + + +SL+ +Y+K + A IF
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112
Query: 203 MD--LHDIVSWTAVIMGNALHGNAHDAISLFEQ-MEKDGVKPNSVAFVAVLTACSHAGLI 259
M+ D+VS++++I A + N A+ +F+Q + +DGV PN F AV+ AC G
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172
Query: 260 DKAWSYFNSMTK 271
F + K
Sbjct: 173 KTGLCLFGFVLK 184
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 289/441 (65%)
Query: 74 ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
+N + ++L+NMY +C +E++ ++F + DA SW ++I C +N E L+ F +M
Sbjct: 9 SNAILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRM 68
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ I P V+ +S++ ACA L +GKQ+H + +GF ++ ++LLDMYAKCG++
Sbjct: 69 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 128
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+ +F M+ + VSWTA+I A HG +A+ LF++M +G+ ++ F+ VL AC
Sbjct: 129 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 188
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
SHAGLI ++ +F+SM +DY IAP+ HY D +GRAG+LQ+A E I +M P
Sbjct: 189 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVT 248
Query: 314 WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRN 373
W TLL+ACR+H E A KVAE + + P + AY +L N YAA R+ D +R M +
Sbjct: 249 WKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSMTD 308
Query: 374 KGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHD 433
+G+KK P S+IEVKNK + FVAGD++HP I L++L RM + GYVP+TK+VLH
Sbjct: 309 RGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHA 368
Query: 434 VEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREII 493
V EE+K+ L+ HSE+LAI FG+I TP GT + I+KNLRVC DCH A K I+KI++R I+
Sbjct: 369 VNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIV 428
Query: 494 VRDNSRFHHFEDGKCSCGDYW 514
VRD RFHHFEDG+CSC DYW
Sbjct: 429 VRDTHRFHHFEDGQCSCKDYW 449
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 2/234 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D SW +I N EAL + +M + P S TL+SVL A + GK+IH
Sbjct: 41 DAFSWTNMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIH 100
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++V ++L++MYAKC +E S ++F + ++++SW ++IA Q+G D
Sbjct: 101 SRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGD 160
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ-LHGCIIRNGFDDNMFIASSL 183
E L+ F++M + + +F ++ AC+H + + H +
Sbjct: 161 EALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRA 220
Query: 184 LDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
LD + G ++ A + M H + V+W ++ +H A A + E + K
Sbjct: 221 LDTIGRAGRLQDAEELIHSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAK 274
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 305/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLVSWN ++ G + I QM KP+ FT SVL + +D G
Sbjct: 213 MTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFG 272
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + I++ D + +G++L++MYAK +ED+ F L +D SW II+G Q
Sbjct: 273 KQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQT 332
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ +K+FRQM IKP + +S + C+H+ TL G+QLH ++ G ++F+
Sbjct: 333 DQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVG 392
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+D+Y KCG + A IF + DIVSW +I G + HG A+ F M +G+
Sbjct: 393 SALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIM 452
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ VL+ACS GL+++ F+SM+K YGI PS EHYA + D+LGRAGK E
Sbjct: 453 PDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKI 512
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M+ P +W T+L AC++H NV+ K A+K+F ++P +Y++LSN +A+ R
Sbjct: 513 FIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGR 572
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D ++R M ++G+KK P CSW+EV + + F++ D SHP I L +L + +
Sbjct: 573 WDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMS 632
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP T+ VLH+V ++K LYYHSERLA+ F ++ T IRI KNLR+C DCH
Sbjct: 633 IGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDF 692
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K IS I +EI+VRD RFHHF+ G CSC D W
Sbjct: 693 MKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 135/254 (53%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSWN ++ G A+ G ++ L + +M K FTLS+VL A+ + +G
Sbjct: 11 MPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREG 70
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H A+R G + + +G SL++MY+KC V D+ ++F + D ++W+++I G Q
Sbjct: 71 KVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQ 130
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F M +P + SS++ ++ L G+ +HGCI + GF+ + ++
Sbjct: 131 GHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVS 190
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY K + +F+ M D+VSW A++ G +F QM +G K
Sbjct: 191 NPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFK 250
Query: 241 PNSVAFVAVLTACS 254
PN F++VL +CS
Sbjct: 251 PNMFTFISVLRSCS 264
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 95/166 (57%)
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
+E + RLF +P K+ +SWN+++ G Q G + LK F +M + K + S+++
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA+ +L GK LH +R+G + + F+ SL+DMY+KCG + A +F K+ D+V+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+A+I G G+ +A LF M + G +PN ++++ ++ G
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 326/551 (59%), Gaps = 42/551 (7%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ W +I A L+ AL+ QM ++P++FTLSS+L + +
Sbjct: 82 PNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLH----PAR 137
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP------------------ 103
+H +AI+ GL +++ + + L++ YA+ V + +LF +P
Sbjct: 138 AVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHG 197
Query: 104 -------------VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-------KIKPRHV 143
+KD + WN +I G Q+G +E L FFR+M++ K++P +
Sbjct: 198 MLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEI 257
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ +++ +C + L GK +H + NG N+ + ++L+DMY KCG++ AR +FD M
Sbjct: 258 TVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVM 317
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ D+V+W ++IMG +HG + +A+ LF +M GVKP+ + FVAVLTAC+HAGL+ K W
Sbjct: 318 EGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGW 377
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
F+SM YG+ P EHY + +LLGRAG++QEAY+ + +M P +W TLL ACR+
Sbjct: 378 EVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRI 437
Query: 324 HKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACS 383
H NV L ++AE + + G YV+LSN YAAAR W A +R M+ G++K P CS
Sbjct: 438 HSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCS 497
Query: 384 WIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLL 443
IEVKN+ + FVAGD+ HP I L+++ +++ Y P T VLHD+ E++K+ L
Sbjct: 498 SIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSL 557
Query: 444 YYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF 503
HSE+LA+ FG+I T G I+I+KNLRVC DCH +K +SKI R+II+RD +RFHHF
Sbjct: 558 EVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHF 617
Query: 504 EDGKCSCGDYW 514
E+G CSC DYW
Sbjct: 618 ENGSCSCRDYW 628
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 129/245 (52%), Gaps = 13/245 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQ-------MGNVNLKPDSFTLSSVLPIFAD 53
M + D+V WN +I G A++G EAL R+ GN ++P+ T+ +VL
Sbjct: 209 MGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQ 268
Query: 54 YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
+ GK +H Y +G+ NV +G++L++MY KC +ED+ ++F ++ KD ++WNS+
Sbjct: 269 VGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSM 328
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-G 172
I G +G DE L+ F +M +KP ++F +++ ACAH + G ++ + G
Sbjct: 329 IMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYG 388
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLF 231
+ + ++++ + G ++ A + M++ D V W ++ +H N +SL
Sbjct: 389 MEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSN----VSLG 444
Query: 232 EQMEK 236
E++ +
Sbjct: 445 EEIAE 449
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 44/301 (14%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH +R GL + + L YA + S LF P + W II
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
LF L ++ QML I+P + SS++ AC TLH + +H I+ G ++++++
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVST 156
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK----- 236
L+D YA+ G++ A+ +FD M +VS+TA++ A HG +A LFE M
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVC 216
Query: 237 -----DG----------------------------VKPNSVAFVAVLTACSHAGLIDKAW 263
DG V+PN + VAVL++C G ++
Sbjct: 217 WNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG- 275
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
+ +S ++ GI + A+ D+ + G L++A + M G W +++ +
Sbjct: 276 KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVM-EGKDVVAWNSMIMGYGI 334
Query: 324 H 324
H
Sbjct: 335 H 335
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+T HL Q+H ++R G + + L YA G++ + +F + ++ WT +I
Sbjct: 35 STHHL-LQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHII 93
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+A H A+S + QM ++PN+ ++L AC+ + A + + K +G+
Sbjct: 94 NAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIK-FGL 148
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + D R G + A + M
Sbjct: 149 SSHLYVSTGLVDAYARGGDVASAQKLFDAM 178
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/519 (41%), Positives = 316/519 (60%), Gaps = 30/519 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN++I G +NG +EAL + +QM +KPD F+LSS+L D KG
Sbjct: 339 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 398
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS--WNSIIAGCV 118
+E+H + +R+ ++ + L++MYAKC ++ + +++ KD + WNSI+AG
Sbjct: 399 RELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYA 458
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
GL E F +ML + I+ ++ +I+ + +
Sbjct: 459 NKGLKKESFNHFLEMLESDIEYDVLTMVTIV-------------------------NLLV 493
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+DMY+KCG I AR +FD M+ +IVSW A+I G + HG + +A+ L+E+M K G
Sbjct: 494 LETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKG 553
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ PN V F+A+L+ACSH GL+++ F SM +DY I EHY + DLLGRAG+L++A
Sbjct: 554 MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDA 613
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
EF+ M P + W LL ACRVHK++++ A+++F +DP N G YVI+SN YAAA
Sbjct: 614 KEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAA 673
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RWK+ +R M+ KG+KK P SWIE+ ++ F AG K+HP I L+ L +
Sbjct: 674 GRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQS 733
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYY---HSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+ GY+PDT +L +V++ +++ Y HSERLA+ G+I P +TIR+ KNLR+CG
Sbjct: 734 KGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICG 793
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCHTA KFISKI R II RD +RFHHFE+GKCSCGDYW
Sbjct: 794 DCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 148/255 (58%), Gaps = 2/255 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L +WNT+I+ AR Y EA I +M + + PD+FT +S L + G
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 194
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H I G + +G++LI+MYAKC E ++F + ++ ++WNSII+ Q
Sbjct: 195 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQF 254
Query: 121 GLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G F++ L F +M ++ I+P +F++++ CA+ + G+Q+H +IR N+
Sbjct: 255 GHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 314
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+ MY++CG + A+ IF++M + SW ++I G +G +A+ LF+QM+ +G
Sbjct: 315 VETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 374
Query: 239 VKPNSVAFVAVLTAC 253
+KP+ + ++L++C
Sbjct: 375 IKPDCFSLSSMLSSC 389
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 125/231 (54%), Gaps = 9/231 (3%)
Query: 34 NVNLKPDS----FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC 89
+++ KP S SS++ D +GK IH I +G + + + + ++ +YA+
Sbjct: 60 SIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS 119
Query: 90 ARVED---SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
++D + +LF +P ++ +WN++I + + E F +ML + P + +F+
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFA 179
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S + C L + GKQ+H +I GF + F+ ++L+DMYAKC + +FD+M
Sbjct: 180 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 239
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQME--KDGVKPNSVAFVAVLTACSH 255
+ V+W ++I A G+ +DA+ LF +M+ +DG++P+ F +LT C++
Sbjct: 240 NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCAN 290
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 308/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP V W +I G EA+++ R ++PDSFT VL A D+ G
Sbjct: 587 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 646
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A + G+ +V + ++ +++Y KC + + +F + KDA++W +++ G N
Sbjct: 647 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 706
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M +KP + + + AC L L LG+Q + + F DN +
Sbjct: 707 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 766
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+ A +F +M DI+ W A+I+G + G+ A +L QMEK GVK
Sbjct: 767 TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 826
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N F+ +L +C+H GLI YF++MTK Y I+P EHY + DLL RAG LQEA++
Sbjct: 827 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQ 886
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M + LL C++H+N ELA V +++ +++P N G YV+LSN Y+ R
Sbjct: 887 LVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGR 946
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA LR+ M+ KG++K PACSW+E + K + F GDKSHP +I + L EL M+
Sbjct: 947 WEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKT 1006
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ V+ DVE+E+K++ L +HSE+LAI F ++ T G TIR+ KNLRVC DCHTA
Sbjct: 1007 MGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTA 1066
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +S+I REIIVRDN+RFH F DG CSC DYW
Sbjct: 1067 IKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 109/201 (54%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H +++ N + +SL+++YAKC + + R+F +P + W ++I +
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E + R ++P + ++ ACA + L G+ + + G ++F+
Sbjct: 605 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++ +D+Y KCG + AR +FDKM D V+W A++ G A +G+ +A+ LF M+ +G+
Sbjct: 665 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 724
Query: 240 KPNSVAFVAVLTACSHAGLID 260
KP+ A L+AC+ G +D
Sbjct: 725 KPDCYAVAGALSACTRLGALD 745
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 140 PRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P H++ + + + L L G+QLH ++ N + +SLL +YAKCG + A+
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD+M V WTA+I G+ +A+ + +G++P+S V VLTAC+
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + + ++ G+A S A DL + G++ +A E M
Sbjct: 643 LATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 688
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/508 (40%), Positives = 316/508 (62%), Gaps = 1/508 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G A++ +L+ QM L PDSFT+ S+L + + GKE+HG+
Sbjct: 213 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 272
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR+ L+ ++ + S++++Y C + LF + K +SWN++I G +QNG D L
Sbjct: 273 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 332
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FRQM++ I+ +S + AC+ L +L LG++ H +++ +D+ FIA SL+DMY
Sbjct: 333 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 392
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AK G+I + +F+ + SW A+IMG +HG A +AI LFE+M++ G P+ + F+
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS-NMH 306
VLTAC+H+GLI + Y + M +G+ P+ +HYA V D+LGRAG+L +A ++ M
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 512
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
+W +LLS+CR+H+N+E+ KVA K+F ++P YV+LSN YA +W+D
Sbjct: 513 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 572
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M ++K CSWIE+ K ++FV G++ + I L ++ + GY PD
Sbjct: 573 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPD 632
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HD+ EE+K L HSE+LA+ +G+I T +GTTIR+ KNLR+C DCH A K ISK
Sbjct: 633 TMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISK 692
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+++REI+VRDN RFHHF++G CSCGDYW
Sbjct: 693 VMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 139/256 (54%), Gaps = 6/256 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ VSWN++I + NG EE+ ++ +M G+ PD TL +VLP+ A ++ G
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG+A++ LD + + ++L++MY+KC + ++ +F + K+ +SWN+++ G
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121
Query: 121 GLFDEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G RQML +K V+ + +P C H + L K+LH ++ F N
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A++ + YAKCG++ A+ +F + + SW A+I G+A + ++ QM+ G
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 241
Query: 239 VKPNSVAFVAVLTACS 254
+ P+S ++L+ACS
Sbjct: 242 LLPDSFTVCSLLSACS 257
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 10/259 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M LVSWNTVI G +NG + AL + RQM ++ ++ V + + G
Sbjct: 307 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 366
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E H YA++H L+ + I SLI+MYAK + S ++F L K SWN++I G +
Sbjct: 367 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 426
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
GL E +K F +M P ++F ++ AC H +H G + L G N+
Sbjct: 427 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 486
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKM-DLHDIVSWTAVIMGNALHGNAHD----AISLFEQ 233
+ ++DM + G + A R + ++M + D+ W +++ +H N A LFE
Sbjct: 487 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE- 545
Query: 234 MEKDGVKPNSVAFVAVLTA 252
+E + KP + ++ L A
Sbjct: 546 LEPE--KPENYVLLSNLYA 562
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHL 160
++ +SWNS+I NG +E +M+ P + +++P CA + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
GK +HG ++ D + + ++L+DMY+KCG I A+ IF + ++VSW ++ G +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 221 HGNAHDAISLFEQMEKDG--VKPNSVAFVAVLTACSHAGLI 259
G+ H + QM G VK + V + + C H +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 161
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 314/516 (60%), Gaps = 3/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+V W +I + +AL + R+M D T SV D
Sbjct: 193 MLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA 252
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HGYA+ +G +V +G+S++ MYAKC VE + +F + ++ ISWNS+++G QN
Sbjct: 253 ISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQN 312
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L F QM ++ P V+ ++ AC++L + HLG++LH +I + D + +
Sbjct: 313 GRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR 372
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++++DMY KCG++ A +F+ +L D+ SW +I G +HG+ +A+ LF +M+ +G
Sbjct: 373 NAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEG 432
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+PN + F ++L+ACSHAGLID+ F MTK + P +HYA + D+LGRAG L EA
Sbjct: 433 VEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEA 491
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ I + + P++ VW LL ACR+H N EL A +F ++P + G YV++SN YAA+
Sbjct: 492 FRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAAS 551
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+WK+ +R M+++G+KK A S IE + + F D+S P+Y + ++ L M
Sbjct: 552 NKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEM 611
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD VLHDVE E K++LL YHSE+LA+ FGI+ G I++ KNLRVC DCH
Sbjct: 612 KMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCH 671
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS I R+IIVRD +RFHHF+ G+CSCGDYW
Sbjct: 672 WAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 181/353 (51%), Gaps = 18/353 (5%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT++ A G EA+++ M + + ++FT VL + A + + G+ +HG +R
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G +++ + ++L++MYAKC + D+H +F + ++D + W ++I Q + L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
FR+M ++ S+ A L + +HG + NGF ++ + +S++ MYAK
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CGN+ AR +FD+M+ + +SW +++ G +G DA+SLF QM+ PN V + +
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340
Query: 250 LTACSHAG---LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
++ACS+ G L K ++ S D I + + A+ D+ + G L A E +N
Sbjct: 341 VSACSYLGSKHLGRKLHNFVISSKMD--IDTTLRN--AIMDMYMKCGDLDTAVEMFNNCE 396
Query: 307 AGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFM------IDPNNMGAYVILS 352
G + + W L+S VH + GK A ++F ++PN++ ILS
Sbjct: 397 LGERDVSSWNVLISGYGVHGH----GKEALELFSRMQVEGVEPNDITFTSILS 445
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCI 199
H + ++ C LTTL L +H + GF F+A L+ +Y+K G++ AR +
Sbjct: 25 HHFYDHLLQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLAR-LIILYSKLGDLHSARTL 80
Query: 200 FDKMDLHDIVSWTA--------VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
FD H A ++ A G +++AI L+ M++ GV N+ + VL
Sbjct: 81 FDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLK 140
Query: 252 AC-SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
C S G + + + +G E AA+ D+ + G++ +A+E M
Sbjct: 141 VCASELGAVFGEVVHGQVVRTGFGSDLFVE--AALVDMYAKCGEIGDAHEVFDRM 193
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 328/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQ-MGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +LVSWN++IVG N LY+ A+ + + + + P+ ++SSVL A+ +
Sbjct: 306 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 365
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++HG +++GL + +SL++MY KC ++ +LF + +D ++WN ++ G VQ
Sbjct: 366 GRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ 425
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N F+E +F M I P SFS+++ + A L LH G +H II+ G+ NM I
Sbjct: 426 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 485
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SL+ MYAKCG++ A +F+ ++ H+++SWTA+I LHG A+ I LFE M +G+
Sbjct: 486 LGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGI 545
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V FV VL+ACSH G +++ ++FNSM K + + P EHYA + DLLGRAG L EA
Sbjct: 546 EPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAK 605
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI +M PT +VW LL ACR + N+++ + AE++F ++P N G YV+L+N +
Sbjct: 606 RFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSG 665
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R ++A +R M G++K P CSWI+VKN + F A D+SH I + L++L + ++
Sbjct: 666 RLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVK 725
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GYV +T+ V + +EE +++ L+YHSE+LA+ FG++ P + IRI KNLR CG CHT
Sbjct: 726 KKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHT 785
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SKI REIIVRD +RFH F DG CSCGDYW
Sbjct: 786 VMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 201/384 (52%), Gaps = 17/384 (4%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+W ++I L+ ++ +AL++ QM P+ FT SS+L A + V+ G+++H
Sbjct: 210 IVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHS 269
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+HG DAN+ +G++L++MYAKCA + + R+F +P ++ +SWNS+I G N L+D
Sbjct: 270 LIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDR 329
Query: 126 GLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F+ +L K + P VS SS++ ACA++ L+ G+Q+HG +++ G ++ +SL+
Sbjct: 330 AVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLM 389
Query: 185 DMYAKC----GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
DMY KC ++L +C+ D+ D+V+W ++MG + +A + F M ++G+
Sbjct: 390 DMYFKCRFFDEGVKLFQCVGDR----DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ +F VL + + + + + + + K G + ++ + + G L +AY+
Sbjct: 446 PDEASFSTVLHSSASLAALHQGTAIHDQIIK-LGYVKNMCILGSLITMYAKCGSLVDAYQ 504
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYA 356
+ NV W ++SA ++H ++ E + I+P+++ +LS
Sbjct: 505 VFEGIE---DHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 561
Query: 357 AARRWKDAASLRVFMRNKGMKKTP 380
R + A + M P
Sbjct: 562 TGRVEEGLAHFNSMKKIHDMNPGP 585
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 122/220 (55%), Gaps = 6/220 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQ 119
+IH I + + + ++LIN+YAKC + + LF + K ++W S+I
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSH 222
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + L F QM + P +FSSI+ A A + G+QLH I ++GFD N+F+
Sbjct: 223 FNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQ-MEKD 237
++L+DMYAKC ++ A +FD+M ++VSW ++I+G H N +D A+ +F+ + +
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVG-FFHNNLYDRAVGVFKDVLREK 341
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
V PN V+ +VL+AC++ G ++ + K YG+ P
Sbjct: 342 TVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK-YGLVP 380
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAV 214
+L Q+H II N + F+ ++L+++YAKCG + A +F H IV+WT++
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216
Query: 215 IMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
I + H N H A+SLF QM G PN F ++L+A S A ++ +S+ +
Sbjct: 217 IT-HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSA-SAATMMVLHGQQLHSLIHKH 274
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
G + A+ D+ + + A M P N+
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQM---PERNL 311
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 323/514 (62%), Gaps = 6/514 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
+P D+VSWN +I G G Y+EAL + ++M + N++PD T+ +V+ A +
Sbjct: 181 IPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIEL 240
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +H + HG +N+ I ++LI++Y+K VE + LF L KD ISWN++I G
Sbjct: 241 GRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTH 300
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI---IRNGFDDN 176
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I ++ +
Sbjct: 301 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNV 360
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ +SL+DMYAKCG+I A+ +FD M + +W A+I G A+HG A+ A +F +M
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR 420
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+G++P+ + FV +L+ACSH+G++D + F SMT+ Y I P EHY + DLLG +G
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
+EA E I+ M P +W +LL AC++H N+EL A+K+ I+P N G+YV+LSN Y
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIY 540
Query: 356 AAARRWKDAASLRVFMRNKGM-KKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
AAA RW + A +R + +KGM KK P CS IE+ + + F+ GDK HP I L+E+
Sbjct: 541 AAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEM 600
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
+E+ G+VPDT EVL ++EEE ++ L +HSE+LAI FG+I T GT + I+KNLRVC
Sbjct: 601 EVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVC 660
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+CH A K ISKI +REII RD +RF HF DG C
Sbjct: 661 KNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 198/385 (51%), Gaps = 38/385 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L PDS+T +L A +G++IH
Sbjct: 53 NLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIH 112
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVED--------SHR------------------- 97
G+ ++ G D ++ + +SLI+MYA+ R+ED SHR
Sbjct: 113 GHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIE 172
Query: 98 ----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ-MLIAKIKPRHVSFSSIMPAC 152
LF +P KD +SWN++I+G V+ G + E L+ F++ M++ ++P + +++ AC
Sbjct: 173 SAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSAC 232
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A ++ LG+ +H I +GF N+ I ++L+D+Y+K G + A +FD + D++SW
Sbjct: 233 AQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWN 292
Query: 213 AVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMT 270
+I G H N + +A+ LF++M + G PN V +++L AC+H G ID W +
Sbjct: 293 TLI-GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINK 351
Query: 271 KDYGIAPSFEHY-AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K G+ + ++ D+ + G + A + + + + + W ++S +H
Sbjct: 352 KLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANA 411
Query: 330 AGKVAEKIFM--IDPNNMGAYVILS 352
A + ++ M I+P+++ +LS
Sbjct: 412 AFDIFSRMRMNGIEPDDITFVGLLS 436
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 318/515 (61%), Gaps = 29/515 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D++ W+ +I A++ +EA+ + QM + P+ FT +SVL A + G
Sbjct: 301 IPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
+IH + I+ GL ++V + ++L+++YAKC R+E+S LF P + D WN++I G VQ
Sbjct: 361 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQ 420
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G ++ L+ F ML +++ V++SS + ACA L L G Q+H ++ FD ++ +
Sbjct: 421 LGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVV 480
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG+I+ AR +FD M+ D VSW A+I G ++HG
Sbjct: 481 TNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG----------------- 523
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
AC++AGL+D+ +YF SM +D+GI P EHY + LLGR G L +A
Sbjct: 524 -----------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAV 572
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I + P+ VW LL AC +H ++EL A+ + ++P + +V+LSN YA A+
Sbjct: 573 KLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAK 632
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + AS+R M+ KG+KK P SWIE + ++F GD SHP IN L+ L + +
Sbjct: 633 RWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTK 692
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+P+ VL DVE+E+K+ LL+ HSERLA+ FGII TP G+ IRI+KNLR+C DCH
Sbjct: 693 KAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHA 752
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISK+VQREI+VRD +RFHHF++G CSCGDYW
Sbjct: 753 AIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 167/321 (52%), Gaps = 3/321 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++ A N ++EAL + QM V KP++FT +SV GK +H
Sbjct: 204 DMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVH 263
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A++ + ++ +G +L+++Y K ++D+ F +P KD I W+ +IA Q+
Sbjct: 264 GCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSK 323
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F QM A + P +F+S++ ACA + L+LG Q+H +I+ G ++F++++L+
Sbjct: 324 EAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALM 383
Query: 185 DMYAKCGNIRLARCIF-DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
D+YAKCG + + +F + +D+ W VI+G+ G+ A+ LF M + V+
Sbjct: 384 DVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 443
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V + + L AC+ ++ +S+T A+ D+ + G +++A +
Sbjct: 444 VTYSSALRACASLAALEPGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVF 501
Query: 304 NMHAGPTENVWLTLLSACRVH 324
++ E W ++S +H
Sbjct: 502 DLMNKQDEVSWNAMISGYSMH 522
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 139/254 (54%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +S+ T+I G A + + EA+ + ++ + + F +++L + G
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELG 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH + G ++N +G++LI+ Y+ C RV+ + +F + KD +SW ++ +N
Sbjct: 159 WGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAEN 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E LK F QM + KP + +F+S+ AC L +GK +HGC +++ ++ ++++
Sbjct: 219 DCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVG 278
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LLD+Y K G+I AR F+++ D++ W+ +I A + +A+ +F QM + V
Sbjct: 279 VALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVL 338
Query: 241 PNSVAFVAVLTACS 254
PN F +VL AC+
Sbjct: 339 PNQFTFASVLQACA 352
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 143/295 (48%), Gaps = 11/295 (3%)
Query: 10 NTVIVGLARNGLYEEALNIVRQ-MGNVNLKPDSFTLSSVLPIFADYV---DVIKGKEIHG 65
N ++ +R G ++ + ++ +G+V+ P F + D + + +GK +H
Sbjct: 5 NNFLIRFSRRGFSVQSAKLTQEFVGHVS--PSEFNSHAYANALQDCIQKDEPSRGKGLHC 62
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
++ G ++ + L+NMY K + D+ +LF +P ++ IS+ ++I G ++ F E
Sbjct: 63 EILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F ++ + F++I+ + LG +H CI + G + N F+ ++L+D
Sbjct: 123 AIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALID 182
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
Y+ CG + +AR +FD + D+VSWT ++ A + +A+ LF QM G KPN+
Sbjct: 183 AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA--DLLGRAGKLQEA 298
F +V AC D S K + Y VA DL ++G + +A
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKS---RYELDLYVGVALLDLYTKSGDIDDA 294
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 324/534 (60%), Gaps = 24/534 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN ++ G +G EE LNI+++M KP+S +++SVL ++ + GKE H
Sbjct: 875 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 934
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY +R+G D +V +G+SLI+MY K + + +F + ++ +WNS+++G G+F+
Sbjct: 935 GYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 994
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSI--------------MP----------ACAHLTTLHL 160
+ L+ QM IKP V+++ + MP ACA L+ L
Sbjct: 995 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQK 1054
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
GK++H IRNGF +++F+A++L+DMY+K +++ A +F ++ + SW +IMG A+
Sbjct: 1055 GKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAI 1114
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
G +AIS+F +M+K GV P+++ F A+L+AC ++GLI + W YF+SM DY I P E
Sbjct: 1115 FGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLE 1174
Query: 281 HYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI 340
HY + DLLGRAG L EA++ I M P +W LL +CR+HKN+ A A+ +F +
Sbjct: 1175 HYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKL 1234
Query: 341 DPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS 400
+PNN Y+++ N Y+ RW+D LR M G++ SWI++ + + F + +K
Sbjct: 1235 EPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKP 1294
Query: 401 HPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTP 460
HP +I L +L+ M++ GYVPD V +++E +K+ +L H+E+LAI +G+I
Sbjct: 1295 HPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMK 1354
Query: 461 DGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
G IR+IKN R+C DCH+A K+IS + RE+ +RD RFHHF +GKCSC D+W
Sbjct: 1355 AGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 155/298 (52%), Gaps = 35/298 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + + WN I+ ++ ++ + + R+M LK ++ T+ VL +
Sbjct: 735 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAA 794
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG---- 116
K+IHGY R GLD++V + + LI+MY+K ++E + R+F + ++ SWNS+I+
Sbjct: 795 KQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAAL 854
Query: 117 --------------------------CVQNGLF-----DEGLKFFRQMLIAKIKPRHVSF 145
C+ +G F +E L ++M KP S
Sbjct: 855 GFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSM 914
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S++ A + L L++GK+ HG ++RNGFD ++++ +SL+DMY K ++ A+ +FD M
Sbjct: 915 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKN 974
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+I +W +++ G + G DA+ L QMEK+G+KP+ V + +++ + G KA+
Sbjct: 975 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 7 VSWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+ WN+ + + G L + +++ + DS S L +D+ G EIHG
Sbjct: 639 LKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHG 698
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
I+ G D +V + +L+N Y +C +E ++++F +P +A+ WN I +Q+ +
Sbjct: 699 CLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQK 758
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
G++ FR+M + +K + ++ AC + L+ KQ+HG + R G D ++ + + L+
Sbjct: 759 GVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLIS 818
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY+K G + LAR +FD M+ + SW ++I A G +DA SLF ++E +KP+ V
Sbjct: 819 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 878
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ +L+ G ++ + M + G P+ +V + G L E
Sbjct: 879 WNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKE 932
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/542 (39%), Positives = 319/542 (58%), Gaps = 28/542 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW+ +I +G +AL++ R M + + PD TL+S+L + ++ +
Sbjct: 320 MEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQV 379
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A HG+ N+ + + L++ Y+ ++D++ LF + V+D++SW+ ++ G +
Sbjct: 380 RQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 439
Query: 121 GLF----------------------------DEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
G + +E L F +M + P V+ +++ AC
Sbjct: 440 GDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 499
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A L +H + + I R F ++ + ++++DM+AKCG + AR IFD+M+ +++SW+
Sbjct: 500 AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWS 559
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I HG A+ LF M + G+ PN + V++L ACSHAGL+++ +F+ M +D
Sbjct: 560 AMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED 619
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
Y + +HY V DLLGRAG+L EA + I +M E +W L ACR HK+V LA K
Sbjct: 620 YSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEK 679
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
A + + P N G Y++LSN YA A RW+D A R M + +KK P +WIEV NK++
Sbjct: 680 AATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSH 739
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F GD +HP I E LK L ++E GYVPDT VLHDV+EE K +LY HSE+LAI
Sbjct: 740 QFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAI 799
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
FG+I TP+ T IRIIKNLRVCGDCHT K +S I R IIVRD +RFHHF++G CSCGD
Sbjct: 800 AFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGD 859
Query: 513 YW 514
YW
Sbjct: 860 YW 861
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 21/253 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D VSW+ ++ G A+ G Y R++ +PD++TL V+ D +
Sbjct: 139 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN---- 194
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +L++MY KC +ED+ LF + +D ++W +I G +
Sbjct: 195 -----------------LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L F +M + P V+ +++ ACA L +H + + I R F ++ +
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++DMYAKCG + AR IFD+M+ +++SW+A+I HG A+ LF M G+
Sbjct: 298 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 357
Query: 241 PNSVAFVAVLTAC 253
P+ + ++L AC
Sbjct: 358 PDKITLASLLYAC 370
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 42/358 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV+W +I G A G E+L + +M + PD + +V+ A + K
Sbjct: 219 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 278
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y R +V +G+++I+MYAKC VE + +F + K+ ISW+++IA +
Sbjct: 279 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 338
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L FR ML + + P ++ +S++ AC + L +Q+H +G N+ +A
Sbjct: 339 GQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVA 398
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA--------------------- 219
+ L+ Y+ + A +FD M + D VSW+ ++ G A
Sbjct: 399 NKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 458
Query: 220 -------LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
GNA++++ LF++M ++GV P+ VA V V+ AC+ G + KA + D
Sbjct: 459 PDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKART-----IDD 513
Query: 273 YGIAPSFE----HYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
Y F+ A+ D+ + G ++ A E M +NV W +++A H
Sbjct: 514 YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME---EKNVISWSAMIAAYGYH 568
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 35/270 (12%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A HG+ N+ + + LI Y+ ++D++ LF + V+D++SW+ ++ G +
Sbjct: 98 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + FR+++ +P + + ++ AC L L +
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM-------------------- 197
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+L+DMY KC I AR +FDKM D+V+WT +I G A G A++++ LFE+M ++GV
Sbjct: 198 -ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE----HYAAVADLLGRAGKLQ 296
P+ VA V V+ AC+ G + KA + DY F+ A+ D+ + G ++
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKA-----RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVE 311
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVH 324
A E M +NV W +++A H
Sbjct: 312 SAREIFDRME---EKNVISWSAMIAAYGYH 338
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/520 (42%), Positives = 326/520 (62%), Gaps = 8/520 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D VSWN++IV ++ +AL + ++M K D FTL+SVL +I G++
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISWNSIIAGCVQ 119
HG I+ G N +GS LI+ Y+KC + DS ++F + D + WN++I+G
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 120 NG-LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-M 177
N L +E +K FRQM +P SF + AC++L++ KQ+HG I++ N +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+ +Y K GN++ AR +FD+M + VS+ +I G A HG+ +A+ L+++M
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ PN + FVAVL+AC+H G +D+ YFN+M + + I P EHY+ + DLLGRAGKL+E
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A FI M P W LL ACR HKN+ LA + A ++ ++ P YV+L+N YA
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYAD 561
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
AR+W++ AS+R MR K ++K P CSWIEVK K + FVA D SHP +NE L+E++++
Sbjct: 562 ARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKK 621
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNL---LYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
M++ GYV D K + +E + + L +HSE+LA+ FG++ T DG + ++KNLR+C
Sbjct: 622 MKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRIC 681
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GDCH AIKF+S + REIIVRDN RFH F+DGKCSCGDYW
Sbjct: 682 GDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARV----------------------- 92
D+ GK +H ++ + ++ + + +N+Y+KC R+
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 93 ---EDS-----HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+DS +LF +P D +S+N++I+G + F++M + +
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
S ++ AC + L KQLH + GFD + ++ + Y+K G +R A +F MD
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 205 -LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
L D VSW ++I+ H A++L+++M G K + +VL A +
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ N+F + ++ YAK I +AR +FD++ D VS+ +I G A A+ LF++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL---- 289
M K G + + ++ AC + K F+ ++ F+ Y++V +
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFS-------VSGGFDSYSSVNNAFVTYY 183
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+ G L+EA M E W +++ A HK
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N +I G A++G EAL + ++M + + P+ T +VL A V +G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+E + ++ S +I++ + ++E++ R +P K +++W +++ C
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 316/511 (61%), Gaps = 5/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +I G +NG A+ + +M + P+ FT S++L I +IH
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS----ILPPQIH 423
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ +G++L+ Y+K ED+ +F ++ KD ++W+++++ Q G +
Sbjct: 424 AQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSL 183
F +M I IKP + SS++ ACA + + G+Q H I+ + D + ++S+L
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSAL 543
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY++ GNI A+ +F++ D+VSW ++I G A HG + AI F QME G++ +
Sbjct: 544 VSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDG 603
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F+AV+ C+H GL+ + YF+SM +D+ I P+ EHYA + DL RAGKL E I
Sbjct: 604 VTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIR 663
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M VW TLL ACRVHKNVEL A+K+ ++P++ YV+LSN YAAA +WK+
Sbjct: 664 DMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKE 723
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R M + +KK CSWI++KNK ++F+A DKSHP +I + LK ++ R++Q+GY
Sbjct: 724 RDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGY 783
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
P+T VLHD+ E+QK+ +L HSERLA+ FG+I TP GT ++I+KNLRVCGDCH +K
Sbjct: 784 SPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKM 843
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S I REII+RD SRFHHF G CSCGD+W
Sbjct: 844 VSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 158/297 (53%), Gaps = 10/297 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W +++ G A ++ E + + +M + P+ FT +SVL A + G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +++ G ++V + +SL+NMYAKC VED+ +F + +D +SWN+++AG N
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ F + K ++++++ CA+L L L +QLH C++++GF +
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM 340
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L D Y+KCG + A IF ++VSWTA+I G +G+ A+ LF +M +D V
Sbjct: 341 TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRV 400
Query: 240 KPNSVAFVAVLTACS-------HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
PN + A+L A HA +I + + S+ + S+ + + D L
Sbjct: 401 MPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGT--ALLASYSKFGSTEDAL 455
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 158/325 (48%), Gaps = 2/325 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V N V+ AR G+ E L+ + DS TLS VL D + G+++H
Sbjct: 65 VGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCL 124
Query: 67 AIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
++ G D V G+SL++MY KC V + +F +P K+ ++W S++ GC + E
Sbjct: 125 CVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSE 184
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F +M I P +F+S++ A A L LG+++H ++ G ++F+ +SL++
Sbjct: 185 VMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMN 244
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG + A+ +F+ M+ D+VSW ++ G L+ +A+ LF + K
Sbjct: 245 MYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQST 304
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ V+ C++ + A + + K +G + A+AD + G+L +A S
Sbjct: 305 YATVIKLCANLKQLALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 306 HAGPTENVWLTLLSACRVHKNVELA 330
W ++S C + ++ LA
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLA 388
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/518 (40%), Positives = 321/518 (61%), Gaps = 7/518 (1%)
Query: 2 PVSDLVSWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P D +NT+I ++ + R M + P+ FT VL A + G
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVED----SHRLFCLLPVKDAISWNSIIAG 116
K +HG ++ G + +V + ++LI+MY C ED + ++F P D ++W+++IAG
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMY--CCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAG 202
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
V+ G + FR+M + + P ++ S++ ACA L L LGK + + + +
Sbjct: 203 FVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKS 262
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + ++L+DM+AKCGN+ A +F +MD IVSWT+VI G A+HG DA+SLF++M +
Sbjct: 263 VELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVE 322
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G+ P+ VAF+ VL+ACSH+GL+DK YF SM +++ I P EHY + DLL R G ++
Sbjct: 323 NGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVK 382
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA+EF+ M P + +W T+++AC ++L +++++ +P + YV+LSN YA
Sbjct: 383 EAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYA 442
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
R+W+ +R M +GMKK P + IEV N+ Y FVAGDKSH Y I E + E+
Sbjct: 443 KLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGR 502
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+++ GYVP T +VL D++EE K++ LY HSE+LAI F ++ TP GT+IRI+KNLRVC D
Sbjct: 503 EIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCED 562
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A KFISK+ REI+VRD +RFHHF++G CSC D+W
Sbjct: 563 CHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 14/302 (4%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVI-KGKEIHGYAIRHGLDANVCIGSSLINM-------- 85
+N T ++L + + + + K +IH + ++ GL N I + +
Sbjct: 8 INTPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIH 67
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN-GLFDEGLKFFRQMLIAKIKPRHVS 144
YA SH P DA +N++I Q F+R ML + P +
Sbjct: 68 YATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFT 127
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN--IRLARCIFDK 202
F ++ CA + +L LGK +HGC+++ GF++++ + ++L+ MY G A +FD
Sbjct: 128 FPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDD 187
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
D V+W+A+I G G + A+ LF +M+ GV P+ + V+VL+AC+ G ++
Sbjct: 188 SPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELG 247
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
+ S + I S E A+ D+ + G + +A + M + T W ++++
Sbjct: 248 -KWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSR-TIVSWTSVIAGLA 305
Query: 323 VH 324
+H
Sbjct: 306 MH 307
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 308/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP V W +I G EA+++ R ++PDSFT VL A D+ G
Sbjct: 611 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 670
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A + G+ +V + ++ +++Y KC + + +F + KDA++W +++ G N
Sbjct: 671 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 730
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M +KP + + + AC L L LG+Q + + F DN +
Sbjct: 731 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 790
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG+ A +F +M DI+ W A+I+G + G+ A +L QMEK GVK
Sbjct: 791 TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 850
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N F+ +L +C+H GLI YF++MTK Y I+P EHY + DLL RAG LQEA++
Sbjct: 851 LNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQ 910
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M + LL C++H+N ELA V +++ +++P N G YV+LSN Y+ R
Sbjct: 911 LVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGR 970
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+DAA LR+ M+ KG++K PACSW+E + K + F GDKSHP +I + L EL M+
Sbjct: 971 WEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKT 1030
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ V+ DVE+E+K++ L +HSE+LAI F ++ T G TIR+ KNLRVC DCHTA
Sbjct: 1031 MGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTA 1090
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK +S+I REIIVRDN+RFH F DG CSC DYW
Sbjct: 1091 IKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 109/201 (54%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H +++ N + +SL+++YAKC + + R+F +P + W ++I +
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 628
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E + R ++P + ++ ACA + L G+ + + G ++F+
Sbjct: 629 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A++ +D+Y KCG + AR +FDKM D V+W A++ G A +G+ +A+ LF M+ +G+
Sbjct: 689 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 748
Query: 240 KPNSVAFVAVLTACSHAGLID 260
KP+ A L+AC+ G +D
Sbjct: 749 KPDCYAVAGALSACTRLGALD 769
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 140 PRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P H++ + + + L L G+QLH ++ N + +SLL +YAKCG + A+
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD+M V WTA+I G+ +A+ + +G++P+S V VLTAC+
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + + ++ G+A S A DL + G++ +A E M
Sbjct: 667 LATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 712
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 330/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V +N++ G +R+ E N+ ++ +L PD++T S+L A + +G
Sbjct: 91 MSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEG 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++ G+D NV + +LINMY +C V+ + +F + + +N++I G +
Sbjct: 151 RQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARR 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FR+M +KP ++ S++ +CA L +L LGK +H ++GF + +
Sbjct: 211 NRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVN 270
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DM+AKCG++ A IF+ M D +W+A+I+ A HG A +++ +FE+M + V+
Sbjct: 271 TALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQ 330
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH GL+++ YF+ M ++GI PS +HY ++ DLLGRAG L++AYE
Sbjct: 331 PDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYE 390
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W LL+AC H N+ELA KV+E+I +D ++ G YVILSN YA ++
Sbjct: 391 FIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKK 450
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ SLR M+++ K P CS IEV N + F +GD +++ AL E+++ ++
Sbjct: 451 WEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 510
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT V+H D+ +++K+ L YHSE+LAI FG++ TP GTTIR++KNLRVC DCH+
Sbjct: 511 AGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHS 570
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS I R++++RD RFHHFEDGKCSC D+W
Sbjct: 571 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 326/551 (59%), Gaps = 37/551 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN +I +NG + EAL + +++ K T S+L + + +G
Sbjct: 268 MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG 327
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISW---------- 110
+ +H + + GLD+ V + ++L+NMYAKC +E++ ++F + +DA++W
Sbjct: 328 RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASN 387
Query: 111 ------------------------NSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSF 145
N++I VQNG +K FR+M A +KP V+F
Sbjct: 388 GYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTF 447
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+++ ACA L L K LH I + + N+ + ++L++MYA+CG++ A +F
Sbjct: 448 IAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKE 507
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+VSWTA++ + +G +A+ LF++M+ +GVKP+ V + ++L C+H G +++ W Y
Sbjct: 508 KTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRY 567
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F M + +G+AP+ +H+AA+ DLLGR+G+L +A E + +M P W+T L+ACR+H
Sbjct: 568 FTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHG 627
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
+EL AE+++ +DP++ Y+ +SN YAA W+ AS+R M +G+KK P S+I
Sbjct: 628 KLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFI 687
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
EV K + F +G K HP I E L L M GYVPDTK VLHDV E +K+ +L Y
Sbjct: 688 EVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLY 747
Query: 446 HSERLAIVFGIICT-PDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF- 503
HSE++AI FG++ + G IR++KNLRVC DCHTA KFI++I R+II+RD +RFH F
Sbjct: 748 HSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFS 807
Query: 504 EDGKCSCGDYW 514
DGKCSCGDYW
Sbjct: 808 SDGKCSCGDYW 818
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 169/316 (53%), Gaps = 6/316 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN +I A+NG EAL + +M L D T SVL + + +G+EIH
Sbjct: 74 NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQGREIH 130
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GLD+ + ++L+ MYA+ V D+ R+F L +D SWN++I Q+G +
Sbjct: 131 NRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWS 190
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ F++M +KP ++ +++ + L G+++H I+ NGFD ++ +A++L+
Sbjct: 191 GALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALI 249
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY KCG+ AR +FDKM D+VSW +I +G+ H+A+ L+++++ +G K
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKA 309
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV++L ACS + + +S + G+ A+ ++ + G L+EA + +
Sbjct: 310 TFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 305 MHAGPTENVWLTLLSA 320
M W TL+ A
Sbjct: 369 MK-NRDAVAWSTLIGA 383
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 170/312 (54%), Gaps = 6/312 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ D SWN VI+ +++G + AL I ++M ++KP+S T +V+ F+ + +G
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + +G D+++ + ++LINMY KC ++ +F + +D +SWN +I VQN
Sbjct: 227 RKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQN 286
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F E L+ ++++ + K +F SI+ AC+ + L G+ +H I+ G D + +A
Sbjct: 287 GDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAKCG++ AR +F+ M D V+W+ +I A +G DA + ++ G +
Sbjct: 347 TALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR 406
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+++ + A++T G A F MT G+ P + AV + G+L E
Sbjct: 407 -DTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE--- 462
Query: 301 FISNMHAGPTEN 312
+ +HA +E+
Sbjct: 463 -VKALHAQISES 473
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 144/273 (52%), Gaps = 7/273 (2%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
++ +PD+ T +VL + DV +G+ +H + + +G++LI+MY KC + D
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 95 SHRLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ +F + ++ +SWN++IA QNG E L + +M + + HV+F S++ AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
++L G+++H + +G D +A++L+ MYA+ G++ A+ +F + D SW
Sbjct: 121 ---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
AVI+ ++ G+ A+ +F++M+ D +KPNS ++ V++ S ++ + + +
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN 236
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G A+ ++ G+ G EA E M
Sbjct: 237 -GFDSDLVVATALINMYGKCGSSHEAREVFDKM 268
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/515 (41%), Positives = 306/515 (59%), Gaps = 2/515 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +V+W +I G +NG + AL M +++P+ FT + GK
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGK 128
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H A++ G ++V +G S +MY+K E++ ++F +P ++ +WN+ ++ V G
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+D+ L F + I+P SS++ ACA L+ L +GK +H ++ N+F+ S
Sbjct: 189 RYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGS 248
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KDGV 239
+L+DMY KCG+I A FD+M ++V+W A+I G A G A A++LF++M V
Sbjct: 249 ALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRV 308
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V FV VL+ACS AG ++ F SM YGI P EHYA V DLLGRAG +++AY
Sbjct: 309 APNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAY 368
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI M PT +VW LL A ++ EL A+ +F +DP + G +V+LSN +AAA
Sbjct: 369 QFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAG 428
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW++A +R M++ G+KK CSWI N + F A D SH I L +L ME
Sbjct: 429 RWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEME 488
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY+PDT L D+EEE+K ++YHSE++A+ FG+I P G IRI KNLR+CGDCH+
Sbjct: 489 AAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHS 548
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFIS IV REIIVRDN+ FH F D +CSC DYW
Sbjct: 549 AIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
L+NMY+K R + L L P + ++W ++IAG VQNG F L F M I+P
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+F A L + +GKQ+H ++ G ++F+ S DMY+K G AR +FD
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M +I +W A + + L G DA++ F + K+G++P +VL+AC+ +++
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEV 227
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
S K + F +A+ D+ G+ G +++A M P N+
Sbjct: 228 GKSVHTLAVKACVVGNIFVG-SALVDMYGKCGSIEDAERAFDEM---PERNL 275
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 8/240 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN + G Y++AL + ++P F +SSVL A + G
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H A++ + N+ +GS+L++MY KC +ED+ R F +P ++ ++WN++I G
Sbjct: 229 KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQ 288
Query: 121 GLFDEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNM 177
G D + F +M ++ P +V+F ++ AC+ ++++G ++ + R G +
Sbjct: 289 GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGA 348
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAH----DAISLFE 232
+ ++D+ + G + A KM + VS W A++ + + G + A +LFE
Sbjct: 349 EHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFE 408
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM--FIASSLLDMYAKCGNIRLARCIFD 201
S +S++ + LG+ H II+ D+ + FI + L++MY+K A+ +
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS--HAGLI 259
+V+WTA+I G+ +G A+ F M +D ++PN F A + L+
Sbjct: 67 LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
K K I+ F +A D+ +AG +EA + M P N+ W
Sbjct: 127 GKQVHAL--AVKAGQISDVFVGCSAF-DMYSKAGLTEEARKMFDEM---PERNIATWNAY 180
Query: 318 LS 319
LS
Sbjct: 181 LS 182
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 316/511 (61%), Gaps = 5/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +I G +NG A+ + +M + P+ FT S++L I +IH
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS----ILPPQIH 423
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ +G++L+ Y+K ED+ +F ++ KD ++W+++++ Q G +
Sbjct: 424 AQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSL 183
F +M I IKP + SS++ ACA + + G+Q H I+ + D + ++S+L
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSAL 543
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY++ GNI A+ +F++ D+VSW ++I G A HG + AI F QME G++ +
Sbjct: 544 VSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDG 603
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F+AV+ C+H GL+ + YF+SM +D+ I P+ EHYA + DL RAGKL E I
Sbjct: 604 VTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIR 663
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M VW TLL ACRVHKNVEL A+K+ ++P++ YV+LSN YAAA +WK+
Sbjct: 664 DMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKE 723
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R M + +KK CSWI++KNK ++F+A DKSHP +I + LK ++ R++Q+GY
Sbjct: 724 RDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGY 783
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
P+T VLHD+ E+QK+ +L HSERLA+ FG+I TP GT ++I+KNLRVCGDCH +K
Sbjct: 784 SPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKM 843
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S I REII+RD SRFHHF G CSCGD+W
Sbjct: 844 VSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 143/253 (56%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W +++ G A ++ E + + +M + P+ FT +SVL A + G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +++ G ++V + +SL+NMYAKC VED+ +F + +D +SWN+++AG N
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ F + K ++++++ CA+L L L +QLH C++++GF +
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM 340
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L D Y+KCG + A IF ++VSWTA+I G +G+ A+ LF +M +D V
Sbjct: 341 TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRV 400
Query: 240 KPNSVAFVAVLTA 252
PN + A+L A
Sbjct: 401 MPNEFTYSAMLKA 413
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 158/325 (48%), Gaps = 2/325 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V N V+ AR G+ E L+ + DS TLS VL D + G+++H
Sbjct: 65 VGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCL 124
Query: 67 AIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
++ G D V G+SL++MY KC V + +F +P K+ ++W S++ GC + E
Sbjct: 125 CVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSE 184
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F +M I P +F+S++ A A L LG+++H ++ G ++F+ +SL++
Sbjct: 185 VMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMN 244
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG + A+ +F+ M+ D+VSW ++ G L+ +A+ LF + K
Sbjct: 245 MYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQST 304
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ V+ C++ + A + + K +G + A+AD + G+L +A S
Sbjct: 305 YATVIKLCANLKQLALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 306 HAGPTENVWLTLLSACRVHKNVELA 330
W ++S C + ++ LA
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLA 388
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 316/514 (61%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+ SW T++ GL G + EA + M S T ++++ A V G
Sbjct: 179 MPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVG 238
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH A++ G+ + + +LI+MY+KC +ED+H +F +P K + WNSIIA +
Sbjct: 239 KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 298
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L + +M + H + S ++ CA L +L KQ H ++R+GF ++
Sbjct: 299 GYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVAN 358
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D Y+K G + AR +F++M +++SW A+I G HG +A+ +FEQM ++GV
Sbjct: 359 TALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVT 418
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P V F+AVL+ACS++GL + W F SM +D+ + P HYA + +LLGR L EAY
Sbjct: 419 PTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYA 478
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I PT N+W LL+ACR+HKN+EL AEK++ ++P + Y++L N Y ++ +
Sbjct: 479 LIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGK 538
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
K+AA + ++ KG++ PACSW+EVK + YAF+ GDKSH I + + L+ + +
Sbjct: 539 LKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICK 598
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY + + +L DV+EE+++ +L YHSE+LAI FG+I TP T ++I + RVCGDCH+A
Sbjct: 599 HGYAEENETLLPDVDEEEQR-ILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSA 657
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK I+ + REI+VRD SRFHHF +G CSCGDYW
Sbjct: 658 IKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 154/300 (51%), Gaps = 9/300 (3%)
Query: 58 IKG-KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
I+G K + Y I G + ++ + + ++ M+ KC + D+ +LF +P KD SW +++ G
Sbjct: 134 IRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGG 193
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
V G F E + F M R +F++++ A A L + +GKQ+H C ++ G D+
Sbjct: 194 LVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDD 253
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
F++ +L+DMY+KCG+I A C+FD+M V W ++I ALHG + +A+SL+ +M
Sbjct: 254 HFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRD 313
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G + V+ C+ ++ A ++ + +G A A+ D + G+++
Sbjct: 314 SGTTVDHFTISIVIRICARLASLEHAKQAHAALVR-HGFATDIVANTALVDFYSKWGRME 372
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+A + M +NV W L++ H + A ++ E++ + P ++ +LS
Sbjct: 373 DARHVFNRMR---HKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLS 429
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ +++ AC L ++ K++ +I +GF+ ++++ + +L M+ KCG + AR +FD+M
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+ SW ++ G GN +A LF M K+ S F ++ A + GL+ +
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLV-QVG 238
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
+S G+ A+ D+ + G +++A+ M T W +++++ +
Sbjct: 239 KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVG-WNSIIASYAL 297
Query: 324 HKNVELA 330
H E A
Sbjct: 298 HGYSEEA 304
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/520 (42%), Positives = 325/520 (62%), Gaps = 8/520 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D VSWN++IV ++ +AL + ++M K D FTL+SVL +I G++
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCAR---VEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
HG I+ G N +GS LI+ Y+KC + DS ++F + D + WN++I+G
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSM 321
Query: 120 NGLF-DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-M 177
N +E +K FRQM +P SF + AC++L++ GKQ+HG I++ N +
Sbjct: 322 NEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRI 381
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+ +Y K GN+ AR +FD+M + VS+ +I G A HG+ +A+ L+++M
Sbjct: 382 SVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDS 441
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ PN++ FVA+L+AC+H G +D+ YFN+M + + I P EHY+ + DLLGRAGKL+E
Sbjct: 442 GIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A FI M P W LL ACR HKN+ LA + A+++ ++ P YV+L+N YA
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYAD 561
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A +W++ AS+R MR K ++K P CSWIEVK K + FVA D SHP +NE L+E++++
Sbjct: 562 AGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKK 621
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNL---LYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
M++ GYV D K + +E + L +HSE+LA+ FG++ T DG I ++KNLR+C
Sbjct: 622 MKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRIC 681
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GDCH AIKF+S + REIIVRDN RFH F+DGKCSCGDYW
Sbjct: 682 GDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 142/259 (54%), Gaps = 7/259 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D VS+NT+I G A A+ + ++M + + D FTLS ++ D VD+IK
Sbjct: 101 PQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIK-- 158
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCVQN 120
++H +A+ G D+ + ++ + Y+K + ++ +F + ++D +SWNS+I Q+
Sbjct: 159 QLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQH 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L +++M+ K + +S++ A L L G+Q HG +I+ GF N +
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278
Query: 181 SSLLDMYAKCG---NIRLARCIFDKMDLHDIVSWTAVIMGNALH-GNAHDAISLFEQMEK 236
S L+D Y+KCG + + +F ++ D+V W +I G +++ ++ +A+ F QM++
Sbjct: 279 SGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQR 338
Query: 237 DGVKPNSVAFVAVLTACSH 255
G +P+ +FV V +ACS+
Sbjct: 339 IGHRPDDCSFVCVTSACSN 357
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC-------------------------- 89
D+ GK +H ++ + ++ + + +N+Y+KC
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVK 82
Query: 90 -----ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+++ + +LF P D +S+N++I+G + F++M + +
Sbjct: 83 AYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFT 142
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
S ++ AC + L KQLH + GFD + ++ + Y+K G +R A +F MD
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 205 -LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
L D VSW ++I+ H A++L+++M G K + +VL A +
Sbjct: 201 GLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 36/214 (16%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
SF ++ L GK LH +++ + ++++ +++Y+KCG + AR FD
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ ++ S+ ++ A H A LF++ +P++V++ +++ + A A
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDE----NPQPDTVSYNTLISGYADARETVAAM 125
Query: 264 SYFNSMTKD----------------------------YGIAPSFEHYAAVADLL----GR 291
F M + + ++ F+ Y++V + +
Sbjct: 126 VLFKRMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSK 185
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
G L+EA M E W +++ A HK
Sbjct: 186 GGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHK 219
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N +I G A++G EAL + ++M + + P++ T ++L A V +G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG 466
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
K + ++ S +I++ + ++E++ R +P K +++W +++ C
Sbjct: 467 QKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/520 (41%), Positives = 317/520 (60%), Gaps = 14/520 (2%)
Query: 1 MPVS-DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL----PIFADYV 55
MP S ++VSW +I G +N A + +M N+KP+ FT S+VL PI
Sbjct: 363 MPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL--- 419
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+IH I+ +G++L+ Y+K E++ +F ++ KD ++W+++++
Sbjct: 420 -----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLS 474
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFD 174
Q G D F +M + +KP + SS + ACA T + G+Q H I+ +
Sbjct: 475 CYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQ 534
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
D + + S+L+ MYA+ G+I AR +F++ D+VSW ++I G A HG + +A+ F QM
Sbjct: 535 DAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQM 594
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
E G++ + F+AV+ C+HAGL+ + YF+SM D+ I+P+ EHY+ + DL RAGK
Sbjct: 595 ETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGK 654
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
L E I M VW TLL ACRVHKNVEL A+K+ +++P++ YV+LSN
Sbjct: 655 LDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNI 714
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
YAAA RWK+ +R M +K +KK CSWI++KNK ++F+A DKSHP +I LK +
Sbjct: 715 YAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAM 774
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
R++QEGY P+T VLHD+ EEQK+ +L HSERLA+ FG+I TP T ++I+KNLRVC
Sbjct: 775 TTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVC 834
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GDCH +K +S I REII+RD SRFHHF G CSCGD+W
Sbjct: 835 GDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 144/253 (56%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W +++ G + + + + +M + P+ FT +SVL A V G
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H +++ G + V + +SLINMY+KC VE++ +F + +D +SWN+++AG + N
Sbjct: 221 RRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLN 280
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ F + K ++S+++ CA+L L L +QLH C++++GF + +
Sbjct: 281 EHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVM 340
Query: 181 SSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++D Y+KCG + A IF M ++VSWTA+I G + + A +LF +M +D V
Sbjct: 341 TAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNV 400
Query: 240 KPNSVAFVAVLTA 252
KPN + VLTA
Sbjct: 401 KPNEFTYSTVLTA 413
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLL 102
+S VL + D + G+++H ++ G D A V +G++L++MY KC VED +F +
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P ++ ++W S++ G VQ + + F +M + P +F+S++ A A + LG+
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
++H ++ G +F+ +SL++MY+KCG + A+ +F +M+ D+VSW ++ G L+
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+ +A+ LF K + + V+ C++ + A + + K +G
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLK-HGFHSDGNVM 340
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--I 340
A+ D + G+L +A+ M W ++ C + ++ LA + ++ +
Sbjct: 341 TAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNV 400
Query: 341 DPNNMGAYVILSNT 354
PN +L+ +
Sbjct: 401 KPNEFTYSTVLTAS 414
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 324/551 (58%), Gaps = 37/551 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN +I NG + EAL + +++ K T S+L + + +G
Sbjct: 268 MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG 327
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
+ +H + + GLD+ V + ++L+NMYAKC +E++ ++F + +DA
Sbjct: 328 RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASN 387
Query: 108 ---------------------ISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSF 145
ISWN++I VQNG +K FR+M A +KP V+F
Sbjct: 388 GYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTF 447
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+++ ACA L L K LH I + + N+ + ++L++MYA+CG++ A +F
Sbjct: 448 IAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKE 507
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+VSWTA++ + +G +A+ LF++M+ +GVKP+ V + ++L C+H G +++ W Y
Sbjct: 508 KTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRY 567
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F M + + +AP+ +H+AA+ DLLGR+G+L +A E + +M P W+T L+ACR+H
Sbjct: 568 FTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHG 627
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
+EL AE+++ +DP++ Y+ +SN YAA W+ AS+R M +G+KK P S+I
Sbjct: 628 KLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFI 687
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
EV K + F +G K HP I E L L M GYVPDTK VLHDV E +K+ +L Y
Sbjct: 688 EVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLY 747
Query: 446 HSERLAIVFGIICT-PDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF- 503
HSE++AI FG++ + G IR++KNLRVC DCHTA KFI++I R+IIVRD +RFH F
Sbjct: 748 HSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFS 807
Query: 504 EDGKCSCGDYW 514
DGKCSCGDYW
Sbjct: 808 SDGKCSCGDYW 818
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 170/316 (53%), Gaps = 6/316 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN +I A+NG EAL + +M L D T SVL + + +G+EIH
Sbjct: 74 NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQGREIH 130
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GLD+ + ++L+ MYA+ V D+ R+F L +D SWN++I Q+G +
Sbjct: 131 NRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWS 190
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ F++M +KP ++ +++ + L G+++H I+ NGFD ++ +A++L+
Sbjct: 191 GALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALI 249
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY KCG+ AR +FDKM D+VSW +I L+G+ H+A+ L+++++ +G K
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKA 309
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV++L ACS + + +S + G+ A+ ++ + G L+EA + +
Sbjct: 310 TFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 305 MHAGPTENVWLTLLSA 320
M W TL+ A
Sbjct: 369 MK-NRDAVAWSTLIGA 383
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 169/312 (54%), Gaps = 6/312 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ D SWN VI+ +++G + AL I ++M ++KP+S T +V+ F+ + +G
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + +G D ++ + ++LINMY KC ++ +F + +D +SWN +I V N
Sbjct: 227 RKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLN 286
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F E L+ ++++ + K +F SI+ AC+ + L G+ +H I+ G D + +A
Sbjct: 287 GDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAKCG++ AR +F+ M D V+W+ +I A +G DA + ++ G +
Sbjct: 347 TALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR 406
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+++++ A++T G A F MT G+ P + AV + G+L E
Sbjct: 407 -DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE--- 462
Query: 301 FISNMHAGPTEN 312
+ +HA +E+
Sbjct: 463 -VKALHAQISES 473
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 145/273 (53%), Gaps = 7/273 (2%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
++ +PD+ T +VL + DV++G+ +H + + +G++LI+MY KC + D
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 95 SHRLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ +F + ++ +SWN++IA QNG E L + +M + + HV+F S++ AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
++L G+++H + +G D +A++L+ MYA+ G++ A+ +F + D SW
Sbjct: 121 ---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
AVI+ ++ G+ A+ +F++M+ D VKPNS ++ V++ S ++ + + +
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN 236
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G A+ ++ G+ G EA E M
Sbjct: 237 -GFDTDLVVATALINMYGKCGSSHEAREVFDKM 268
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 327/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQ-MGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +LVSWN++IVG N LY+ A+ + + + + P+ ++SSVL A+ +
Sbjct: 71 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 130
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++HG ++ GL + +SL++MY KC ++ +LF + +D ++WN ++ G VQ
Sbjct: 131 GRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ 190
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N F+E +F M I P SFS+++ + A L LH G +H II+ G+ NM I
Sbjct: 191 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 250
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SL+ MYAKCG++ A +F+ ++ H+++SWTA+I LHG A+ I LFE M +G+
Sbjct: 251 LGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGI 310
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V FV VL+ACSH G +++ ++FNSM K + + P EHYA + DLLGRAG L EA
Sbjct: 311 EPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAK 370
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI +M PT +VW LL ACR + N+++ + AE++F ++P N G YV+L+N +
Sbjct: 371 RFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSG 430
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R ++A +R M G++K P CSWI+VKN + F A D+SH I + L++L + ++
Sbjct: 431 RLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVK 490
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
++GYV +T+ V + +EE +++ L+YHSE+LA+ FG++ P + IRI KNLR CG CHT
Sbjct: 491 KKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHT 550
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SKI REIIVRD +RFH F DG CSCGDYW
Sbjct: 551 VMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 183/351 (52%), Gaps = 17/351 (4%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P+ FT SS+L A + V+ G+++H +HG DAN+ +G++L++MYAKCA + + R+
Sbjct: 8 PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTT 157
F +P ++ +SWNS+I G N L+D + F+ +L K + P VS SS++ ACA++
Sbjct: 68 FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 127
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC----GNIRLARCIFDKMDLHDIVSWTA 213
L+ G+Q+HG +++ G ++ +SL+DMY KC ++L +C+ D+ D+V+W
Sbjct: 128 LNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR----DVVTWNV 183
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
++MG + +A + F M ++G+ P+ +F VL + + + + + + + K
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK-L 242
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAG 331
G + ++ + + G L +AY+ + NV W ++SA ++H
Sbjct: 243 GYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE---DHNVISWTAMISAYQLHGCANQVI 299
Query: 332 KVAEKIFM--IDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTP 380
++ E + I+P+++ +LS R + A + M P
Sbjct: 300 ELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGP 350
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 319/517 (61%), Gaps = 17/517 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK--- 61
++V+W +I G +N E+A+++ QM ++P+ FT S+VL GK
Sbjct: 372 NVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA----------GKPSS 421
Query: 62 ---EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++H I+ + + ++L++ Y K V +S R+F +P KD ++W++++ G
Sbjct: 422 LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLA 481
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNM 177
Q ++ ++ F Q++ +KP +FSS++ AC+ T+ GKQ+H +++G + +
Sbjct: 482 QTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNAL 541
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++S+LL MY+K GNI A +F + + DIVSW ++I G HG+A A+ +F+ M+
Sbjct: 542 CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ + V F+ VLTAC+HAGL+++ YFN M KDY I EHY+ + DL RAG +
Sbjct: 602 GLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDK 661
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + I+ M + +W TLL+ACRVH+N+EL AEK+ + PN+ YV+LSN +A
Sbjct: 662 AMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAV 721
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A W++ A +R M + +KK CSWIE+KN+ ++F+AGD SHPF + L+EL +
Sbjct: 722 AGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIK 781
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GY PDT V HDVEEE K+ +L HSERLAI +G+I P G I+I KNLR+CGDC
Sbjct: 782 LKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDC 841
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H I+ IS I +R +IVRD++RFHHF+ G CSCG YW
Sbjct: 842 HNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 144/253 (56%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + ++VSW +++ G ARNGL +E ++++ QM + P+ FT ++VL AD + G
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +++G + + ++LI MY K V D+ +F + V+D+++WN +I G
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + EG + F +M +A +K F + + C+ L+ KQLH +++NG++ I
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+KC ++ A +F D H++V+WTA+I G + N A+ LF QM ++GV
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGV 404
Query: 240 KPNSVAFVAVLTA 252
+PN + VL
Sbjct: 405 RPNHFTYSTVLAG 417
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 136/254 (53%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P+ D+ +N ++ +RN EAL++ + + + L D TLS L + D + G+
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H +++ G +V +G+SL++MY K ED +F + +K+ +SW S+++G +NG
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L DE + QM + + P +F++++ A A + + G Q+H I++NGF+ F+ +
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MY K + A +FD M + D V+W +I G A G + +F +M GVK
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304
Query: 242 NSVAFVAVLTACSH 255
+ F L CS
Sbjct: 305 SRTVFCTALKLCSQ 318
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 111/205 (54%), Gaps = 2/205 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
+P D+V+W+ ++ GLA+ E+A+ + Q+ +KP+ +T SSV+ + ++
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+IH A++ G +C+ S+L+ MY+K +E + ++F +D +SWNS+I G Q
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G + L+ F+ M + V+F ++ AC H + G++ +I++ D +
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIE 644
Query: 179 IASSLLDMYAKCGNIRLARCIFDKM 203
S ++D+Y++ G A I + M
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGM 669
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 93/171 (54%)
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+R +H+LF P+KD +N ++ +N E L F+ + + + ++ S +
Sbjct: 52 SRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCAL 111
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
C L +G+Q+H +++GF +++ + +SL+DMY K + R IFD+M + ++V
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
SWT+++ G A +G + I L QM+ +GV PN F VL A + +I+
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIE 222
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 315/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D +++++ ++ G + + R+M ++T +SV+ AD + G
Sbjct: 149 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLG 208
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH + + G +++ + ++LI +YAK + ++ + ++F +P + I+WNS+I+G QN
Sbjct: 209 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN 268
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + F M+ + +P + S++ +C+ L L G LH NGFD N+ +
Sbjct: 269 GLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 328
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MY +CGN+ AR +FD M ++V+WTA+I G +HG A+ LF +M G +
Sbjct: 329 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 388
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN++ FVAVL+AC+H+GLID F+SM + YG+ P EH + D+ GRAG L +AY+
Sbjct: 389 PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQ 448
Query: 301 FISN-MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI + P VW ++L ACR+H+N +L KVAE + ++P N G YV+LSN YA A
Sbjct: 449 FIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAG 508
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R +R M + +KK S IE+ K Y F GDKSHP + I L EL+ R
Sbjct: 509 RMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCS 568
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP + ++HD+EEE++ L YHSE+LA+ FG++ T G TIRI+KNLR+C DCH+
Sbjct: 569 ESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHS 628
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS I REIIVRD RFHHF+DG CSC DYW
Sbjct: 629 AIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 156/304 (51%), Gaps = 24/304 (7%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + I GL + + + LI++ + + RLF +P D+ ++S++ +
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F+R+ML + + +F+S++ ACA L+ L LGK++H ++ G+ +M++
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +YAK ++++A+ +FD M I++W ++I G +G ++I LF M + G +
Sbjct: 228 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 287
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQ 296
P+S V++L++CS G +D F DY F+ ++ ++ R G +
Sbjct: 288 PDSATIVSLLSSCSQLGALD-----FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 342
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM------IDPNNMGAY 348
+A E +M NV W ++S +H G+ A ++F PNN+
Sbjct: 343 KAREVFDSMKE---RNVVTWTAMISGYGMHG----YGRQAMELFTEMRAYGPRPNNITFV 395
Query: 349 VILS 352
+LS
Sbjct: 396 AVLS 399
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/510 (41%), Positives = 315/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+ N +I G + G ++EAL++ ++ L + TL++VL A +++H
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ G + + + LI+ Y KC+ + D++R+F D I+ S+I Q +
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+K F +ML ++P SS++ ACA L+ GKQ+H +I+ F + F ++L+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
YAKCG+I A F + +VSW+A+I G A HG+ A+ LF +M +G+ PN +
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+VL AC+HAGL+D+A YFNSM + +GI + EHY+ + DLLGRAGKL +A E +++
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M ++W LL A RVHK+ EL AEK+F+++P G +V+L+NTYA+A W +
Sbjct: 668 MPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEV 727
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M++ +KK PA SWIEVK+K + F+ GDKSHP I L EL + M + G+V
Sbjct: 728 AKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFV 787
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ LHD++ +K+ LL +HSERLA+ F ++ TP G IR+ KNLR+C DCH A KFI
Sbjct: 788 PNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFI 847
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV REII+RD +RFHHF DG CSCGDYW
Sbjct: 848 SKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 141/255 (55%), Gaps = 4/255 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW++++ + NGL A+ M + + F L VL D G ++H
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---ARLGAQVHAM 125
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQNGLFDE 125
A+ G ++V + ++L+ MY ++D+ R+F ++A+SWN +++ V+N +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F +M+ + I+P FS ++ AC + G+Q+H ++R G+D ++F A++L+D
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVD 245
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY K G + +A IF+KM D+VSW A+I G L+G+ H AI L QM+ G+ PN
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFT 305
Query: 246 FVAVLTACSHAGLID 260
++L ACS AG D
Sbjct: 306 LSSILKACSGAGAFD 320
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSWN ++ +N +A+ + +M ++P F S V+ ++ G+++H
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAM 227
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R G D +V ++L++MY K RV+ + +F +P D +SWN++I+GCV NG
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ QM + + P + SSI+ AC+ LG+Q+HG +I+ D + +I L+DM
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKDGVKPNSVA 245
YAK + AR +FD M D++ A+I G + HG HD A+SLF ++ K+G+ N
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCS-HGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 246 FVAVLTA 252
AVL +
Sbjct: 407 LAAVLKS 413
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 179/357 (50%), Gaps = 12/357 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP SD+VSWN +I G NG A+ ++ QM L P+ FTLSS+L + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG+ I+ D++ IG L++MYAK ++D+ ++F + +D I N++I+GC
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L F ++ + + ++++ + A L +Q+H ++ GF + +
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV 442
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D Y KC + A +F++ DI++ T++I + + AI LF +M + G++
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ ++L AC+ ++ + K ++ +F A V + G +++A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY-TYAKCGSIEDAEL 561
Query: 301 FISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYVIL 351
S++ P V W ++ H + +EL G++ ++ I+PN++ +L
Sbjct: 562 AFSSL---PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE--GINPNHITMTSVL 613
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 16/294 (5%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T+S L +A ++ G +H ++ G A+ + LI+ Y+KC R + R F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEI 63
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S++ NGL ++ F M + + ++ + LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGA 120
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
Q+H + GF ++F+A++L+ MY G + AR +F++ D + VSW ++ +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
DAI +F +M G++P F V+ AC+ + I+ A ++M G
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE-AGRQVHAMVVRMGYDKDVFT 239
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRV----HKNVEL 329
A+ D+ + G++ A M P +V W L+S C + H+ +EL
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKM---PDSDVVSWNALISGCVLNGHDHRAIEL 290
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVDVI 58
+P +VSW+ +I GLA++G + AL + +M + + P+ T++SVL A VD
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
K + + G+D S +I++ + +++D+ L +P + +A W +++
Sbjct: 626 K-RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/480 (43%), Positives = 305/480 (63%), Gaps = 5/480 (1%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD+ T ++ A + + +G+ +H A ++G V + +SL+++Y C E +H++
Sbjct: 802 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 861
Query: 99 FCLLPVK--DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
F +PV+ + +SWNS++ NG +E L F +ML P + S++ ACA
Sbjct: 862 FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG 921
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVI 215
L LG+++H + + G +N ++++L+D+YAKCG++ AR IF++M L +VSWT++I
Sbjct: 922 ALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 981
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+G A +G +A+ LF ME++ + P + V VL ACSH GL+D + YF+ M +DYGI
Sbjct: 982 VGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGI 1041
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA- 334
+P EH + DLLGRAG+++EAY++I M P VW TLL +C +HK +EL GKVA
Sbjct: 1042 SPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL-GKVAW 1100
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
E++ +DP + G YV+LSN YAA W D LR M ++K P S +E++N Y F
Sbjct: 1101 ERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEF 1160
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
V GD+SHP +I E L E+ ER+ +EGY+P T VL D+EEE+K+ L YHSERLAI F
Sbjct: 1161 VMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAF 1220
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ + G IRIIKNLR+CGDCH A ISK+ REIIVRD SRFHHF+ G CSC DYW
Sbjct: 1221 ALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 1280
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 1 MPVS--DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV +LVSWN+++ A NG E L + +M V+ PD FT+ SVL A++ +
Sbjct: 865 MPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALA 924
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGC 117
G+ +H Y + GL N + ++LI++YAKC V D+ R+F + + + +SW S+I G
Sbjct: 925 LGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGL 984
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDN 176
NG E L+ F M K+ P ++ ++ AC+H + G + + + G
Sbjct: 985 AANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPR 1044
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
+ ++D+ + G + A M L + V W ++ A+H
Sbjct: 1045 IEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 1090
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/510 (41%), Positives = 315/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+ N +I G + G ++EAL++ ++ L + TL++VL A +++H
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ G + + + LI+ Y KC+ + D++R+F D I+ S+I Q +
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+K F +ML ++P SS++ ACA L+ GKQ+H +I+ F + F ++L+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
YAKCG+I A F + +VSW+A+I G A HG+ A+ LF +M +G+ PN +
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+VL AC+HAGL+D+A YFNSM + +GI + EHY+ + DLLGRAGKL +A E +++
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M ++W LL A RVHK+ EL AEK+F+++P G +V+L+NTYA+A W +
Sbjct: 668 MPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEV 727
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M++ +KK PA SWIEVK+K + F+ GDKSHP I L EL + M + G+V
Sbjct: 728 AKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFV 787
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ LHD++ +K+ LL +HSERLA+ F ++ TP G IR+ KNLR+C DCH A KFI
Sbjct: 788 PNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFI 847
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV REII+RD +RFHHF DG CSCGDYW
Sbjct: 848 SKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 141/255 (55%), Gaps = 4/255 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW++++ + NGL A+ M + + F L VL D G ++H
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---ARLGAQVHAM 125
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQNGLFDE 125
A+ G ++V + ++L+ MY ++D+ R+F ++A+SWN +++ V+N +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F +M+ + I+P FS ++ AC + G+Q+H ++R G+D ++F A++L+D
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVD 245
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY K G + +A IF+KM D+VSW A+I G L+G+ H AI L QM+ G+ PN
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFT 305
Query: 246 FVAVLTACSHAGLID 260
++L ACS AG D
Sbjct: 306 LSSILKACSGAGAFD 320
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSWN ++ +N +A+ + +M ++P F S V+ ++ G+++H
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAM 227
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R G D +V ++L++MY K RV+ + +F +P D +SWN++I+GCV NG
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ QM + + P + SSI+ AC+ LG+Q+HG +I+ D + +I L+DM
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKDGVKPNSVA 245
YAK + AR +FD M D++ A+I G + HG HD A+SLF ++ K+G+ N
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCS-HGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 246 FVAVLTA 252
AVL +
Sbjct: 407 LAAVLKS 413
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 179/357 (50%), Gaps = 12/357 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP SD+VSWN +I G NG A+ ++ QM L P+ FTLSS+L + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG+ I+ D++ IG L++MYAK ++D+ ++F + +D I N++I+GC
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L F ++ + + ++++ + A L +Q+H ++ GF + +
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV 442
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D Y KC + A +F++ DI++ T++I + + AI LF +M + G++
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ ++L AC+ ++ + K ++ +F A V + G +++A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY-TYAKCGSIEDAEL 561
Query: 301 FISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYVIL 351
S++ P V W ++ H + +EL G++ ++ I+PN++ +L
Sbjct: 562 AFSSL---PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE--GINPNHITMTSVL 613
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 16/294 (5%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T+S L +A ++ G +H ++ G A+ + LI+ Y+KC R + R+F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRVFDEI 63
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S++ NGL ++ F M + + ++ + LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGA 120
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
Q+H + GF ++F+A++L+ MY G + AR +F++ D + VSW ++ +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
DAI +F +M G++P F V+ AC+ + I+ A ++M G
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE-AGRQVHAMVVRMGYDKDVFT 239
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRV----HKNVEL 329
A+ D+ + G++ A M P +V W L+S C + H+ +EL
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKM---PDSDVVSWNALISGCVLNGHDHRAIEL 290
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVDVI 58
+P +VSW+ +I GLA++G + AL + +M + + P+ T++SVL A VD
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
K + + G+D S +I++ + +++D+ L +P + +A W +++
Sbjct: 626 K-RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 315/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D +++++ ++ G + + R+M ++T +SV+ AD + G
Sbjct: 85 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLG 144
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH + + G +++ + ++LI +YAK + ++ + ++F +P + I+WNS+I+G QN
Sbjct: 145 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN 204
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + F M+ + +P + S++ +C+ L L G LH NGFD N+ +
Sbjct: 205 GLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 264
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MY +CGN+ AR +FD M ++V+WTA+I G +HG A+ LF +M G +
Sbjct: 265 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 324
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN++ FVAVL+AC+H+GLID F+SM + YG+ P EH + D+ GRAG L +AY+
Sbjct: 325 PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQ 384
Query: 301 FISN-MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI + P VW ++L ACR+H+N +L KVAE + ++P N G YV+LSN YA A
Sbjct: 385 FIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAG 444
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R +R M + +KK S IE+ K Y F GDKSHP + I L EL+ R
Sbjct: 445 RMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCS 504
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP + ++HD+EEE++ L YHSE+LA+ FG++ T G TIRI+KNLR+C DCH+
Sbjct: 505 ESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHS 564
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS I REIIVRD RFHHF+DG CSC DYW
Sbjct: 565 AIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 156/304 (51%), Gaps = 24/304 (7%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + I GL + + + LI++ + + RLF +P D+ ++S++ +
Sbjct: 44 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F+R+ML + + +F+S++ ACA L+ L LGK++H ++ G+ +M++
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +YAK ++++A+ +FD M I++W ++I G +G ++I LF M + G +
Sbjct: 164 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 223
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQ 296
P+S V++L++CS G +D F DY F+ ++ ++ R G +
Sbjct: 224 PDSATIVSLLSSCSQLGALD-----FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 278
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM------IDPNNMGAY 348
+A E +M NV W ++S +H G+ A ++F PNN+
Sbjct: 279 KAREVFDSMKE---RNVVTWTAMISGYGMHG----YGRQAMELFTEMRAYGPRPNNITFV 331
Query: 349 VILS 352
+LS
Sbjct: 332 AVLS 335
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/512 (41%), Positives = 317/512 (61%), Gaps = 2/512 (0%)
Query: 5 DLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D +NT+I A+ G ++AL + M + + P+ FT VL A + G+ +
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
HG ++ G D ++ + +++++MY+ CA + + ++F +P D+++W+++I G + G
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E + FR+M +A++ P ++ S++ AC L L LGK + I R+ + ++++
Sbjct: 215 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNA 274
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DM+AKCG+I A +F M+ IVSWT+VI+G A+HG +A LFE+M GV P+
Sbjct: 275 LIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPD 334
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
VAF+ +L+ACSH+GL+++ YF SM K Y + P EHY + D+ R G ++EA EF+
Sbjct: 335 DVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV 394
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
NM P + TL+SACR H +L K+ + + +P + YV+LSN YA W+
Sbjct: 395 RNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWE 454
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+R M KGMKK P + IE+ N+ Y FVAGDKSH + I E + E+ M++ G
Sbjct: 455 KKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSG 514
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
Y P T EVL D+ EE K++ L HSE+LAI FG++ TP GT IRI+KNLRVC DCH+A K
Sbjct: 515 YRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASK 574
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISKI REII+RD +RFHHF+ G+CSCGD+W
Sbjct: 575 FISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP SD V+W+ +I G AR G EA+ + R+M + PD T+ S+L D + G
Sbjct: 194 MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELG 253
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I Y RH + V + ++LI+M+AKC + + +LF + K +SW S+I G +
Sbjct: 254 KWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMH 313
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E F +M + + P V+F ++ AC+H + G++ G +++ +
Sbjct: 314 GRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEH 373
Query: 180 ASSLLDMYAKCGNIRLA 196
++DMY + G ++ A
Sbjct: 374 YGCMVDMYCRTGLVKEA 390
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 319/514 (62%), Gaps = 1/514 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ SW +I RN L AL R M PD+ +S++ AD ++ G+
Sbjct: 93 PDPNVFSWMMLISACLRNALPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGR 152
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
I + + + +SL+NMY +C ++D R F +P +D +SW +++AG +Q G
Sbjct: 153 SITAPLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCG 212
Query: 122 LFDEGLKFFRQMLIAKIK-PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ R M + ++F++++ AC +L+ + G+ LH II +G ++ +
Sbjct: 213 REASALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLH 272
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL+MYAKCG + AR +FD+ + ++++++++ A +G+ DA+ LF ME+DG K
Sbjct: 273 TALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLFWSMEQDGYK 332
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F VL ACSH G +D+AW YF ++ D GI EH+ DLL RAG L +A +
Sbjct: 333 PDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEK 392
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F++ M P W++LL ACR+H+NVE+ + AE +F + P+ G Y +LSN Y+ A +
Sbjct: 393 FLNRMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGK 452
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA ++ MR++G+KK SWIE+ K F+ GD HP +I + ++ + + M++
Sbjct: 453 WDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKE 512
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDTK+VLHD EEE+K+++LY+HSE+LAI G+I TP TTI I+KN+RVC DCHTA
Sbjct: 513 HGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTA 572
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK+ +R+I++RD + FHH EDGKCSC DYW
Sbjct: 573 AKVISKVTERKIVIRDINLFHHMEDGKCSCRDYW 606
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ ++H + G + + + L+ Y +C VE +H +F P + SW +I+ C+
Sbjct: 49 QAHQLHALMLATGALRSRYLSNKLVQAYGQCGDVESAHAVFACQPDPNVFSWMMLISACL 108
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+N L L +R M + P S+I A A L LG+ + + +
Sbjct: 109 RNALPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHDPV 168
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+SLL+MY +CG + F M D VSWT ++ G G A+ L M++DG
Sbjct: 169 VANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMDQDG 228
Query: 239 VKPNS-VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ S + F ++ AC + I + + + G+ + A+ ++ + G++ E
Sbjct: 229 FRITSALTFATLVDACGNLSAIAQG-RHLHDRIITSGVCIDVVLHTALLNMYAKCGRVDE 287
Query: 298 AYEFISN 304
A E
Sbjct: 288 ARELFDQ 294
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA L QLH ++ G + ++++ L+ Y +CG++ A +F ++ SW
Sbjct: 41 CAAERALPQAHQLHALMLATGALRSRYLSNKLVQAYGQCGDVESAHAVFACQPDPNVFSW 100
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+I + A+ + M+ G P++ A+ A +
Sbjct: 101 MMLISACLRNALPRAALGHYRAMQLRGCHPDAHVVSAIFCAVA 143
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 318/550 (57%), Gaps = 36/550 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-----YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
M D++SW+ +I G A++G +E ++ +M + P+ T S+L +
Sbjct: 319 MSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHG 378
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARV----------------------- 92
+ +G++IH + G + + + +++ NMYAKC +
Sbjct: 379 ALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLS 438
Query: 93 --------EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+ ++F +P ++ +SWN +IAG QNG + + M +P V+
Sbjct: 439 MYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVT 498
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+I+ AC L L GK +H ++ G + + +A+SL+ MY+KCG + AR +FDKM
Sbjct: 499 VITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS 558
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D V+W A++ G HG+ +A+ LF++M K+ V PN + AV++ACS AGL+ +
Sbjct: 559 NRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGRE 618
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
F M +D+ + P +HY + DLLGRAG+LQEA EFI +M P +VW LL AC+ H
Sbjct: 619 IFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSH 678
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
NV+LA + A I ++P+ Y+ LSN YA A RW D+ +R M ++G+KK S
Sbjct: 679 NNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESS 738
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
IE+ + + FVA D +HP I+ L+ L + M++ GY PD + VLHDV++ QK+ L
Sbjct: 739 IEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALC 798
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
+HSE+LAI +G++ TP GT IRI+KNLRVCGDCHTA KFISKI +REI+ RD +RFH+F
Sbjct: 799 HHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFN 858
Query: 505 DGKCSCGDYW 514
+G CSCGD+W
Sbjct: 859 NGTCSCGDFW 868
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 175/324 (54%), Gaps = 7/324 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+V+W+++I A N +A + +M + N++P+ T S+L +Y + KG
Sbjct: 117 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKG 176
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH G++ +V + ++LI MY+KC + + +F + ++ +SW +II Q+
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQH 236
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E + + QML A I P V+F S++ +C L+ G+++H I G + +M +A
Sbjct: 237 RKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVA 296
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-----NAHDAISLFEQME 235
++L+ MY KC +++ AR IFD+M D++SW+A+I G A G + + L E+M
Sbjct: 297 NALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMR 356
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++GV PN V F+++L AC+ G +++ ++K G A+ ++ + G +
Sbjct: 357 REGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK-VGFELDRSLQTAIFNMYAKCGSI 415
Query: 296 QEAYEFISNMHAGPTENVWLTLLS 319
EA + S M A W + LS
Sbjct: 416 YEAEQVFSKM-ANKNVVAWTSFLS 438
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 156/297 (52%), Gaps = 6/297 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W G R + + L I++Q G L +S T V+ A GK +H
Sbjct: 29 WRLCKAGRLREAI--QLLGIIKQRG---LLVNSNTYGCVIEHCAKARRFEDGKMVHKQLD 83
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
G++ ++ +G+SLIN Y+K V + ++F + ++D ++W+S+IA N +
Sbjct: 84 ELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFD 143
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M A I+P ++F SI+ AC + + L G+++H + G + ++ +A++L+ MY+
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS 203
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG I +A +F KM ++VSWTA+I NA H ++A L+EQM + G+ PN+V FV+
Sbjct: 204 KCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVS 263
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+L +C+ +++ +S + G+ A+ + + +QEA E M
Sbjct: 264 LLNSCNTPEALNRG-RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 37/295 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +I A++ EA + QM + P++ T S+L + +G
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + GL+ ++ + ++LI MY KC V+++ +F + +D ISW+++IAG Q+
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 121 GL-----FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G DE + +M + P V+F SI+ AC L G+Q+H + + GF+
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKM-------------------DL----------- 205
+ + +++ +MYAKCG+I A +F KM DL
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP 457
Query: 206 -HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC-SHAGL 258
++VSW +I G A +G+ L M+ +G +P+ V + +L AC + AGL
Sbjct: 458 TRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/516 (40%), Positives = 321/516 (62%), Gaps = 3/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP--IFADYVDVI 58
MP ++VSW +I G ++N EA ++ M +P+ FTL+SVL + +
Sbjct: 96 MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ K++H +AI+ + ++ +GSSL++MYA+ ++++ R+F +LP +D +S+ +I++G
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYT 215
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ GL +E L FRQ+ ++ V+FS ++ A + L+++ GKQ+HG I+R M
Sbjct: 216 RLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMA 275
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMY+KCG + +R +FD M +VSW A++MG HG A++ + LF M D
Sbjct: 276 LQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDK 334
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+SV +AVL SH GL+D+ F+ + K+ + +HY V DLLGR+G+L++A
Sbjct: 335 VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKA 394
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
I M PT +W +LL ACRVH NV + VA+K+F I+P N G YVILSN YAAA
Sbjct: 395 LLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAA 454
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
R WKD LR M K + K P SW+ + + F + ++ HP IN + E+ +
Sbjct: 455 RMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAI 514
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ G+VPD VLHDV++EQK+ +L HSE+LAI FG++ TP TI+++KNLR+C DCH
Sbjct: 515 KAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCH 574
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ REI +RD +RFH +G C+CGDYW
Sbjct: 575 NFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H + G + + + L+ MYA+C +ED+H + +P ++ +SW ++I+G
Sbjct: 53 EGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYS 112
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDN 176
QN E F ML A +P + +S++ +C +H KQ+H I+ F+ +
Sbjct: 113 QNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELH 172
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
MF+ SSLLDMYA+ NI+ AR +FD + D+VS+T ++ G G +A++LF Q+
Sbjct: 173 MFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYN 232
Query: 237 DGVKPNSVAFVAVLTACSHAGLID 260
+G++ N V F +L A S +D
Sbjct: 233 EGMQCNQVTFSVLLNALSGLSSMD 256
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R + + + C L G+Q+H ++ G+ +++A+ L+ MYA+CG + A +
Sbjct: 34 RFHDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVL 93
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D M ++VSWTA+I G + + +A LF M + G +PN +VLT+C+ + I
Sbjct: 94 DGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIH 153
Query: 261 KAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQEAYEFISNMHAGPTENV--W 314
+ + + I +FE + +++ D+ R+ +QEA + P +V +
Sbjct: 154 Q---HQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDML---PARDVVSY 207
Query: 315 LTLLSA 320
T+LS
Sbjct: 208 TTILSG 213
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/460 (43%), Positives = 297/460 (64%), Gaps = 1/460 (0%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
DV G+ IH IR G + + + +SL+++YA C V ++++F +P KD ++WNS+I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G +NG +E L + +M IKP + S++ ACA + L LGK++H +I+ G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ ++ LLD+YA+CG + A+ +FD+M + VSWT++I+G A++G +AI LF+ ME
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 236 K-DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+G+ P + FV +L ACSH G++ + + YF M ++Y I P EH+ + DLL RAG+
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+++AYE+I +M P +W TLL AC VH + +LA +I ++PN+ G YV+LSN
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
YA+ +RW D +R M G+KK P S +EV N+ + F+ GDKSHP I LKE+
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
R+ EGYVP V DVEEE+K+N + YHSE++AI F +I TP+ + I ++KNLRVC
Sbjct: 363 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 422
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH AIK +SK+ REI+VRD SRFHHF++G CSC DYW
Sbjct: 423 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 133/246 (54%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV+WN+VI G A NG EEAL + +M + +KPD FT+ S+L A + G
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y I+ GL N+ + L+++YA+C RVE++ LF + K+++SW S+I G N
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E ++ F+ M + + P ++F I+ AC+H + G + +R + I
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR-RMREEYKIEPRI 227
Query: 180 A--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+ A+ G ++ A M + ++V W ++ +HG++ ++ F +++
Sbjct: 228 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQI 285
Query: 237 DGVKPN 242
++PN
Sbjct: 286 LQLEPN 291
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ + LG+ +H +IR+GF +++ +SLL +YA CG++ A +FDKM D+V+W +V
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I G A +G +A++L+ +M G+KP+ V++L+AC+ G + M K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + DL R G+++EA M
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/438 (44%), Positives = 293/438 (66%)
Query: 77 CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA 136
C+G+SLI+MYA+ R+ED+ + F +L K+ +S+N+I+ G +N +E F ++
Sbjct: 60 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 119
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
I +F+S++ A + + G+Q+HG +++ G+ N I ++L+ MY++CGNI A
Sbjct: 120 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 179
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+F++M+ +++SWT++I G A HG A A+ +F +M + G KPN + +VAVL+ACSH
Sbjct: 180 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 239
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLT 316
G+I + +FNSM K++GI P EHYA + DLLGR+G L EA EFI++M VW T
Sbjct: 240 GMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRT 299
Query: 317 LLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGM 376
LL ACRVH N EL AE I +P++ AY++LSN +A+A +WKD +R M+ + +
Sbjct: 300 LLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 359
Query: 377 KKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEE 436
K CSWIEV+N+ + F G+ SHP +I + L +L ++++ GY+PDT VLHD+EE
Sbjct: 360 IKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEE 419
Query: 437 EQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRD 496
EQK+ L+ HSE++A+ FG+I T IRI KNLRVCGDCHTAIK+IS REI+VRD
Sbjct: 420 EQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRD 479
Query: 497 NSRFHHFEDGKCSCGDYW 514
++RFHH ++G CSC DYW
Sbjct: 480 SNRFHHIKNGVCSCNDYW 497
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 125/239 (52%), Gaps = 6/239 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVS+N ++ G A+N EEA + ++ + + +FT +S+L A + KG++IH
Sbjct: 89 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 148
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G +N CI ++LI+MY++C +E + ++F + ++ ISW S+I G ++G
Sbjct: 149 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 208
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSL 183
L+ F +ML KP +++ +++ AC+H+ + G K + +G M + +
Sbjct: 209 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 268
Query: 184 LDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA----HDAISLFEQMEKD 237
+D+ + G + A + M L D + W ++ +HGN H A + EQ D
Sbjct: 269 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDD 327
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/518 (40%), Positives = 324/518 (62%), Gaps = 7/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP DLVSWN+++ GL+ G LN R +P+ TL SV+ A + +
Sbjct: 200 MPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +HG ++ G+ + +SLINMY K ++ + +LF +PV+ +SWNS++
Sbjct: 260 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 319
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ---LHGCIIRNGFDDN 176
NG ++G+ F M A I P + +++ AC T LG+Q +H I R GF+ +
Sbjct: 320 NGYAEKGMDLFNLMKRAGINPDQATMVALLRAC---TDTGLGRQAESIHAYIHRCGFNAD 376
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ IA++LL++YAK G + + IF+++ D ++WTA++ G A+H +AI LF+ M K
Sbjct: 377 IIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVK 436
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+GV+ + V F +L+ACSH+GL+++ YF M++ Y + P +HY+ + DLLGR+G+L+
Sbjct: 437 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 496
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+AYE I +M P+ VW LL ACRV+ NVEL +VAE++ +DP++ Y++LSN Y+
Sbjct: 497 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 556
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA W+ A+ +R M+ + + + P CS+IE NK + FV GD+ HP I+ L+EL+
Sbjct: 557 AAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 616
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ + G P T+ VLHD++EE K +++ HSE+LAI FG++ T G + I KNLR+CGD
Sbjct: 617 KIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 676
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+ KF S + +R II+RD+ RFHHF DG CSC DYW
Sbjct: 677 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 151/309 (48%), Gaps = 8/309 (2%)
Query: 31 QMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
++ N +L DS S V I + V IH I+ ++ IG L++MY K
Sbjct: 130 KLHNSSLLADSIVQSLVFAI-SSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG 188
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIM 149
ED+ RLF +P +D +SWNS+++G G L F +M + +P V+ S++
Sbjct: 189 YDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
ACA + L GK LHG +++ G + +SL++MY K G + A +F++M + +V
Sbjct: 249 SACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 308
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW ++++ + +G A + LF M++ G+ P+ VA+L AC+ GL +A S ++
Sbjct: 309 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES-IHAY 367
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
G A+ +L + G+L + + + T W +L+ VH
Sbjct: 368 IHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDT-IAWTAMLAGYAVHA---- 422
Query: 330 AGKVAEKIF 338
G+ A K+F
Sbjct: 423 CGREAIKLF 431
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/431 (46%), Positives = 287/431 (66%), Gaps = 2/431 (0%)
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
Y K +E + +LF +PVKD +SW+++I G NG F E FFR++ ++P VS
Sbjct: 213 YTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSL 272
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-D 204
+ + ACA + GK LHG I ++GF + + ++LLD Y+KCGN+ +AR +F++M +
Sbjct: 273 TGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPE 332
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
IVSWT++I G A+HG +AI LF +ME+ G++P+ +AF+++L ACSHAGLI+K +
Sbjct: 333 KRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYE 392
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
YF M Y I P+ EHY + DL GRAG+L +AYEFI +M PT +W TLL AC +H
Sbjct: 393 YFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIH 452
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
NV+LA +V E++ +DPNN G +V+LSN YA A +WKD A++R M ++ M KTP S
Sbjct: 453 GNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSM 512
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG-YVPDTKEVLHDVEEEQKKNLL 443
IEV Y+FVAG+ + E LKE++ ++ EG Y+P+ VLHD+E+E+K++ +
Sbjct: 513 IEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSV 572
Query: 444 YYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF 503
HSE+LA+ FGI G+ IRI+KNLRVC DCHT +K ISK+ EI+VRD SRFH F
Sbjct: 573 SRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSF 632
Query: 504 EDGKCSCGDYW 514
+ G CSC DYW
Sbjct: 633 KTGSCSCRDYW 643
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 7/247 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D VSW+T+IVG A NG + EA R++ V ++P+ +L+ L AD + G
Sbjct: 229 MPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFG 288
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI-SWNSIIAGCVQ 119
K +HG+ + G V + ++L++ Y+KC V + +F +P K +I SW S+IAG
Sbjct: 289 KILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAM 348
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E ++ F +M + I+P ++F SI+ AC+H + G + + +++ ++ I
Sbjct: 349 HGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYE-YFYKMKDIYNIEPAI 407
Query: 180 A--SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+Y + G + A M L + W ++ ++HGN A + E++ +
Sbjct: 408 EHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSE 467
Query: 237 DGVKPNS 243
+ PN+
Sbjct: 468 --LDPNN 472
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 162/381 (42%), Gaps = 47/381 (12%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA--RVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K++H Y + GLD + I L+ A ++ + RLF P D N++I G
Sbjct: 22 KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLA 81
Query: 119 QNGLFDEGLKFFRQMLIAKIKP-RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
++ L F +M P SF+ ++ A A +L G QLH I +G D ++
Sbjct: 82 ESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHL 141
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ ++L+ MY++CG + A+ +F++M ++V+W AV+ G+ A +F +M
Sbjct: 142 FVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFR 201
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA--GKL 295
N ++ +L + AG ++ A F M P + + ++G A G
Sbjct: 202 ----NLTSWNVMLAGYTKAGELELARKLFLEM-------PVKDDVSWSTMIVGFAHNGFF 250
Query: 296 QEAYEFISNMHA---GPTENVWLTLLSACRVHKNVELAGKV----AEK---IFMIDPNNM 345
EA+ F + P E LSAC +E GK+ EK ++M+ NN
Sbjct: 251 YEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEF-GKILHGFIEKSGFLWMVSVNNA 309
Query: 346 GAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYH 405
L +TY+ + + R+ K++ SW + +AG H +
Sbjct: 310 -----LLDTYS---KCGNVGMARLVFERMPEKRS-IVSWT-------SMIAGLAMHGY-- 351
Query: 406 RINEALKELLERMEQEGYVPD 426
E +L ME+ G PD
Sbjct: 352 --GEEAIQLFHEMEESGIRPD 370
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/510 (41%), Positives = 321/510 (62%), Gaps = 21/510 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L +N +I GLA N +E +++ M ++++PD TL VL A VDV G+ +H
Sbjct: 102 NLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLH 161
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL+ + + SL++MY K + +LF P ++ SI+ + NG
Sbjct: 162 GGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKA--ESIL---LWNG--- 213
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
++P ++ S + AC + L +G+++H + NGF N I ++L+
Sbjct: 214 -------------VRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALV 260
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCGNI+ A +F + D+++W+ +I G A+HG A+ F +M+ G+ P+ V
Sbjct: 261 DMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEV 320
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+A+LTACSH+G +D+ ++F SM DY I P+ +HY + DLLGRAG+L EA FI +
Sbjct: 321 IFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQS 380
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W L ACR HKN+E+A AEK+ ++P + G+YV LSN YAA RW+D
Sbjct: 381 MPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDV 440
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M+N+G++K P S+IEV+ + ++FVAGD +H I+ L+E+ +QEGY+
Sbjct: 441 ERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYM 500
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T VLH++EEE+K++ L HSE+LA+ FG+I T G+TIRI+KNLRVCGDCH+ +K+
Sbjct: 501 PETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYA 560
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ +REII+RD RFHHF+DG CSCGDYW
Sbjct: 561 SKLSRREIILRDIKRFHHFKDGTCSCGDYW 590
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 140/343 (40%), Gaps = 60/343 (17%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH H L +N + + LI+ ++ + +F + +N++I G +N
Sbjct: 58 QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F+ + F ML I+P ++ ++ + A L + LG+ LHG +++ G + + F+
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+DMY K G + +FD+ + N ++I L+ +GV+P
Sbjct: 178 SLVDMYVKIGELGFGLQLFDE----------------SPQRNKAESILLW-----NGVRP 216
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE- 300
N + V+ L AC+ G + N ++ + G + A+ D+ + G ++ A
Sbjct: 217 NDLTVVSALLACTKIGALQVGERIHNYLSSN-GFQLNRGIGTALVDMYAKCGNIKSASRV 275
Query: 301 -------------------------------FISNMHAG--PTENVWLTLLSACRVHKNV 327
F+ AG P E ++L +L+AC NV
Sbjct: 276 FVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNV 335
Query: 328 ELAGKVAEKI---FMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+ E + + I+P M Y ++ + A R +A S
Sbjct: 336 DQGLNFFESMRLDYSIEP-TMKHYTLIVDLLGRAGRLDEALSF 377
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 322/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN VI G A+NG +AL+ +M + + PD F++ S+L + G
Sbjct: 477 MNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG 536
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG+ +R+GL+ N + SL+++Y C++ F + K+++ WN++++G QN
Sbjct: 537 KEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQN 596
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L FRQML ++P ++ +SI+ AC+ L+ L LGK++H ++N ++ F+A
Sbjct: 597 ELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVA 656
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SL+DMYAK G + ++ IF++++ ++ SW +I G +HG + A+ LFE M++ +
Sbjct: 657 CSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQ 716
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ VL AC HAGL+ + +Y M Y + P EHYA V D+LGRAG+L EA
Sbjct: 717 PDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALN 776
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI+ M P +W +LLS+ + ++E+ K AEK+ ++ N +Y++LSN YA A +
Sbjct: 777 FINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGK 836
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ ++K CSWIE++ K Y+F+AG+ S+P I + L +++ +
Sbjct: 837 WDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVE 896
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLH++EE +K+ +L HSE++AI FG + T +GTT+RI KNLR+C DCH A
Sbjct: 897 IGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNA 956
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISK +REI++RDN RFHHF+ G CSCGDYW
Sbjct: 957 AKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 168/335 (50%), Gaps = 18/335 (5%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVIKGKEI 63
+VSWN++I +R G E +++R+M ++ + T+ ++LP + +++ + +
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HGY++RH I ++ I YAKC + + +F + K SWN++I G QNG
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L F+ +M I P S S++ AC L L GK++HG ++RNG + N F+A SL
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L +Y C R F+ M + V W A++ G + + ++A+SLF QM DG++P+
Sbjct: 559 LSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618
Query: 244 VAFVAVLTACSHAGLID-----KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+A ++L ACS + ++ NS+ +D +A S A + LG + +
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQR---- 674
Query: 299 YEFISNMHAGPTENVWLTLLSACRVH----KNVEL 329
I N G W +++ VH K VEL
Sbjct: 675 ---IFNRLNGKEVASWNVMITGFGVHGQGNKAVEL 706
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 144/264 (54%), Gaps = 4/264 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +L+SWN++I G + NG + EA R + L PD T+ ++LP+ + +V
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G IHG A++ GL + + ++LI+MY+KC + ++ LF + K +SWNS+I
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390
Query: 119 QNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+ G E R+M + + ++ V+ +++PAC + L + LHG +R+ F
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
I ++ + YAKCG++ A +F M+ + SW AVI G+A +G+ A+ + +M +
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510
Query: 237 DGVKPNSVAFVAVLTACSHAGLID 260
G+ P+ + V++L AC GL+
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQ 534
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 144/254 (56%), Gaps = 5/254 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN ++ G RN LY+EA++ ++ +V +PD+FT ++ D+ GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG A++ GL ++ +G+++I +Y KC ++++ LF +P ++ ISWNS+I G +NG +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 124 DEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E + FR +L + + P + +++P C+ + +G +HG ++ G + + +
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ--MEKDGV 239
+L+DMY+KCG + A +F K++ +VSW ++I + G + L + ME++ +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412
Query: 240 KPNSVAFVAVLTAC 253
+ N V + +L AC
Sbjct: 413 EVNEVTILNLLPAC 426
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Query: 68 IRHGLDANVCIGSS----------LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
I LD +C+ S LI MY+ C +S +F L K+ WN++++G
Sbjct: 125 IGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGY 184
Query: 118 VQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
V+N L+DE + F +++ + + +P + +F ++ AC +HLGK +HG ++ G +
Sbjct: 185 VRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMD 244
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-- 234
+F+ ++++ +Y KCG + A +FDKM +++SW ++I G + +G +A F +
Sbjct: 245 LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
DG+ P+ V +L CS G +D + M G+ A+ D+ + G
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGC 363
Query: 295 LQEA 298
L EA
Sbjct: 364 LSEA 367
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 321/541 (59%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V+WN ++ G R ++++ + +M + P+S TL +L + D+ GK I+
Sbjct: 172 EVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY 231
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y ++ N+ + + LI+M+A C ++++ +F + +D ISW SI+ G G D
Sbjct: 232 KYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQID 291
Query: 125 -------------------------------EGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
E L FR+M ++ +KP + SI+ ACA
Sbjct: 292 LARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACA 351
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
HL L LG+ + I +N ++ F+ ++L+DMY KCGN+ A+ +F +M D +WTA
Sbjct: 352 HLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTA 411
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I+G A++G+ +A+++F M + + P+ + ++ VL AC+HAG+++K S+F SMT +
Sbjct: 412 MIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQH 471
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P+ HY + DLLGRAG+L+EA+E I NM P VW +LL ACRVHKNV+LA
Sbjct: 472 GIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMA 531
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A++I ++P N YV+L N YAA +RW++ +R M +G+KKTP CS +E+ Y
Sbjct: 532 AKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYE 591
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
FVAGD+SHP I L+ +++ + + GY PDT EV D+ EE K+ LY HSE+LAI
Sbjct: 592 FVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIA 651
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+ +I + G TIRI+KNLR+C DCH K +S+ RE+IVRD +RFHHF G CSC ++
Sbjct: 652 YALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNF 711
Query: 514 W 514
W
Sbjct: 712 W 712
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 42/342 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P L WNT+I G +R + +++ M N+KPD FT +L F + + G
Sbjct: 67 IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + +A++HG D+N+ + + I+M++ C V+ + ++F + + ++WN +++G +
Sbjct: 127 KVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRV 186
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + F +M + P V+ ++ AC+ L L GK ++ I + N+ +
Sbjct: 187 KQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE 246
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH--------------- 225
+ L+DM+A CG + A+ +FD M D++SWT+++ G A G
Sbjct: 247 NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYV 306
Query: 226 ----------------DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID-----KAWS 264
+A++LF +M+ VKP+ V++LTAC+H G ++ K +
Sbjct: 307 SWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYI 366
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
NS+ D + A+ D+ + G + +A + MH
Sbjct: 367 DKNSIKNDTFVG------NALIDMYFKCGNVGKAKKVFKEMH 402
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 113/229 (49%), Gaps = 2/229 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D VSW +I G R + EAL + R+M N+KPD FT+ S+L A + G
Sbjct: 300 IPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELG 359
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + Y ++ + + +G++LI+MY KC V + ++F + KD +W ++I G N
Sbjct: 360 EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAIN 419
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH-GCIIRNGFDDNMFI 179
G +E L F M+ A I P +++ ++ AC H + G+ +++G N+
Sbjct: 420 GHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTH 479
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
++D+ + G + A + M + + + W +++ +H N A
Sbjct: 480 YGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLA 528
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 16/285 (5%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVED-----SHRLFCLLPVKDAISWNSIIA 115
K+IH + I+ GL ++ +I A C E + ++F +P WN++I
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVI---AFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIK 80
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + G+ + ML + IKP +F ++ L GK L +++GFD
Sbjct: 81 GYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDS 140
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+F+ + + M++ C + LAR +FD D ++V+W ++ G + LF +ME
Sbjct: 141 NLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEME 200
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKA---WSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
K GV PNSV V +L+ACS ++ + Y N + + + D+
Sbjct: 201 KRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE----NVLIDMFAAC 256
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
G++ EA NM + W ++++ ++LA K ++I
Sbjct: 257 GEMDEAQSVFDNMKNRDVIS-WTSIVTGFANIGQIDLARKYFDQI 300
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 319/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G ++G EA+ + + M + + D T ++ + D+ G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H I+ G+ ++ + ++LI+MYAKC V DS ++F + D ++WN++I+ CV+
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F GL+ QM +++ P +F +P CA L LGK++H C++R G++ + I
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+KCG + + +F++M D+V+WT +I ++G A+ F MEK G+
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F+A++ ACSH+GL+D+ + F M Y I P EHYA V DLL R+ K+ +A E
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P ++W ++L ACR ++E A +V+ +I ++P++ G ++ SN YAA R+
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 727
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + +R +++K + K P SWIEV + F +GD S P I ++L+ L M +
Sbjct: 728 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAK 787
Query: 421 EGYVPDTKEVLHDV-EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
EGY+PD +EV ++ EEE+K+ L+ HSERLAI FG++ T GT ++++KNLRVCGDCH
Sbjct: 788 EGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHE 847
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV REI+VRD +RFH F+DG CSC D W
Sbjct: 848 VTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 190/321 (59%), Gaps = 3/321 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV DLVSWN++I G + +G YEEAL I ++ N + PDSFT+SSVLP F + + V +G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG+A++ G+++ V + + L+ MY K R D+ R+F + V+D++S+N++I G ++
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +E ++ F + L + KP ++ SS++ AC HL L L K ++ +++ GF +
Sbjct: 287 EMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D+YAKCG++ AR +F+ M+ D VSW ++I G G+ +A+ LF+ M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + ++ +++ + + ++ K GI A+ D+ + G++ ++ +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 301 FISNMHAGPTENVWLTLLSAC 321
S+M G T W T++SAC
Sbjct: 465 IFSSMGTGDTVT-WNTVISAC 484
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 135/254 (53%), Gaps = 1/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D VS+NT+I G + + EE++ + + + KPD T+SSVL D+
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I+ Y ++ G + + LI++YAKC + + +F + KD +SWNSII+G +Q+
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E +K F+ M+I + + H+++ ++ L L GK LH I++G ++ ++
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + + IF M D V+W VI G+ + + QM K V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 241 PNSVAFVAVLTACS 254
P+ F+ L C+
Sbjct: 507 PDMATFLVTLPMCA 520
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 3/319 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ WN++I ++NGL+ EAL ++ + PD +T SV+ A D G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++ + G ++++ +G++L++MY++ + + ++F +PV+D +SWNS+I+G +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + ++ + I P + SS++PA +L + G+ LHG +++G + + + +
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+ MY K AR +FD+MD+ D VS+ +I G +++ +F + D KP
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + +VL AC H + A +N M K G + D+ + G + A +
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 302 ISNMHAGPTENVWLTLLSA 320
++M T + W +++S
Sbjct: 365 FNSMECKDTVS-WNSIISG 382
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQ 119
+ IH I GLD++ LI+ Y+ S +F + P K+ WNSII +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NGLF E L+F+ ++ +K+ P +F S++ ACA L +G ++ I+ GF+ ++F+
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY++ G + AR +FD+M + D+VSW ++I G + HG +A+ ++ +++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 240 KPNSVAFVAVLTA 252
P+S +VL A
Sbjct: 204 VPDSFTVSSVLPA 216
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
VS I A + + L+ +++H +I G D + F + L+D Y+ + +F
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 202 KMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
++ ++ W ++I + +G +A+ + ++ + V P+ F +V+ AC AGL D
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFD 121
Query: 261 -KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
+ D G A+ D+ R G L A + M P ++ W +L
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM---PVRDLVSWNSL 178
Query: 318 LSACRVHKNVELAGKV 333
+S H E A ++
Sbjct: 179 ISGYSSHGYYEEALEI 194
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/507 (42%), Positives = 309/507 (60%), Gaps = 9/507 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN +I N +A+ + +M + +P+ +T +VL +D V +G ++H + +
Sbjct: 126 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 185
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+HGL + I SS I MYA R+ ++ R+ + D + + G F E L+
Sbjct: 186 KHGLGGDGHILSSAIRMYASFGRLVEARRI-----LDDKGGEVDAVCMPDRKGCFMEALE 240
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QM KI+PR S++ ACA+L L G+ +H RN + + +SL+DMYA
Sbjct: 241 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 300
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG I LA +F+KM ++ SW A+I G A+HG A DAI LF +M+ + PN + FV
Sbjct: 301 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVG 357
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL AC+H GL+ K + FNSM K+YG+ P EHY + DLLGRAG L EA + +S++
Sbjct: 358 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 417
Query: 309 PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLR 368
PT VW LL ACR H NVEL +V + + ++P N G Y +LSN YA A RW++ +R
Sbjct: 418 PTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVR 477
Query: 369 VFMRNKGMKKTPACSWIEV-KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
M+ +G+K TP S I++ + + + F+ GD SHP I + L ++ ER++ EGY PD
Sbjct: 478 KLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDP 537
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
+VL D++EE+K+ ++ HSE+LAI FG+I T GTTIRI+KNLRVC DCH+A K IS++
Sbjct: 538 SQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQV 597
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
REIIVRD R+HHF +G CSC D+W
Sbjct: 598 YNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 13/290 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K+ H +R G + I SL+ YA + E S R+F + + WN +I
Sbjct: 72 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 131
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
C++N + + + +M++A +P ++ +++ AC+ + G Q+H ++++G
Sbjct: 132 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 191
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ I SS + MYA G + AR I D D V AV M + G +A+ +F QM+
Sbjct: 192 DGHILSSAIRMYASFGRLVEARRILD--DKGGEVD--AVCMPDR-KGCFMEALEIFHQMQ 246
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
K+ ++P +VL+AC++ G +D+ + ++ K I ++ D+ + G++
Sbjct: 247 KEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI 305
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM 345
A+E M + + W ++ +H E A + K+ I+PN +
Sbjct: 306 DLAWEVFEKM-SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD-INPNEI 353
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL-----ARCIFDKMDLHDIVS 210
T+LH KQ H I+R G + +IA SL+ YA R + +FD + ++
Sbjct: 66 TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFL 125
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +I + AI L+ +M +PN + AVL ACS AG++ + +
Sbjct: 126 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 185
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
K +G+ ++ + G+L EA + +
Sbjct: 186 K-HGLGGDGHILSSAIRMYASFGRLVEARRILDD 218
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++ SWN +I GLA +G E+A+++ +M ++ P+ T VL A V KG
Sbjct: 315 MSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKG 371
Query: 61 KEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGCV 118
I + +G++ + ++++ + + ++ ++ +P + + W +++ C
Sbjct: 372 LTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACR 431
Query: 119 QNGLFDEGLKFFRQML 134
++G + G + + +L
Sbjct: 432 KHGNVELGERVGKILL 447
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 323/543 (59%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G + G ++AL + ++M + ++K T+ VL A D+ G+ +
Sbjct: 198 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVC 257
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------------- 99
Y + ++ N+ + +++++MY KC +ED+ RLF
Sbjct: 258 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 317
Query: 100 ------CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPAC 152
+P KD ++WN++I+ QNG +E L F ++ + K IK ++ S + AC
Sbjct: 318 AAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSAC 377
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A + L LG+ +H I +NG N ++ S+L+ MY+KCG++ AR +F+ ++ D+ W+
Sbjct: 378 AQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWS 437
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G A+HG +A+ +F +M++ VKPN V F V ACSH GL+D+A S F M
Sbjct: 438 AMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESS 497
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YGI P +HYA + D+LGR+G L++A +FI M P+ +VW LL AC++H N+ LA
Sbjct: 498 YGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEM 557
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
++ ++P N GA+V+LSN YA + +W + + LR MR G+KK P CS IE+ +
Sbjct: 558 ACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIH 617
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHSERLA 451
F++GD +HP ++ L E++E+++ GY P+ VL +EEE+ K+ L HSE+LA
Sbjct: 618 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLA 677
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I +G+I T IR+IKNLR+CGDCH K IS++ REIIVRD RFHHF +G+CSC
Sbjct: 678 ICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCN 737
Query: 512 DYW 514
D+W
Sbjct: 738 DFW 740
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 180/360 (50%), Gaps = 40/360 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK----PDSFTLSSVLPIFADYVD 56
+P + +WNT+I A + +I + V+ + P+ +T ++ A+
Sbjct: 91 IPQPNSFTWNTLIRAYASGP--DPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSS 148
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ G+ +HG AI+ + ++V + +SLI+ Y C ++ + ++F + KD +SWNS+I G
Sbjct: 149 LSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 208
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
VQ G D+ L+ F++M +K HV+ ++ ACA + L G+++ I N + N
Sbjct: 209 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVN 268
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL---------------- 220
+ +A+++LDMY KCG+I A+ +FD M+ D V+WT ++ G A+
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328
Query: 221 ---------------HGNAHDAISLFEQME-KDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+G ++A+ +F +++ + +K N + V+ L+AC+ G ++
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELG-R 387
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+ +S K GI +F +A+ + + G L++A E +++ VW ++ +H
Sbjct: 388 WIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDV-FVWSAMIGGLAMH 446
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D+V+WN +I +NG EAL + ++ N+K + TL S L A +
Sbjct: 326 MPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALEL 385
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IH Y ++G+ N + S+LI+MY+KC +E + +F + +D W+++I G
Sbjct: 386 GRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAM 445
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+G E + F +M A +KP V+F+++ AC+H
Sbjct: 446 HGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSH 480
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 321/550 (58%), Gaps = 36/550 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-----YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
M D++SW+ +I G A++G +E ++ +M + P+ T S+L + +
Sbjct: 341 MSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHG 400
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH------------------- 96
+ +G++IH + G +++ + +++ NMYAKC + ++
Sbjct: 401 ALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLT 460
Query: 97 ------------RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
++F + ++ +SWN +IAG Q+G + + M + +P V+
Sbjct: 461 MYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVT 520
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
SI+ AC L+ L GK +H ++ G + + +A+SL+ MY+KCG + AR +FDK+
Sbjct: 521 IISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS 580
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D V+W A++ G HG +A+ LF++M K+ V PN + F AV++AC AGL+ +
Sbjct: 581 NRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGRE 640
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
F M +D+ + P +HY + DLLGRAG+LQEA EFI M P +VW LL AC+ H
Sbjct: 641 IFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSH 700
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
NV+LA A I ++P+N YV LSN YA A RW D+ +R M +KG+KK S
Sbjct: 701 DNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESS 760
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
IE+ + + FVA D +HP I+ L+ L + M++ GY PD + VLHDV+E QK+ L
Sbjct: 761 IEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALC 820
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
+HSE+LAI +G++ TP GT IRI+KNLRVCGDCHTA KFISKI +REI+ RD +RFH+F+
Sbjct: 821 HHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFK 880
Query: 505 DGKCSCGDYW 514
+G CSCGD+W
Sbjct: 881 NGTCSCGDFW 890
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 175/326 (53%), Gaps = 11/326 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+V+W+++I A N +A + +M + N++P+ T S+L +Y + K
Sbjct: 139 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKA 198
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIH G++ +V + ++LI MY+KC + + +F + ++ +SW +II Q+
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQH 258
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E + + +ML A I P V+F S++ +C L+ G+++H I G + ++ +A
Sbjct: 259 RKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVA 318
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-----NAHDAISLFEQME 235
++L+ MY KC I+ AR FD+M D++SW+A+I G A G + + L E+M
Sbjct: 319 NALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMR 378
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++GV PN V F+++L ACS G +++ ++K G A+ ++ + G +
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK-VGFESDRSLQTAIFNMYAKCGSI 437
Query: 296 QEAYEFISNMHAGPTENV--WLTLLS 319
EA + S M +NV W +LL+
Sbjct: 438 YEAEQVFSKME---NKNVVAWASLLT 460
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 39/398 (9%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
L + G +EA+ ++ + L +S T ++ A GK +H GL +
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
+ +G+SLIN Y+K V ++F + ++D ++W+S+IA N + F +M
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A I+P ++F SI+ AC + + L +++H + +G + ++ +A++L+ MY+KCG I L
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC-- 253
A IF KM ++VSWTA+I NA H ++A L+E+M + G+ PN+V FV++L +C
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 254 --------------SHAGL-------------------IDKAWSYFNSMTKDYGIAPSFE 280
S GL I A F+ M+K I+ S
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352
Query: 281 HYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAEKI 337
L E ++ + M P + ++++L AC VH +E ++ +I
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
Query: 338 FMID-PNNMGAYVILSNTYAAARRWKDAASLRVFMRNK 374
+ ++ + N YA +A + M NK
Sbjct: 413 SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK 450
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 40/327 (12%)
Query: 134 LIAKIKPRHV-----SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
L+ IK R + ++ I+ CA L GK +H + G ++++ +SL++ Y+
Sbjct: 65 LLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYS 124
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K G++ +F +M L D+V+W+++I A + + A FE+M+ ++PN + F++
Sbjct: 125 KFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLS 184
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
+L AC++ +++KA +++ K G+ A+ + + G++ A E M
Sbjct: 185 ILKACNNYSMLEKA-REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM--- 240
Query: 309 PTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS--NTYAA---AR 359
NV W ++ A H+ + A ++ EK+ I PN + +L+ NT A R
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGR 300
Query: 360 RWKDAASLR-----VFMRNKGMKKTPACSWIEVKNKAY------------AFVAGDKSHP 402
R S R V + N + C+ I+ + + A +AG
Sbjct: 301 RIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSG 360
Query: 403 FYHRINEALKE---LLERMEQEGYVPD 426
+ + E+L E LLERM +EG P+
Sbjct: 361 YQDK--ESLDEVFQLLERMRREGVFPN 385
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/517 (40%), Positives = 321/517 (62%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D++SW ++IVGL RNG +AL + M G + S TL L A +D
Sbjct: 211 MPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYA 270
Query: 60 GKEIHGYAIRHGLDANV--CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G +IH + G + + +SL+ YA C R+ D+ ++F K+ + W +++ GC
Sbjct: 271 GIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGC 330
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
N E L+ F +M+ + P SF+S + +C L L G+ +H I+ G ++ +
Sbjct: 331 GLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAV 390
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ +SL+ MY+KCG I A C+F + ++VSW +VI+G A HG A+ LF++M ++
Sbjct: 391 YTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLRE 450
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV+ + + +L+ACS +G++ KA +F + + + EHYA + D+LGR G+++E
Sbjct: 451 GVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEE 510
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A ++M VWL LLSACRVH ++++A + A++IF ++P+ AYV+LSN YA+
Sbjct: 511 AEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYAS 570
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+RRW + A +R+ M++ G+ K P SWI +K + F++ D+SHP I E L L +
Sbjct: 571 SRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVK 630
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ + GY+PD + LHDVE EQ + +L YHSERLAI FG++ T +G+TI I+KNLRVCGDC
Sbjct: 631 LRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDC 690
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HTAI ++KIV REI+VRD+SRFHHF++G CSCGDYW
Sbjct: 691 HTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 11/259 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +SWN+VI + A+ + +M N S + ++++ F V + +
Sbjct: 120 DTISWNSVIKASIICNDFVTAVKLFDEMPQRN----SISWTTIIHGFLSTGRVNEAERF- 174
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +D +V ++++N Y RV D+ RLFC +P +D ISW SII G +NG
Sbjct: 175 -FNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSY 233
Query: 125 EGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM--FIAS 181
+ L FF+ M+ + + + + A A + + G Q+H C+ + GF + F+++
Sbjct: 234 QALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSA 293
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ YA C + A +F + ++V WTA++ G L+ +A+ +F +M + V P
Sbjct: 294 SLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVP 353
Query: 242 NSVAFVAVLTACSHAGLID 260
N +F + L +C GL D
Sbjct: 354 NESSFTSALNSC--VGLED 370
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
V + + L+ YA + ++ LF +P KD ISWNS+I + F +K F +M
Sbjct: 88 VSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEM 147
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
P+ S S L+T + + D ++ +++++ Y G +
Sbjct: 148 ------PQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRV 201
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVKPNSVAFVAVLTA 252
A +F +M D++SWT++I+G +G ++ A+ F+ M GV +S V L+A
Sbjct: 202 NDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSA 261
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/511 (39%), Positives = 328/511 (64%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V + +IVG A++GL EAL I M N +KP+ +TL+ +L + D++ G+ IH
Sbjct: 167 DVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIH 226
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL++ V +SL+ MY++C +EDS ++F L + ++W S + G VQNG +
Sbjct: 227 GLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREE 286
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ FR+M+ I P + SSI+ AC+ L L +G+Q+H ++ G D N + ++L+
Sbjct: 287 VAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALI 346
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
++Y KCGN+ AR +FD + D+V+ ++I A +G H+A+ LFE+++ G+ PN V
Sbjct: 347 NLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGV 406
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+++L AC++AGL+++ F S+ ++ I + +H+ + DLLGR+ +L+EA I
Sbjct: 407 TFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEE 466
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ P +W TLL++C++H VE+A KV KI + P + G +++L+N YA+A +W
Sbjct: 467 VR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQV 525
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++ +R+ +KK+PA SW++V + + F+AGD SHP I E L L+++++ GY
Sbjct: 526 IEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYN 585
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICT-PDGTTIRIIKNLRVCGDCHTAIKF 483
P+T+ VL D++EE+K + LYYHSE+LAI + + T TTIRI KNLRVCGDCH+ IKF
Sbjct: 586 PNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKF 645
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S + R+II RD+ RFHHF+ G CSC DYW
Sbjct: 646 VSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 164/299 (54%), Gaps = 2/299 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +V+WN++I +G +EA+ M + PD++T S++ F+ + G
Sbjct: 61 LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHG 120
Query: 61 KEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ HG A+ GL+ + + S+L++MYAK ++ D+H +F + KD + + ++I G Q
Sbjct: 121 QRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQ 180
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+GL E LK F M+ +KP + + I+ C +L L G+ +HG ++++G + +
Sbjct: 181 HGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS 240
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY++C I + +F+++D + V+WT+ ++G +G A+S+F +M + +
Sbjct: 241 QTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSI 300
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN ++L ACS +++ +++T G+ + AA+ +L G+ G + +A
Sbjct: 301 SPNPFTLSSILQACSSLAMLEVG-EQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 112/198 (56%), Gaps = 2/198 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H I+ G + +G LI+ Y KC + ++ +LF LP + ++WNS+I+ + +
Sbjct: 21 RAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISH 79
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFI 179
G E ++F+ ML+ + P +FS+I A + L + G++ HG + G + + F+
Sbjct: 80 GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFV 139
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+DMYAK +R A +F ++ D+V +TA+I+G A HG +A+ +FE M GV
Sbjct: 140 ASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGV 199
Query: 240 KPNSVAFVAVLTACSHAG 257
KPN +L C + G
Sbjct: 200 KPNEYTLACILINCGNLG 217
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+SS++ AH +L + +H +I++GF + F+ L+D Y KCG++ AR +FD++
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELP 62
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
IV+W ++I + HG + +A+ + M +GV P++ F A+ A S GLI
Sbjct: 63 SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLI 117
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 321/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G ++G EA+ + + M + + D T ++ + D+ G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFG 427
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H I+ G+ ++ + ++LI+MYAKC V DS ++F + D ++WN++I+ CV+
Sbjct: 428 KGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRF 487
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F GL+ QM K+ P +F +P CA L LGK++H C++R G++ + I
Sbjct: 488 GDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+KCG + + +F++M D+V+WT +I ++G A+ F MEK G+
Sbjct: 548 NALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIV 607
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F+A++ ACSH+GL++K + F M Y I P EHYA V DLL R+ K+ +A E
Sbjct: 608 PDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P ++W ++L ACR ++E A +V+ +I ++P++ G ++ SN YAA R+
Sbjct: 668 FIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 727
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + +R +R+K +KK P SWIE+ K + F +GD S P I+++L+ L M +
Sbjct: 728 WDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAK 787
Query: 421 EGYVPDTKEVLHDV-EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
EGY+PD++EV ++ EEE+K+ L+ HSERLAI FG++ T GT ++++KNLRVC DCH
Sbjct: 788 EGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHE 847
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV REI+VRD +RFH F+DG CSC D W
Sbjct: 848 VTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 191/322 (59%), Gaps = 5/322 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV DLVSWN++I G + +G YEEAL I ++ N + PDSFT+SSVLP FA+ + V +G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG+ ++ G+++ + + L+ MY K +R D+ R+F + V+D++++N++I G ++
Sbjct: 227 QGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKL 286
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +E +K F + L + KP ++ +S++ AC HL L L K ++ ++R GF +
Sbjct: 287 EMVEESVKMFLENL-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVK 345
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D+YAKCG++ AR +F+ M+ D VSW ++I G G+ +A+ LF+ M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + ++ +++ + + ++ K GI A+ D+ + G++ ++ +
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKS-GIYIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 301 FISNMHAGPTENV-WLTLLSAC 321
++M G + V W T++SAC
Sbjct: 465 IFNSM--GTLDTVTWNTVISAC 484
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 137/254 (53%), Gaps = 1/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D V++NT+I G + + EE++ + + + KPD T++SVL D+
Sbjct: 268 MVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTVTSVLCACGHLRDLSLA 326
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I+ Y +R G + + LI++YAKC + + +F + KD +SWNSII+G +Q+
Sbjct: 327 KYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E +K F+ M+I + + H+++ ++ L L GK LH I++G ++ ++
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVS 446
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + + IF+ M D V+W VI G+ + + QM K+ V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVV 506
Query: 241 PNSVAFVAVLTACS 254
P+ F+ L C+
Sbjct: 507 PDMATFLVTLPMCA 520
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 165/319 (51%), Gaps = 3/319 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ WN++I ++NG + +AL ++ + PD +T SV+ A D G
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++ + G ++++ +G++L++MY++ + + ++F +PV+D +SWNS+I+G +G
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + ++ + I P + SS++PA A+L + G+ LHG +++G + + +
Sbjct: 187 YYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNN 246
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
LL MY K AR +FD+M + D V++ +I G +++ +F + D KP
Sbjct: 247 GLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKP 305
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + +VL AC H + A +N M + G + D+ + G + A +
Sbjct: 306 DILTVTSVLCACGHLRDLSLAKYIYNYMLRA-GFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 302 ISNMHAGPTENVWLTLLSA 320
++M T + W +++S
Sbjct: 365 FNSMECKDTVS-WNSIISG 382
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQ 119
+ IH I GLD + LI+ Y+ S +F + P K+ WNSII +
Sbjct: 24 RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSK 83
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG F + L+F+ ++ +K+ P +F S++ ACA L +G ++ I+ GF+ ++++
Sbjct: 84 NGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYV 143
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY++ G + AR +FD+M + D+VSW ++I G + HG +A+ ++ ++ +
Sbjct: 144 GNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWI 203
Query: 240 KPNSVAFVAVLTA 252
P+S +VL A
Sbjct: 204 VPDSFTVSSVLPA 216
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
VS + I A + + L+ +++H +I G D + F + L+D Y+ + +F
Sbjct: 4 RVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFR 63
Query: 202 KMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
++ ++ W ++I + +G A+ + ++ + V P+ F +V+ AC AGL D
Sbjct: 64 RVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFD 121
Query: 261 -KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
+ + G A+ D+ R G L A + M P ++ W +L
Sbjct: 122 AEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEM---PVRDLVSWNSL 178
Query: 318 LSACRVHKNVELAGKV 333
+S H E A ++
Sbjct: 179 ISGYSSHGYYEEALEI 194
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 322/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN VI G A+NG +AL+ +M + + PD F++ S+L + G
Sbjct: 477 MNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG 536
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG+ +R+GL+ N + SL+++Y C++ F + K+++ WN++++G QN
Sbjct: 537 KEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQN 596
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E L FRQML ++P ++ +SI+ AC+ L+ L LGK++H ++N ++ F+A
Sbjct: 597 ELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVA 656
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SL+DMYAK G + ++ IF++++ ++ SW +I G +HG + A+ LFE M++ +
Sbjct: 657 CSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQ 716
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ VL AC HAGL+ + +Y M Y + P EHYA V D+LGRAG+L EA
Sbjct: 717 PDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALN 776
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI+ M P +W +LLS+ + ++E+ K AEK+ ++ N +Y++LSN YA A +
Sbjct: 777 FINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGK 836
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R M++ ++K CSWIE++ K Y+F+AG+ S+P I + L +++ +
Sbjct: 837 WDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVE 896
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLH++EE +K+ +L HSE++AI FG + T +GTT+RI KNLR+C DCH A
Sbjct: 897 IGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNA 956
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ISK +REI++RDN RFHHF+ G CSCGDYW
Sbjct: 957 AKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 169/335 (50%), Gaps = 18/335 (5%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVIKGKEI 63
+VSWN++I +R G E +++R+M ++ + T+ ++LP + +++ + +
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HGY++RH I ++ I YAKC + + +F + K SWN++I G QNG
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L F+ +M I P S S++ AC L L GK++HG ++RNG + N F+A SL
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L +Y C R F++M + V W A++ G + + ++A+SLF QM DG++P+
Sbjct: 559 LSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618
Query: 244 VAFVAVLTACSHAGLID-----KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+A ++L ACS + ++ NS+ +D +A S A + LG + +
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQR---- 674
Query: 299 YEFISNMHAGPTENVWLTLLSACRVH----KNVEL 329
I N G W +++ VH K VEL
Sbjct: 675 ---IFNRLNGKEVASWNVMITGFGVHGQGNKAVEL 706
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 144/264 (54%), Gaps = 4/264 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +L+SWN++I G + NG + EA R + L PD T+ ++LP+ + +V
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G IHG A++ GL + + ++LI+MY+KC + ++ LF + K +SWNS+I
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390
Query: 119 QNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+ G E R+M + + ++ V+ +++PAC + L + LHG +R+ F
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
I ++ + YAKCG++ A +F M+ + SW AVI G+A +G+ A+ + +M +
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510
Query: 237 DGVKPNSVAFVAVLTACSHAGLID 260
G+ P+ + V++L AC GL+
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQ 534
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 144/254 (56%), Gaps = 5/254 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN ++ G RN LY+EA++ ++ +V +PD+FT ++ D+ GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG A++ GL ++ +G+++I +Y KC ++++ LF +P ++ ISWNS+I G +NG +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 124 DEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E + FR +L + + P + +++P C+ + +G +HG ++ G + + +
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ--MEKDGV 239
+L+DMY+KCG + A +F K++ +VSW ++I + G + L + ME++ +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412
Query: 240 KPNSVAFVAVLTAC 253
+ N V + +L AC
Sbjct: 413 EVNEVTILNLLPAC 426
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Query: 68 IRHGLDANVCIGSS----------LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
I LD +C+ S LI MY+ C +S +F L K+ WN++++G
Sbjct: 125 IGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGY 184
Query: 118 VQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
V+N L+DE + F +++ + + +P + +F ++ AC +HLGK +HG ++ G +
Sbjct: 185 VRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMD 244
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-- 234
+F+ ++++ +Y KCG + A +FDKM +++SW ++I G + +G +A F +
Sbjct: 245 LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
DG+ P+ V +L CS G +D + M G+ A+ D+ + G
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGC 363
Query: 295 LQEA 298
L EA
Sbjct: 364 LSEA 367
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 314/515 (60%), Gaps = 3/515 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D+ SWNT++ GL R+G EAL ++QM + ++T S V + G++
Sbjct: 220 LRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQ 279
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGCVQ 119
+HG + L+ + +G SL++MY KC +E + +F +W++++AG VQ
Sbjct: 280 LHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQ 339
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +E L+FFR+ML + +S+ ACA+ + G+Q+HG + + G + +
Sbjct: 340 NGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPL 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+++DMY+K G++ A IF ++ WT ++ A HG A+ +F +M+ + +
Sbjct: 400 ASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKI 459
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN + VAVL+ACSH+GL+ + YFN M ++YGI P+ EHY + DL GRAG L +A
Sbjct: 460 MPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAK 519
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI VW TLLSACR+HK++E A +EK+ ++ + G+YV++SN YA
Sbjct: 520 NFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNN 579
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W D LR M+ + ++K P SWI +KN + FVA D SHP I L++L+ER++
Sbjct: 580 KWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLK 639
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY T V+HD+EEEQ++ L +HSE+LAI FGII TP GT +RI KNLRVC DCH
Sbjct: 640 EMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHE 699
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFI++ REI+VRD RFHHF+DG+CSC D+W
Sbjct: 700 AIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 50/394 (12%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV--NLKPDSFTLSSVLPIFADYVDVIK 59
P L +W ++I G AR G + + + +M + P++F L+ VL A DV
Sbjct: 85 PTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVES 144
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG+ +R G+ +V + +++++MYAKC + R F + KDA SWN +I C+Q
Sbjct: 145 GRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQ 204
Query: 120 NG-------LFDE------------------------GLKFFRQMLIAKIKPRHVSFSSI 148
+G LFDE L +QM+ A + + ++S +
Sbjct: 205 DGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMV 264
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK-MDLHD 207
L++ LG+QLHG ++ +++ F+ SL+DMY KCG + A IFD+ D +
Sbjct: 265 FALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTE 324
Query: 208 --IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+W+ ++ G +G +A+ F +M ++GV +V +AC++AG++++
Sbjct: 325 DRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQG-RQ 383
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRV 323
+ + G +A+ D+ ++G L++A + T+NV W T+L +
Sbjct: 384 VHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIF---RSAQTKNVALWTTMLCSYAS 440
Query: 324 HKNVELAGKV-----AEKIFMIDPNNMGAYVILS 352
H +A ++ AEKI PN + +LS
Sbjct: 441 HGQGRMALEIFSRMKAEKIM---PNEITLVAVLS 471
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 46/258 (17%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
V L P +F S + + K IH ++R + ++ I L N
Sbjct: 27 VLLSPQTFIFHSSARLLPEAGACAAKKAIHRQSVRGCVPSSSVIARGLHN---------- 76
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML--IAKIKPRHVSFSSIMPAC 152
+HR+F P + +W SII+GC + G +G++ F +ML P + ++ C
Sbjct: 77 AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG--------------------N 192
A L + G+++HG I+R+G ++ + +++LDMYAKCG N
Sbjct: 137 AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196
Query: 193 IRLARC-----------IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
I + C +FD+ L D+ SW ++ G HG+ +A+ +QM + GV
Sbjct: 197 IVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTF 256
Query: 242 NSVAFVAVLTACSHAGLI 259
++ + V AGL+
Sbjct: 257 SNYTYSMVFAL---AGLL 271
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/510 (41%), Positives = 310/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW +I G A++ + EALN+ ++M + + D+ +S + A + +G++IH
Sbjct: 538 DVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIH 597
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A G ++ +G++L+++YA+C +V D++ F + KD ISWNS+I+G Q+G +
Sbjct: 598 AQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCE 657
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F QM A + +F + A A++ + LGKQ+H II+ G D +++ L+
Sbjct: 658 EALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLI 717
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+YAKCGNI A F +M + +SW A++ G + HG+ A+SLFE M++ GV PN V
Sbjct: 718 TLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHV 777
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL+ACSH GL+D+ YF SM + +G+ P EHYA V DLLGR+G L A F+
Sbjct: 778 TFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEE 837
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P V TLLSAC VHKN+++ A + ++P + YV+LSN YA +W
Sbjct: 838 MPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCR 897
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+++G+KK P SWIEV N +AF AGD+ HP +I E L++L E + GY+
Sbjct: 898 DRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYI 957
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P T +L+D E QK HSE+LAI FG++ T I + KNLRVCGDCH IK++
Sbjct: 958 PQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYV 1017
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI R I+VRD+ RFHHF+ G CSC DYW
Sbjct: 1018 SKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 175/302 (57%), Gaps = 7/302 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VS+N++I GL++ G ++AL + ++M LKPD T++S+L + ++ G
Sbjct: 332 MLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG 391
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+ H YAI+ G+ +++ + +L+++Y KC+ ++ +H F ++ + WN ++ V
Sbjct: 392 KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVML---VAY 448
Query: 121 GLFD---EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
GL D E K F QM + I+P ++ SI+ C+ L + LG+Q+H +++ GF N+
Sbjct: 449 GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV 508
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+++S L+DMYAK G + A IF ++ D+VSWTA+I G A H +A++LF++M+
Sbjct: 509 YVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQ 568
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ +++ F + ++AC+ +++ ++ G + A+ L R GK+++
Sbjct: 569 GIHSDNIGFASAISACAGIQALNQG-QQIHAQACVSGYSDDLSVGNALVSLYARCGKVRD 627
Query: 298 AY 299
AY
Sbjct: 628 AY 629
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 137/242 (56%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V WN ++V E+ I QM ++P+ FT S+L + V G++IH
Sbjct: 437 NVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH 496
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G NV + S LI+MYAK +++ + ++F L KD +SW ++IAG Q+ F
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F++M I ++ F+S + ACA + L+ G+Q+H +G+ D++ + ++L+
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+YA+CG +R A FDK+ D +SW ++I G A G+ +A+SLF QM K G + NS
Sbjct: 617 SLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSF 676
Query: 245 AF 246
F
Sbjct: 677 TF 678
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW ++ GL+++G EEA+ + QM + P + SSVL G+++H
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLH 294
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G + ++L+ +Y++ + ++F + +D +S+NS+I+G Q G D
Sbjct: 295 GLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSD 354
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ F++M + +KP V+ +S++ AC+ + L +GKQ H I+ G ++ + +LL
Sbjct: 355 KALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALL 414
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y KC +I+ A F + ++V W +++ L N +++ +F QM+ +G++PN
Sbjct: 415 DLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQF 474
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+ ++L CS +D + K G + + + D+ + GKL A +
Sbjct: 475 TYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIFRR 533
Query: 305 M 305
+
Sbjct: 534 L 534
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 183/358 (51%), Gaps = 13/358 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIK 59
MPV L WN V+ + L + R+M +KPD T + VL V
Sbjct: 129 MPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHC 188
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH I HG + ++ + + LI++Y K + + ++F L +D++SW ++++G Q
Sbjct: 189 VEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQ 248
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E + F QM + + P FSS++ AC + +G+QLHG +++ GF ++
Sbjct: 249 SGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV 308
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ +Y++ GN A +F+ M D VS+ ++I G + G + A+ LF++M D +
Sbjct: 309 CNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368
Query: 240 KPNSVAFVAVLTACSHAG--LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
KP+ V ++L+ACS G L+ K F+S G++ A+ DL + ++
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQ---FHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 298 AYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
A+EF + TENV W +L A + N+ + K+ ++ M I+PN IL
Sbjct: 426 AHEFFLSTE---TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++HG ++ G A V + L+++Y ++ + +F +PV+ WN ++ V
Sbjct: 87 GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMF 178
+ L FR+ML K+KP +++ ++ C H +++H I +G+++++F
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLF 206
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+D+Y K G + A+ +FD + D VSW A++ G + G +A+ LF QM G
Sbjct: 207 VCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSG 266
Query: 239 VKPNSVAFVAVLTACS 254
V P F +VL+AC+
Sbjct: 267 VYPTPYIFSSVLSACT 282
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 34/230 (14%)
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
G+ F M ++ ++ ++ C G +LHG I++ GF + + L+D
Sbjct: 52 GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
+Y G++ A +FD+M + + W V+ A + LF +M ++ VKP+
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171
Query: 246 FVAVLTACS------------HAGLIDKAW-----------------SYFNSMTKDYGIA 276
+ VL C HA I + + NS K +
Sbjct: 172 YAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGL 231
Query: 277 PSFEHYAAVADL--LGRAGKLQEAYEFISNMHAG---PTENVWLTLLSAC 321
+ + VA L L ++G +EA MH PT ++ ++LSAC
Sbjct: 232 QKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSAC 281
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 319/517 (61%), Gaps = 17/517 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK--- 61
++V+W +I G +N ++A+++ QM ++P+ FT S+VL GK
Sbjct: 372 NVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA----------GKPSS 421
Query: 62 ---EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++H I+ + + ++L++ Y K V +S R+F +P KD ++W++++ G
Sbjct: 422 LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLA 481
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNM 177
Q ++ ++ F Q++ +KP +FSS++ AC+ T+ GKQ+H +++G + +
Sbjct: 482 QTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNAL 541
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++S+LL MY+K GNI A +F + + DIVSW ++I G HG+A A+ +F+ M+
Sbjct: 542 CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ + V F+ VLTAC+HAGL+++ YFN M KDY I EHY+ + DL RAG +
Sbjct: 602 GLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDK 661
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + I+ M + +W TLL+ACRVH+N+EL AEK+ + PN+ YV+LSN +A
Sbjct: 662 AMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAV 721
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A W++ A +R M + +KK CSWIE+KN+ ++F+AGD SHPF + L+EL +
Sbjct: 722 AGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIK 781
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GY PDT V HDVEEE K+ +L HSERLAI +G+I P G I+I KNLR+CGDC
Sbjct: 782 LKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDC 841
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H I+ IS I +R +IVRD++RFHHF+ G CSCG YW
Sbjct: 842 HNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 144/253 (56%), Gaps = 1/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + ++VSW +++ G ARNGL +E ++++ QM + P+ FT ++VL AD + G
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +++G + + ++LI MY K V D+ +F + V+D+++WN +I G
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + EG + F +M +A +K F + + C+ L+ KQLH +++NG++ I
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+KC ++ A +F D H++V+WTA+I G + N A+ LF QM ++GV
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGV 404
Query: 240 KPNSVAFVAVLTA 252
+PN + VL
Sbjct: 405 RPNHFTYSTVLAG 417
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 136/254 (53%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P+ D+ +N ++ +RN EAL++ + + + L D TLS L + D + G+
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H +++ G +V +G+SL++MY K ED +F + +K+ +SW S+++G +NG
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L DE + QM + + P +F++++ A A + + G Q+H I++NGF+ F+ +
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MY K + A +FD M + D V+W +I G A G + +F +M GVK
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304
Query: 242 NSVAFVAVLTACSH 255
+ F L CS
Sbjct: 305 SRTVFCTALKLCSQ 318
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
+P D+V+W+ ++ GLA+ E+A+ + Q+ +KP+ +T SSV+ + ++
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+IH A++ G +C+ S+L+ MY+K +E + ++F +D +SWNS+I G Q
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G + L+ F+ M + V+F ++ AC H + G++ +I++ D
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXE 644
Query: 179 IASSLLDMYAKCGNIRLARCIFDKM 203
S ++D+Y++ G A I + M
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGM 669
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 93/171 (54%)
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+R +H+LF P+KD +N ++ +N E L F+ + + + ++ S +
Sbjct: 52 SRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCAL 111
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
C L +G+Q+H +++GF +++ + +SL+DMY K + R IFD+M + ++V
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
SWT+++ G A +G + I L QM+ +GV PN F VL A + +I+
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIE 222
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/480 (43%), Positives = 305/480 (63%), Gaps = 5/480 (1%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD+ T ++ A + + +G+ +H A ++G V + +SL+++Y C E +H++
Sbjct: 114 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 173
Query: 99 FCLLPVK--DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
F +PV+ + +SWNS++ NG +E L F +ML P + S++ ACA
Sbjct: 174 FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG 233
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVI 215
L LG+++H + + G +N ++++L+D+YAKCG++ AR IF++M L +VSWT++I
Sbjct: 234 ALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 293
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+G A +G +A+ LF ME++ + P + V VL ACSH GL+D + YF+ M +DYGI
Sbjct: 294 VGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGI 353
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA- 334
+P EH + DLLGRAG+++EAY++I M P VW TLL +C +HK +EL GKVA
Sbjct: 354 SPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL-GKVAW 412
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
E++ +DP + G YV+LSN YAA W D LR M ++K P S +E++N Y F
Sbjct: 413 ERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEF 472
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
V GD+SHP +I E L E+ ER+ +EGY+P T VL D+EEE+K+ L YHSERLAI F
Sbjct: 473 VMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAF 532
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ + G IRIIKNLR+CGDCH A ISK+ REIIVRD SRFHHF+ G CSC DYW
Sbjct: 533 ALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 592
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 1 MPVS--DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV +LVSWN+++ A NG E L + +M V+ PD FT+ SVL A++ +
Sbjct: 177 MPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALA 236
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGC 117
G+ +H Y + GL N + ++LI++YAKC V D+ R+F + + + +SW S+I G
Sbjct: 237 LGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGL 296
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDN 176
NG E L+ F M K+ P ++ ++ AC+H + G + + + G
Sbjct: 297 AANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPR 356
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
+ ++D+ + G + A M L + V W ++ A+H
Sbjct: 357 IEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 402
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 319/519 (61%), Gaps = 6/519 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYE-EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P D +NT+I A+ + AL M + P+ FT VL A + + G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS-----HRLFCLLPVKDAISWNSIIA 115
+H ++ G + + + ++L++MY C + S ++F PVKD+++W+++I
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIG 306
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + G + FR+M + + P ++ S++ ACA L L LGK L I R
Sbjct: 307 GYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMR 366
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ + ++L+DM+AKCG++ A +F +M + IVSWT++I+G A+HG +A+ +F++M
Sbjct: 367 SVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMM 426
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ GV P+ VAF+ VL+ACSH+GL+DK YFN+M + I P EHY + D+L RAG++
Sbjct: 427 EQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRV 486
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EA EF+ M P + +W ++++AC ++L VA+++ +P++ YV+LSN Y
Sbjct: 487 NEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIY 546
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A RW+ +R M KGM+K P + IE+ N+ Y FVAGDKSH Y I E ++E+
Sbjct: 547 AKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMG 606
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+++ GYVP T +VL D++EE K++ LY HSE+LAI F ++ TP GT IRI+KNLRVC
Sbjct: 607 REIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCE 666
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH+A KFISK+ REI+VRD +RFHHF++G CSCGD+W
Sbjct: 667 DCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 41/259 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V +VSW ++IVGLA +G EA+ + +M + PD VL + V KG
Sbjct: 394 MKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKG 453
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
H Y +++ NM++ ++E + ++ +
Sbjct: 454 ---HYYF------------NTMENMFSIVPKIE---------------HYGCMVDMLSRA 483
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMF 178
G +E L+F R M ++P V + SI+ AC L LG+ + +IR + N
Sbjct: 484 GRVNEALEFVRAM---PVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYV 540
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH-----GNAHDAI-SLFE 232
+ S++ + R + D + I T + M N ++ +HD ++E
Sbjct: 541 LLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYE 600
Query: 233 QMEKDGVKPNSVAFVAVLT 251
+E+ G + +V +
Sbjct: 601 MVEEMGREIKRAGYVPTTS 619
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 317/511 (62%), Gaps = 1/511 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MP D V+WN +I G A N EA+ + + + + T+ SVL + D++K
Sbjct: 560 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 619
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G IH + + G +++ + +SLI MYAKC + S+ +F L K I+WN+++A
Sbjct: 620 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 679
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E LK F +M + SFS + A A+L L G+QLHG +I+ GF+ ++ +
Sbjct: 680 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 739
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++ +DMY KCG + + + +SW +I A HG A F +M K G
Sbjct: 740 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V FV++L+AC+H GL+D+ +Y++SMT+++G+ P EH + DLLGR+G+L A
Sbjct: 800 KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAE 859
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI M P + W +LL+ACR+H N+ELA K AE + +DP++ AYV+ SN A +
Sbjct: 860 GFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSG 919
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D +LR M + +KK PACSW+++K+K ++F G+K HP RI+ L EL++ +
Sbjct: 920 KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 979
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPDT LHD++EEQK+ L+ HSERLA+ FG+I TP+ +T+RI KNLRVCGDCH+
Sbjct: 980 EAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHS 1039
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
KF+S IV R+I++RD RFHHF GKCSC
Sbjct: 1040 VYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 148/250 (59%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D++SWN +I A +GL E+L M +++ + +S TLSS+L + + ++ G+ IH
Sbjct: 362 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIH 421
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GLD+NVCI ++L+ +Y++ R ED+ +F + +D ISWNS++A VQ+G
Sbjct: 422 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 481
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+GLK ++L HV+F+S + AC++ L K +H II GF D + + ++L+
Sbjct: 482 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 541
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY K G + A+ + M D V+W A+I G+A + ++A+ ++ + + G+ N +
Sbjct: 542 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 601
Query: 245 AFVAVLTACS 254
V+VL ACS
Sbjct: 602 TMVSVLGACS 611
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 167/343 (48%), Gaps = 3/343 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SWN+++ ++G + L I+ ++ + + T +S L ++ +I+
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H I G + +G++L+ MY K + ++ ++ +P D ++WN++I G +N
Sbjct: 519 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAEN 578
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E +K ++ + I +++ S++ AC A L G +H I+ GF+ + ++
Sbjct: 579 EEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYV 638
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MYAKCG++ + IFD + ++W A++ NA HG +A+ +F +M GV
Sbjct: 639 KNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGV 698
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ +F L A ++ ++++ + + G A D+ G+ G++ +
Sbjct: 699 NLDQFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVL 757
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP 342
+ + + W L+SA H + A + ++ + P
Sbjct: 758 KMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 135/244 (55%), Gaps = 11/244 (4%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFADYVDVIKGK 61
SW+T++ G R GLYEEA+ + QM + ++P+ F ++S++ AD +G
Sbjct: 162 SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD-----EGF 216
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++HG+ ++ G+ +V +G++L++ Y V ++ +LF +P + +SW S++ G +G
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E L +++M + +F+++ +C L LG Q+ G II+ GF+D++ +A+
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 336
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ M++ ++ A +FD M+ DI+SW A+I A HG +++ F M +
Sbjct: 337 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 396
Query: 242 NSVA 245
NS
Sbjct: 397 NSTT 400
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 160/324 (49%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++VG + +G E LN+ ++M + + T ++V D + G
Sbjct: 257 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 316
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ G+ I++G + +V + +SLI+M++ + VE++ +F + D ISWN++I+ +
Sbjct: 317 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 376
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L+ F M + + SS++ C+ + L G+ +HG +++ G D N+ I
Sbjct: 377 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 436
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL +Y++ G A +F M D++SW +++ G D + + ++ + G
Sbjct: 437 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 496
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKLQ 296
N V F + L ACS+ + ++ + I F + V + L G+ G +
Sbjct: 497 MNHVTFASALAACSNPECLIES-----KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM 551
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
EA + + M P W L+
Sbjct: 552 EAKKVLQTM-PQPDRVTWNALIGG 574
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 48 LPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA 107
L F++ + GK +H + I ++ + ++LINMY+K +E + +F + ++
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160
Query: 108 ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-HLGKQLHG 166
SW+++++G V+ GL++E + F QM ++P +S++ AC+ + G Q+HG
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
+++ G ++++ ++L+ Y G + A+ +F++M H++VSWT++++G + GN +
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTAC 253
++++++M ++GV N F V ++C
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSC 307
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ +T+ GK LH I + +F ++L++MY+K GNI AR +FD+M + SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ G G +A+ LF QM GV+PN +++TACS +G + +
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
GI A+ G G + A + M P NV W +L+
Sbjct: 225 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM---PDHNVVSWTSLM 269
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 307/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW T+I G + ++AL RQM + ++ D L++ + A + +G++IH
Sbjct: 515 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 574
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A G +++ ++L+ +Y++C ++E+S+ F D I+WN++++G Q+G +
Sbjct: 575 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 634
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F +M I + +F S + A + + GKQ+H I + G+D + ++L+
Sbjct: 635 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 694
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I A F ++ + VSW A+I + HG +A+ F+QM V+PN V
Sbjct: 695 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 754
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V VL+ACSH GL+DK +YF SM +YG++P EHY V D+L RAG L A EFI
Sbjct: 755 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 814
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLLSAC VHKN+E+ A + ++P + YV+LSN YA +++W
Sbjct: 815 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDAR 874
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ KG+KK P SWIEVKN ++F GD++HP I+E ++L +R + GYV
Sbjct: 875 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 934
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D +L++++ EQK +++ HSE+LAI FG++ P I ++KNLRVC DCH IKF+
Sbjct: 935 QDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFV 994
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REIIVRD RFHHFE G CSC DYW
Sbjct: 995 SKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 167/325 (51%), Gaps = 11/325 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF---ADYVDV 57
MP + +WN +I LA L E + +M + N+ P+ T S VL + DV
Sbjct: 106 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 165
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
++ +IH + GL + + + LI++Y++ V+ + R+F L +KD SW ++I+G
Sbjct: 166 VE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 223
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+N E ++ F M + I P +FSS++ AC + +L +G+QLHG +++ GF +
Sbjct: 224 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 283
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++ ++L+ +Y GN+ A IF M D V++ +I G + G A+ LF++M D
Sbjct: 284 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 343
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+S +++ ACS G + + ++ T G A + + A+ +L + ++
Sbjct: 344 GLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 402
Query: 298 AYEFISNMHAGPTENV--WLTLLSA 320
A ++ ENV W +L A
Sbjct: 403 ALDYFLETE---VENVVLWNVMLVA 424
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++V WN ++V + I RQM + P+ +T S+L D+ G++
Sbjct: 412 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 471
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH I+ N + S LI+MYAK +++ + + KD +SW ++IAG Q
Sbjct: 472 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 531
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D+ L FRQML I+ V ++ + ACA L L G+Q+H +GF ++ ++
Sbjct: 532 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 591
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +Y++CG I + F++ + D ++W A++ G GN +A+ +F +M ++G+ N
Sbjct: 592 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 651
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ F + + A S + + +TK G E A+ + + G + +A
Sbjct: 652 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA 706
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 164/324 (50%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + D SW +I GL++N EA+ + M + + P + SSVL + G
Sbjct: 208 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 267
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ G ++ + ++L+++Y + + +F + +DA+++N++I G Q
Sbjct: 268 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 327
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ ++ F++M + ++P + +S++ AC+ TL G+QLH + GF N I
Sbjct: 328 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 387
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LL++YAKC +I A F + ++ ++V W +++ L + ++ +F QM+ + +
Sbjct: 388 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 447
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQ 296
PN + ++L C G ++ + + K +F+ A V D+ + GKL
Sbjct: 448 PNQYTYPSILKTCIRLGDLELGEQIHSQIIK-----TNFQLNAYVCSVLIDMYAKLGKLD 502
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
A++ + AG W T+++
Sbjct: 503 TAWDILIRF-AGKDVVSWTTMIAG 525
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 5/296 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H ++ GLD+N C+ L + Y + + ++F +P + +WN +I
Sbjct: 63 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 122
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNM 177
L E F +M+ + P +FS ++ AC + +Q+H I+ G D+
Sbjct: 123 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 182
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ + L+D+Y++ G + LAR +FD + L D SW A+I G + + +AI LF M
Sbjct: 183 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 242
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ P AF +VL+AC ++ + + G + A+ L G L
Sbjct: 243 GIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 301
Query: 298 AYEFISNMHA--GPTENVWLTLLSACRV-HKNVELAGKVAEKIFMIDPNNMGAYVI 350
A SNM T N + LS C K +EL ++ D N + + V+
Sbjct: 302 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 357
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 138 IKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
I+P H + ++ C +L G++LH I++ G D N ++ L D Y G++ A
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+FD+M I +W +I A + LF +M + V PN F VL AC
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 156
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 312/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+ WN +I G + G ++EA +I + L + TL++VL A
Sbjct: 271 MSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASAT 330
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A + G + + + LI+ Y KC+ + D+ R+F D I+ S+I Q
Sbjct: 331 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQC 390
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +K F +ML ++P SS++ ACA L+ GKQ+H +I+ F + F
Sbjct: 391 DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG 450
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAKCG+I A F + +VSW+A+I G A HG+ A+ LF +M +G+
Sbjct: 451 NALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 510
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +VL AC+HAGL+D+A YFNSM + +GI + EHY+ + DLLGRAGKL +A E
Sbjct: 511 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 570
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M +VW LL A RVHK+ EL AEK+F+++P G +V+L+NTYA++
Sbjct: 571 LVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGM 630
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R M++ +KK PA SW+EVK+K + F+ GDKSHP I L EL + M +
Sbjct: 631 WNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSK 690
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P+ LHD++ +K+ LL +HSERLA+ F ++ TP G IR+ KNLR+C DCH A
Sbjct: 691 AGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMA 750
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFIS IV REII+RD +RFHHF DG CSCGDYW
Sbjct: 751 FKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSWN ++ +N +A+ + +M ++P F S V+ ++ G+++H
Sbjct: 75 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAM 134
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R G + +V ++L++MY K RV+ + +F +P D +SWN++I+GCV NG
Sbjct: 135 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 194
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ QM + + P SSI+ ACA LG+Q+HG +I+ D + +I L+DM
Sbjct: 195 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 254
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKDGVKPNSVA 245
YAK + A +FD M D++ W A+I G + HG HD A S+F + K+G+ N
Sbjct: 255 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCS-HGGRHDEAFSIFYGLRKEGLGVNRTT 313
Query: 246 FVAVLTACS 254
AVL + +
Sbjct: 314 LAAVLKSTA 322
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 125/215 (58%), Gaps = 2/215 (0%)
Query: 48 LPIFADYV-DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVK 105
LP+ V D G ++H A+ G ++V + ++L+ MY ++D+ R+F +
Sbjct: 13 LPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSER 72
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+A+SWN +++ V+N + ++ F +M+ + I+P FS ++ AC + G+Q+H
Sbjct: 73 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 132
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
++R G++ ++F A++L+DMY K G + +A IF+KM D+VSW A+I G L+G+ H
Sbjct: 133 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 192
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
AI L QM+ G+ PN ++L AC+ AG D
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 227
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 177/357 (49%), Gaps = 12/357 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP SD+VSWN +I G NG A+ ++ QM + L P+ F LSS+L A G
Sbjct: 170 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG+ I+ D++ IG L++MYAK ++D+ ++F + +D I WN++I+GC
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 289
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE F + + + ++++ + A L +Q+H + GF + +
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 349
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D Y KC + A +F++ DI++ T++I + + AI LF +M + G++
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ ++L AC+ ++ + K ++ +F A V + G +++A
Sbjct: 410 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY-TYAKCGSIEDAEL 468
Query: 301 FISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYVIL 351
S++ P V W ++ H + +EL G++ ++ I+PN++ +L
Sbjct: 469 AFSSL---PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE--GINPNHITMTSVL 520
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/510 (41%), Positives = 309/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW+ +I GLA+NG+ +EA+ R+M LK D + SVLP + G++IH
Sbjct: 231 DSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIH 290
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR L ++ +GS+LI+MY KC + + +F + K+ +SW +++ G Q G
Sbjct: 291 ACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAG 350
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E +K F M + I P H + + ACA++++L G Q HG I G + +++SL+
Sbjct: 351 EAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLV 410
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I + +F++M++ D VSWTA++ A G A +AI LF++M + G+KP+ V
Sbjct: 411 TLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGV 470
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V++ACS AGL++K YF M +YGI PS HY+ + DL R+G+++EA FI+
Sbjct: 471 TLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFING 530
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLSACR N+E+ AE + +DP++ Y +LS+ YA+ +W
Sbjct: 531 MPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCV 590
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR M+ K ++K P SWI+ K K ++F A D+S P+ +I L+EL +++ GY
Sbjct: 591 AQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYK 650
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT V HDVEE K +L HSERLAI FG+I P G IR+ KNLRVC DCH A K I
Sbjct: 651 PDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHI 710
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REI+VRD RFH F+DG CSCGD+W
Sbjct: 711 SSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 181/356 (50%), Gaps = 43/356 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D V+WN +I G + +GL A+ M + + TL ++L + + V
Sbjct: 95 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSL 154
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
GK+IHG I+ G ++ + +GS L++MY+K
Sbjct: 155 GKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLA 214
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +ED+ +LF + KD++SW+++I G QNG+ E ++ FR+M I +K F S+
Sbjct: 215 CGMIEDALQLFRGME-KDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSV 273
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PAC L ++ G+Q+H CIIR D++++ S+L+DMY KC + A+ +FD+M ++
Sbjct: 274 LPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 333
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSWTA+++G G A +A+ +F M++ G+ P+ ++AC++ +++ +
Sbjct: 334 VSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGK 393
Query: 269 MTKDYGIAPSFEHYAAVAD----LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
I HY V++ L G+ G + ++ + M+ E W ++SA
Sbjct: 394 -----AITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDEVSWTAMVSA 443
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 14/231 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++VG + G EA+ I M + PD +TL + A+ + +G
Sbjct: 328 MKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEG 387
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ HG AI GL + + +SL+ +Y KC ++DS RLF + V+D +SW ++++ Q
Sbjct: 388 SQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQF 447
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL-------HGCIIRNGF 173
G E ++ F +M+ +KP V+ + ++ AC+ + G++ +G + NG
Sbjct: 448 GRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGH 507
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
S ++D++++ G I A + M D + WT ++ GN
Sbjct: 508 ------YSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGN 552
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 41/266 (15%)
Query: 27 NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL-DANVCIGSSLINM 85
NI+R + + P++F ++++ +A +I+ I+ + G+ N+ ++L+
Sbjct: 28 NIIRTLPH----PETFLHNNIVHAYA----LIR-SSIYARRVFDGIPQPNLFSWNNLLLA 78
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVS 144
Y+K + + R F LP +D ++WN +I G +GL +K + M+ V+
Sbjct: 79 YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVT 138
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+++ + + LGKQ+HG +I+ GF+ + + S LLDMY+K G I A+ +F +D
Sbjct: 139 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLD 198
Query: 205 ------------------------------LHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
D VSW+A+I G A +G +AI F +M
Sbjct: 199 DRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREM 258
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLID 260
+ +G+K + F +VL AC G I+
Sbjct: 259 KIEGLKMDQYPFGSVLPACGGLGAIN 284
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+S+ + C L K +HG IIR F+ ++++ YA + AR +FD +
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++ SW +++ + G+ + FE++ ++DGV N ++ S +GL+ A
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWN-----VLIEGYSLSGLVGAAV 120
Query: 264 SYFNSMTKDY 273
+N+M KD+
Sbjct: 121 KAYNTMMKDF 130
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 312/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+ WN +I G + G ++EA +I + L + TL++VL A
Sbjct: 364 MSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASAT 423
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A + G + + + LI+ Y KC+ + D+ R+F D I+ S+I Q
Sbjct: 424 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQC 483
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +K F +ML ++P SS++ ACA L+ GKQ+H +I+ F + F
Sbjct: 484 DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG 543
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAKCG+I A F + +VSW+A+I G A HG+ A+ LF +M +G+
Sbjct: 544 NALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 603
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +VL AC+HAGL+D+A YFNSM + +GI + EHY+ + DLLGRAGKL +A E
Sbjct: 604 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 663
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M +VW LL A RVHK+ EL AEK+F+++P G +V+L+NTYA++
Sbjct: 664 LVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGM 723
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R M++ +KK PA SW+EVK+K + F+ GDKSHP I L EL + M +
Sbjct: 724 WNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSK 783
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P+ LHD++ +K+ LL +HSERLA+ F ++ TP G IR+ KNLR+C DCH A
Sbjct: 784 AGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMA 843
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFIS IV REII+RD +RFHHF DG CSCGDYW
Sbjct: 844 FKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 141/255 (55%), Gaps = 4/255 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW++++ + NGL A+ M + + F L VL D G ++H
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---AQLGAQVHAM 125
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQNGLFDE 125
A+ G ++V + ++L+ MY ++D+ R+F ++A+SWN +++ V+N +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD 185
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F +M+ + I+P FS ++ AC + G+Q+H ++R G++ ++F A++L+D
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVD 245
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY K G + +A IF+KM D+VSW A+I G L+G+ H AI L QM+ G+ PN
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFM 305
Query: 246 FVAVLTACSHAGLID 260
++L AC+ AG D
Sbjct: 306 LSSILKACAGAGAFD 320
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSWN ++ +N +A+ + +M ++P F S V+ ++ G+++H
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAM 227
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R G + +V ++L++MY K RV+ + +F +P D +SWN++I+GCV NG
Sbjct: 228 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ QM + + P SSI+ ACA LG+Q+HG +I+ D + +I L+DM
Sbjct: 288 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKDGVKPNSVA 245
YAK + A +FD M D++ W A+I G + HG HD A S+F + K+G+ N
Sbjct: 348 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCS-HGGRHDEAFSIFYGLRKEGLGVNRTT 406
Query: 246 FVAVLTACS 254
AVL + +
Sbjct: 407 LAAVLKSTA 415
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 177/357 (49%), Gaps = 12/357 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP SD+VSWN +I G NG A+ ++ QM + L P+ F LSS+L A G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG+ I+ D++ IG L++MYAK ++D+ ++F + +D I WN++I+GC
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 382
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE F + + + ++++ + A L +Q+H + GF + +
Sbjct: 383 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 442
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D Y KC + A +F++ DI++ T++I + + AI LF +M + G++
Sbjct: 443 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ ++L AC+ ++ + K ++ +F A V + G +++A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY-TYAKCGSIEDAEL 561
Query: 301 FISNMHAGPTENV--WLTLLSACRVH----KNVELAGKVAEKIFMIDPNNMGAYVIL 351
S++ P V W ++ H + +EL G++ ++ I+PN++ +L
Sbjct: 562 AFSSL---PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE--GINPNHITMTSVL 613
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 16/294 (5%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T+S L +A ++ G +H ++ G A+ + + LI+ Y+KC R + R+F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEI 63
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S++ NGL ++ F M + + ++ + LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGA 120
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALH 221
Q+H + GF ++F+A++L+ MY G + AR +FD+ + VSW ++ +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
DAI +F +M G++P F V+ AC+ + ID A ++M G
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID-AGRQVHAMVVRMGYEKDVFT 239
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRV----HKNVEL 329
A+ D+ + G++ A M P +V W L+S C + H+ +EL
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKM---PDSDVVSWNALISGCVLNGHDHRAIEL 290
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 307/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW T+I G + ++AL RQM + ++ D L++ + A + +G++IH
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A G +++ ++L+ +Y++C ++E+S+ F D I+WN++++G Q+G +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F +M I + +F S + A + + GKQ+H I + G+D + ++L+
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 734
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I A F ++ + VSW A+I + HG +A+ F+QM V+PN V
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 794
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V VL+ACSH GL+DK +YF SM +YG++P EHY V D+L RAG L A EFI
Sbjct: 795 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 854
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLLSAC VHKN+E+ A + ++P + YV+LSN YA +++W
Sbjct: 855 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDAR 914
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ KG+KK P SWIEVKN ++F GD++HP I+E ++L +R + GYV
Sbjct: 915 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 974
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D +L++++ EQK +++ HSE+LAI FG++ P I ++KNLRVC DCH IKF+
Sbjct: 975 QDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFV 1034
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REIIVRD RFHHFE G CSC DYW
Sbjct: 1035 SKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 160/305 (52%), Gaps = 6/305 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF---ADYVDV 57
MP + +WN +I LA L E + +M + N+ P+ T S VL + DV
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
++ +IH + GL + + + LI++Y++ V+ + R+F L +KD SW ++I+G
Sbjct: 206 VE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+N E ++ F M + I P +FSS++ AC + +L +G+QLHG +++ GF +
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++ ++L+ +Y GN+ A IF M D V++ +I G + G A+ LF++M D
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+S +++ ACS G + + ++ T G A + + A+ +L + ++
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 298 AYEFI 302
A ++
Sbjct: 443 ALDYF 447
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++V WN ++V + I RQM + P+ +T S+L D+ G++
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH I+ N + S LI+MYAK +++ + + KD +SW ++IAG Q
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D+ L FRQML I+ V ++ + ACA L L G+Q+H +GF ++ ++
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +Y++CG I + F++ + D ++W A++ G GN +A+ +F +M ++G+ N
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ F + + A S + + +TK G E A+ + + G + +A
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA 746
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 164/324 (50%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + D SW +I GL++N EA+ + M + + P + SSVL + G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ G ++ + ++L+++Y + + +F + +DA+++N++I G Q
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ ++ F++M + ++P + +S++ AC+ TL G+QLH + GF N I
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LL++YAKC +I A F + ++ ++V W +++ L + ++ +F QM+ + +
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQ 296
PN + ++L C G ++ + + K +F+ A V D+ + GKL
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIK-----TNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
A++ + AG W T+++
Sbjct: 543 TAWDILIRF-AGKDVVSWTTMIAG 565
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 5/296 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H ++ GLD+N C+ L + Y + + ++F +P + +WN +I
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNM 177
L E F +M+ + P +FS ++ AC + +Q+H I+ G D+
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ + L+D+Y++ G + LAR +FD + L D SW A+I G + + +AI LF M
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ P AF +VL+AC ++ + + G + A+ L G L
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 298 AYEFISNMHA--GPTENVWLTLLSACRV-HKNVELAGKVAEKIFMIDPNNMGAYVI 350
A SNM T N + LS C K +EL ++ D N + + V+
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 138 IKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
I+P H + ++ C +L G++LH I++ G D N ++ L D Y G++ A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+FD+M I +W +I A + LF +M + V PN F VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/519 (40%), Positives = 315/519 (60%), Gaps = 17/519 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+ N +I L+++G EEA N+ M N S + +S++ + D+
Sbjct: 71 MPRRDVVANNAMISALSKHGYVEEARNLFDNMTERN----SCSWNSMITCYCKLGDI--- 123
Query: 61 KEIHGYAIRHGLDAN----VCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIA 115
+ R D N V +++I+ Y K ++ + LF L+ +++++WN++I+
Sbjct: 124 -----NSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMIS 178
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
VQ G F + F+QM +KP V+ S++ ACAHL L +G+ +HG I
Sbjct: 179 AYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKI 238
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ + ++L+DMY KCG + A +F + +I W ++I+G ++G +AI+ F ME
Sbjct: 239 DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME 298
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
K+G+KP+ V FV +L+ CSH+GL+ YF+ M YG+ P EHY + DLLGRAG L
Sbjct: 299 KEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYL 358
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
+EA E I M P V +LL AC++HK+ +L +V +++ +DP + G YV LSN Y
Sbjct: 359 KEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLY 418
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A+ RW D + R M +G+ KTP CS IEV N + FVAGD SHP + +IN L E+
Sbjct: 419 ASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIA 478
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+ ++ +G+VP+T VLHD+EEE+K+ + YHSER+A+ FG++ TP G TIR++KNLR C
Sbjct: 479 KELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCS 538
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH+A+K IS +REIIVRD RFHHF +G CSC DYW
Sbjct: 539 DCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 126/264 (47%), Gaps = 12/264 (4%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P + S +L A + G+ H ++ G + ++ + + L++ YAK ++ + R+
Sbjct: 8 PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F +P +D ++ N++I+ ++G +E F M + S++S++ L +
Sbjct: 68 FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCYCKLGDI 123
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMG 217
+ + + C N D + ++++D Y K + A+ +F M + V+W +I
Sbjct: 124 NSARLMFDC---NPVKD-VVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISA 179
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIA 276
G AIS+F+QM+ + VKP V V++L+AC+H G +D W + TK I
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239
Query: 277 PSFEHYAAVADLLGRAGKLQEAYE 300
+ A+ D+ + G L+ A +
Sbjct: 240 VVLGN--ALIDMYCKCGALEAAID 261
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML + P SFS I+ +CA LG+ H I++ GF+ +M + + LLD YAK G+
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
++ A+ +F M D+V+ A+I + HG +A +LF+ M + NS ++ +++T
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITC 116
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
G I+ A F D + A+ D ++ +L A E M +
Sbjct: 117 YCKLGDINSARLMF-----DCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSV 171
Query: 313 VWLTLLSA 320
W T++SA
Sbjct: 172 TWNTMISA 179
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/517 (40%), Positives = 312/517 (60%), Gaps = 4/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
M DLV W +I + EEAL + ++M L DS + SV DV
Sbjct: 18 MSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQLGDVKN 77
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+HGYA R L +C+G+S++ M+ KC E + +F ++ +D ISWNS+++G Q
Sbjct: 78 AHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQ 137
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L F +M + +P V+ ++ ACA+L HLG++ H I+ + + + +
Sbjct: 138 NGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNL 197
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+++L+DMYAKCG++ A +F+ + + SW +I G +HG+ +A+ LF +M+++
Sbjct: 198 SNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEE 257
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV+PN F ++L+ACSHAGLID+ F M K + +H+A V D+LGRAG LQE
Sbjct: 258 GVEPNHFTFTSILSACSHAGLIDEGRKCFAEM-KRLSVTLEDKHHACVVDMLGRAGLLQE 316
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A++ I M + P++ VW LL AC++H N+EL A + ++PN+ G YV++SN YAA
Sbjct: 317 AFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNIYAA 376
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+ +WK+ LR M+NKG+KK A S IE F D+ +P+ H + + ++ L
Sbjct: 377 SNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENPYRHEVYKKMESLAIE 436
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M+ GYVPD LHDVEEE K+ +L YHSE+LA+ FG++ G IR+ KNLRVC DC
Sbjct: 437 MKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKNLRVCNDC 496
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+A K+IS I QR+IIVRD +RFHHF+ G CSC DYW
Sbjct: 497 HSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 13/276 (4%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHV 143
MYAKC D ++F + KD + W ++I Q +E L F++M + + +
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ S+ A L + +HG R + + + +S+L M+ KCGN AR +FD M
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D++SW +++ G +G A +A+ LF++M +P V + +++AC++ G
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGF-RHLG 179
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE---NVWLTLLSA 320
F+ D + A+ D+ + G L++A + + + PTE W L+S
Sbjct: 180 RKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGI--PPTERNAGSWNVLISG 237
Query: 321 CRVH----KNVELAGKVAEKIFMIDPNNMGAYVILS 352
+H + +EL ++ E+ ++PN+ ILS
Sbjct: 238 YGMHGHGKEALELFSRMQEE--GVEPNHFTFTSILS 271
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 326/545 (59%), Gaps = 36/545 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S+L N + R GL EAL + M + ++PD ++ S + + +++ GK
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 64 HGYAIRHGLDA--NVCIGSSLINMYAKCARVEDSHRLFC--------------------- 100
HGY +R+G ++ N+C ++LI+MY KC R + + R+F
Sbjct: 360 HGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 101 ----------LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIM 149
+P K+ +SWN+II+G VQ LF+E ++ F M + + V+ SI
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC HL L L K ++ I +NG ++ + ++L+DM+++CG+ A IF+ + D+
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+WTA I A+ GNA AI LF+ M + G+KP+ VAFV LTACSH GL+ + F SM
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K +G++P HY + DLLGRAG L+EA + I +M P + +W +LL+ACRV NVE+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AEKI ++ P G+YV+LSN YA+A RW D A +R+ M+ KG++K P S I+++
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + F +GD+SHP I L E+ +R G+VPD VL DV+E++K +L HSE+
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEK 777
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ +G+I + GTTIRI+KNLRVC DCH+ KF SK+ REII+RDN+RFH+ GKCS
Sbjct: 778 LAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCS 837
Query: 510 CGDYW 514
CGD+W
Sbjct: 838 CGDFW 842
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 132/248 (53%), Gaps = 1/248 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I G A +GL EA+ + +M N + PD +T L A G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G ++ + +SL++ YA+C ++ + ++F + ++ +SW S+I G + + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 129 -FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FFR + ++ P V+ ++ ACA L L G++++ I +G + N + S+L+DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KC I +A+ +FD+ ++ A+ G +A+ +F M GV+P+ ++ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 248 AVLTACSH 255
+ +++CS
Sbjct: 342 SAISSCSQ 349
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 3/238 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSWNT+I GL + L+EEA+ + M + D T+ S+ +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K I+ Y ++G+ +V +G++L++M+++C E + +F L +D +W + I
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMF 178
G + ++ F M+ +KP V+F + AC+H + GK++ +++ +G
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQME 235
++D+ + G + A + + M + + V W +++ + GN A E+++
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 305/510 (59%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW T+I G + ++AL RQM + ++ D L++ + A + +G++IH
Sbjct: 538 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 597
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A G +++ ++L+ +Y+KC +E+++ F D I+WN++++G Q+G +
Sbjct: 598 AQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNE 657
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F +M I + +F S + A + + GKQ+H I + G+D + ++++
Sbjct: 658 EALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAII 717
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I A+ F ++ + + VSW A+I + HG +A+ F+QM V+PN V
Sbjct: 718 SMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHV 777
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V VL+ACSH GL+DK YF SM +YG+AP EHY V D+L RAG L A +FI
Sbjct: 778 TLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILE 837
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLLSAC VHKN+E+ A + ++P + YV+LSN YA R+W
Sbjct: 838 MPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDAR 897
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ KG+KK P SWIEVKN ++F GD++HP I+E K+L +R + GYV
Sbjct: 898 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYV 957
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D +L ++++EQK ++ HSE+LAI FG++ P I ++KNLRVC DCH IKF+
Sbjct: 958 QDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFV 1017
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REIIVRD RFHHFE G CSC DYW
Sbjct: 1018 SKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++V WN ++V + I RQM + P+ +T S+L D+ G++
Sbjct: 435 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 494
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH I+ N + S LI+MYAK +++ + + KD +SW ++IAG Q
Sbjct: 495 IHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 554
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D+ L FRQML I+ V ++ + ACA L L G+Q+H +GF ++ ++
Sbjct: 555 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 614
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +Y+KCGNI A F++ + D ++W A++ G GN +A+ +F +M ++G+ N
Sbjct: 615 LVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSN 674
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ F + + A S + + +TK G E A+ + + G + +A
Sbjct: 675 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNAIISMYAKCGSISDA 729
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 159/305 (52%), Gaps = 6/305 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF---ADYVDV 57
MP + +WN +I LA L + + +M N N+ P+ T S VL + DV
Sbjct: 129 MPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDV 188
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
++ +IH I GL + + + LI++Y++ V+ + R+F L +KD SW ++I+G
Sbjct: 189 VE--QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGL 246
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+N E ++ F M + I P +FSS++ AC + +L +G+QLHG +++ GF +
Sbjct: 247 SKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 306
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++ ++L+ +Y G++ A IF M D V++ +I G + G A+ LF++M+ D
Sbjct: 307 YVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD 366
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+S +++ ACS G + ++ T G A + + A+ +L + ++
Sbjct: 367 GLEPDSNTLASLVVACSSDGTLFSG-QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIET 425
Query: 298 AYEFI 302
A +
Sbjct: 426 ALNYF 430
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 163/322 (50%), Gaps = 10/322 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D SW +I GL++N EA+ + M + + P + SSVL + G++
Sbjct: 233 LKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 292
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HG ++ G ++ + ++L+++Y + + +F + +DA+++N++I G Q G
Sbjct: 293 LHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 352
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++ ++ F++M + ++P + +S++ AC+ TL G+QLH + GF N I +
Sbjct: 353 GEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGA 412
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LL++YAKC +I A F + ++ ++V W +++ L + ++ +F QM+ + + PN
Sbjct: 413 LLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 472
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEA 298
+ ++L C G ++ + + K SF+ A V D+ + GKL A
Sbjct: 473 QYTYPSILKTCIRLGDLELGEQIHSQIIK-----TSFQLNAYVCSVLIDMYAKLGKLDTA 527
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
++ + AG W T+++
Sbjct: 528 WDILIRF-AGKDVVSWTTMIAG 548
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 155/348 (44%), Gaps = 8/348 (2%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP-IFADYVDVIKGKEIHGY 66
S+ + V ++ + ++E N + + N ++P+ TL +L + +G+++H
Sbjct: 36 SFTAISVSISEDESFQE--NGIDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQ 93
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G D N C+ L++ Y ++ + ++F +P + +WN +I L +
Sbjct: 94 ILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKV 153
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
F +M+ + P +FS ++ AC + +Q+H II G + + + L+D
Sbjct: 154 FCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLID 213
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
+Y++ G + AR +FD + L D SW A+I G + + +AI LF M G+ P A
Sbjct: 214 LYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYA 273
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F +VL+AC ++ + + G + A+ L G L A SNM
Sbjct: 274 FSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNM 332
Query: 306 HA--GPTENVWLTLLSACRV-HKNVELAGKVAEKIFMIDPNNMGAYVI 350
T N + LS C K +EL ++ D N + + V+
Sbjct: 333 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVV 380
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/506 (39%), Positives = 299/506 (59%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SWN + GL G+Y+ L I M P+ +T S+L + DV G+++H
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ I++ LD N + ++LI+MYAKC +ED+ F L V+D +W II Q +
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGE 599
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L +FRQM +KP + + + C+ L +L G+QLH + ++G +MF+ S+L+
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG + A +F+ + D ++W +I G A +G + A++ F M +G+ P+ V
Sbjct: 660 DMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGV 719
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +L+ACSH GL+++ +FNSM +D+GI+P+ +H A + D+LGR GK E +FI
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQK 779
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M +W T+L A ++H N+ L K A K+F + P +Y++LSN +A RW D
Sbjct: 780 MQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDV 839
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M +KG+KK P CSW+E + + FV+ D SHP I+ L EL + YV
Sbjct: 840 KRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYV 899
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P T+ VLH+V E +KK L +HSERLA+ F +I T IRI KNLR+C DCH +K I
Sbjct: 900 PKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHI 959
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSC 510
S I +EI+VRD RFHHF++G CSC
Sbjct: 960 SSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 158/294 (53%), Gaps = 1/294 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V W+ +I L + G EE++ + M + P+ +T+ S+L + ++ G+ IH
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIH 438
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++G + +V + ++L+ MY K V D +L+ + +D ISWN+ ++G G++D
Sbjct: 439 ACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYD 498
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L F ML P +F SI+ +C+ L +H G+Q+H II+N DDN F+ ++L+
Sbjct: 499 RPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALI 558
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKC + A F+++ + D+ +WT +I A A++ F QM+++GVKPN
Sbjct: 559 DMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEF 618
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
L+ CS ++ + + K ++ F +A+ D+ + G ++EA
Sbjct: 619 TLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG-SALVDMYAKCGCMEEA 671
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 5/289 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW +I GL G +++ + ++M N + P+ FTL++ L + + + G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A + GL ++ +GS+L+++YAKC +E + ++F +P ++ ++WN ++ G Q
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G LK F M+ +K + ++++ CA+ L G+ +H II+ G++ N FI
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KCG A +F + DIV W+A+I G + ++I LF M
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
PN ++L+A ++ G + S + K YG FE AV++ L
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWK-YG----FETDVAVSNAL 456
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 135/254 (53%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+WN ++ G A+ G L + M +++K + FTL++VL A+ ++ +G
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH I+ G + N IG L++MY+KC D+ +F + D + W+++I Q
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E +K F M + P + S++ A + L G+ +H C+ + GF+ ++ ++
Sbjct: 394 GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVS 453
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G + +++ M D++SW A + G G +++F M ++G
Sbjct: 454 NALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI 513
Query: 241 PNSVAFVAVLTACS 254
PN F+++L +CS
Sbjct: 514 PNMYTFISILGSCS 527
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V DL +W +I A+ E+ALN RQM +KP+ FTL+ L + + G
Sbjct: 577 LSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + G +++ +GS+L++MYAKC +E++ LF L +D I+WN+II G QN
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ L FR ML I P V+F+ I+ AC+H + GK+ + R+ G +
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGN 223
+ ++D+ + G KM L + + W V+ + +H N
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNN 801
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 104/197 (52%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K IHG ++ ++ + + SL+N+YAKC + + +P +D +SW ++I G V
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G ++ + F++M I P + ++ + AC+ L LGKQ+H + G ++F+
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+D+YAKCG I LA +F M + V+W ++ G A G+ + LF M + V
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310
Query: 240 KPNSVAFVAVLTACSHA 256
K N VL C+++
Sbjct: 311 KCNEFTLTTVLKGCANS 327
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+SS++ CA +L + K +HG I+++ + + + SL+++YAKC AR + KM
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+VSWTA+I G G A+D+I LF++M+ +G+ PN L ACS +D
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-K 233
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSA 320
++ G+ +A+ DL + G+++ A + M P +N W LL+
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGM---PEQNDVTWNVLLNG 288
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ + V W +I G + +M + D F + ++ + +G
Sbjct: 174 VPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEG 233
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K HG I+ +D+N + +SL++MY KC ++ + +LF + +D + W++IIAG +
Sbjct: 234 KTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFAR 293
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E + FRQML + P V+F+SI+ AC+ L +L G+ +HG +IRNG + ++
Sbjct: 294 NGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKN 353
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S +DMYAKCG I A +F ++ ++ SW+ +I G +HG +A++LF +M
Sbjct: 354 YTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQ 413
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PNSV FV+VL+ACSH+G I++ WS+F SM++DYGI P EHYA + DLLGRAGK+ EA
Sbjct: 414 LPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEAL 473
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI+NM P + W LL ACR+H+ ELA +VA+K+ ++ + G YV+LSN YA
Sbjct: 474 SFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVG 533
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W+ R+ M KG+ K + IE++ K Y F + D+ +I L ERM
Sbjct: 534 MWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMR 593
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPD + VLHDV++E K+ +L HSE+LAIVFG++ + +G IRI KN+RVCGDCHT
Sbjct: 594 ELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHT 653
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS I +R+II+RD RFHH +DG CSCGDYW
Sbjct: 654 ASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 177/329 (53%), Gaps = 19/329 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY-VDVIKG-KE 62
+L SWNT++ ++N + + L + ++M DSF L V + A + + + +G K
Sbjct: 77 NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL--VFAVKACFGLSLFQGAKL 134
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV---- 118
H AI+ L+ + + +L+N+Y + +E++H++F +P+K+++ W +I G +
Sbjct: 135 FHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSE 194
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNM 177
+ G+F+ F +M + + ++ AC ++ GK HG CI +N D N
Sbjct: 195 EFGVFE----LFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNF 250
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+ +SL+DMY KCG + A +F+++ D+V W+A+I G A +G A ++IS+F QM D
Sbjct: 251 FLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLAD 310
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
V PNSV F +++ ACS G + + S M ++ G+ ++Y + D+ + G +
Sbjct: 311 SVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVT 369
Query: 298 AYEFISNMHAGPTENV--WLTLLSACRVH 324
AY + P +NV W T+++ +H
Sbjct: 370 AYRVFCQI---PEKNVFSWSTMINGFGMH 395
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 112/260 (43%)
Query: 46 SVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK 105
++L +F + +++ + + L ++ G + Y + + + + F + +
Sbjct: 17 TLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFE 76
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+ SWN+I+A +N F + L+ F++ML + + AC L+ K H
Sbjct: 77 NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFH 136
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
I+ + + ++A +L+++Y + G++ A +F+++ L + V W +I G+
Sbjct: 137 SLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEF 196
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
LF +M + G + + ++ AC + + ++ K I +F ++
Sbjct: 197 GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSL 256
Query: 286 ADLLGRAGKLQEAYEFISNM 305
D+ + G L A + +
Sbjct: 257 VDMYMKCGFLDFALKLFEEI 276
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/546 (39%), Positives = 322/546 (58%), Gaps = 33/546 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKG 60
P DL +++++ ++ + E L ++R+M + + L+PD F L+S+ A + G
Sbjct: 65 PRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLG 124
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++HG+ + ++ + SSLI+MY KC +D+ ++F + K+++ W ++I+G V N
Sbjct: 125 KQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLN 184
Query: 121 GLFDEGLKFFRQM--------------------------LIAKIKPRHVS------FSSI 148
G DE L+ FR M L ++ VS SS
Sbjct: 185 GRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSA 244
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ A L LG+QLH +R GF +M + ++++DMY+KC +I AR +F+++ DI
Sbjct: 245 IGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDI 304
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWT +++G A HG A +A SL+++M GVKPN V FV ++ ACSHAGL+ K F+S
Sbjct: 305 ISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDS 364
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M +YGI P +HY DLL R+G L EA E I+ M P E W +LLSAC+ + N E
Sbjct: 365 MKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAE 424
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
++ +VA+ + + P YV+LSN YA +W ++R M + ++K P SWIEV
Sbjct: 425 MSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVG 484
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
+ F AG+ I L+EL+ M Q GYVPDT V+HD+EE +K++ L HSE
Sbjct: 485 REFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLEEHEKEHHLCLHSE 544
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
RLA+ FGI+ +P G+ IR++KNLRVC DCHT +KFIS+I QR+IIVRD SRFHHFE GKC
Sbjct: 545 RLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVRDASRFHHFEGGKC 604
Query: 509 SCGDYW 514
SC ++W
Sbjct: 605 SCSEFW 610
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 123/237 (51%), Gaps = 3/237 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIK 59
MP L +W +I G R+G A+ + M + D+F LSS + AD +
Sbjct: 197 MPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVL 256
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H +R G +++ +G+++++MY+KC+ + + +F + +D ISW +++ G Q
Sbjct: 257 GRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQ 316
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMF 178
+G +E + +M++A +KP V+F ++ AC+H + G+QL + G + +
Sbjct: 317 HGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQ 376
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ LD+ ++ G++ A + M + D +W +++ + NA +I + + +
Sbjct: 377 HYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNL 433
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 5/213 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H I+ GL + + L++ YAK + D+ LF P +D ++S++A +
Sbjct: 23 RRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHS 82
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ L R+ML A ++P H +SI A A L +L LGKQLHG + + + + +
Sbjct: 83 ESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVV 142
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SSL+DMY KCG AR +FD + + V WTA+I G L+G + +A+ LF M +
Sbjct: 143 KSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTL 202
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+ A+++ +G A F M +D
Sbjct: 203 ----FAWTALISGFVRSGESVSAVKLFVDMRRD 231
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 298/449 (66%)
Query: 51 FADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISW 110
A +DV +G+++H AIR+G ++ V + ++L++MYA C E +H+LF L+ ++ ++W
Sbjct: 5 IAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTW 64
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
NS+I G NG +E L FR+M + ++P + S++ ACA L L LG++ H +++
Sbjct: 65 NSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK 124
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G D N+ ++LLD+YAKCG+IR A +FD+M+ +VSWT++I+G A++G +A+ L
Sbjct: 125 VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALEL 184
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F+++E+ G+ P+ + FV VL ACSH G++D+ + YF M ++YGI P EHY + DLLG
Sbjct: 185 FKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLG 244
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
RAG +++A+EFI NM P VW TLL AC +H ++ L ++ ++P + G YV+
Sbjct: 245 RAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVL 304
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YA+ +RW D +R M +G+KKTP S +E++N+ + FV GD+SHP I
Sbjct: 305 LSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVK 364
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L E+ + ++ EGYVP VL D+EEE+K+ L YHSE++AI F +I T G IR++KN
Sbjct: 365 LAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKN 424
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSR 499
LRVC DCH AIK ISK+ REI+VRD SR
Sbjct: 425 LRVCADCHLAIKLISKVFDREIVVRDRSR 453
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 120/230 (52%), Gaps = 14/230 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +LV+WN+VI G A NG EAL + R+MG ++PD FT+ S+L A+ + G
Sbjct: 56 MAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 115
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H Y ++ GLD N+ G++L+++YAKC + +H++F + K +SW S+I G N
Sbjct: 116 RRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVN 175
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-------KQLHGCIIRNGF 173
G E L+ F+++ + P ++F ++ AC+H + G K+ +G + +
Sbjct: 176 GFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPK--- 232
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHG 222
+ ++D+ + G ++ A M + + V W ++ +HG
Sbjct: 233 ---IEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 279
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
A A L + G+++H IRNGF+ +F+ ++L+ MYA CG+ A +F+ M ++V+
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +VI G AL+G ++A++LF +M GV+P+ V++L+AC+ G + M
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
K G+ + A+ DL + G +++A++ M
Sbjct: 124 K-VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME 158
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 312/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++I G ++ +EAL ++M + PD+ L+S + A V +G +IH
Sbjct: 410 DVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIH 469
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A+V I + L+ +YA+C +++ F + K+ I+WN +I+G Q+GL++
Sbjct: 470 ARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYE 529
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E LK F +M A K +F S + A A+L + GKQ+H +I+ G+ I+++L+
Sbjct: 530 EALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALI 589
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A+ F +M + VSW +I + HG +A+ LF+QM++ G+KP+ V
Sbjct: 590 SLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDV 649
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VLTACSH GL+++ YF SM+ ++GI P +HYA V D+LGRAG+L A F+
Sbjct: 650 TFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEE 709
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M VW TLLSAC+VHKN+E+ A+ + ++P++ +YV+LSN YA +W
Sbjct: 710 MPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASR 769
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M+++G++K P SWIEVKN +AF GD+ HP +I L L +R+ + GY
Sbjct: 770 DQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYK 829
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+ + H+ E+E K + HSE+LA+ FG++ P +R+IKNLRVC DCHT +KF
Sbjct: 830 QENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFT 889
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S ++ REI++RD RFHHF +G CSCGDYW
Sbjct: 890 SGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 161/304 (52%), Gaps = 11/304 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V++NT+I G A+ G + AL I +M L PDS T++S+L + D+ KG
Sbjct: 204 MLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKG 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H Y ++ G+ + + SL+++Y K +E++ ++F + + WN ++ Q
Sbjct: 264 KQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQI 323
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ F +ML A ++P ++ ++ C H + LG+Q+H I+NGF +M+++
Sbjct: 324 DDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS 383
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+K G + A+ I D ++ D+VSWT++I G H +A+ F++M+ G+
Sbjct: 384 GVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443
Query: 241 PNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
P+++ + ++AC+ H G A Y + + D I + + L R G
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI------WNGLVYLYARCGIS 497
Query: 296 QEAY 299
+EA+
Sbjct: 498 KEAF 501
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 174/348 (50%), Gaps = 4/348 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V D VSW V+ G A+NGL EEA+ + R+M + P + LSS+L G
Sbjct: 103 LSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLG 162
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + G + +G++LI++Y +C + R+FC + D++++N++I+G Q
Sbjct: 163 RLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQC 222
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D L F +M ++ + P V+ +S++ AC+ + L GKQLH +++ G + +
Sbjct: 223 GHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME 282
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SLLD+Y K G+I A IFD D ++V W +++ + + +F +M GV+
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVR 342
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +L C+H G I +S+T G + D+ + G L +A
Sbjct: 343 PNKFTYPCMLRTCTHTGEIGLG-EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQR 401
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMG 346
+ + + W ++++ H+ + A + +++ I P+N+G
Sbjct: 402 ILDMIEEKDVVS-WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIG 448
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 166/321 (51%), Gaps = 2/321 (0%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++V WN ++V + ++ +I +M ++P+ FT +L ++ G++I
Sbjct: 308 TNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI 367
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H I++G +++ + LI+MY+K ++ + R+ ++ KD +SW S+IAG VQ+
Sbjct: 368 HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFC 427
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+ F++M I P ++ +S + ACA + +H G Q+H + +G+ ++ I + L
Sbjct: 428 KEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGL 487
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ +YA+CG + A F+ ++ + ++W +I G A G +A+ +F +M++ G K N
Sbjct: 488 VYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNV 547
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
FV+ ++A ++ I + + K G E A+ L G+ G +++A
Sbjct: 548 FTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSIEDAKMDFF 606
Query: 304 NMHAGPTENVWLTLLSACRVH 324
M E W T+++ C H
Sbjct: 607 EM-TKRNEVSWNTIITCCSQH 626
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 142/261 (54%), Gaps = 6/261 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
EIH AI GL IG+ LI++YAK V + R+F L V+D +SW ++++G QNG
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L +E ++ +R+M + + P SSI+ AC LG+ +H + + GF F+ +
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ +Y +C + RLA +F M D V++ +I G+A G+ A+ +F++M+ G+ P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+SV ++L ACS G + K + + K G++ + ++ DL ++G ++EA +
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKA-GMSLDYIMEGSLLDLYVKSGDIEEALQI 301
Query: 302 ISNMHAGPTENV--WLTLLSA 320
+G NV W +L A
Sbjct: 302 FD---SGDRTNVVLWNLMLVA 319
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/517 (41%), Positives = 318/517 (61%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP + V+W+ +I G +A + + M G L P S ++S L A +
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHL 241
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+++H + G+ A++ G+SL++MYAK ++ + LF + VKD +S++++++G
Sbjct: 242 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 301
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG +E F++M ++P + S++PAC+HL L G+ HG +I G
Sbjct: 302 VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 361
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++L+DMYAKCG I L+R +F+ M DIVSW +I G +HG +A +LF +M
Sbjct: 362 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 421
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G P+ V F+ +L+ACSH+GL+ + +F+ M YG+ P EHY + DLL R G L E
Sbjct: 422 GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 481
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI +M VW+ LL ACRV+KN++L KV+ I + P G +V+LSN Y+A
Sbjct: 482 AYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R+ +AA +R+ + +G KK+P CSWIE+ +AFV GD+SHP I L +L
Sbjct: 542 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVG 601
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GY PDT VL D+EEE+K+ L HSE+LAI +GI+ + TI + KNLRVCGDC
Sbjct: 602 IKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDC 661
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK IS + +R IIVRD +RFHHF++G+CSCGD+W
Sbjct: 662 HTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 194/363 (53%), Gaps = 28/363 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN--IVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP DLV+WN ++ G A +G+Y A+ + QM L+P++ TL ++LP+ A +
Sbjct: 71 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 59 KGKEIHGYAIRHGLDAN----------VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI 108
+G +H Y IR L N V +G++L++MYAKC + + R+F +P ++ +
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 190
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQML---IAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+W+++I G V + F+ ML + + P S +S + ACA L L +G+QLH
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLH 248
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
+ ++G ++ +SLL MYAK G I A +FD+M + D VS++A++ G +G A
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A +F++M+ V+P++ V+++ ACSH + S+ G+A A+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNAL 367
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
D+ + G++ + + + M P+ ++ W T+++ +H GK A +F+ + N
Sbjct: 368 IDMYAKCGRIDLSRQVFNMM---PSRDIVSWNTMIAGYGIHG----LGKEATALFL-EMN 419
Query: 344 NMG 346
N+G
Sbjct: 420 NLG 422
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 60/338 (17%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
+ P+++T L + D G+ IH +AI GL A++ + ++L++MY KCA + D+
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFF--RQMLIAKIKPRHVSFSSIMPACAH 154
+F +P +D ++WN+++AG +G++ + QM + +++P + +++P A
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 155 LTTLHLGKQLHGCIIR----------NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
L G +H IR + D + + ++LLDMYAKCG++ AR +FD M
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG---VKPNSVAFVAVLTAC-------- 253
+ V+W+A+I G L A LF+ M G + P S+A + L AC
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRM 243
Query: 254 ---------------------------SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA 286
+ AGLID+A + F+ M ++ Y+A+
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALV 298
Query: 287 DLLGRAGKLQEAYEFISNMHA---GPTENVWLTLLSAC 321
+ G+ +EA+ M A P ++L+ AC
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML ++ P + +F + AC+ L H G+ +H I G ++F++++LLDMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS--LFEQMEKDGVKPNSVAFVAVL 250
+ A IF M D+V+W A++ G A HG H A++ L QM+ ++PN+ VA+L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 251 TACSHAGLIDKAWS 264
+ G + + S
Sbjct: 121 PLLAQQGALAQGTS 134
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 323/544 (59%), Gaps = 38/544 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT++ ++ E+AL + + M N+ PD++T V+ A + GKEIH + +
Sbjct: 97 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVL 156
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV---------- 118
+ G D++V + ++LINMYA C + D+ +LF PV D++SWNSI+AG V
Sbjct: 157 KVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVME 216
Query: 119 ------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
QNG+++E L F +M ++ V S++ ACAH
Sbjct: 217 AWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAH 276
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLL----DMYAKCGNIRLARCIFDKMDLHDIVS 210
L+ + GK +HG +IR G + + + ++L+ DMY KCG + A +F+ M+ + S
Sbjct: 277 LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSS 336
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W A+I+G A++G ++ +F +M+ +GV PN + F+ VL AC H GL+D+ +F SM
Sbjct: 337 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 396
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ +GI P+ +HY + DLLGRAG L EA + I +M P W LL AC+ H + E+
Sbjct: 397 EKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMG 456
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
+V K+ + P++ G +V+LSN +A+ W+D +R M+ +G+ KTP CS IE
Sbjct: 457 ERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGV 516
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ F+AGDK+HP+ +++ L E+ +R++ EGY PDT EV D++EE+K+ L+ HSE+L
Sbjct: 517 VHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKL 576
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG++ T IRI+KNLR+C DCHTA K ISK REI+VRD RFH+F++G CSC
Sbjct: 577 AIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSC 636
Query: 511 GDYW 514
DYW
Sbjct: 637 MDYW 640
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW+ +I G +NG+YEEAL + +M ++ D + SVL A V G
Sbjct: 224 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 283
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA----KCARVEDSHRLFCLLPVKDAISWNSIIAG 116
K IHG IR G+++ V + ++LI+MY+ KC VE++ +F + K SWN++I G
Sbjct: 284 KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIG 343
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDD 175
NGL + L F +M + P ++F ++ AC H+ + G+ I ++G +
Sbjct: 344 LAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEP 403
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
N+ ++D+ + G + A + + M + D+ +W A++ HG+
Sbjct: 404 NVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDT 453
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 129/272 (47%), Gaps = 40/272 (14%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
S ++F + + WN+++ +Q+ ++ L ++ M+ + P + ++ ++ ACA
Sbjct: 82 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAV 141
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD------------- 201
GK++H +++ GFD ++++ ++L++MYA CGN+R AR +FD
Sbjct: 142 RLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 201
Query: 202 ---------------------KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+MD D+VSW+A+I G +G +A+ +F +M +G++
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 261
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV----ADLLGRAGKLQ 296
+ V V+VL+AC+H ++ K + + GI A+ +D+ + G ++
Sbjct: 262 LDEVVVVSVLSACAHLSIV-KTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
A E + M + W L+ V+ VE
Sbjct: 321 NALEVFNGMEEKGVSS-WNALIIGLAVNGLVE 351
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 316/541 (58%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L +N +I G + + ++A + Q L PD+ T ++ + G + H
Sbjct: 83 NLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142
Query: 65 GYAIRHGLDANVCIGSSLINMYA-------------------------------KCARVE 93
G+ I+HG + +V + +SL++MYA KC VE
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ +LF +P K+ ++W+++I+G QN FD+ ++ F+ + ++ S++ +CA
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
HL L LG++ H +++NG N+ + ++L+DMYA+CG+I A +F+ + D +SWTA
Sbjct: 263 HLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTA 322
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A+HG + ++ F M + G+ P + F AVL+ACSH GL+++ + F SM +D+
Sbjct: 323 LIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDH 382
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ P EHY + DLLGRAGKL+EA F+ M P VW LL ACR+HKN E+ +V
Sbjct: 383 RVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERV 442
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
+ + + P + G YV+LSN YA A+ W+ +R M+ KG+KK P S IE+ + +
Sbjct: 443 GKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHK 502
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD SHP +I +E+L R+ GY +T + L D++EE+K++ L+ HSE+LAI
Sbjct: 503 FTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIA 562
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG++ + GT IRI+KNLRVC DCHTA K ISK+ RE+IVRD +RFHHF G CSC DY
Sbjct: 563 FGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDY 622
Query: 514 W 514
W
Sbjct: 623 W 623
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 126/226 (55%), Gaps = 2/226 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W+T+I G A+N +++A+ + + + + ++ + + SV+ A + G
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELG 270
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H Y +++G+ N+ +G++L++MYA+C ++ + +F LP +D +SW ++IAG +
Sbjct: 271 ERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMH 330
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + LK+F M+ A + PR ++F++++ AC+H + G Q+ + R+ + +
Sbjct: 331 GYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEH 390
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
++D+ + G + A KM + + W A++ +H NA
Sbjct: 391 YGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNA 436
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 37/312 (11%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLI----NMYAKCARVEDSHRLFCLLPVKDAISWN 111
D+ K IH Y IR + +V S LI + + + ++ + R+F + + +N
Sbjct: 29 DLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFN 88
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
++I G + D+ F+ Q + P +++F ++ +C L + +G Q HG II++
Sbjct: 89 AMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKH 148
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
GF+ ++++ +SL+ MYA G+ A IF +M D+VSWT++I G G+ A LF
Sbjct: 149 GFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLF 208
Query: 232 EQM-------------------------------EKDGVKPNSVAFVAVLTACSHAGLID 260
+QM + GV+ N V+V+++C+H G ++
Sbjct: 209 DQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALE 268
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ + K+ G+ + A+ D+ R G + +A ++ T + W L++
Sbjct: 269 LGERAHDYVVKN-GMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLS-WTALIAG 326
Query: 321 CRVHKNVELAGK 332
+H E + K
Sbjct: 327 LAMHGYSERSLK 338
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 328/543 (60%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G + G ++AL + ++M + ++K T+ VL A ++ G+++
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL---------------------- 102
Y + ++ N+ + +++++MY KC +ED+ RLF +
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 103 ---------PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPAC 152
P KD ++WN++I+ QNG +E L F ++ + K +K ++ S + AC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A + L LG+ +H I ++G N + S+L+ MY+KCG++ +R +F+ ++ D+ W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G A+HG ++A+ +F +M++ VKPN V F V ACSH GL+D+A S F+ M +
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YGI P +HYA + D+LGR+G L++A +FI M P+ +VW LL AC++H N+ LA
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
++ ++P N GA+V+LSN YA +W++ + LR MR G+KK P CS IE+ +
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHSERLA 451
F++GD +HP ++ L E++E+++ GY P+ +VL +EEE+ K+ L HSE+LA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I +G+I T IR+IKNLRVCGDCH+ K IS++ REIIVRD RFHHF +G+CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 512 DYW 514
D+W
Sbjct: 736 DFW 738
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 180/359 (50%), Gaps = 39/359 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNI---VRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
+P + +WNT+I A + L+I + + P+ +T ++ A+ +
Sbjct: 90 IPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+ +HG A++ + ++V + +SLI+ Y C ++ + ++F + KD +SWNS+I G
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQ G D+ L+ F++M +K HV+ ++ ACA + L G+Q+ I N + N+
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL----------------- 220
+A+++LDMY KCG+I A+ +FD M+ D V+WT ++ G A+
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 221 --------------HGNAHDAISLFEQME-KDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+G ++A+ +F +++ + +K N + V+ L+AC+ G ++ +
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RW 386
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+S K +GI +F +A+ + + G L+++ E +++ VW ++ +H
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV-FVWSAMIGGLAMH 444
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D+V+WN +I +NG EAL + ++ N+K + TL S L A +
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IH Y +HG+ N + S+LI+MY+KC +E S +F + +D W+++I G
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G +E + F +M A +KP V+F+++ AC+H + + L + N G
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ ++D+ + G + A + M + S W A++ +H N
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/514 (38%), Positives = 306/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV+D+V++N+++ L NG E L ++R M + ++K D T + + A D+ G
Sbjct: 194 VPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLG 253
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+HG + ++ + + S++INMY KC + + +F L ++ + W +++A C QN
Sbjct: 254 LHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQN 313
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L F +M +K +++ ++ ACA L+ G LHG ++GF ++ +
Sbjct: 314 GCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVG 373
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAK G+I A+ +F M DI++W A+I G + HG A+ +F+ M
Sbjct: 374 NALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEH 433
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F VL+AC H GL+ + + Y + + K +G+ P EHY + LL + G+L EA
Sbjct: 434 PNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARN 493
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ W TLL+AC VH+N L VAE + +DPN++G Y +LSN YA +R
Sbjct: 494 FMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKR 553
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR+K +KK P SWIE+ N + F + D HP Y + + +KELL ++
Sbjct: 554 WDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKP 613
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLHDVE+EQK+ L YHSE+LAI +G++ P +I +IKNLR+C DCH+A
Sbjct: 614 LGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSA 673
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ ISK+ R I+VRD +RFHHF DG+CSC DYW
Sbjct: 674 VRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 173/310 (55%), Gaps = 10/310 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSW+ ++ G NG + + +++ M N+ P+ + L+ + D V +
Sbjct: 92 MPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEE 151
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++ HG ++ G + + ++L++MY+KC+ V+D+ ++ +PV D +++NSI++ V+
Sbjct: 152 GRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVE 211
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG EGL+ R M+ +K V+F + CA L L LG +HG ++ + + + ++
Sbjct: 212 NGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYV 271
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S++++MY KCG +AR +FD + ++V WTAV+ +G +A++LF +ME++ V
Sbjct: 272 SSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENV 331
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKL 295
K N + +L AC AGL + S+ + F+H+ V + L ++G +
Sbjct: 332 KSNEFTYAVLLNAC--AGLSARR---NGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDI 386
Query: 296 QEAYEFISNM 305
+ A + S+M
Sbjct: 387 EAAKKVFSDM 396
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 122/227 (53%), Gaps = 9/227 (3%)
Query: 37 LKPDSFTLSS------VLPIFADYVDVIKGKEIHGYAI--RHGLDANVCIGSSLINMYAK 88
L+P++ + SS +L + AD ++ GK IH + I + ++ +SLIN YAK
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSS 147
+V +H LF +P ++ +SW++++ G + NG + ++ + M+ + P +
Sbjct: 79 VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
+ +C + G+Q HG +++ GF + ++ ++L+ MY+KC ++ A +++++ ++D
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVND 198
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
IV++ +++ +G + + + M + VK + V FV + C+
Sbjct: 199 IVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCA 245
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 138 IKPRHVSFSS------IMPACAHLTTLHLGKQLHGCII--RNGFDDNMFIASSLLDMYAK 189
++P VS SS ++ A L +GK +H +I ++++ +SL++ YAK
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVA 248
+ +A +FD+M ++VSW+A++ G L+G + I L + M +G V PN
Sbjct: 79 VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138
Query: 249 VLTACSHAGLIDKA 262
+++C G +++
Sbjct: 139 AISSCCDRGRVEEG 152
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 309/516 (59%), Gaps = 38/516 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN+++VG A+N +++AL + R+M +V + D+ T++S+LP
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP----------- 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
A+ + NV MY K +F + K +SWN +I ++N
Sbjct: 250 ------AVSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E ++ + +M +P VS +S++PAC + L LGK++HG I R N+ +
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +F+ M D+VSWTA+I G DA++LF +++ G+
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV L ACSHAGL+++ S F MT Y I P EH A + DLLGRAGK++EAY
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P E VW LL ACRVH + ++ A+K+F + P G YV+LSN YA A R
Sbjct: 468 FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 527
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ ++R M++KG+KK P S +EV + F+ GD+SHP I L L+++M++
Sbjct: 528 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD-----GTTIRIIKNLRVCG 475
GYVPD++ LHDVEEE K+ L HSE+LAIVF ++ T + TIRI KNLR+CG
Sbjct: 588 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICG 647
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
DCH A K IS+I REII+RD +RFH F G CSC
Sbjct: 648 DCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 42 FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
F L VL Y D+ + +H I L N +G L+ YA V + ++F
Sbjct: 43 FLLGQVLDT---YPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P ++ I N +I V NG + EG+K F M ++P H +F ++ AC+ T+ +G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+++HG + G +F+ + L+ MY KCG + AR + D+M D+VSW ++++G A +
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
DA+ + +ME + ++ ++L A S+
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+ +H II N + L+ YA ++ AR +FD++ +++ +I +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + + +F M V+P+ F VL ACS +G I S TK G++ +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFV 177
Query: 282 YAAVADLLGRAGKLQEAYEFISNM 305
+ + G+ G L EA + M
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM 201
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/494 (42%), Positives = 316/494 (63%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D++ + +I A++ E+A + ++ ++ P+ ++LSSVL + V + G
Sbjct: 324 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 383
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH +AI+ G ++++ +G++L++ YAKC ++ S ++F L + +SWN+I+ G Q+
Sbjct: 384 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L F +M A++ V++SS++ ACA ++ Q+H I ++ F+++ I
Sbjct: 444 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 503
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D YAKCG IR A +F + DI+SW A+I G ALHG A DA+ LF++M K V+
Sbjct: 504 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVE 563
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N + FVA+L+ CS GL++ S F+SM D+GI PS EHY + LLGRAG+L +A +
Sbjct: 564 SNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQ 623
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI ++ + P+ VW LLS+C +HKNV L AEKI I+P + YV+LSN YAAA
Sbjct: 624 FIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 683
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
A LR MRN G++K P SW+E+K + +AF G HP IN L+ L + +
Sbjct: 684 LDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSR 743
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGY+PD VLHDV++EQK +L+ HSERLA+ +G++ TP G IRI+KNLR C DCHTA
Sbjct: 744 EGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTA 803
Query: 481 IKFISKIVQREIIV 494
ISKIV+REIIV
Sbjct: 804 FTVISKIVKREIIV 817
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 140/267 (52%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W ++ + N E A + +M KP+ F L+SVL V+ GK IH
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G AI+ D +G +L++MYAKC ++D+ F ++P D I + +I+ Q+ +
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +++ + + P S SS++ AC ++ L GKQ+H I+ G + ++F+ ++L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D YAKC ++ + IF + + VSW +++G + G +A+S+F +M+ + V
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQV 466
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ +VL AC+ I A S+ K
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEK 493
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 139/262 (53%), Gaps = 4/262 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL--PIFADYVDVI 58
MP ++VS+ T++ A+ G +E A + R++ + + F L+++L I D +
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLA 181
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G +H A + G D N +GS LI+ Y+ C+ V D+ +F + KDA+ W ++++
Sbjct: 182 GG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+N + + F +M ++ KP + +S++ A L ++ LGK +HGC I+ D
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +LLDMYAKCG+I+ AR F+ + D++ + +I A A LF ++ +
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 239 VKPNSVAFVAVLTACSHAGLID 260
V PN + +VL AC++ +D
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLD 381
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG----LD---ANVCIGSSLINMYAKCARV 92
DSF + L D G+ +HG+ +R G LD ANV L+NMY K +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANV-----LLNMYGKLGPL 112
Query: 93 EDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+ RLF +P ++ +S+ +++ Q G F+ FR++ + ++++
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA 172
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ L +H C + G D N F+ S L+D Y+ C + A +F+ + D V WT
Sbjct: 173 IAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWT 232
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
A++ + + +A +F +M G KPN A +VL A
Sbjct: 233 AMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 304/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++VSW +I G G + EA+++ R + L+PD F + VL A D+ G
Sbjct: 165 MVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG 224
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I GL NV + +SL++MY KC +E++ +F + KD + W+++I G N
Sbjct: 225 RWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASN 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E ++ F +M ++P + + +CA L L LG G + F N +
Sbjct: 285 GLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG 344
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D YAKCG++ A ++ M D V + AVI G A++G A +F QM K G+
Sbjct: 345 TSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIP 404
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN FV +L C+HAGL+D YFNSM+ D+ + P+ EHY + DLL RAG L EA+
Sbjct: 405 PNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHN 464
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M VW +LL CR+H+ +LA V +++ ++P N G YV+LSN Y+A+RR
Sbjct: 465 LIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRR 524
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +A +R + KGM+K P SW+EV + F+ GD SHP +I E L+ L + +++
Sbjct: 525 WDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKE 584
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY P T+ VL DVEEE+K++ L HSE+LA+ F +I T IR++KNLRVCGDCH A
Sbjct: 585 AGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEA 644
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISK+ REI++RDN+RFH F DG CSC DYW
Sbjct: 645 IKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 158/296 (53%), Gaps = 3/296 (1%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S+ +NT+I G+ + A+++ M + PDSFT S VL A G I
Sbjct: 67 SNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMI 126
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + G D +V + ++++ Y+KC + D+ ++F + VK+ +SW +I GC++ G F
Sbjct: 127 HSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKF 186
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E + FR +L + ++P ++ ACA L L G+ + C+ G N+F+A+SL
Sbjct: 187 REAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSL 246
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMY KCG++ AR +FD M DIV W+A+I G A +G +AI LF +M K V+P+
Sbjct: 247 VDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDC 306
Query: 244 VAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
A V L++C+ G ++ W+ +++ P ++ D + G ++EA
Sbjct: 307 YAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEA 360
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/545 (39%), Positives = 315/545 (57%), Gaps = 31/545 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLVSW+ +I +N +YEEAL + ++M + D + SVL + + VI G
Sbjct: 249 MKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITG 308
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG ++ G++ V + ++LI+MY+ C V + +LF D ISWNS+I+G V+
Sbjct: 309 KLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKC 368
Query: 121 G-------LFD------------------------EGLKFFRQMLIAKIKPRHVSFSSIM 149
G LFD E L F++M I KP S++
Sbjct: 369 GEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVI 428
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC HL L GK +H I +NG N+ + ++L++MY K G + A +F ++ +
Sbjct: 429 SACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVS 488
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+W A+I+G A++G ++ F +M++ GV PN + FVAVL AC H GL+D+ +FNSM
Sbjct: 489 TWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSM 548
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+++ I P+ +HY + DLLGRAG L+EA E I +M P + W LL AC+ + + E
Sbjct: 549 IQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNET 608
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
++ K+ + P++ G V+LSN YA+ W D +R MR G+ KTP CS IE
Sbjct: 609 GERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHG 668
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
+ + F+AGDK+HP I L E+ ++++ EGY PDT+EV D++EE+K+ L+ HSE+
Sbjct: 669 RVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEK 728
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FG+I T IRI+KNLR+C DCHTA K ISK REI+VRD RFHHF+ G CS
Sbjct: 729 LAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCS 788
Query: 510 CGDYW 514
C DYW
Sbjct: 789 CMDYW 793
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 150/334 (44%), Gaps = 71/334 (21%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D+VSWN+++ G G EEA ++ +M
Sbjct: 189 VLDMVSWNSMLAGYVLVGNVEEAKDVYDRMP----------------------------- 219
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+ NV +S+I ++ K VE++ +LF + KD +SW+++I+ QN +
Sbjct: 220 ----------ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEM 269
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++E L F++M I V S++ AC+ L + GK +HG +++ G + + + ++
Sbjct: 270 YEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNA 329
Query: 183 LLDMYA-------------------------------KCGNIRLARCIFDKMDLHDIVSW 211
L+ MY+ KCG I AR +FD M D VSW
Sbjct: 330 LIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSW 389
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+A+I G A + + LF++M+ +G KP+ V+V++AC+H +D+ + ++ +
Sbjct: 390 SAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIR 448
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+ + + ++ + G +++A E +
Sbjct: 449 KNGLKINIILGTTLINMYMKLGCVEDALEVFKGL 482
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 39/245 (15%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT++ G + +A+ + + M N+ D++T + + + GK I + ++
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLK 154
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G D++V I ++LINMYA C + D+ ++F V D +SWNS++AG V G +E
Sbjct: 155 VGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDV 214
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
+ +M P + N+ ++S++ ++ K
Sbjct: 215 YDRM------P---------------------------------ERNVIASNSMIVLFGK 235
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
GN+ A +F++M D+VSW+A+I + +A+ LF++M +G+ + V ++V
Sbjct: 236 KGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSV 295
Query: 250 LTACS 254
L+ACS
Sbjct: 296 LSACS 300
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 37 LKPDSFTLSSVL--PIFADYV----DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
K +FTL L PI ++ ++ + +I I G + S L+ +
Sbjct: 13 FKIPTFTLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELP 72
Query: 91 --RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+ S+++F + + N+++ G +Q + + ++ ML + + + ++ +
Sbjct: 73 FININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPIL 132
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+C+ GK + +++ GFD +++I ++L++MYA CGN+ AR +FD + D+
Sbjct: 133 FQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDM 192
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSW +++ G L GN +A ++++M + N +A +++ G +++A FN
Sbjct: 193 VSWNSMLAGYVLVGNVEEAKDVYDRMPER----NVIASNSMIVLFGKKGNVEEACKLFNE 248
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPT---ENVWLTLLSAC 321
M + ++ ++A+ + +EA M+A E V L++LSAC
Sbjct: 249 MKQKDLVS-----WSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSAC 299
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/509 (41%), Positives = 317/509 (62%), Gaps = 14/509 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D+VSWN +I G A G Y++AL + ++M N+KPD T+++V+ A + G
Sbjct: 167 IPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y+KC VE + L L KD ISWN++I G
Sbjct: 227 RQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHM 286
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG--------KQLHGCIIRNG 172
L+ E L F++ML + P V+ SI+PACAHL + +G K+L G ++ N
Sbjct: 287 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNA 346
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLF 231
+ +SL+DMYAKCG+I A + D + + +W A+I G A+HG A+ A +F
Sbjct: 347 SS----LRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIF 402
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
+M K+G++P+ + FV +L+ACSH+G++D + F SM +DY I P EHY + DLLG
Sbjct: 403 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGH 462
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
+G +EA E I+ M P +W +LL AC++H N+EL A+K+ I+P N G+YV+L
Sbjct: 463 SGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLL 522
Query: 352 SNTYAAARRWKDAASLRVFMRNKGM-KKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
SN YA A +W + +R + +KGM KK P CS IE+ + + F+ GDK HP I
Sbjct: 523 SNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGM 582
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L+E+ +E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KN
Sbjct: 583 LEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 642
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSR 499
LRVC +CH A K ISKI +REII RD +R
Sbjct: 643 LRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 195/389 (50%), Gaps = 38/389 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + + WN + G A + AL + M ++ L P+ FT +L A +G
Sbjct: 35 IPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEG 94
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVED--------SHR--------------- 97
++IHG+ ++ G D ++ + +SLI+MYA+ R+ED SHR
Sbjct: 95 QQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASR 154
Query: 98 --------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+F +P+KD +SWN++I+G + G + + L+ F++M+ +KP + ++++
Sbjct: 155 GYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVV 214
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
ACA ++ LG+Q+H I +GF N+ I ++L+D+Y+KCG + A + + + D++
Sbjct: 215 SACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVI 274
Query: 210 SWTAVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-W--SY 265
SW +I G H N + +A+ LF++M + G PN V +++L AC+H G ID W Y
Sbjct: 275 SWNTLI-GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 333
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+ K + + ++ D+ + G + A + + + + W ++ +H
Sbjct: 334 IDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHG 393
Query: 326 NVELAGKVAEKIFM--IDPNNMGAYVILS 352
A + ++ I+P+++ +LS
Sbjct: 394 RANAAFDIFSRMRKNGIEPDDITFVGLLS 422
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +P + + WN + G + LK + M+ + P +F ++ +CA T
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
G+Q+HG +++ GFD ++++ +SL+ MYA+ G + A+ +FD+ D+VS+TA+I G
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 218 -------------------------NAL------HGNAHDAISLFEQMEKDGVKPNSVAF 246
NA+ GN A+ LF++M K VKP+
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
V++AC+ +G I+ +S D+G + + A+ DL + G+++ A E + +
Sbjct: 211 ATVVSACAQSGSIELG-RQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGL 268
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/530 (40%), Positives = 319/530 (60%), Gaps = 16/530 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWNT++ GL + G AL + M + + T S L + + V G
Sbjct: 482 LPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELG 541
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--------------- 105
+++HG ++ G D++ I SSL+ MY KC R++ + + +P+
Sbjct: 542 RQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPK 601
Query: 106 -DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+SW S+++G V NG +++GLK FR M+ + + ++I+ ACA+ L G+ +
Sbjct: 602 AGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHV 661
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
H + + G + ++ SSL+DMY+K G++ A +F + + +IV WT++I G ALHG
Sbjct: 662 HAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQG 721
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
AI LFE+M G+ PN V F+ VL ACSHAGLI++ YF M Y I P EH +
Sbjct: 722 MHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTS 781
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNN 344
+ DL GRAG L + FI +VW + LS+CR+HKNVE+ V+E + + P++
Sbjct: 782 MVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSD 841
Query: 345 MGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFY 404
GAYV+LSN A+ RW +AA +R M +G+KK P SWI++K++ + FV GD+SHP
Sbjct: 842 PGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQD 901
Query: 405 HRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTT 464
I L L+ R+++ GY D K V+ DVEEEQ + L+ +HSE+LA+VFGII T + T
Sbjct: 902 DEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTP 961
Query: 465 IRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IRIIKNLR+C DCH IK+ S+++ REIIVRD RFHHF+ G CSCGDYW
Sbjct: 962 IRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 176/373 (47%), Gaps = 53/373 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + +W +I G AR G E N+ R+M P+ +TLSSVL + ++ G
Sbjct: 350 IPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLG 409
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL------------------- 101
K +H + +R+G+D +V +G+S++++Y KC E + RLF L
Sbjct: 410 KGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRA 469
Query: 102 ------------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
LP KD +SWN+I+ G +Q G L+ M+ + V+FS +
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIAL 529
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH--- 206
+ L+ + LG+QLHG +++ GFD + FI SSL++MY KCG + A I + L
Sbjct: 530 ILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLR 589
Query: 207 -------------DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
IVSW +++ G +G D + F M ++ V + +++AC
Sbjct: 590 KGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEFISNMHAGPTE 311
++AG+++ + K I + Y +++ D+ ++G L +A+ + P
Sbjct: 650 ANAGILEFGRHVHAYVQK---IGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNE-PNI 705
Query: 312 NVWLTLLSACRVH 324
+W +++S +H
Sbjct: 706 VMWTSMISGYALH 718
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 42 FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
FTLS+ P +H +++G + + L+ +YAK + + +LF
Sbjct: 299 FTLSNSPPPLG---------TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDE 349
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P ++ +W +I+G + G + FR+M P + SS++ C+ L LG
Sbjct: 350 IPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLG 409
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K +H ++RNG D ++ + +S+LD+Y KC A +F+ M+ D+VSW +I
Sbjct: 410 KGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRA 469
Query: 222 GNAHDAISLFEQME-KDGVKPNSV 244
G+ ++ +F ++ KD V N++
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTI 493
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
LH ++NG + A+ LL +YAK N+ A+ +FD++ + +WT +I G A G+
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ +LF +M+ G PN +VL CS
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCS 401
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/507 (41%), Positives = 315/507 (62%), Gaps = 2/507 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN +I G ++ A + M + + K D+ T S VL A + ++ +IH + +
Sbjct: 73 WNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIV 132
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
R G A+ +G++L+++YAK ++ + ++F + +D SWN++I+G Q E L
Sbjct: 133 RKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALS 192
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F++M I KP +S + ACA L G+++HG I FD N + + ++DMYA
Sbjct: 193 LFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYA 252
Query: 189 KCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG + A +F+ M DIV+W +IM A+HG A+ LFE+M++ GV P+ V+++
Sbjct: 253 KCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYL 312
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
AVL AC+H GL+++ + FNSM ++ G+ P+ +HY +V DLLGRAG+L EAY+ +++M
Sbjct: 313 AVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPT 371
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P +W TLL A R H+NVE+A V+ K+ + N+ G +V+LSN YAA RW D +
Sbjct: 372 VPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRV 431
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M+N+ +KK P S+IE + F DKSH + I L E+ R+++ GYV +T
Sbjct: 432 REAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAET 491
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
VLHD+ EE K+N+L +HSE+LA+ FG+I T +GT I++IKNLR+CGDCH IK ISKI
Sbjct: 492 SFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKI 551
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
REIIVRD RFH F++G CSC DYW
Sbjct: 552 YDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ SWN +I G A+ EAL++ ++M KP+ ++ L A D +G
Sbjct: 166 MVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEG 225
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
++IHGY D N + + +I+MYAKC V+ ++ +F + KD ++WN++I
Sbjct: 226 EKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAM 285
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L+ F +M + + P VS+ +++ AC H + G +L + G N+
Sbjct: 286 HGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKH 345
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S++D+ + G + A I + M + DIV W ++ + H N A ++ ++ + G
Sbjct: 346 YGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMG 405
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/521 (40%), Positives = 330/521 (63%), Gaps = 8/521 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V L+ NT I L +N +AL ++ +M + FT+SSVL A +++
Sbjct: 111 MLVKSLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILEC 170
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H ++I+ +D+N + ++L+++YAKC+ ++D+ ++F +P K+A++W+S++AG VQN
Sbjct: 171 MQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 230
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE L F + + SS + ACA L TL GKQ+H ++GF N+++A
Sbjct: 231 GFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVA 290
Query: 181 SSLLDMYAKCGNIRLARCIFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SSL+DMYAKCG IR A +F+ +++ IV W A+I G A H A +A+ LFE+M++ G
Sbjct: 291 SSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGF 350
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V +V+VL ACSH GL ++ YF+ M + + ++PS HY+ + D+LGRAG +Q+AY
Sbjct: 351 FPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAY 410
Query: 300 EFISNMHAGPTENVW-----LTLL--SACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
+ I M T ++W L+ L ++CR++ N+E A A+ +F ++PNN G +++L+
Sbjct: 411 DLIGRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLA 470
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YAA ++ + A R +R ++K SWIE+KNK ++F G+++HP L
Sbjct: 471 NIYAANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLD 530
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
L+ +++ Y DT LHDVEE +K LL +HSE+LAI FG++C P IRIIKNLR
Sbjct: 531 NLVVELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLR 590
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+CGDCHT +K +SK REIIVRD +RFHHF+DG CSCG++
Sbjct: 591 ICGDCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 1/294 (0%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP 103
L +L + A + G+ H IR GL+ ++ + LINMY+KC+ V + + +
Sbjct: 53 LHYLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEML 112
Query: 104 VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ 163
VK I N+ I QN + LK +M + SS++ CA + Q
Sbjct: 113 VKSLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQ 172
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
LH I+ D N F+ ++LL +YAKC +I+ A +F+ M + V+W++++ G +G
Sbjct: 173 LHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGF 232
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA 283
+A+ LF + G + + ++AC+ + + ++M+ G + +
Sbjct: 233 HDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEG-KQVHAMSHKSGFGSNIYVAS 291
Query: 284 AVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
++ D+ + G ++EAY + +W ++S H + A + EK+
Sbjct: 292 SLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKM 345
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/521 (40%), Positives = 318/521 (61%), Gaps = 12/521 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D+VSWN ++ N ++A+ + ++M L+PD T S+L + DV G+
Sbjct: 225 LRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRV 281
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + L+ NV +G++L++MYAKC ++ +F + + ISW +II+ V+ L
Sbjct: 282 LHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRL 341
Query: 123 FDEGLKFFRQML-------IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
E F+QML ++KP ++F +I+ ACA ++ L GK + G
Sbjct: 342 VAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSS 401
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ + ++++++Y KCG I AR IFD + D+ W A+I A G +H+A+ LF +M
Sbjct: 402 DKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM 461
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY-GIAPSFEHYAAVADLLGRAG 293
E +GV+P+S +FV++L ACSH GL D+ SYF SMT +Y + + +H+ VADLLGR G
Sbjct: 462 EMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGG 521
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
+L+EA EF+ + P W +LL+ACR H++++ A +VA K+ ++P YV LSN
Sbjct: 522 RLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSN 581
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YA ++W A +R FM +G+KK S IE+ + F GD +HP I E L +
Sbjct: 582 IYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAK 641
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
L +M++ GYVPDTK VLH V+E++K+ LL+ HSERLAI G+I TP GT +R+ KNLRV
Sbjct: 642 LHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRV 701
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCHTA K ISKI R+I+VRD +RFH F+DGKCSC DYW
Sbjct: 702 CSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 141/256 (55%), Gaps = 8/256 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L SW ++ A +G +E L + +M ++PD+ T + L D + G IH
Sbjct: 22 NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIH 81
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGC-VQNGL 122
+ L+ + + ++L+NMY KC + + R+F + ++ ISW SI+AG +G
Sbjct: 82 QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISW-SIMAGAHALHGN 140
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR ML+ IK + +I+ AC+ + G+ +H CI +GF+ + +A++
Sbjct: 141 VWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANA 200
Query: 183 LLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ MY +CG + AR +FD MD L D+VSW ++ + DAI L+++M+ ++
Sbjct: 201 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LR 257
Query: 241 PNSVAFVAVLTACSHA 256
P+ V +V++L+ACS A
Sbjct: 258 PDKVTYVSLLSACSSA 273
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 133/277 (48%), Gaps = 8/277 (2%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MYA C D+ F L ++ SW ++A +G E L+ +M ++P V+
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F + + +C +L G ++H ++ + + + ++++LL+MY KCG++ A+ +F KM+
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 205 -LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+++SW+ + +ALHGN +A+ F M G+K A V +L+ACS L+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG- 179
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
+S G AV + GR G ++EA + M + V ++ + V
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 324 HKNVELAGKVAEKIF---MIDPNNMGAYVILSNTYAA 357
H + GK A +++ + P+ + +LS +A
Sbjct: 240 HND---RGKDAIQLYQRMQLRPDKVTYVSLLSACSSA 273
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-------GNVNLKPDSFTLSSVLPIFAD 53
M ++SW T+I R L EA ++ +QM + +KPD+ ++L AD
Sbjct: 321 MEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACAD 380
Query: 54 YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISW 110
+ +GK + A GL ++ +G++++N+Y KC +E++ R+F C P D W
Sbjct: 381 VSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRP--DVQLW 438
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
N++IA Q G E LK F +M + ++P SF SI+ AC+H GK +
Sbjct: 439 NAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTT 498
Query: 171 NGFDDNMFIA--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVI 215
+ I + D+ + G ++ A +K+ + D V+WT+++
Sbjct: 499 EYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 546
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/511 (40%), Positives = 307/511 (60%), Gaps = 13/511 (2%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+VSW +I G ++ + EALN+ ++M + +K D+ +S + A + +G++I
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + G ++ IG++L+++YA+C +V +++ F + KD +SWNS+++G Q+G F
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L F QM A ++ +F S + A A++ + +GKQ+HG I + G+D ++++L
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNAL 681
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ +YAKCG I D +SW ++I G + HG +A+ LFE M++ V PN
Sbjct: 682 ITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNH 728
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V FV VL+ACSH GL+D+ SYF SM++ + + P EHYA V DLLGR+G L A F+
Sbjct: 729 VTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVE 788
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P VW TLLSAC VHKN+++ A + ++P + YV++SN YA + +W
Sbjct: 789 EMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDC 848
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
R M+++G+KK P SW+EV N +AF AGD++HP I E L+ L R + GY
Sbjct: 849 RDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGY 908
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP +L D E QK HSERLAI FG++ T + + KNLRVC DCH IK
Sbjct: 909 VPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKH 968
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKI R IIVRD+ RFHHF+ G CSC DYW
Sbjct: 969 VSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 204/397 (51%), Gaps = 37/397 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VS+N++I GLA+ G AL + ++M KPD T++S+L A + G
Sbjct: 312 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 371
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+ H YAI+ G+ +++ + SL+++Y KC+ ++ +H F + G + N
Sbjct: 372 KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------LCYGQLDN 418
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + F QM I I P ++ SI+ C L LG+Q+H +++ GF N++++
Sbjct: 419 --LNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS 476
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAK G + A IF ++ +D+VSWTA+I G H +A++LF++M+ G+K
Sbjct: 477 SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIK 536
Query: 241 PNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+++ F + ++AC+ +D+ A S + + D I A+ L R GK+
Sbjct: 537 SDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN------ALVSLYARCGKV 590
Query: 296 QEAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+EAY ++A +NV W +L+S +G E + + N I S T
Sbjct: 591 REAYAAFDQIYA--KDNVSWNSLVSG------FAQSGYFEEALNIFAQMNKAGLEINSFT 642
Query: 355 YAAA-RRWKDAASLRVFMRNKGM-KKTPACSWIEVKN 389
+ +A + A++R+ + GM +KT S EV N
Sbjct: 643 FGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN 679
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 145/274 (52%), Gaps = 1/274 (0%)
Query: 24 EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLI 83
++ I QM + P+ FT S+L G++IH ++ G NV + S LI
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480
Query: 84 NMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHV 143
+MYAK +++ + ++F L D +SW ++IAG Q+ F E L F++M IK ++
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
F+S + ACA + L G+Q+H +G+ D++ I ++L+ +YA+CG +R A FD++
Sbjct: 541 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI 600
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D VSW +++ G A G +A+++F QM K G++ NS F + ++A ++ + +
Sbjct: 601 YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANV-RIG 659
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ M + G E A+ L + G + +
Sbjct: 660 KQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 199/446 (44%), Gaps = 50/446 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIK 59
MP+ L WN + L + R+M N++ D + VL + V
Sbjct: 123 MPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRF 182
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH I G +++ I + LI++Y K + + ++F L +D++SW ++I+G Q
Sbjct: 183 VEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQ 242
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG +E + F Q+ ++ AC + GKQLHG +++ GF ++
Sbjct: 243 NGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYV 288
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ +Y++ GN+ A IF M D VS+ ++I G A G + A++LF++M D
Sbjct: 289 CNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ 348
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFN-----SMTKDYGIAPS-FEHYAAVADL----- 288
KP+ V ++L+AC+ G + + + MT D + S + Y +D+
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408
Query: 289 ----LGRAGKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAEKIFMID 341
G+ L ++++ + M P + + ++L C +L ++ ++
Sbjct: 409 FFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG 468
Query: 342 PN-NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS 400
N+ +L + YA + A L++F R +K+ SW A +AG
Sbjct: 469 FQFNVYVSSVLIDMYAKHGKLDHA--LKIFRR---LKENDVVSWT-------AMIAGYTQ 516
Query: 401 HPFYHRINEALKELLERMEQEGYVPD 426
H + EAL L + M+ +G D
Sbjct: 517 HD---KFTEALN-LFKEMQDQGIKSD 538
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 30/268 (11%)
Query: 79 GSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 138
G LI+ Y + + +F +P++ WN I + L FR+ML +
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159
Query: 139 KPRHVSFSSIMPACA-HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ F+ ++ C+ + + +Q+H I +GF+ + FI + L+D+Y K G + A+
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME---------------------K 236
+F+ + D VSW A+I G + +G +A+ LF Q+ K
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLK 279
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G + A++T S +G + A F+ M++ ++ Y ++ L + G +
Sbjct: 280 QGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS-----YNSLISGLAQQGYIN 334
Query: 297 EAYEFISNMH---AGPTENVWLTLLSAC 321
A M+ P +LLSAC
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSAC 362
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/515 (41%), Positives = 318/515 (61%), Gaps = 6/515 (1%)
Query: 5 DLVSWNTVIVGLARNGLY----EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
D+V +NT++ G AR G EEA + +M + PD++T S+L A +G
Sbjct: 98 DVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEG 157
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HG A++ G + + +LINMYA+C V + +F + + +S+N++I V++
Sbjct: 158 RQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRS 217
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L E L FR+M +KP V+ S++ ACA L L LG+ +H I + D + +
Sbjct: 218 SLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVN 277
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG++ A +F M+ D +W+ +++ A HG +AIS+FE+M+K G+K
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+ VL ACSH+G++ + YF+SM ++YGI +HY V DLL R+G+L+ AY+
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYK 396
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W TLLSAC H +V++ +V E+I +D ++ G YVI SN A R
Sbjct: 397 FIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGR 456
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ +R M KG+ K P CS IE+ N + F AGD SHP + E++E+++
Sbjct: 457 WEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKL 516
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP+T V H ++ EE+K L YHSE+LAI FG++ T GTT+RI+KNLRVC DCH+
Sbjct: 517 VGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHS 576
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S + R II+RD +RFHHFEDG CSCGDYW
Sbjct: 577 MAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +W+ ++V A +G EA+++ +M +KPD T VL + V +G
Sbjct: 300 MESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEG 359
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
+ +G+ + + + ++ A+ ++E +++ LP+K AI W ++++ C
Sbjct: 360 LQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 120 NGLFDEGLKFFRQML 134
+G D G + F ++L
Sbjct: 420 HGDVDMGKRVFERIL 434
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 154 HLTTLHLGKQLHGCIIR--NGFDDNMFIASSLLDMYAKCG-----NIRLARCIFDKMD-L 205
H T+L QLH ++ G + + LL + + G ++ AR +FD++
Sbjct: 37 HCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHP 96
Query: 206 HDIVSWTAVIMGNALHGN----AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
D+V + ++ G A G A +A +F +M ++GV P++ FV++L AC+ A
Sbjct: 97 GDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 308/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +V+W + G +G + EA+++ ++M + +KPDS+ + VL D+ G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y + N + ++L+N+YAKC ++E + +F + KD ++W+++I G N
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
EG++ F QML +KP S + +CA L L LG+ I R+ F N+F+A
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + +F +M DIV A I G A +G+ + ++F Q EK G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +L C HAGLI +FN+++ Y + + EHY + DL GRAG L +AY
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P VW LLS CR+ K+ +LA V +++ ++P N G YV LSN Y+ R
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +AA +R M KGMKK P SWIE++ K + F+A DKSHP +I L++L M
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VP T+ V DVEEE+K+ +L YHSE+LA+ G+I T G IR++KNLRVCGDCH
Sbjct: 592 MGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEV 651
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K ISKI +REI+VRDN+RFH F +G CSC DYW
Sbjct: 652 MKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I G N L+ E L++ + L FT VL G ++H +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + +V +SL+++Y+ R+ D+H+LF +P + ++W ++ +G +G E +
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F++M+ +KP ++ AC H+ L G+ + + N F+ ++L+++YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG + AR +FD M DIV+W+ +I G A + + I LF QM ++ +KP+ + V
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
L++C+ G +D W S+ + + A+ D+ + G + +E M
Sbjct: 319 FLSSCASLGALDLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH I H L + + + L+ + + S+ LF + +NS+I G V N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
LF E L F + + +F ++ AC ++ LG LH +++ GF+ ++
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SLL +Y+ G + A +FD++ +V+WTA+ G G +AI LF++M + GVK
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S V VL+AC H G +D M + SF + +L + GK+++A
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKMEKARS 268
Query: 301 FISNM 305
+M
Sbjct: 269 VFDSM 273
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 325/562 (57%), Gaps = 48/562 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV---RQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + SWNT+I G + + + + I M + ++P+ FT SVL A +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED----------------------- 94
+GK+IHG A+++G + + S+L+ MY C ++D
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 95 ----------------------SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ LF + + +SWN++I+G NG F + ++ FR+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M I+P +V+ S++PA + L +L LG+ LH +G + + S+L+DMY+KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
I A +F+++ ++++W+A+I G A+HG A DAI F +M + GV+P+ VA++ +LTA
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
CSH GL+++ YF+ M G+ P EHY + DLLGR+G L EA EFI NM P +
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 313 VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
+W LL ACR+ NVE+ +VA + + P++ GAYV LSN YA+ W + + +R+ M+
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 373 NKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLH 432
K ++K P CS I++ + FV D SHP IN L E+ +++ GY P T +VL
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLL 564
Query: 433 DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREI 492
++EEE K+N+L+YHSE++A FG+I T G IRI+KNLR+C DCH++IK ISK+ +R+I
Sbjct: 565 NLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624
Query: 493 IVRDNSRFHHFEDGKCSCGDYW 514
VRD RFHHF+DG CSC DYW
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 56/281 (19%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL----KFFRQMLIAKIKPRHVSFSSIMP 150
+H++F +P ++ SWN+II G ++ D+ L F+ M ++P +F S++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-------------------- 190
ACA + GKQ+HG ++ GF + F+ S+L+ MY C
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 191 -------------------------GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
G+ + AR +FDKM +VSW +I G +L+G
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
DA+ +F +M+K ++PN V V+VL A S G ++ + + +D GI +A+
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSAL 315
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
D+ + G +++A + P ENV W +++ +H
Sbjct: 316 IDMYSKCGIIEKAIHVFERL---PRENVITWSAMINGFAIH 353
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/511 (40%), Positives = 321/511 (62%), Gaps = 8/511 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W + +G +RNG EAL + R M + +KP +F S L +D + + G+ IH +
Sbjct: 143 WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIV 202
Query: 69 RHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+H + +A+ + ++L+ +Y + ++ ++F +P ++ +SWN++IAG G E L
Sbjct: 203 KHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETL 262
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FR M + ++ ++++P CA +T LH GK++HG I+++ + ++ + +SL+DMY
Sbjct: 263 SAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMY 322
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG I +FD+M D+ SW ++ G +++G H+A+ LF++M + G++PN + FV
Sbjct: 323 AKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFV 382
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
A+L+ CSH+GL + F+++ +D+G+ PS EHYA + D+LGR+GK EA N+
Sbjct: 383 ALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPM 442
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P+ ++W +LL++CR++ NV LA VAE++F I+PNN G YV+LSN YA A W+D +
Sbjct: 443 RPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRV 502
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS----HPFYHRINEALKELLERMEQEGY 423
R M GMKK CSWI++K+K + FVAG S Y +I EL ++ GY
Sbjct: 503 REMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKI---WNELSNAVKNLGY 559
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP+T VLHD+ EE K + HSERLA VF +I T G IRI KNLRVC DCH+ +K
Sbjct: 560 VPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKA 619
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SK+ +R I++RD +RFHHFE+G CSC DYW
Sbjct: 620 VSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 10/282 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSWNT+I G A G E L+ R M + TL+++LP+ A + G
Sbjct: 237 MPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSG 296
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHG ++ +A+V + +SL++MYAKC + ++F + KD SWN+++AG N
Sbjct: 297 KEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSIN 356
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L F +M+ I+P ++F +++ C+H GK+L ++++ G ++
Sbjct: 357 GQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEH 416
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+D+ + G A + + + + S W +++ L+GN A + E++ +
Sbjct: 417 YACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFE-- 474
Query: 239 VKPNSVA-FVAVLTACSHAGLID-----KAWSYFNSMTKDYG 274
++PN+ +V + ++AG+ + + M KD G
Sbjct: 475 IEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAG 516
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 146/301 (48%), Gaps = 11/301 (3%)
Query: 60 GKEIHGYAIR--HGLDANVCIGSSLINMYAKCARVEDSHRLFCL---LPVKDAISWNSII 114
G+++H + +R + + N + + LI +Y+ C RV ++ R+F + P ++ + W ++
Sbjct: 89 GRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPV-WVAMA 147
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G +NG E L +R ML +KP + +FS + AC+ L +G+ +H I+++
Sbjct: 148 IGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVG 207
Query: 175 D-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ + + ++LL +Y + G +F++M ++VSW +I G A G + +S F
Sbjct: 208 EADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRV 267
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M+++G+ + + +L C+ + + K A ++ D+ + G
Sbjct: 268 MQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNA-DVPLLNSLMDMYAKCG 326
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVIL 351
++ + MH+ + W T+L+ ++ + A + +++ + I+PN + +L
Sbjct: 327 EIGYCEKVFDRMHSKDLTS-WNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALL 385
Query: 352 S 352
S
Sbjct: 386 S 386
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/517 (41%), Positives = 318/517 (61%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP + V+W+ +I G +A + + M G L P S ++S L A +
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHL 356
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+++H + G+ A++ G+SL++MYAK ++ + LF + VKD +S++++++G
Sbjct: 357 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 416
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG +E F++M ++P + S++PAC+HL L G+ HG +I G
Sbjct: 417 VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 476
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++L+DMYAKCG I L+R +F+ M DIVSW +I G +HG +A +LF +M
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 536
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G P+ V F+ +L+ACSH+GL+ + +F+ M YG+ P EHY + DLL R G L E
Sbjct: 537 GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDE 596
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI +M VW+ LL ACRV+KN++L KV+ I + P G +V+LSN Y+A
Sbjct: 597 AYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 656
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R+ +AA +R+ + +G KK+P CSWIE+ +AFV GD+SHP I L +L
Sbjct: 657 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVG 716
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GY PDT VL D+EEE+K+ L HSE+LAI +GI+ + TI + KNLRVCGDC
Sbjct: 717 IKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDC 776
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK IS + +R IIVRD +RFHHF++G+CSCGD+W
Sbjct: 777 HTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 174/376 (46%), Gaps = 62/376 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEA--LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
+P D+ ++N +I + + A L++ R+M + P+++T L + D
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+ IH +AI GL A++ + ++L++MY KCA + D+ +F +P +D ++WN+++AG
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 119 QNGLFDEGLKFF--RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR------ 170
+G++ + QM + +++P + +++P A L G +H IR
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSN 262
Query: 171 ----NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
+ D + + ++LLDMYAKCG++ AR +FD M + V+W+A+I G L
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQ 322
Query: 227 AISLFEQMEKDG---VKPNSVAFVAVLTAC------------------------------ 253
A LF+ M G + P S+A + L AC
Sbjct: 323 AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380
Query: 254 -----SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA- 307
+ AGLID+A + F+ M ++ Y+A+ + G+ +EA+ M A
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQAC 435
Query: 308 --GPTENVWLTLLSAC 321
P ++L+ AC
Sbjct: 436 NVEPDAATMVSLIPAC 451
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNG--LFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+ +H LF +P D ++N +I + +GL +R+ML ++ P + +F +
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC+ L H G+ +H I G ++F++++LLDMY KC + A IF M D+V
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 210 SWTAVIMGNALHGNAHDAIS--LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+W A++ G A HG H A++ L QM+ ++PN+ VA+L + G + + S
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/517 (41%), Positives = 318/517 (61%), Gaps = 5/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP + V+W+ +I G +A + + M G L P S ++S L A +
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHL 356
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+++H + G+ A++ G+SL++MYAK ++ + LF + VKD +S++++++G
Sbjct: 357 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 416
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG +E F++M ++P + S++PAC+HL L G+ HG +I G
Sbjct: 417 VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 476
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++L+DMYAKCG I L+R +F+ M DIVSW +I G +HG +A +LF +M
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 536
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G P+ V F+ +L+ACSH+GL+ + +F+ M YG+ P EHY + DLL R G L E
Sbjct: 537 GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 596
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI +M VW+ LL ACRV+KN++L KV+ I + P G +V+LSN Y+A
Sbjct: 597 AYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 656
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R+ +AA +R+ + +G KK+P CSWIE+ +AFV GD+SHP I L +L
Sbjct: 657 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVG 716
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GY PDT VL D+EEE+K+ L HSE+LAI +GI+ + TI + KNLRVCGDC
Sbjct: 717 IKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDC 776
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HT IK IS + +R IIVRD +RFHHF++G+CSCGD+W
Sbjct: 777 HTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 174/376 (46%), Gaps = 62/376 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEA--LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
+P D+ ++N +I + + A L++ R+M + P+++T L + D
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+ IH +AI GL A++ + ++L++MY KCA + D+ +F +P +D ++WN+++AG
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 119 QNGLFDEGLKFF--RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR------ 170
+G++ + QM + +++P + +++P A L G +H IR
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPN 262
Query: 171 ----NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
+ D + + ++LLDMYAKCG++ AR +FD M + V+W+A+I G L
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQ 322
Query: 227 AISLFEQMEKDG---VKPNSVAFVAVLTAC------------------------------ 253
A LF+ M G + P S+A + L AC
Sbjct: 323 AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380
Query: 254 -----SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA- 307
+ AGLID+A + F+ M ++ Y+A+ + G+ +EA+ M A
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQAC 435
Query: 308 --GPTENVWLTLLSAC 321
P ++L+ AC
Sbjct: 436 NVEPDAATMVSLIPAC 451
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNG--LFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+ +H LF +P D ++N +I + +GL +R+ML ++ P + +F +
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC+ L H G+ +H I G ++F++++LLDMY KC + A IF M D+V
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 210 SWTAVIMGNALHGNAHDAIS--LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+W A++ G A HG H A++ L QM+ ++PN+ VA+L + G + + S
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/518 (41%), Positives = 313/518 (60%), Gaps = 7/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWN +I G ++A ++ +M + PD +T SS+L A + G
Sbjct: 139 MDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDG 198
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H G D + + ++LI+MY +C +E + R F + K+ +WN+++A Q
Sbjct: 199 RMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQ- 257
Query: 121 GLFDEG---LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
FD+G L ++ ML+ P +FSS++ +CA L L GK +H C GF+ ++
Sbjct: 258 --FDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDV 315
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L++MYAKCG++ A+ FD + D+VSW+A+I +A HG+A +A+ L M
Sbjct: 316 ILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQ 375
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ N V +VL ACSH G + + YF +++D+GI E+ DLLGRAG L+E
Sbjct: 376 GIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKE 435
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + M + +TLL C+VH +V ++I ++P N G+YV+L+N YAA
Sbjct: 436 AEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAA 495
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW D A LR +MR KG+K+ CS IE ++K Y F GD S+P I L+ L R
Sbjct: 496 AGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSR 555
Query: 418 M-EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
M E+EGYVPDT++V HDV +++K+ LL +HSE++A+ FG+I +P G+T+RIIKNLRVC D
Sbjct: 556 MKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSD 615
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHT K SKI R IIVRD +RFHHFE G CSCGDYW
Sbjct: 616 CHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 38/356 (10%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SW+ ++ +N +Y+EAL + ++M + D++TLSSVL +DV +G+ + A
Sbjct: 15 SWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMVQRKA 74
Query: 68 IRHGLDANVCIGSSLINMYAKCARVE------------------------------DSHR 97
G + +V + +SLI+++AKC +E DS
Sbjct: 75 EELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSKS 134
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF + VKD +SWN++IA G + F +M P +FSSI+ ACA
Sbjct: 135 LFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKR 194
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G+ LH I GFD + + ++L+ MY +CG++ AR F ++ ++ +W ++
Sbjct: 195 LEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAA 254
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A DA+ L++ M +G P+ F +V+ +C+ G + + + + + G
Sbjct: 255 YAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGAL-REGKFIHECSTSCGFEK 313
Query: 278 SFEHYAAVADLLGRAGKLQEA---YEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
A+ ++ + G L +A ++ ISN W +++A H + E A
Sbjct: 314 DVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS----WSAMIAASAQHGHAEEA 365
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 32/256 (12%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ ++F + ++A SW+ ++ VQN ++ E L+ +++M+ +I + SS++ AC
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK------------------------- 189
L + G+ + GF+ ++ +A+SL+ ++AK
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120
Query: 190 -----CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
CG+++ ++ +F MD+ D+VSW A+I L+G+ DA SLF +M G P+
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L AC+ ++ +T G F + + R G L+ A + +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITA-RGFDRDFAMQNNLISMYTRCGSLESARRYFYS 239
Query: 305 MHAGPTENVWLTLLSA 320
+ W T+L+A
Sbjct: 240 IEKKEL-GAWNTMLAA 254
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/515 (39%), Positives = 325/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V +N++ G +R E ++ ++ + PD++T S+L A + +G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++ GLD NV + +LINMY +C V+ + +F + + +N++I G +
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FR+M +KP ++ S++ +CA L +L LGK +H ++ F + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DM+AKCG++ A IF+KM D +W+A+I+ A HG A ++ +FE+M + V+
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH G +++ YF+ M +GI PS +HY ++ DLL RAG L++AYE
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W LL+AC H N++LA KV+E+IF +D ++ G YVILSN YA ++
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ SLR M+++ K P CS IEV N + F +GD +++ AL E+++ ++
Sbjct: 449 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT V+H ++ +++K+ L YHSE+LAI FG++ TP GTTIR++KNLRVC DCH
Sbjct: 509 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 568
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS I R++++RD RFHHFEDGKCSCGD+W
Sbjct: 569 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 66/307 (21%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
Q+ I++ +D F+A L++ + ++ AR +F+ M DIV + ++ G +
Sbjct: 47 QIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA----------------GLIDKAW 263
N + SLF ++ +DG+ P++ F ++L AC+ A GL D +
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 264 ---SYFNSMTK-----------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA-- 307
+ N T+ D + P Y A+ R + EA M
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 308 -GPTENVWLTLLSACRVHKNVELAG---KVAEKIFMIDPNNMGAYV----ILSNTYAAAR 359
P E L++LS+C + +++L K A+K ++ YV L + +A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK------HSFCKYVKVNTALIDMFAKCG 279
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
DA S+ MR K T A S + V AYA H E + ERM
Sbjct: 280 SLDDAVSIFEKMR---YKDTQAWSAMIV---AYA----------NHGKAEKSMLMFERMR 323
Query: 420 QEGYVPD 426
E PD
Sbjct: 324 SENVQPD 330
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 309/540 (57%), Gaps = 32/540 (5%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIKGKEIHG 65
V+WN +I G R G + E+ M P T SVL DV+ G ++HG
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 66 YAIRHGLDANVCIGSSLINMYAKCA-------------------------------RVED 94
+ G+ ++ + ++L++MYA+CA +V++
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ LF +P +D +SW ++I G V F E L+ FR+M + + + S++ ACA
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L L +G+ + + R G + F+ ++L+DMY+KCG+I A +F M D +WTA+
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAI 327
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I+G A++G +AI +F +M + P+ V F+ VLTAC+HAGL+DK +F SM + Y
Sbjct: 328 ILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYN 387
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
IAP+ HY + DLLGRAGK+ EA + I M P +W TLL+ACRVH N E+ VA
Sbjct: 388 IAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVA 447
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
E++ +DP N Y++LSN YA RW+D LR + KG+KK P CS IE+ + F
Sbjct: 448 ERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEF 507
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
VAGD+SHP I L+ ++ + GY PD EV +V E++KK +LY+HSE+LAI F
Sbjct: 508 VAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAF 567
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ + T IRI+KNLR+C DCH AIK IS++ RE++VRD +RFHHF G CSC DYW
Sbjct: 568 ALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G + EAL + R+M N+ D FT+ SV+ A + G
Sbjct: 215 MPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMG 274
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + Y R G+ + +G++LI+MY+KC +E + +F + +D +W +II G N
Sbjct: 275 EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVN 334
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E ++ F +M+ P V+F ++ AC H + G++ +I N+
Sbjct: 335 GYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVH 394
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
++D+ + G I A D+M + + W ++ +HGN+
Sbjct: 395 YGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 43/307 (14%)
Query: 38 KPDSFTLSSVLPIFADYV----DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE 93
+PD++T ++L A + +H + +R G+ N + SSL+ Y
Sbjct: 16 RPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGA 75
Query: 94 DSHRLF--CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
+ L C PV +WN++I+G + G F E F M A P V++ S++ A
Sbjct: 76 AARALVGECDTPV----AWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSA 131
Query: 152 CAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-------------------- 190
C T + LG Q+HG ++ +G ++ + ++L+DMYA+C
Sbjct: 132 CGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVS 191
Query: 191 -----------GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
G + AR +FD+M D VSWTA+I G +A+ +F +M+ V
Sbjct: 192 WTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNV 251
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ V+V+TAC+ G ++ + GI A+ D+ + G ++ A
Sbjct: 252 SADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERAL 310
Query: 300 EFISNMH 306
+ MH
Sbjct: 311 DVFKGMH 317
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 323/541 (59%), Gaps = 35/541 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W +I G A GL E+ N +M + P SFT S++ +++ GK++H I
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 69 R-HGLDANVCIGSSLINMYAKC-----AR--------------------------VEDSH 96
G +++ +G+S+I++Y KC AR +E +
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
LF LP+KD ++W +++ G QNG E L++F++M ++ V+ + ++ ACA L
Sbjct: 230 GLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 157 TLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ + R+GF N+ + S+L+DMY+KCG+ A +F+ M ++ S++++
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSM 349
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I+G A+HG AH A+ LF M K ++PN V F+ +L+ACSHAGL+++ F M K +G
Sbjct: 350 ILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFG 409
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
+APS +HYA + DLLGRAG L+EA + + M P VW LL ACR+H N ++A A
Sbjct: 410 VAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAA 469
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN-KAYA 393
++F ++PN +G Y++LSN YA+A RW++ + LR +R KG KK P CSW E KN + +
Sbjct: 470 NELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHD 529
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F AGD +HP I +ALK+L+ER+ GY P+ +D+ +++K+ +L HSE+LA+
Sbjct: 530 FFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALA 589
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+G++CT G TI+I+KN+R+C DCH + S+I REIIVRDN RFHHF +G CSCG++
Sbjct: 590 YGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNF 649
Query: 514 W 514
W
Sbjct: 650 W 650
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 37/281 (13%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAISWNSIIAGCV 118
K++H + IR+GL + + LI M K S+ L V + W ++I G
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNM 177
GL E F+ +M + P +FS++ AC + LGKQ+H I+ GF ++
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMD-------------------------------LH 206
++ +S++D+Y KCG + AR +FD+M L
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
D+V+WTA++ G A +G +A+ F++M+ G++ + V V++AC+ G + A ++
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHA-NWI 297
Query: 267 NSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEFISNM 305
+ + G PS +A+ D+ + G EAY+ M
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 13/235 (5%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC----GNIRLARCIFDK 202
SI+ C + + KQ+H IIRNG ++ + L+ M K G+ L +F +
Sbjct: 47 SILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPL--LVFGQ 101
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
++ + WTA+I G AL G ++ + + +M +DGV P S F A+ AC A +D
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
G A ++ DL + G L A + M + W L+ A
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVS-WTELIVAYA 220
Query: 323 VHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMK 377
+ ++E A + + + + D M A+ + YA R K+A M++ GM+
Sbjct: 221 KYGDMESASGLFDDLPLKD---MVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/510 (39%), Positives = 314/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ ++N++I G G + + +IVR M + D + +VL A +V+ G ++H
Sbjct: 178 NVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVH 237
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ L+ NV +GS+L++MY KC +++R+F +LP K+ +SW +I+ QN LF+
Sbjct: 238 TQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFE 297
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ F M + ++P +++ + +CA L TL G L C ++ G + + ++L+
Sbjct: 298 DALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALM 357
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY+K G++ AR +F M D+VSW ++I+G A HG A +A+ F M P+ V
Sbjct: 358 NMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYV 417
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+AC+ GL+D+ + Y N M K+ G+ P EHY + LL R G+L EA FI +
Sbjct: 418 TFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIES 477
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
G W +LLS+C+V++N L +VAE+IF + P ++G YV+LSN YA A RW
Sbjct: 478 NCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGV 537
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R MR G++K P SWI+V ++ + F + DK HP+ +I + L+EL+++++ GYV
Sbjct: 538 VKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYV 597
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ LHDVE+EQK+ L YHSE+LA+ FG+I TP G IRI+KN+R+C DCH AIK I
Sbjct: 598 PNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLI 657
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S R I+VRD RFH EDG CSC DYW
Sbjct: 658 SLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 157/307 (51%), Gaps = 8/307 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS N ++ G A +G + +AL ++R + + + LSS + A G
Sbjct: 76 MPSRNPVSGNLLMSGYASSGRHRDALALLRV---ADFGLNEYVLSSAVAATAHVRSYDMG 132
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HGYAI+ GL + + S++++MY +CA ++++ ++F + + ++NS+I G +
Sbjct: 133 RQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDR 192
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D R M+ + HVS+ +++ CA + LG Q+H ++ + N+++
Sbjct: 193 GQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVG 252
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY KC A +F+ + +IVSWTA++ + DA+ LF ME +GV+
Sbjct: 253 SALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVR 312
Query: 241 PNSVAFVAVLTACSHAGLID--KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN + L +C+ + A T +G+ P A+ ++ ++G +++A
Sbjct: 313 PNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDA 369
Query: 299 YEFISNM 305
+M
Sbjct: 370 RRVFLSM 376
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW ++ +N L+E+AL + M ++P+ FT + L A + G
Sbjct: 275 LPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNG 334
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ ++ G + + ++L+NMY+K VED+ R+F +P +D +SWNSII G +
Sbjct: 335 NALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHH 394
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ F ML A+ P +V+F ++ ACA L + G +++ G
Sbjct: 395 GRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEH 454
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++ + + G + A R I D+V+W +++ ++ N + EQ+ +
Sbjct: 455 YTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQ-- 512
Query: 239 VKPNSVAFVAVLT 251
+KP V +L+
Sbjct: 513 LKPKDVGTYVLLS 525
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H +R +V ++LI +Y KC R+ + ++F +P ++ +S N +++G
Sbjct: 35 GKAVHARVVR-AARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L R +A SS + A AH+ + +G+Q HG I+ G ++ ++
Sbjct: 94 SGRHRDALALLR---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S++L MY +C ++ A +FD + ++ ++ ++I G G + S+ M ++
Sbjct: 151 CSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG 210
Query: 240 KPNSVAFVAVLTACS 254
+ + V++VAVL C+
Sbjct: 211 QWDHVSYVAVLGHCA 225
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 158 LHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L LGK +H ++R FD + ++L+ +Y KCG + LAR +FD M + VS ++
Sbjct: 32 LSLGKAVHARVVRAARFDVVQY--NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 217 GNALHGNAHDAISLF 231
G A G DA++L
Sbjct: 90 GYASSGRHRDALALL 104
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 316/514 (61%), Gaps = 1/514 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ SW +I RN AL R M PD+ +S++ AD ++ G+
Sbjct: 93 PDPNVFSWMMLISACLRNARPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGR 152
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
I + + + +SL+NMY +C ++D R F +P +D +SW +++AG +Q G
Sbjct: 153 SITAPLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCG 212
Query: 122 LFDEGLKFFRQMLIAKIK-PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ R M + ++F++++ AC +L+ + G+ LH II +G ++ +
Sbjct: 213 REASALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLH 272
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL+MYAKCG + AR +FD+ + +++++++ A +G+ DA+ LF ME+DG K
Sbjct: 273 TALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLFWSMEQDGYK 332
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F VL ACSH G +D+AW YF ++ D GI EH+ DLL RAG L +A +
Sbjct: 333 PDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEK 392
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F++ M P W++LL ACR+H+NVE+ + AE +F + P+ G Y +LSN Y+ A +
Sbjct: 393 FLNRMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGK 452
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W AA ++ MR++G+KK SWIE+ K F+ GD HP +I + ++ + + M++
Sbjct: 453 WDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKE 512
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDTK+VLHD EEE+K+++LY+HSE+LAI G+I TP TTI I+KN+RVC DCHTA
Sbjct: 513 HGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTA 572
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK+ +R+I++RD + FHH EDG CSC DYW
Sbjct: 573 AKVISKVTERKIVIRDINLFHHMEDGNCSCRDYW 606
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 2/247 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ ++H + G + + + L+ Y +C VE +H +F P + SW +I+ C+
Sbjct: 49 QAHQLHALMLATGALRSRYLSNKLVQAYGQCGDVESAHAVFARQPDPNVFSWMMLISACL 108
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+N L +R M + P S+I A A L LG+ + + +
Sbjct: 109 RNARPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHDPV 168
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+SLL+MY +CG + F M D VSWT ++ G G A+ L M++DG
Sbjct: 169 VANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMDQDG 228
Query: 239 VKPNS-VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ S + F ++ AC + I + + + G+ + A+ ++ + G++ E
Sbjct: 229 FRITSALTFATLVDACGNLSAIAQG-RHLHDRIITSGVCIDVVLHTALLNMYAKCGRVDE 287
Query: 298 AYEFISN 304
A E
Sbjct: 288 ARELFDQ 294
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA L QLH ++ G + ++++ L+ Y +CG++ A +F + ++ SW
Sbjct: 41 CAAERALPQAHQLHALMLATGALRSRYLSNKLVQAYGQCGDVESAHAVFARQPDPNVFSW 100
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+I + A+ + M+ G P++ A+ A +
Sbjct: 101 MMLISACLRNARPRAALGHYRAMQLRGCHPDAHVVSAIFCAVA 143
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW +I G ++ ++ EAL + +M ++ D+ +S + A + +G
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG 583
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + G A++ I ++LI++YA+C R+++++ F + K+ ISWNS+++G Q+
Sbjct: 584 QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQS 643
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L+ F +ML + + ++ S + A A L + G+Q+H +++ G+D ++
Sbjct: 644 GYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVS 703
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ +YAK G+I A F+ M +++SW A+I G + HG +A+ LFE+M+ G+
Sbjct: 704 NSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIM 763
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V FV VL+ACSH GL+ + YF SM K + + P EHY V DLLGRAG+L A E
Sbjct: 764 PNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAME 823
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+I M +W TLLSAC +HKN+E+ + A + ++P + YV++SN YA +R+
Sbjct: 824 YIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQ 883
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W R M+++G+KK P SWIEVKN +AF AGDK HP ++I E + L R +
Sbjct: 884 WIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSE 943
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYV D+ +L++ E+ QK + + HSE+LAI FG++ + IR++KNLRVC DCH
Sbjct: 944 IGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNW 1003
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK++SKI R IIVRD RFHHF+ G CSC D+W
Sbjct: 1004 IKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 187/350 (53%), Gaps = 5/350 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VS+N++I GL + G + AL + +M LKPD T++S+L A + KG
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +AI+ G+ A++ + SL+++Y+KCA VE +H+ F ++ + WN ++ Q
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQL 441
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + FRQM + + P ++ SI+ C L L+LG+Q+H +I+ GF N+++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAK G + LA I ++ D+VSWTA+I G H +A+ LFE+ME G++
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQ 561
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+++ F + ++AC+ + + ++ + G A+ L R G++QEAY
Sbjct: 562 FDNIGFASAISACAGIRALRQG-QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620
Query: 301 FISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPN-NMGAY 348
+ G N+ W +L+S E A +V ++ + NM Y
Sbjct: 621 AFEKI--GDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 170/341 (49%), Gaps = 14/341 (4%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D+V+W +I GL++NGL EEA+ + M + P + LSSVL G++
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H I+ G + + + L+ +Y++ ++ + R+F + +D +S+NS+I+G VQ G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D L+ F +M +KP ++ +S++ ACA + LH G QLH I+ G ++ + S
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LLD+Y+KC ++ A F + +IV W +++ N D+ +F QM+ +G+ PN
Sbjct: 403 LLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEA 298
+ ++L C+ G + Y + I F+ V D+ + G+L A
Sbjct: 463 QFTYPSILRTCTSLGAL-----YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALA 517
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
+ + P ++V W +++ H A ++ E++
Sbjct: 518 LRILRRL---PEDDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 157/301 (52%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V WN ++V + ++ I RQM + P+ FT S+L + G++IH
Sbjct: 427 NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ I+ G NV + S LI+MYAK ++ + R+ LP D +SW ++IAG VQ+ +F
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F +M I+ ++ F+S + ACA + L G+Q+H GF ++ I ++L+
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+YA+CG I+ A F+K+ + +SW +++ G A G +A+ +F +M + + N
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMF 666
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+ + ++A + I K +SM G E ++ L ++G + +A+ ++
Sbjct: 667 TYGSAISAAASLANI-KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFND 725
Query: 305 M 305
M
Sbjct: 726 M 726
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 162/323 (50%), Gaps = 17/323 (5%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFADYVDVIK 59
+ SWN +I + + R+M + P+ +T + VL I +YV
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV---- 179
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K++H +G D++ + + LI++Y+K +E + ++F + +KD ++W ++I+G Q
Sbjct: 180 -KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQ 238
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NGL +E + F M ++I P SS++ A + LG+QLH +I+ GF ++
Sbjct: 239 NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYV 298
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ +Y++ + A IF M+ D VS+ ++I G G + A+ LF +M++D +
Sbjct: 299 CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL 358
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + ++L+AC+ G + K + K G++ ++ DL + ++ A+
Sbjct: 359 KPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLDLYSKCADVETAH 417
Query: 300 EFISNMHAGPTENV--WLTLLSA 320
+F TEN+ W +L A
Sbjct: 418 KFFLTT---ETENIVLWNVMLVA 437
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 2/246 (0%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + G D + SL++ Y + + ++F + SWN +I V
Sbjct: 80 LHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKS 139
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ FR+ML I P +F+ ++ AC + KQ+H GFD + +A+
Sbjct: 140 NFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN 199
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D+Y+K G I A+ +F+ + + DIV+W A+I G + +G +AI LF M + P
Sbjct: 200 LLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFP 259
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+VL+A + L + + + +G + L R+ KL A
Sbjct: 260 TPYVLSSVLSASTKIQLFELG-EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 302 ISNMHA 307
S M++
Sbjct: 319 FSTMNS 324
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
++ + ++ ++ C +L +LH I ++GFD + SL+D Y + G+ A
Sbjct: 54 VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+FD+ + SW +I + LF +M +G+ PN F VL AC
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGD 173
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ +S T YG S + DL + G ++ A
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/506 (43%), Positives = 304/506 (60%), Gaps = 35/506 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN+ + LA +A+ + ++ ++ PD+FT SSVL + +D+ G+ +HG
Sbjct: 129 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 188
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G SW S+IAG VQ G E +
Sbjct: 189 KVGFR-----------------------------------SWTSMIAGYVQCGKAKEAIH 213
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M A +K V+ +++ ACA L L LG ++H R+GF N+ I+++L+DMY
Sbjct: 214 LFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYV 273
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG + A +F++M+ +VSW+A+I G A+HG A +A+ LF M + G++PN V F+
Sbjct: 274 KCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIG 333
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
+L ACSH GLI + +F SMT+DYGI P EHY + DLL RAG L EA+EFI NM
Sbjct: 334 LLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMK 393
Query: 309 PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLR 368
P VW LL ACRVHKNVE+A + + + +DP N G YV+LSN YA A RW+D A +R
Sbjct: 394 PNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVR 453
Query: 369 VFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTK 428
FM+++ +KKTP S I V + FVAG++SHP +I + +ELLE M +GYVP+T
Sbjct: 454 KFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTS 513
Query: 429 EVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIV 488
VL D+EE +K + HSE+LA+VFG++ TP T IRI+KNLR+C DCH+A K IS IV
Sbjct: 514 VVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIV 573
Query: 489 QREIIVRDNSRFHHFEDGKCSCGDYW 514
REI+VRD +RFH F D CSC DYW
Sbjct: 574 NREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 115/222 (51%), Gaps = 2/222 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SW ++I G + G +EA+++ +M +K + T+ +VL AD + G IH Y+
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 253
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
RHG NV I ++LI+MY KC +E++ ++F + + +SW+++I G +G +E L
Sbjct: 254 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 313
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSLLDM 186
+ F M I+P V+F ++ AC+H+ + G++ + R+ G + ++D+
Sbjct: 314 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 373
Query: 187 YAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
++ G + A M + + V W A++ +H N A
Sbjct: 374 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 415
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VSW+ +I GLA +G EEAL + M V ++P+ T +L + + +G
Sbjct: 288 MEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEG 347
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ R +G+ + ++++ ++ + ++H +P+K + + W +++ C
Sbjct: 348 RRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGAC 406
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 305/514 (59%), Gaps = 37/514 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN++IVG R+G EEA+ + ++M N+K D +T SVL V I G
Sbjct: 376 MEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCI--VGRIDG 433
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H I+ G + + ++L++MYAK + ++ +F + KD ISW S++ G QN
Sbjct: 434 KSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQN 493
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E LK F M I+ + P +SI+ ACA LT L GKQ+H I+ G ++ +
Sbjct: 494 GSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVN 553
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MYAKCG + A IF M + D+++WTA+I+G A +G D++
Sbjct: 554 NSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLK----------- 602
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
YF M K YGI P EHYA + DL GR GKL EA E
Sbjct: 603 ------------------------YFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKE 638
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P VW LL+ACRVH N+EL + A +F ++P N YV+LSN Y AAR+
Sbjct: 639 ILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARK 698
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M++KG+ K P CSWIE+ ++ + F++ D+ HP I + E++ R+++
Sbjct: 699 WDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKE 758
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD LHD++ E K+ L YHSE+LA+ FG++ +P G IRI KNLRVCGDCH+A
Sbjct: 759 VGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSA 818
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K+IS + R II+RD++ FHHF++G+CSC DYW
Sbjct: 819 MKYISGVFTRHIILRDSNCFHHFKEGECSCEDYW 852
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 161/300 (53%), Gaps = 13/300 (4%)
Query: 12 VIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG 71
+I G R G EA ++ ++M KP +TL S+L + + KG+ IHGY +++G
Sbjct: 183 LISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNG 242
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA--ISWNSIIAGCVQNGLFDEGLKF 129
++NV + + L++MYAKC + ++ LF L + W +++ G QNG + ++F
Sbjct: 243 FESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEF 302
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
FR M ++ +F SI+ AC+ ++ G+Q+HGCI+RNGF N ++ S+L+DMYAK
Sbjct: 303 FRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAK 362
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CG++ A+ + + M+ D+VSW ++I+G HG +AI LF++M +K + F +V
Sbjct: 363 CGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSV 422
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA----AVADLLGRAGKLQEAYEFISNM 305
L C G ID I FE+Y A+ D+ + L AY M
Sbjct: 423 LNCCI-VGRID------GKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKM 475
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 35/278 (12%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG-------LFD-------- 124
+ L+N +K +++D+ LF + +D +WN++++G G LF+
Sbjct: 119 NQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSI 178
Query: 125 ----------------EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
E F++M + KP + SI+ C+ L + G+ +HG +
Sbjct: 179 TWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYV 238
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHD 226
++NGF+ N+++ + L+DMYAKC +I A +F + + + V WTA++ G A +G+ H
Sbjct: 239 VKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHK 298
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA 286
AI F M +GV+ N F ++LTACS + ++ G + +A+
Sbjct: 299 AIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRN-GFGCNAYVQSALV 357
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
D+ + G L A + NM + W +++ C H
Sbjct: 358 DMYAKCGDLGSAKRVLENMEDDDVVS-WNSMIVGCVRH 394
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 320/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V +VSWNT+I G +G +AL + +M FTLSS + A + +
Sbjct: 118 MHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINEC 177
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ LD+N +G++++++YAKC ++D+ +F +P + ++W+S+ AG VQN
Sbjct: 178 KQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQN 237
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L FR ++ + S+I+ ACA L G QLH I++ GF N F+A
Sbjct: 238 GLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVA 297
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+D+YA+CG I A +F M+ ++V W A+I + H ++ +A+ LFE+M++ G+
Sbjct: 298 ASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIF 357
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V +++VL+ CSHAGL++K YF+ + D + P+ HY+ + D+LGR+GK EA+E
Sbjct: 358 PNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWE 417
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M PT ++W +LL +CR + N+ LA AE++F ++P+N G +V+LSN YAA+
Sbjct: 418 LLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGN 477
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ R ++++ G KK SWIE K K + FV G++ HP I L+E+ M +
Sbjct: 478 WENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRK 537
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+ LHDV EQK+ LL +HSE+LA+ FG+I P I I KNLR+CGDCH+
Sbjct: 538 FARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSF 597
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K + I +R +IVRD +RFHHF+DG CSCGD+W
Sbjct: 598 MKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 159/315 (50%), Gaps = 4/315 (1%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D +S L + A ++ GK HG AI GL + + LIN+Y KC R + + +F
Sbjct: 56 DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
++ V+ +SWN++IAG +G + LK F +M + SS + ACA ++
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
KQLH ++ D N F+ +++LD+YAKC I+ A +F+KM +V+W+++ G
Sbjct: 176 ECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYV 235
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
+G +A+ LF +++GV+ A+L+AC+ L + +++ G +F
Sbjct: 236 QNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQ-LHAVILKCGFHGNF 294
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI-- 337
A++ D+ R G++++AY + M +W ++++ H + A + EK+
Sbjct: 295 FVAASLVDVYARCGQIEKAYALFAYMEHKNVV-IWNAMIASFSRHAHSWEAMILFEKMQQ 353
Query: 338 FMIDPNNMGAYVILS 352
I PN + +LS
Sbjct: 354 LGIFPNEVTYLSVLS 368
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 135 IAKIKPRHVSFSSI---MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
+A+I + S+I + CA +L +GK HG I G + + L+++Y KCG
Sbjct: 47 LARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCG 106
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +FD M + IVSW +I G G A+ LF +M ++G + + +
Sbjct: 107 RNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTIC 166
Query: 252 ACS 254
AC+
Sbjct: 167 ACA 169
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 283/436 (64%), Gaps = 4/436 (0%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++I+ +++C VE + F + +D ISW+++I G +Q G F E L+ F QM KI+
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
PR S++ ACA+L L G+ +H RN + + +SL+DMYAKCG I LA +
Sbjct: 300 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 359
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F+KM ++ SW A+I G A+HG A DAI LF +M+ + PN + FV VL AC+H GL+
Sbjct: 360 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLV 416
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
K + FNSM K+YG+ P EHY + DLLGRAG L EA + +S++ PT VW LL
Sbjct: 417 QKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLG 476
Query: 320 ACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKT 379
ACR H NVEL +V + + ++P N G Y +LSN YA A RW++ +R M+ +G+K T
Sbjct: 477 ACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTT 536
Query: 380 PACSWIEV-KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ 438
P S I++ + + + F+ GD SHP I + L ++ ER++ EGY PD +VL D++EE+
Sbjct: 537 PGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEE 596
Query: 439 KKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNS 498
K+ ++ HSE+LAI FG+I T GTTIRI+KNLRVC DCH+A K IS++ REIIVRD
Sbjct: 597 KETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRI 656
Query: 499 RFHHFEDGKCSCGDYW 514
R+HHF +G CSC D+W
Sbjct: 657 RYHHFRNGACSCKDFW 672
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SW+ +I G + G + EAL I QM ++P F L SVL A+ + +G
Sbjct: 262 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 321
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH YA R+ + + +G+SL++MYAKC R++ + +F + K+ SWN++I G +
Sbjct: 322 RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMH 381
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ + F +M I P ++F ++ ACAH + G + + + G + +
Sbjct: 382 GRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEH 438
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
++D+ + G + A + + + W A++ HGN
Sbjct: 439 YGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 483
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 17/270 (6%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K+ H +R G + I SL+ YA + E S R+F + + WN +I
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
C++N + + + +M++A +P ++ +++ AC+ + G Q+H ++++G
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170
Query: 176 NMFIASSLLDMYAKCGNIRLARCIF-DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ I SS + MYA G + AR I DK D V W A+I G G A LFE M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+ A ++ + C G+++ A +F+ M + I+ ++A+ D + G
Sbjct: 231 PDRSMISTWNAMISGFSRC---GMVEVAREFFDEMKERDEIS-----WSAMIDGYIQEGC 282
Query: 295 LQEAYEFISNMHAG---PTENVWLTLLSAC 321
EA E M P + V ++LSAC
Sbjct: 283 FMEALEIFHQMQKEKIRPRKFVLPSVLSAC 312
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL-----ARCIFDKMDLHDIVS 210
T+LH KQ H I+R G + +IA SL+ YA R + +FD + ++
Sbjct: 45 TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFL 104
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +I + AI L+ +M +PN + AVL ACS AG++ + +
Sbjct: 105 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
K +G+ ++ + G+L EA + + W ++ VE A
Sbjct: 165 K-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 223
Query: 331 GKVAE 335
++ E
Sbjct: 224 RELFE 228
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/510 (40%), Positives = 311/510 (60%), Gaps = 14/510 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNI-VRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P +L +WNT+I A + ++L I +R + PD FT ++ ++ ++
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK HG I+ L ++V I +SLI+ YAKC + +R+F P +D +SWNS+I VQ
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQ 214
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E L+ F++M +KP ++ ++ ACA + G+ +H I RN +++ +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTL 274
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA------------LHGNAHDA 227
++++LDMY KCG++ A+ +FDKM DIVSWT +++G A +HG+ DA
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDA 334
Query: 228 ISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
I+LF +M++D VKPN+V F +L ACSH GL+++ ++FN M YG+ P +HYA + D
Sbjct: 335 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 394
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGA 347
+LGRAG L+EA E I M P +VW LL AC +H+NV LA + ++ ++P N GA
Sbjct: 395 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGA 454
Query: 348 YVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRI 407
YV+LSN YA A +W + LR MR+ G+KK P CS IEV + F+ GD SHP +I
Sbjct: 455 YVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKI 514
Query: 408 NEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHSERLAIVFGIICTPDGTTIR 466
L E++ R+E GYVP+ +L VEEE K+ L+ HSE+LAI FG+I T IR
Sbjct: 515 YAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIR 574
Query: 467 IIKNLRVCGDCHTAIKFISKIVQREIIVRD 496
I+KNLRVCGDCH+ K +SK+ REI++RD
Sbjct: 575 IVKNLRVCGDCHSVAKLVSKLYDREILLRD 604
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 322/541 (59%), Gaps = 35/541 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W +I G A GL E+ N +M + P SFT S++ +++ GK++H I
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 69 R-HGLDANVCIGSSLINMYAKC-----AR--------------------------VEDSH 96
G +++ +G+S+I++Y KC AR +E +
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
LF LP KD ++W +++ G QNG E L++F++M ++ V+ + ++ ACA L
Sbjct: 230 GLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 157 TLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ + R+GF N+ + S+L+DMY+KCG+ A +F+ M ++ S++++
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSM 349
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I+G A+HG AH A+ LF M K ++PN V F+ +L+ACSHAGL+++ F M K +G
Sbjct: 350 ILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFG 409
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
+APS +HYA + DLLGRAG L+EA + + M P VW LL ACR+H N ++A A
Sbjct: 410 VAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAA 469
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN-KAYA 393
++F ++PN +G Y++LSN YA+A RW++ + LR +R KG KK P CSW E KN + +
Sbjct: 470 NELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHD 529
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F AGD +HP I +ALK+L+ER+ GY P+ +D+ +++K+ +L HSE+LA+
Sbjct: 530 FFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALA 589
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+G++CT G TI+I+KN+R+C DCH + S+I REIIVRDN RFHHF +G CSCG++
Sbjct: 590 YGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNF 649
Query: 514 W 514
W
Sbjct: 650 W 650
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 37/281 (13%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAISWNSIIAGCV 118
K++H + IR+GL + + LI M K S+ L V + W ++I G
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNM 177
GL E F+ +M + P +FS++ AC + LGKQ+H I+ GF ++
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS--------------------------- 210
++ +S++D+Y KCG + AR +FD+M D+VS
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238
Query: 211 ----WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
WTA++ G A +G +A+ F++M+ G++ + V V++AC+ G + A ++
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHA-NWI 297
Query: 267 NSMTKDYGIAPSFEHY--AAVADLLGRAGKLQEAYEFISNM 305
+ + G PS +A+ D+ + G EAY+ M
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 13/235 (5%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC----GNIRLARCIFDK 202
SI+ C + + KQ+H IIRNG ++ + L+ M K G+ L +F +
Sbjct: 47 SILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPL--LVFGQ 101
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
++ + WTA+I G AL G ++ + + +M +DGV P S F A+ AC A +D
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
G A ++ DL + G L A + M + W L+ A
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVS-WTELIVAYA 220
Query: 323 VHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMK 377
+ ++E A + + + +M A+ + YA R K+A M++ GM+
Sbjct: 221 KYGDMESASGLFDD---LPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/509 (40%), Positives = 321/509 (63%), Gaps = 5/509 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W + +G +RNG +EAL + +M + +F S L +D D+ G+ +H +
Sbjct: 146 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVL 205
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ-NGLFDEGL 127
+ D + + ++L+ +Y++ +++ R+F +P ++ +SWNS+IAG V+ +G+F E +
Sbjct: 206 KATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVF-EAI 264
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ FR M + V+ ++I+P CA +T L GK++H I+++ + + +SL+DMY
Sbjct: 265 EAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMY 324
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AKCG + R +F+ M D+ SW +I G A++G +A+ F++M G P+ + F+
Sbjct: 325 AKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFI 384
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
A+L+ CSHAGL D F M DYGI+P+ EHYA + D+LGRAG+++EA E + NM
Sbjct: 385 ALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPF 444
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
PT ++W +LL++CR+H NV LA VA+++F ++PNN G YV+LSN YA A W+ +
Sbjct: 445 KPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVV 504
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRI--NEALKELLERMEQEGYVP 425
R FM +GM K CSW+++K+K + FVAG S+ F + + + K L+E ME+ GYVP
Sbjct: 505 REFMEKRGMTKEAGCSWLQIKSKIHTFVAGG-SNEFRNSVEYKKVWKRLMEAMEEVGYVP 563
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
DT VLHDV EE + + HSERLA +F +I T G IRI KNLRVC DCH+ +K +S
Sbjct: 564 DTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLS 623
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+ R I++RD +RFHHF+DG CSC DYW
Sbjct: 624 KVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSWN++I GL + EA+ R M + TL+++LP+ A + G
Sbjct: 239 MPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSG 298
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH ++ + + +SL++MYAKC ++ R+F + KD SWN++I G N
Sbjct: 299 KEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 358
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G E ++ F++M+ + P ++F +++ C+H G +L + + G +
Sbjct: 359 GRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEH 418
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+D+ + G I+ A I M S W +++ LHGN A ++ +++ +
Sbjct: 419 YACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE-- 476
Query: 239 VKPNSVAFVAVLT 251
++PN+ +L+
Sbjct: 477 LEPNNAGNYVMLS 489
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 11/257 (4%)
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLF------CLLPVKDAISWNSIIAGCVQNGLF 123
H L N + LI +++ C RV+++ R+F LP W ++ G +NG
Sbjct: 103 HNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNGYP 159
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L + +M+ + + +FS + AC+ L L G+ +H +++ D + + ++L
Sbjct: 160 KEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNAL 219
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L +Y++ G A +FD M ++VSW ++I G +AI F M+ G+ +
Sbjct: 220 LRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSW 279
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V +L C+ + + K P ++ D+ + G + +
Sbjct: 280 VTLTTILPVCARVTALGSGKEIHAVIVKSTA-KPDAPVLNSLVDMYAKCGAMDYCRRVFN 338
Query: 304 NMHAGPTENVWLTLLSA 320
M G W TL++
Sbjct: 339 GMQ-GKDLTSWNTLITG 354
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 315/515 (61%), Gaps = 3/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I GL +N EALN+ + M +K S T + V+ A+ G
Sbjct: 185 MPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 244
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ I+ G + +SLI +YA C R EDS ++F + + W ++++G N
Sbjct: 245 TQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLN 304
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L F +M+ I P +F+S + +C+ L TL GK++HG ++ G F+
Sbjct: 305 RKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVG 364
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+ GN+ A +F ++ IVSW ++I+G A HG A +F QM + +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG-IAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + F +L+ACSH G + K F ++ I +HY + D+LGR G+L+EA
Sbjct: 425 PDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAE 484
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P E VWL LLSACR+H +V+ K A IF +D + AYV+LSN YA+A
Sbjct: 485 KLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + LRV M+ KG+ K P SW+ ++ K + F +GD+ H RI E L+ L E+++
Sbjct: 545 RWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCL--RIFEKLEFLREKLK 602
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPD + LHDVE+EQK+ +L+YHSERLAI FG+I T +G+T+ ++KNLRVC DCHT
Sbjct: 603 ELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHT 662
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS++V +I++RD +RFHHF++G CSCGDYW
Sbjct: 663 VIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 139/272 (51%), Gaps = 32/272 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D+VSWN++I G G + A+ + +M P+ +S + ++ G
Sbjct: 92 MPLRDVVSWNSMISGCVECGDIDTAVKMFDEM------PERSVVS--------WTAMVNG 137
Query: 61 KEIHGYAIRHGLD------------ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI 108
R G+ ++ +++++ Y + +V+D+ +LF +P K+ I
Sbjct: 138 ------CFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVI 191
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
SW ++I G QN E L F+ ML IK +F+ ++ ACA+ H+G Q+HG I
Sbjct: 192 SWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFI 251
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
I++GF ++ +SL+ +YA C +R +F +M + WTA++ G +L+ DA+
Sbjct: 252 IKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDAL 311
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
++F +M ++ + PN F + L +CS G +D
Sbjct: 312 NVFSEMIRNSILPNQSTFASGLNSCSALGTLD 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 101/182 (55%), Gaps = 8/182 (4%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+V + + +I+ Y + R+ D+ LF +P++D +SWNS+I+GCV+ G D +K F +M
Sbjct: 65 HVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMP 124
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ VS+++++ C + ++L C + ++ ++++ Y + G +
Sbjct: 125 ERSV----VSWTAMVNGCFRFGMVDQAERLF-CQMPV---KDIAAWNAMVHGYLQFGKVD 176
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F +M +++SWT +I G + + +A++LF+ M + +K S F V+TAC+
Sbjct: 177 DALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACA 236
Query: 255 HA 256
+A
Sbjct: 237 NA 238
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/518 (40%), Positives = 314/518 (60%), Gaps = 7/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWN +I G ++A ++ +M + PD +T SS+L A + G
Sbjct: 231 MDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDG 290
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H G D + + ++LI+M+ +C +E + R F + K+ +WN+++A Q
Sbjct: 291 RMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQ- 349
Query: 121 GLFDEG---LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
FD+G L ++ ML+ P +FSS++ +CA L L GK +H C GF+ ++
Sbjct: 350 --FDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDV 407
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L++MYAKCG++ A+ FD + D+VSW+A+I +A HG+A +A+ L M
Sbjct: 408 ILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQ 467
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ N V +VL ACSH G + + YF +++D+GI E+ DLLGRAG L+E
Sbjct: 468 GIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKE 527
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A + M + +TLL C+VH +V + ++I ++P N G+YV+L+N YAA
Sbjct: 528 AEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAA 587
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW D A LR +MR KG+K+ CS IE ++K Y F GD S+P I L+ L R
Sbjct: 588 AGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSR 647
Query: 418 M-EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
M E+EGYVPDT++V HDV +++K+ LL +HSE++A+ FG+I +P G+T+RIIKNLRVC D
Sbjct: 648 MKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSD 707
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHT K SKI R IIVRD +RFHHFE G CSCGDYW
Sbjct: 708 CHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 168/314 (53%), Gaps = 3/314 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SW+ ++ +N +Y+EAL + ++M + D++TLSSVL +DV +G+ + A
Sbjct: 35 SWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKA 94
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQNGLFDEG 126
G + +V + +SLI+++AKC +E++ +F + ++D IS ++I V++G D
Sbjct: 95 EELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLA 154
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L + +M ++P ++++I+ AC+ L GK +H I+ + N+ + ++L+ M
Sbjct: 155 LDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITM 214
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG+++ ++ +F MD+ D+VSW A+I L+G+ DA SLF +M G P+ F
Sbjct: 215 YAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTF 274
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
++L AC+ ++ +T G F + + R G L+ A + ++
Sbjct: 275 SSILGACASPKRLEDGRMLHVRITA-RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIE 333
Query: 307 AGPTENVWLTLLSA 320
W T+L+A
Sbjct: 334 KKEL-GAWNTMLAA 346
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 164/331 (49%), Gaps = 8/331 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D++S +I R+G + AL+ +M + L+PD+FT +++L + ++ GK
Sbjct: 132 MRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKH 191
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH + + N+ + ++LI MYAKC ++DS LF + VKD +SWN++IA G
Sbjct: 192 IHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGH 251
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ F +M P +FSSI+ ACA L G+ LH I GFD + + ++
Sbjct: 252 DKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNN 311
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ M+ +CG++ AR F ++ ++ +W ++ A DA+ L++ M +G P+
Sbjct: 312 LISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPD 371
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA---Y 299
F +V+ +C+ G + + + + + G A+ ++ + G L +A +
Sbjct: 372 RFTFSSVVDSCASLGAL-REGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSF 430
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ ISN W +++A H + E A
Sbjct: 431 DGISNKDVVS----WSAMIAASAQHGHAEEA 457
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + +I MY KC ED+ ++F + ++A SW+ ++ VQN ++ E L+ +++M+ +
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE 63
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
I + SS++ AC L + G+ + GF+ ++ +A+SL+ ++AKCG + A
Sbjct: 64 ISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAE 123
Query: 198 CIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+F M + DI+S TA+I HG A+ + +M G++P++ + A+L ACS
Sbjct: 124 SVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACS 181
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ F+A+ ++ MY KC + AR +FD++ + SW+ ++ + +A+ ++++M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 236 KDGVKPNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
+ + ++ +VL AC+ G + + + KD +A S H L
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIH------LFA 114
Query: 291 RAGKLQEAYEFISNMHA 307
+ G L+EA +M A
Sbjct: 115 KCGCLEEAESVFRSMGA 131
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/484 (40%), Positives = 304/484 (62%), Gaps = 1/484 (0%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR 91
M + P+ + VL A D+ GK +HG ++ G D ++ + +++++MY C+
Sbjct: 100 MLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSG 159
Query: 92 -VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
+E + +LF +P D ++W ++I G + G + FR+M IA + P V+ S++
Sbjct: 160 GMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLS 219
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
AC L L LGK + I + + ++++L+DM+AKCG++ A +F M IVS
Sbjct: 220 ACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVS 279
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
WT+VI+G A+HG +A+SLFE+M+ G+ P +AF+ +L+ACSH+GL+++ YF+ MT
Sbjct: 280 WTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMT 339
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ +GI P EHY + DLL RAG + EA EF+ M P +W TL+SACRVH ++L
Sbjct: 340 RQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLG 399
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
+++++ +P + YV+LSN Y W+ + +RV M KG++K P + IE+ N+
Sbjct: 400 ESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNE 459
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
+ F+ GD+SH Y+ I + + E+ M++ GY P T EV D++EE K++ L HSE+L
Sbjct: 460 IHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKL 519
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI F ++ TP G+ IRI KNLRVCGDCH+A KFISKI REI++RD SRFHHF DG+CSC
Sbjct: 520 AIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHFRDGQCSC 579
Query: 511 GDYW 514
GD+W
Sbjct: 580 GDFW 583
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W +I G AR G A+ + R+M + PD T+ SVL D + G
Sbjct: 171 MPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELG 230
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I Y + + V + ++L++M+AKC V+ + LF + + +SW S+I G +
Sbjct: 231 KWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMH 290
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F +M + + P ++F ++ AC+H + G+Q + R G +
Sbjct: 291 GRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEH 350
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++D+ ++ G + A ++M + + + W +I +HG S+ +Q+ ++
Sbjct: 351 YGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRN 409
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 283/436 (64%), Gaps = 4/436 (0%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++I+ +++C VE + F + +D ISW+++I G +Q G F E L+ F QM KI+
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
PR S++ ACA+L L G+ +H RN + + +SL+DMYAKCG I LA +
Sbjct: 301 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 360
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F+KM ++ SW A+I G A+HG A DAI LF +M+ + PN + FV VL AC+H GL+
Sbjct: 361 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLV 417
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
K + FNSM K+YG+ P EHY + DLLGRAG L EA + +S++ PT VW LL
Sbjct: 418 QKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLG 477
Query: 320 ACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKT 379
ACR H NVEL +V + + ++P N G Y +LSN YA A RW++ +R M+ +G+K T
Sbjct: 478 ACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTT 537
Query: 380 PACSWIEV-KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ 438
P S I++ + + + F+ GD SHP I + L ++ ER++ EGY PD +VL D++EE+
Sbjct: 538 PGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEE 597
Query: 439 KKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNS 498
K+ ++ HSE+LAI FG+I T GTTIRI+KNLRVC DCH+A K IS++ REIIVRD
Sbjct: 598 KETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRI 657
Query: 499 RFHHFEDGKCSCGDYW 514
R+HHF +G CSC D+W
Sbjct: 658 RYHHFRNGACSCKDFW 673
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SW+ +I G + G + EAL I QM ++P F L SVL A+ + +G
Sbjct: 263 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 322
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH YA R+ + + +G+SL++MYAKC R++ + +F + K+ SWN++I G +
Sbjct: 323 RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMH 382
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ + F +M I P ++F ++ ACAH + G + + + G + +
Sbjct: 383 GRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEH 439
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
++D+ + G + A + + + W A++ HGN
Sbjct: 440 YGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 484
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 17/270 (6%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K+ H +R G + I SL+ YA + E S R+F + + WN +I
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
C++N + + + +M++A +P ++ +++ AC+ + G Q+H ++++G
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171
Query: 176 NMFIASSLLDMYAKCGNIRLARCIF-DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ I SS + MYA G + AR I DK D V W A+I G G A LFE M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+ A ++ + C G+++ A +F+ M + I+ ++A+ D + G
Sbjct: 232 PDRSMISTWNAMISGFSRC---GMVEVAREFFDEMKERDEIS-----WSAMIDGYIQEGC 283
Query: 295 LQEAYEFISNMHAG---PTENVWLTLLSAC 321
EA E M P + V ++LSAC
Sbjct: 284 FMEALEIFHQMQKEKIRPRKFVLPSVLSAC 313
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL-----ARCIFDKMDLHDIVS 210
T+LH KQ H I+R G + +IA SL+ YA R + +FD + ++
Sbjct: 46 TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFL 105
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W +I + AI L+ +M +PN + AVL ACS +G++ + +
Sbjct: 106 WNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV 165
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
K +G+ ++ + G+L EA + + W ++ VE A
Sbjct: 166 K-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 224
Query: 331 GKVAE 335
++ E
Sbjct: 225 RELFE 229
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 306/514 (59%), Gaps = 36/514 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN+++ G A+N +++AL + R+M +V + D+ T++S+LP
Sbjct: 202 MSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP----------- 250
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
A+ + NV MY K +F + K +SWN +I ++N
Sbjct: 251 ------AVSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E ++ + M +P VS +S++PAC + L LGK++HG I R N+ +
Sbjct: 289 AMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +F+ M D+VSWTA+I G DA++LF +M+ G+
Sbjct: 349 NALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLV 408
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV L ACSHAGL+++ S F MT Y I P EH A + DLLGRAGK++EAY+
Sbjct: 409 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYK 468
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P E VW LL ACRVH N ++ A+K+F + P G YV+LSN YA A R
Sbjct: 469 FIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 528
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ ++R M++KG+KK P S +EV + F+ GD+SHP I L L+++M++
Sbjct: 529 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKE 588
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD---GTTIRIIKNLRVCGDC 477
GYVPD++ LHDVEEE K+ L HSE+LAIVF ++ T + IRI KNLR+CGDC
Sbjct: 589 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDC 648
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
H A K IS+I REII+RD +RFH F G CSC
Sbjct: 649 HVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 38 KPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR 97
K +F L VL + D + + +H I L N +G L+ YA V + +
Sbjct: 40 KETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARK 96
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +P ++ I N +I V NG + EG++ F M +KP H +F ++ AC+
Sbjct: 97 VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGN 156
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
+ +GK++HG + G +F+ + L+ MY KCG + AR + D+M D+VSW +++ G
Sbjct: 157 IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAG 216
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
A + DA+ + +ME + ++ ++L A S+
Sbjct: 217 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 255
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 134 LIAKIKPRHVSF--SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
L K P+ +F ++ L TL + +H II N + L+ YA
Sbjct: 33 LDQKNSPKETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLK 89
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
++ AR +FD++ +++ +I +G + I +F M VKP+ F VL
Sbjct: 90 DVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLK 149
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
ACS +G I S TK G++ + + + G+ G L EA + M
Sbjct: 150 ACSCSGNIVIGKKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 202
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/507 (40%), Positives = 299/507 (58%), Gaps = 31/507 (6%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS--- 95
PD T +L ++ + G+ IH + + G + V + + L+ MYA C +E +
Sbjct: 134 PDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLV 193
Query: 96 ----------------------------HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
R+F +P +D +SW+ +I G VQ F EGL
Sbjct: 194 FDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGL 253
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F+ M+ KI+P + + ACAHL + G+ + + R + + ++L+DMY
Sbjct: 254 GLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMY 313
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
+KCG++ A +F KM ++++W+A+I G A++G DA++LF QME GVKPN V F+
Sbjct: 314 SKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFI 373
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+L ACSH+ L+D+ S+F+SMT YG+ P+ H+ + DL GRAG L +A I +M
Sbjct: 374 GILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPF 433
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P +W LL+ACR+H + EL +V +++ +DPN+ G YV+LSN YAA RW A L
Sbjct: 434 KPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAEL 493
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R MR + + KTP CS+I++ + + FVAGD SHP I L E+ + ++ GY PDT
Sbjct: 494 RRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDT 553
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
+VL D++EE+K+ L +HSE+LAI FG+I T GTTIRI KNLRVC DCH+A K ISKI
Sbjct: 554 GQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKI 613
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
REIIVRD RFHHF DG CSC D+W
Sbjct: 614 YNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 115/238 (48%), Gaps = 6/238 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW+ +I G + ++E L + + M ++P+ L + L A + +G
Sbjct: 228 MPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQG 287
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y R + V +G++LI+MY+KC VE + +F + K+ ++W+++I G N
Sbjct: 288 QWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAIN 347
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ-LHGCIIRNGFDDNMFI 179
G + L F QM + +KP V+F I+ AC+H + G H G N
Sbjct: 348 GQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHH 407
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+Y + G + A+ + M + W A++ +HG+ L EQ+ K
Sbjct: 408 HCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTE----LGEQVGK 461
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 35/278 (12%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKC--ARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+IH I G+ ++ + S +++ A + + LF + D N++I
Sbjct: 53 QIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAF 112
Query: 120 NGLFDEGLKFFRQMLIAKIK-PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ + + F+ +M + + P +F ++ AC+ + +L LG+ +H + + G+ +
Sbjct: 113 SPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVS 172
Query: 179 IASSLLDMYA-------------------------------KCGNIRLARCIFDKMDLHD 207
+++ L+ MYA KCG + AR +F+ M D
Sbjct: 173 VSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRD 232
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSW+ +I G + + LF+ M + ++PN V L+AC+H G +++ +
Sbjct: 233 VVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQG-QWIE 291
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + + A+ D+ + G ++ A E M
Sbjct: 292 RYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKM 329
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/519 (40%), Positives = 325/519 (62%), Gaps = 10/519 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D +++ + L+ G A ++R + V D +++L ++ D+ +
Sbjct: 258 MPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAV----DVIAWNALLEGYSRTGDLDEV 313
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A+ H A + +L+N+Y KC RV+D+ R+ +PV+ ++SW ++IA QN
Sbjct: 314 RRLFS-AMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQN 372
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
G E + F+ M + +P ++ S++ +CA L TL LGK++H I + F ++ +
Sbjct: 373 GNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLML 432
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++++ MY KCGN+ LAR +F+ + L +V+WTA+I A +G +AI LF++M D
Sbjct: 433 LNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVID 492
Query: 238 G-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G +PN V F++VL+ACSH G +++AW +F SM D+G+ P+ +HY + DLLGRAG+L
Sbjct: 493 GGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLG 552
Query: 297 EAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EA + + + V W+ LSAC+++ ++E + + A+++ ++P N+ V+LSN Y
Sbjct: 553 EAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVY 612
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
AA R D A +R M++ G+KK SWIE+ N+ + F+ D SHP I L+ L
Sbjct: 613 AAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLH 672
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+++ GYVPDTK VL DV+EE+K LL YHSERLA+ GII TP GTT+R++KNLRVC
Sbjct: 673 REIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCS 732
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFIS+IV R+IIVRD SRFHHF+DG CSCGDYW
Sbjct: 733 DCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 153/337 (45%), Gaps = 51/337 (15%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKP--DSFTLSSVLPIFADYVDVIKGKE 62
D+VSW ++ G AR+ EEA + R+M P D+ T +SVL +A + + +E
Sbjct: 135 DVVSWAILVAGYARHDRLEEASALFRRM------PLWDTVTCTSVLQGYAHNGHLAEAQE 188
Query: 63 ----IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
I G R DA C +++I Y K ARV+ + LF + +++A SW+ ++
Sbjct: 189 LFDRIGGAGDR---DATAC--NAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYA 243
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ--------------- 163
QNG D K F +M + ++F+++ + L ++
Sbjct: 244 QNGHLDLAKKSFDRM----PQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNA 299
Query: 164 -LHGCIIRNGFDD--------------NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
L G D+ +A +L+++Y KCG + AR + D M +
Sbjct: 300 LLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTS 359
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSWTA+I A +GNA +AI+LF+ M+ +G +P+ + ++V+ +C+ G +
Sbjct: 360 VSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHAR 419
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + S AV + G+ G L+ A E ++
Sbjct: 420 IRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESV 456
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F + ACA LH K LH I R+ DN + + L+D++ KCG+ AR +F+++
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV--AVLTACSHAGLIDKA 262
L + SW+ +I HDA +LF+ M P AF ++ A + +D A
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSM------PGFDAFTWNIMIAAYARINRLDDA 123
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+ M + +A + R +L+EA M
Sbjct: 124 RELFHGMISGRDVVS----WAILVAGYARHDRLEEASALFRRM 162
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 60 GKEIHGYAIRHGLDA------NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
G+++H I H A N + + LI+++ KC + + +F + + + SW+ I
Sbjct: 20 GRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCI 79
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS--SIMPACAHLTTLHLGKQL-HGCIIR 170
I V + + F M P +F+ ++ A A + L ++L HG I
Sbjct: 80 IQAYVSSSRIHDARALFDSM------PGFDAFTWNIMIAAYARINRLDDARELFHGMI-- 131
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
+G D + + L+ YA+ + A +F +M L D V+ T+V+ G A +G+ +A L
Sbjct: 132 SGRD--VVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQEL 189
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
F+++ G + ++ A A++ A +D A F
Sbjct: 190 FDRIGGAGDR-DATACNAMIAAYGKNARVDLAEGLF 224
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 325/510 (63%), Gaps = 4/510 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ +I G +G Y +A+ + +M + ++ PD++ ++S+L + + +G+E+H A+
Sbjct: 98 YTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRAL 157
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP----VKDAISWNSIIAGCVQNGLFD 124
+ GL +N + ++ +Y KC + D+ R+F +P KD + W ++I G V+N +
Sbjct: 158 KLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMN 217
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ FR M ++P + ++ AC+ L L +G+ +H + + + N+F+ ++L+
Sbjct: 218 RALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALI 277
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY++CG+I A+ +FD+M D++++ +I G +++G + AI LF M ++P +V
Sbjct: 278 NMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNV 337
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL ACSH GL+D + F+SMT+DYG+ P EHY + DLLGR G+L+EAY+ I
Sbjct: 338 TFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRT 397
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P + TLLSAC++HKN+EL +VA+ + + G YV+LS+ YA++ +WK+A
Sbjct: 398 MKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEA 457
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M+ GM+K P CS IEV N+ + F+ GD HP RI E L+EL + EGY
Sbjct: 458 AQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYH 517
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ + VL D+E+ +K+ L HSERLAI +G+I T T IR++KNLRVC DCH+AIK I
Sbjct: 518 PEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLI 577
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KI +R+++VRD +RFH+FE+G CSCGDYW
Sbjct: 578 AKITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W +I G RN AL R M N++P+ FT+ VL + + G+ +H
Sbjct: 199 DTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 258
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + ++ N+ +G++LINMY++C ++++ +F + +D I++N++I+G NG
Sbjct: 259 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 318
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSL 183
+ ++ FR M+ +++P +V+F ++ AC+H + G ++ + R+ G + + +
Sbjct: 319 QAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCM 378
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEK 236
+D+ + G + A + M + + +++G L H + L EQ+ K
Sbjct: 379 VDLLGRVGRLEEAYDLIRTMKM----TPDHIMLGTLLSACKMHKNLELGEQVAK 428
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH IR+G + + L+ +KC ++ + R+F + + ++I G V +G
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + ++ + +ML I P + +SI+ AC L G+++H ++ G N +
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 170
Query: 183 LLDMYAKCGNIRLARCIFDKMD----LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++++Y KCG + AR +F++M D V WTA+I G + + A+ F M+ +
Sbjct: 171 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGEN 230
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+PN V VL+ACS G ++ + +S + + I + A+ ++ R G + EA
Sbjct: 231 VRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 289
Query: 299 YEFISNM 305
M
Sbjct: 290 QTVFDEM 296
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 324/540 (60%), Gaps = 37/540 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ ++I G G Y +A+N+ QM ++ D++ ++++L + GKE+HG +
Sbjct: 93 YTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVL 152
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP------------------------- 103
+ GL + I L+ +Y KC +ED+ ++F +P
Sbjct: 153 KSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIE 212
Query: 104 ------VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+D + W +I G V+NG F+ GL+ FR+M + ++P V+F ++ ACA L
Sbjct: 213 VFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGA 272
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L LG+ +H + + G + N F+A +L++MY++CG+I A+ +FD + + D+ ++ ++I G
Sbjct: 273 LELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGG 332
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
ALHG + +A+ LF +M K+ V+PN + FV VL ACSH GL+D F SM +GI P
Sbjct: 333 LALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEP 392
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY + D+LGR G+L+EA++FI M + + +LLSAC++HKN+ + KVA+ +
Sbjct: 393 EVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLL 452
Query: 338 ---FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
+ ID G++++LSN YA+ RW AA +R M G+ K P CS IEV N + F
Sbjct: 453 SEHYRIDS---GSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEF 509
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
+GD HP RI + L+EL + EGY+P T+ LHD+++EQK+ L HSERLAI +
Sbjct: 510 FSGDLRHPERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICY 569
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
G++ T TT+R+ KNLR+C DCH IK I+KI +R+I+VRD +RFHHFE+G+CSC DYW
Sbjct: 570 GLVSTEAYTTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V W VI GL RNG + L + R+M ++P+ T VL A + G
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELG 276
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH Y + G++ N + +LINMY++C ++++ LF + VKD ++NS+I G +
Sbjct: 277 RWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALH 336
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
G E ++ F +ML +++P ++F ++ AC+H + LG ++
Sbjct: 337 GKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEI 380
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 76/350 (21%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH +AI+ + + L+ +Y K ++ + +LF + + S+I G V
Sbjct: 44 QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + + F QM+ + + + ++++ AC L GK++HG ++++G + IA
Sbjct: 104 GSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA 163
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS------------------------------ 210
L+++Y KCG + AR +FD M D+V+
Sbjct: 164 LKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTV 223
Query: 211 -WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC---------------- 253
WT VI G +G + + +F +M+ GV+PN V FV VL+AC
Sbjct: 224 CWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYM 283
Query: 254 -------------------SHAGLIDKAWSYFNSM-TKDYGIAPSFEHYAAVADLLGRAG 293
S G ID+A + F+ + KD Y ++ L G
Sbjct: 284 RKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVST------YNSMIGGLALHG 337
Query: 294 KLQEAYEFISNM---HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI 340
K EA E S M P ++ +L+AC V+L G++ E + MI
Sbjct: 338 KSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMI 387
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 318/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW +I G ++ ++ EAL + +M ++ D+ +S + A + +G
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG 583
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + G A++ I ++LI++YA+C R+++++ F + K+ ISWNS+++G Q+
Sbjct: 584 QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQS 643
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L+ F +ML + + ++ S + A A L + G+Q+H +++ G+D ++
Sbjct: 644 GYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVS 703
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ +YAK G+I A F+ M +++SW A+I G + HG +A+ LFE+M+ G+
Sbjct: 704 NSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIM 763
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V FV VL+ACSH GL+ + YF SM K + + P EHY V DLLGRAG+L A E
Sbjct: 764 PNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAME 823
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+I M +W TLLSAC +HKN+E+ + A + ++P + YV++SN YA +R+
Sbjct: 824 YIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQ 883
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W R M++ G+KK P SWIEVKN +AF AGDK HP ++I E + L R +
Sbjct: 884 WIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSE 943
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYV D+ +L++ E+ QK + + HSE+LAI FG++ + IR++KNLRVC DCH
Sbjct: 944 IGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNW 1003
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK++SKI R IIVRD RFHHF+ G CSC D+W
Sbjct: 1004 IKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 187/350 (53%), Gaps = 5/350 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VS+N++I GL + G + AL + +M LKPD T++S+L A + KG
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +AI+ G+ A++ + SL+++Y+KCA VE +H+ F ++ + WN ++ Q
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQL 441
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ + FRQM + + P ++ SI+ C L L+LG+Q+H +I+ GF N+++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAK G + LA I ++ D+VSWTA+I G H +A+ LFE+ME G++
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQ 561
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+++ F + ++AC+ + + ++ + G A+ L R G++QEAY
Sbjct: 562 FDNIGFASAISACAGIRALRQG-QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620
Query: 301 FISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPN-NMGAY 348
+ G N+ W +L+S E A +V ++ + NM Y
Sbjct: 621 AFEKI--GDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 170/341 (49%), Gaps = 14/341 (4%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D+V+W +I GL++NGL EEA+ + M + P + LSSVL G++
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H I+ G + + + L+ +Y++ ++ + R+F + +D +S+NS+I+G VQ G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D L+ F +M +KP ++ +S++ ACA + LH G QLH I+ G ++ + S
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
LLD+Y+KC ++ A F + +IV W +++ N D+ +F QM+ +G+ PN
Sbjct: 403 LLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEA 298
+ ++L C+ G + Y + I F+ V D+ + G+L A
Sbjct: 463 QFTYPSILRTCTSLGAL-----YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALA 517
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
+ + P ++V W +++ H A ++ E++
Sbjct: 518 LRILRRL---PEDDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 157/301 (52%), Gaps = 1/301 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V WN ++V + ++ I RQM + P+ FT S+L + G++IH
Sbjct: 427 NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ I+ G NV + S LI+MYAK ++ + R+ LP D +SW ++IAG VQ+ +F
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F +M I+ ++ F+S + ACA + L G+Q+H GF ++ I ++L+
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+YA+CG I+ A F+K+ + +SW +++ G A G +A+ +F +M + + N
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMF 666
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+ + ++A + I K +SM G E ++ L ++G + +A+ ++
Sbjct: 667 TYGSAISAAASLANI-KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFND 725
Query: 305 M 305
M
Sbjct: 726 M 726
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 162/323 (50%), Gaps = 17/323 (5%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFADYVDVIK 59
+ SWN +I + + R+M + P+ +T + VL I +YV
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV---- 179
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K++H +G D++ + + LI++Y+K +E + ++F + +KD ++W ++I+G Q
Sbjct: 180 -KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQ 238
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NGL +E + F M ++I P SS++ A + LG+QLH +I+ GF ++
Sbjct: 239 NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYV 298
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ +Y++ + A IF M+ D VS+ ++I G G + A+ LF +M++D +
Sbjct: 299 CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL 358
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ + ++L+AC+ G + K + K G++ ++ DL + ++ A+
Sbjct: 359 KPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLDLYSKCADVETAH 417
Query: 300 EFISNMHAGPTENV--WLTLLSA 320
+F TEN+ W +L A
Sbjct: 418 KFFLXT---ETENIVLWNVMLVA 437
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 2/246 (0%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + G D + SL++ Y + + ++F + SWN +I V
Sbjct: 80 LHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKS 139
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ FR+ML I P +F+ ++ AC + KQ+H GFD + +A+
Sbjct: 140 NFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN 199
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D+Y+K G I A+ +F+ + + DIV+W A+I G + +G +AI LF M + P
Sbjct: 200 LLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFP 259
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+VL+A + L + + + +G + L R+ KL A
Sbjct: 260 TPYVLSSVLSASTKIQLFELG-EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 302 ISNMHA 307
S M++
Sbjct: 319 FSTMNS 324
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
++ + ++ ++ C +L +LH I ++GFD + SL+D Y + G+ A
Sbjct: 54 VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+FD+ + SW +I + LF +M +G+ PN F VL AC
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGD 173
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ +S T YG S + DL + G ++ A
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/499 (39%), Positives = 307/499 (61%), Gaps = 35/499 (7%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++VSWN ++ G R+G ++EA+ + +++ ++ PD T+SSVLP D + G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA---------------- 107
HGY I+ GL + C+ S++I+MY K V LF + +A
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 108 -------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+SW SIIAGC QNG E L+ FR+M +A +KP HV+ S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PAC ++ L G+ HG +R DN+ + S+L+DMYAKCG I L++ +F+ M ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
V W +++ G ++HG A + +S+FE + + +KP+ ++F ++L+AC GL D+ W YF
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M+++YGI P EHY+ + +LLGRAGKLQEAY+ I M P VW LL++CR+ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
LA AEK+F ++P N G YV+LSN YAA W + S+R M + G+KK P CSWI+VK
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
N+ Y +AGDKSHP +I E + E+ + M + G+ P+ LHDVEE++++ +L+ HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 449 RLAIVFGIICTPDGTTIRI 467
+LA+VFG++ TPDGT +++
Sbjct: 695 KLAVVFGLLNTPDGTPLQV 713
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 180/396 (45%), Gaps = 76/396 (19%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + S++++I L + L+ +++ + +M + L PDS L ++ + A+ G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
K+IH + GLD + + S+ +MY +C R+ D+ ++F + KD
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 108 ----------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
+SWN I++G ++G E + F+++ P V+
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++P+ L++G+ +HG +I+ G + + S+++DMY K G++ +F++ ++
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 206 HD-----------------------------------IVSWTAVIMGNALHGNAHDAISL 230
+ +VSWT++I G A +G +A+ L
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M+ GVKPN V ++L AC + + S + + + + +A+ D+
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYA 434
Query: 291 RAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ G++ + + + NM PT+N+ W +L++ +H
Sbjct: 435 KCGRINLS-QIVFNMM--PTKNLVCWNSLMNGFSMH 467
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K + H ++ G + I + LI Y+ D+ + +P S++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ LF + + F +M + P ++ CA L+ +GKQ+H +G D + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+ MY +CG + AR +FD+M D+V+ +A++ A G + + + +ME G
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
++ N V++ +L+ + +G +A F +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV WN+++ G + +G +E ++I + LKPD + +S+L +G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC- 117
K + +G+ + S ++N+ + ++++++ L +P + D+ W +++ C
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 118 VQNGL 122
+QN +
Sbjct: 569 LQNNV 573
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 314/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++ SW ++ G ++G EA+ + +M PD L + + +G
Sbjct: 102 MQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQG 161
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EIH A G+D+++ +++INMY KC + ++ +F +P K+ ISW+++IA QN
Sbjct: 162 REIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQN 221
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L DE L FF+ M ++ +++ S++ A + L LGK LH I+ G D ++ +
Sbjct: 222 ELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVG 281
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY KCG+ AR +FD M ++VSW A++ +G + +A++LF+ M+ +GV+
Sbjct: 282 NTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVR 341
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + FV +L CSH+G A S+F M +D+GI P H+ + D+LGR+GKL+EA E
Sbjct: 342 PNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEE 401
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M +W +LL AC HK+ + A + AE+ F +P AY++LSN YAA ++
Sbjct: 402 LIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKK 461
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +AA +R M G++K SWIE+ + + FVAGD HP RI + L+ L+ M
Sbjct: 462 WDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRI 521
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
+GY PD K V+H +EEE+K +L+YHSE+LA+ FGI TP T + I+KNLRVC DCH+A
Sbjct: 522 KGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSA 581
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFIS + R I VRD++RFHHF+ G+CSCGDYW
Sbjct: 582 IKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 179/378 (47%), Gaps = 24/378 (6%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+ W + ++ EA++++ Q G D L ++ A + +G+ IH
Sbjct: 9 ITKWLSPVLECGGVDAIREAVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGRRIHR 65
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ LD + + L++MY KC + ++ R+F + K+ SW ++AG VQ+G E
Sbjct: 66 WMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVE 125
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F +M P V+ + +C L G+++H G D ++ A+++++
Sbjct: 126 AIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIIN 185
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY KCG+I A +F +M +++SW+ +I + A +A+ F+ M+++G++ + +
Sbjct: 186 MYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRIT 245
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+V+VL A + G ++ + + G+ S + ++ G+ G +A + +M
Sbjct: 246 YVSVLDAYTSVGALELGKALHVRIVY-AGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM 304
Query: 306 HAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMID--------PNNMGAYVILSNTY 355
+NV W +L+A +N G+ E + + D PN++ +V +
Sbjct: 305 ---VEKNVVSWNAMLAA--YGQN----GRSREALALFDSMDLEGVRPNDI-TFVTILYCC 354
Query: 356 AAARRWKDAASLRVFMRN 373
+ + ++KDA S V MR
Sbjct: 355 SHSGKFKDAVSHFVEMRQ 372
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/546 (37%), Positives = 325/546 (59%), Gaps = 36/546 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV--- 57
MP DLV+W ++ A G E A QM NL F+ +S+L + DV
Sbjct: 111 MPERDLVAWTAMLAANAERGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAA 166
Query: 58 ------------------IKGKEIHGYAIR--HGLDA----NVCIGSSLINMYAKCARVE 93
+ G + G +R D+ ++ +++++ YA +
Sbjct: 167 GRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLR 226
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM-----LIAKIKPRHVSFSSI 148
+ +F +P +D ISW +++A V+N L +E + F +M L + P V+F ++
Sbjct: 227 YTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITL 286
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC+ L L G+++H + GFD ++ ++++L++ Y +CG + A+ +FD M D+
Sbjct: 287 LDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDV 346
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SW+++I A G +A+ L+ +M +G P+ + F++VL ACS++G+++ + +F S
Sbjct: 347 ISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRS 406
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
+ D + P+ EHYA + D+LGRAGKL++A + + M P +++T+LSAC+++ +VE
Sbjct: 407 IVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVE 466
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
AE +F +DP N Y+ L+N Y+AA+R KDAA +R M +G+KK P CSWIEV
Sbjct: 467 RGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVL 526
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
++ + F+AGDK HP I ++ L +M++ GY DTK VL DVEE++K+NLL+YHSE
Sbjct: 527 DRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSE 586
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LAI FG+I TP G +RI+KNLRVC DCH A K ISK+ REI+VRD +RFHHF++G C
Sbjct: 587 KLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMC 646
Query: 509 SCGDYW 514
SC DYW
Sbjct: 647 SCNDYW 652
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 148/366 (40%), Gaps = 60/366 (16%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-----DSFTLSSVLPIFADYVDVIK 59
D SW ++ AR+G A + +M +L +F LS D ++
Sbjct: 22 DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ 81
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+++ + I ++ + A + +ED+ F +P +D ++W +++A +
Sbjct: 82 ERDLIAWTI-------------MLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAE 128
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH---------------------LTTL 158
G + + F QM + S++S++ A T +
Sbjct: 129 RGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAM 184
Query: 159 HLGKQLHGCIIR--NGFDD----NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
G L G ++R FD ++ +++L YA G++R R IF +M D++SW
Sbjct: 185 LTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWA 244
Query: 213 AVIMGNALHGNAHDAISLFEQMEK-----DGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++ + ++ LF++M + G+ PN V F+ +L ACS G + + +
Sbjct: 245 TMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEG-RKIH 303
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA----CRV 323
+ + G A+ + GR G L +A M + W +++SA RV
Sbjct: 304 AAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVIS-WSSMISAFAQRGRV 362
Query: 324 HKNVEL 329
+ +EL
Sbjct: 363 DEAMEL 368
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
D + F +L +YA+ G++ A+ +FD+M + SWTA++ AL G+ +A +LF+
Sbjct: 20 DRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDT 79
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA- 292
M++ + +A+ +LT + I+ A +F+ M P + A A L A
Sbjct: 80 MQERDL----IAWTIMLTVLATFSNIEDAKYHFDQM-------PERDLVAWTAMLAANAE 128
Query: 293 -GKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
G+++ A E M P N+ W +LLSA +V+ AG+V + +
Sbjct: 129 RGQMENARETFDQM---PERNLFSWTSLLSAYGRSGDVKAAGRVFDSM 173
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 316/518 (61%), Gaps = 9/518 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK---GK 61
D+VSWN + ++ EAL + +M ++P T + L A Y GK
Sbjct: 419 DVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGK 478
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQ 119
I GL+ + + ++ +NMYAKC + D+ +F + +D I+WNS++A
Sbjct: 479 RIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGH 538
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+GL E + F+ M K +KP V+F +++ A T++ G+++H ++ NGF+ +
Sbjct: 539 HGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTV 598
Query: 179 IASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
I ++LL+MYAKCG++ A+ IFDK + D+++WT++I G A +G A A+ LF M++
Sbjct: 599 IQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQ 658
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV+PN V F++ LTAC+H G +++ + MT D+GI P+ +H++ + DLLGR G+L
Sbjct: 659 QGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLD 718
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA + + W+ LL AC+ K +E + AE+I +DP +Y++L++ YA
Sbjct: 719 EAEKLLERTSQADV-ITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYA 777
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA RW +AA++R M +KG++ P CS +EV + ++F AGDKSHP I L+ L
Sbjct: 778 AAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHW 837
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ GYV DT VLHDV +E K+ LL HSE+LAI FG++ TP G+ +R+IKNLRVC D
Sbjct: 838 SIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSD 897
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHTA K ISK+ R+I++RD+SR+HHF G CSCGDYW
Sbjct: 898 CHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 173/372 (46%), Gaps = 36/372 (9%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-DSFTLSSVLP--IFADYVDVIKGK 61
D+V+WN +I RNG EAL + R M P +S T SVL + A + + +
Sbjct: 209 DVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVR 268
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL----PVKDAISWNSIIAGC 117
IHG + G++ + ++L++ Y K ++D+ +F P ++ +++I+ C
Sbjct: 269 AIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISAC 328
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-----TTLHLGKQLHGCIIRNG 172
QNG E L+ F M + KP V+ S++ AC+ L T L + + + +
Sbjct: 329 WQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAME---VVSA 385
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
DN+ + ++LL YA+ ++ AR FD + D+VSW A+ H + +A+ LFE
Sbjct: 386 TRDNV-LGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFE 444
Query: 233 QMEKDGVKPNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
+M +GV+P+ F+ LTAC+ A I K S+ ++ G+ A +
Sbjct: 445 RMLLEGVRPSVATFITALTACAAYPPQTASAIGK---RIQSLLEEAGLEGDTAVANATLN 501
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIF-------M 339
+ + G L +A + + + W ++L+A H GK A ++F +
Sbjct: 502 MYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHG----LGKEAFELFQAMEAEKL 557
Query: 340 IDPNNMGAYVIL 351
+ PN + +L
Sbjct: 558 VKPNKVTFVAVL 569
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P + LV+ + +I +NG +E+L + M KP TL SVL + +++
Sbjct: 314 PSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVL----NACSMLQVG 369
Query: 62 EIHGYAIRHGLDA-----NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ + ++ + +G++L+ YA+ + + F + D +SWN++ A
Sbjct: 370 SATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAA 429
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL---TTLHLGKQLHGCIIRNGF 173
+Q+ E L F +ML+ ++P +F + + ACA T +GK++ + G
Sbjct: 430 YLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGL 489
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLF 231
+ + +A++ L+MYAKCG++ AR +F+++ D ++W +++ HG +A LF
Sbjct: 490 EGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELF 549
Query: 232 EQMEKDG-VKPNSVAFVAVLTACS 254
+ ME + VKPN V FVAVL A +
Sbjct: 550 QAMEAEKLVKPNKVTFVAVLDAST 573
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 134/257 (52%), Gaps = 13/257 (5%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
S +I +G ++A+ + +M ++P+ L +++ + ++ G+ IH
Sbjct: 111 SCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRIHSQI 167
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP---VKDAISWNSIIAGCVQNGLFD 124
+ N +G++LI+MY+KC + D+ + F LP +D ++WN++I+ ++NG
Sbjct: 168 SDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAR 227
Query: 125 EGLKFFRQM-LIAKIKPRHVSFSSIMPAC--AHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E L+ FR M P V+F S++ +C A L +L + +HG I+ G + F+ +
Sbjct: 228 EALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRT 287
Query: 182 SLLDMYAKCGNIRLARCIF----DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+L+D Y K G++ A +F D+ +V+ +A+I +G +++ LF M +
Sbjct: 288 ALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLE 347
Query: 238 GVKPNSVAFVAVLTACS 254
G KP+ V V+VL ACS
Sbjct: 348 GTKPSGVTLVSVLNACS 364
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 143/273 (52%), Gaps = 15/273 (5%)
Query: 59 KGKEIHGYAIRHGLDAN--VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+G+ +H + + +D + + S LI M+AKC + ++ L S ++I
Sbjct: 61 QGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSCTAMIRA 118
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+++G D+ ++ F +M +++P + +++ AC+ L L G+++H I F++N
Sbjct: 119 WMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEEN 175
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKM---DLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ ++L+ MY+KCG++ A+ FD++ D+V+W A+I +G+A +A+ LF
Sbjct: 176 SVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRD 235
Query: 234 MEKDGV-KPNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M++DG PNSV FV+VL +C AGL+ + + GI A+ D G+
Sbjct: 236 MDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGK 295
Query: 292 AGKLQEAYE-FISNMHAGPTENVWL--TLLSAC 321
G L +A+E F+ P+ ++ ++SAC
Sbjct: 296 LGSLDDAWEVFLRKGDEEPSTSLVTCSAMISAC 328
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFD--DNMFIASSLLDMYAKCGNIRLARCIFD 201
++ ++ AC L L G++LH I+ D ++ F+AS L+ M+AKCGN+ A + D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+ + S TA+I HG A+ LF++ME V+PN A +A++ ACS G
Sbjct: 105 R--FASVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLG 155
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 332/564 (58%), Gaps = 50/564 (8%)
Query: 1 MPVSDLVSWNTVIVGLAR-NGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVI 58
+P + +WNTVI LA + +AL + QM ++P+ FT SVL A +
Sbjct: 75 LPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLA 134
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------- 99
+GK++HG ++ GL + + ++L+ MY C +ED++ LF
Sbjct: 135 EGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERG 194
Query: 100 -------CLLPV---------------------KDAISWNSIIAGCVQNGLFDEGLKFF- 130
C + V + +SWN +I+G QNG + E ++ F
Sbjct: 195 REFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFH 254
Query: 131 RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
R M + + P V+ S++PA + L L LGK +H +N + + S+L+DMYAKC
Sbjct: 255 RMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKC 314
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G+I A +F+++ +++++W AVI G A+HG A+D + +MEK G+ P+ V ++A+L
Sbjct: 315 GSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAIL 374
Query: 251 TACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPT 310
+ACSHAGL+D+ S+FN M G+ P EHY + DLLGRAG L+EA E I NM P
Sbjct: 375 SACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPD 434
Query: 311 ENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVF 370
+ +W LL A ++HKN+++ + AE + + P++ GAYV LSN YA++ W A++R+
Sbjct: 435 DVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLM 494
Query: 371 MRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEV 430
M++ ++K P CSWIE+ + F+ D SH I+ L+E+ ++ EG++PDT +V
Sbjct: 495 MKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQV 554
Query: 431 LHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQR 490
L ++E+ K+++L+YHSE++A+ FG+I TP T + I+KNLR+C DCH+++K ISK+ +R
Sbjct: 555 LLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYER 614
Query: 491 EIIVRDNSRFHHFEDGKCSCGDYW 514
+I++RD RFHHFE G CSC DYW
Sbjct: 615 KIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 60/319 (18%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--FCLLPVKDAISWNSIIAGC- 117
K++H + ++ G + I + ++ + A + + L F LP ++ +WN++I
Sbjct: 32 KQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALA 91
Query: 118 -VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+ D L F + + A ++P +F S++ ACA + L GKQ+HG +++ G D+
Sbjct: 92 ETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDD 151
Query: 177 MFIASSLLDMYAKC---------------------------------------------- 190
F+ ++LL MY C
Sbjct: 152 EFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYAR 211
Query: 191 -GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVA 248
GN++ AR +FD+M +VSW +I G A +G +AI +F +M + G V PN V V+
Sbjct: 212 VGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVS 271
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
VL A S G+++ W + + I +A+ D+ + G +++A + +
Sbjct: 272 VLPAISRLGVLELGKWVHLYAEKNKIRIDDVLG--SALVDMYAKCGSIEKAIQVFERL-- 327
Query: 308 GPTENV--WLTLLSACRVH 324
P NV W ++ +H
Sbjct: 328 -PQNNVITWNAVIGGLAMH 345
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/465 (43%), Positives = 292/465 (62%), Gaps = 15/465 (3%)
Query: 63 IHGYAIRHGL-----------DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN 111
IHG+A+R + + ++ ++++ YAK ++ + LF + +D + WN
Sbjct: 100 IHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 159
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I G QNG+ +E L FR+ML AK KP V+ S++ AC L L G+ +H I N
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 219
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G N+ + ++L+DMY+KCG++ AR +FDK+D D+V+W ++I+G A+HG + +A+ LF
Sbjct: 220 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLF 279
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
+ M + G+ P ++ F+ +L+AC H+G + + W FN M +YGI P EHY + +LLGR
Sbjct: 280 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 339
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPN--NMGAYV 349
AG +++AYE + NM+ P +W TLL ACR+H + L K+ E ++D N N G Y+
Sbjct: 340 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVE--LLVDQNLANSGTYI 397
Query: 350 ILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINE 409
+LSN YAA W A LR M++ G+KK P CS IEV NK + F+AG +HP I
Sbjct: 398 LLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYM 457
Query: 410 ALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIK 469
L+E+ ++ GY P T VLHD+ E +K+ L HSE+LAI FG+I T GTTI+I+K
Sbjct: 458 MLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVK 517
Query: 470 NLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
NLRVC DCH K ISKI R+I+VRD +RFHHF +G CSCGDYW
Sbjct: 518 NLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 20/285 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V WN +I G +NG+ EAL + R+M KP+ T+ SVL + G
Sbjct: 150 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 209
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y +G+ NV +G++L++MY+KC +ED+ +F + KD ++WNS+I G +
Sbjct: 210 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMH 269
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L+ F+ M + P +++F I+ AC H G G I N D I
Sbjct: 270 GFSQEALQLFKSMCRMGLHPTNITFIGILSACG-----HSGWVTEGWDIFNKMKDEYGIE 324
Query: 181 SS------LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ 233
++++ + G++ A + M++ D V W ++ LHG I+L E+
Sbjct: 325 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK----IALGEK 380
Query: 234 MEK---DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+ + D NS ++ + + G D + +M KD G+
Sbjct: 381 IVELLVDQNLANSGTYILLSNIYAAVGNWDGV-ARLRTMMKDSGV 424
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q+H + R+G D + + L YA G + + +F + + WTA+I G+AL G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+ A LF+ M + + V+ A+LT + G +D A F+ M + G+ +
Sbjct: 108 DVVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGVC-----W 158
Query: 283 AAVADLLGRAGKLQEAYEFISNM---HAGPTENVWLTLLSAC 321
+ D + G EA M A P E L++LSAC
Sbjct: 159 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSAC 200
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/499 (40%), Positives = 305/499 (61%), Gaps = 2/499 (0%)
Query: 18 RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVC 77
+G+ + L M ++ P + S +L A + G+ H ++ G + ++
Sbjct: 7 ESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMI 66
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDA--ISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
+ + L++ YAK VE++ LF + +++ ++WN++I+ VQ G F + F+QM
Sbjct: 67 LQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQS 126
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
+KP V+ S++ ACAHL L +G+ +HG I ++ + ++L+DMY KCG +
Sbjct: 127 ENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEA 186
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +F + +I W ++I+G ++G +AI+ F MEK+G+KP+ V FV +L+ CSH
Sbjct: 187 AIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSH 246
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL 315
+GL+ YF+ M YG+ P EHY + DLLGRAG L+EA E I M P V
Sbjct: 247 SGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLG 306
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
+LL AC++HK+ +L +V +++ +DP + G YV LSN YA+ RW D + R M +G
Sbjct: 307 SLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRG 366
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE 435
+ KTP CS IEV N + FVAGD SHP + +IN L E+ + ++ +G+VP+T VLHD+E
Sbjct: 367 VHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIE 426
Query: 436 EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVR 495
EE+K+ + YHSER+A+ FG++ TP G TIR++KNLR C DCH+A+K IS +REIIVR
Sbjct: 427 EEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVR 486
Query: 496 DNSRFHHFEDGKCSCGDYW 514
D RFHHF +G CSC DYW
Sbjct: 487 DRKRFHHFRNGSCSCNDYW 505
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 33/251 (13%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S+ V+WNT+I + G + A+++ +QM + N+KP T+ S+L A + G+ I
Sbjct: 96 SNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI 155
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HGY L +V +G++LI+MY KC +E + +F L K+ WNSII G NG
Sbjct: 156 HGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRG 215
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E + F M IKP V+F I+ C+H L G++ S +
Sbjct: 216 EEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYF---------------SEM 260
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L +Y + C+ D ++G A G +A+ L M +KPNS
Sbjct: 261 LGVYGLEPGVEHYGCMVD-------------LLGRA--GYLKEALELIRAMP---MKPNS 302
Query: 244 VAFVAVLTACS 254
+ ++L AC
Sbjct: 303 MVLGSLLRACQ 313
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 5/186 (2%)
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+++G+ + L F+ ML + P SFS I+ +CA LG+ H I++ GF+ +M
Sbjct: 6 LESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDM 65
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ + LLD YAK G + AR +FD M + V+W +I G AIS+F+QM+
Sbjct: 66 ILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQ 125
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+ VKP V V++L+AC+H G +D W + TK I + A+ D+ + G
Sbjct: 126 SENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGN--ALIDMYCKCGA 183
Query: 295 LQEAYE 300
L+ A +
Sbjct: 184 LEAAID 189
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 317/518 (61%), Gaps = 9/518 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK---GK 61
D+VSWN + ++ EAL + +M ++P T + L A Y GK
Sbjct: 285 DVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGK 344
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVK-DAISWNSIIAGCVQ 119
I GL+ + + ++ +NMYAKC + D+ +F + P + D I+WNS++A
Sbjct: 345 RIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGH 404
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+GL E + F+ M K +KP V+F +++ A T++ G+++H ++ NGF+ +
Sbjct: 405 HGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTV 464
Query: 179 IASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
I ++LL+MYAKCG++ A+ IFDK + D+++WT+++ G A +G A A+ LF M++
Sbjct: 465 IQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQ 524
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV+PN + F++ LTAC+H G +++ + MT D+GI P+ +H++ + DLLGR G+L
Sbjct: 525 QGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLD 584
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA + + W+ LL AC+ K +E + AE+I +DP +Y++L++ YA
Sbjct: 585 EAEKLLERTSQADV-ITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYA 643
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA RW +AA++R M +KG++ P CS +EV + ++F AGDKSHP I L+ L
Sbjct: 644 AAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHW 703
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ GYV DT VLHDV +E K+ LL HSE+LAI FG++ TP G+ +R+IKNLRVC D
Sbjct: 704 SIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSD 763
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHTA K ISK+ R+I++RD+SR+HHF G CSCGDYW
Sbjct: 764 CHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 176/377 (46%), Gaps = 46/377 (12%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-DSFTLSSVLP--IFADYVDVIKGK 61
D+V+WN +I RNG EAL + R M + P +S T SVL + A + + +
Sbjct: 75 DVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVR 134
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL----PVKDAISWNSIIAGC 117
IHG + G++ + ++L++ Y K ++D+ +F P ++ +++I+ C
Sbjct: 135 AIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISAC 194
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-----TTLHLGKQLHGCIIRNG 172
QNG E L+ F M + KP V+ S++ AC+ L T L + + + +
Sbjct: 195 WQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAME---VVSA 251
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
DN+ + ++LL YA+ ++ AR FD + D+VSW A+ H +A+ LFE
Sbjct: 252 TRDNV-LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFE 310
Query: 233 QMEKDGVKPNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVAD 287
+M +GV+P+ F+ LTAC+ A I K S+ ++ G+ A +
Sbjct: 311 RMLLEGVRPSVATFITALTACAAYPPQTASAIGK---RIQSLLEEAGLEGDTAVANATLN 367
Query: 288 LLGRAGKLQEA---YEFISNMHAGPTEN---VWLTLLSACRVHKNVELAGKVAEKIF--- 338
+ + G L +A +E IS PT W ++L+A H GK A ++F
Sbjct: 368 MYAKCGSLADARAVFERIS-----PTRRDCITWNSMLAAYGHHG----LGKEAFELFQAM 418
Query: 339 ----MIDPNNMGAYVIL 351
++ PN + +L
Sbjct: 419 EAEKLVKPNKVTFVAVL 435
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 17/265 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSV------LPIFADYV 55
P + LV+ + +I +NG +E+L + M KP TL SV LP+ +
Sbjct: 180 PSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATA 239
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
V++ A R + +G++L+ YA+ + + F + D +SWN++ A
Sbjct: 240 FVLEQAMEVVSATRDNV-----LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAA 294
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL---TTLHLGKQLHGCIIRNG 172
+Q+ E L F +ML+ ++P +F + + ACA T +GK++ + G
Sbjct: 295 AYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAG 354
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISL 230
+ + +A++ L+MYAKCG++ AR +F+++ D ++W +++ HG +A L
Sbjct: 355 LEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFEL 414
Query: 231 FEQMEKDG-VKPNSVAFVAVLTACS 254
F+ ME + VKPN V FVAVL A +
Sbjct: 415 FQAMEAEKLVKPNKVTFVAVLDAST 439
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 10/230 (4%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
+ ++P+ L +++ + ++ G+ IH + N +G++LI+MY+KC + D
Sbjct: 1 MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60
Query: 95 SHRLFCLLP---VKDAISWNSIIAGCVQNGLFDEGLKFFRQM-LIAKIKPRHVSFSSIMP 150
+ + F LP +D ++WN++I+ ++NG E L+ FR M P V+F S++
Sbjct: 61 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120
Query: 151 AC--AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF----DKMD 204
+C A L +L + +HG I+ G + F+ ++L+D Y K G++ A +F D+
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+V+ +A+I +G +++ LF M +G KP+ V V+VL ACS
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+++P + +++ AC+ L L G+++H I F++N + ++L+ MY+KCG++ A
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 197 RCIFDKM---DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV-KPNSVAFVAVLTA 252
+ FD++ D+V+W A+I +G+A +A+ LF M+ DG PNSV FV+VL +
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121
Query: 253 CSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE-FISNMHAGPT 310
C AGL+ + + GI A+ D G+ G L +A+E F+ P+
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181
Query: 311 ENVWL--TLLSAC 321
++ ++SAC
Sbjct: 182 TSLVTCSAMISAC 194
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 319/521 (61%), Gaps = 9/521 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFT----LSSVLPIFADYVDV 57
PV ++ WN ++ LA EEAL + MG + + DS++ L + + A ++
Sbjct: 311 PVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPA 370
Query: 58 -IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ +E+H +AIR G + + ++LI+ YAK V + R+F +P ++ +SW+++I
Sbjct: 371 SARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGC 430
Query: 117 CVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+N + ++ F++M+ A + P ++ S++ ACA + L GK LH I+R GFD
Sbjct: 431 YAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFD 490
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ + ++L+ MY KCG + R IF+ + ++VSW ++I G +HG +++ +FE+
Sbjct: 491 LLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEE 550
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M ++G+ PN + FV+VL ACSH GL+++ F SM +Y + P EHYA + DLLGRAG
Sbjct: 551 MIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGRAG 609
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
+L EA E I +M P+ VW +LL ACR+H +VE A +F ++P N G YV+L++
Sbjct: 610 RLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLAD 669
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YA A+ L+ + ++K P CSWIEVK K Y+FV+ D +P + + E
Sbjct: 670 IYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGE 729
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
+ +M+ EGYVPDT+ VL+D+EEE+K+ +L HSE+LA+ FG+I T G IRI KNLR+
Sbjct: 730 FVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRL 789
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCH+ KFISK REI+VRD +RFHHF +G CSC DYW
Sbjct: 790 CEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 118/227 (51%), Gaps = 4/227 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP +LVSW+ +I A+N +A+ I ++M + +L P+S T+ SVL A +
Sbjct: 416 MPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALG 475
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGC 117
+GK +H Y +R G D V + ++L+ MY KC +E +F + ++ +SWNS+I+G
Sbjct: 476 QGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGY 535
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G E L+ F +M+ I P ++F S++ AC+H+ + GK+L ++
Sbjct: 536 GMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRA 595
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ ++D+ + G + A + M + W +++ +HG+
Sbjct: 596 EHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGH 642
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + LI YA + + + ++F PVK+ WN+++ +E L M
Sbjct: 286 LSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLG 345
Query: 138 IKPRHVSFSSIMPACAHLTTLHLG-----KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
+ S++ + AC + HL +++H IR G+ + +A++L+D YAK G
Sbjct: 346 VPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGI 405
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK--PNSVAFVAVL 250
+ A +F M ++VSW+A+I A + DAI +F++M PNS+ V+VL
Sbjct: 406 VSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVL 465
Query: 251 TACS 254
AC+
Sbjct: 466 HACA 469
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARC 198
P ++ S++ A A L +H + + F + F+++ L++ YA + AR
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQ 305
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+FD+ + +I W A++ AL + +A++ M + GV +S ++ L AC
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKAC 360
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 322/518 (62%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VSWN+++ GLA+ G E L++ +M + LK + FT SV+ +
Sbjct: 106 MPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE 165
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGC 117
G +H A++ GL V + ++L+NMY K VE + RLF +P K +SWNSI+A C
Sbjct: 166 GYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVC 225
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
QNG+ +E F M + P + S++ AC + + + LHG I G D+N+
Sbjct: 226 AQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENL 285
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EK 236
I ++LL++Y+K G + +R +F+++ D V+WTA++ G A+HG +AI FE++ +
Sbjct: 286 TIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVRE 345
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G++P+ V F +L+ACSH+GL+ + +F M+ Y + P +HY+ + DLLGR G L
Sbjct: 346 EGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLD 405
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+A+E I NM P VW LL ACRVH+N++L + A+ + +DP++ Y++LSN Y+
Sbjct: 406 DAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYS 465
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA W DA+ +R M+NK + + CS+IE NK + FV D +HP HRI++ L+E+++
Sbjct: 466 AAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMK 525
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+++ G+V +T+ +LHDV+EE K +++ HSE++A+ +G++ T + IIKNLR+C D
Sbjct: 526 KIQDVGFVHETESILHDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRD 585
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH +KF+S + +R II+RD RFH F G CSCGDYW
Sbjct: 586 CHNTVKFVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH + I+ + IG L++ Y K +D++ LF +P KD +SWNS+++G + G
Sbjct: 67 IHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQ 126
Query: 123 FDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E L F +M +++K +F S++ AC G +H C ++ G + + +
Sbjct: 127 LGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVN 186
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+L++MY K G + A +F +M + IVSW +++ A +G ++A + F+ M +G
Sbjct: 187 ALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGF 246
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V++L AC + L + + + G+ + + +L + G+L +
Sbjct: 247 FPDDATMVSLLQACENFPL-GRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSR 305
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ + + P + W +L+ +H + A + E+I
Sbjct: 306 KVFEEI-SKPDKVAWTAMLAGYAMHGCGKEAIEFFERI 342
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 323/515 (62%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V +N++ G +R E ++ ++ + PD++T S+L A + +G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++ GLD NV + +LINMY +C V+ + +F + + +N++I G +
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARR 208
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FR+M +KP ++ S++ +CA L +L LGK +H ++ F + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DM+AKCG++ A IF+KM D +W+A+I+ A HG A ++ +FE+M + V+
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH G +++ YF+ M +GI PS +HY ++ DLL AG L++AYE
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYE 388
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W LL+AC H N++LA KV+E+IF +D ++ G YVILSN YA ++
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ SLR M+++ K P CS IEV N + F +GD +++ AL E+++ ++
Sbjct: 449 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT V+H ++ +++K+ L YHSE+LAI FG++ TP GTTIR++KNLRVC DCH
Sbjct: 509 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 568
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS I R+++ RD RFHHFEDGKCSCGD+W
Sbjct: 569 AAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 66/307 (21%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
Q+ I++ +D F+A L++ + ++ AR +F+ M DIV + ++ G +
Sbjct: 47 QIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA----------------GLIDKAW 263
N + SLF ++ +DG+ P++ F ++L AC+ A GL D +
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 264 ---SYFNSMTK-----------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA-- 307
+ N T+ D + P Y A+ R + EA M
Sbjct: 166 VCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 308 -GPTENVWLTLLSACRVHKNVELAG---KVAEKIFMIDPNNMGAYV----ILSNTYAAAR 359
P E L++LS+C + +++L K A+K ++ YV L + +A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK------HSFCKYVKVNTALIDMFAKCG 279
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
DA S+ MR K T A S + V AYA H E + ERM
Sbjct: 280 SLDDAVSIFEKMR---YKDTQAWSAMIV---AYA----------NHGKAEKSMLMFERMR 323
Query: 420 QEGYVPD 426
E PD
Sbjct: 324 SENVQPD 330
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 315/514 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLV WN +I G + + EAL++ +M + TL++VL A +
Sbjct: 364 IPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDT 423
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A + G ++ + + LI+ Y KC + ++R+F D I++ S+I Q
Sbjct: 424 RQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQC 483
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ +K F +ML + P SS++ ACA L+ GKQ+H +I+ F ++F
Sbjct: 484 DHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG 543
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAKCG+I A F + +VSW+A+I G A HG+ A+ +F +M + +
Sbjct: 544 NALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHIS 603
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +VL AC+HAGL+D+A YFNSM + +GI + EHYA + DLLGRAGKL +A E
Sbjct: 604 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAME 663
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M VW LL+A RVH++ EL AEK+F+++P G +V+L+NTYA+A
Sbjct: 664 LVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGM 723
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A +R M++ +KK PA SW+E+K+K + F+ GDKSHP I L EL + M +
Sbjct: 724 WDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTK 783
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+ + LHDV++ +K+ LL +HSERLA+ F +I TP G IR+ KNLR+C DCH A
Sbjct: 784 AGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAA 843
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFIS IV REII+RD +RFHHF DG CSC DYW
Sbjct: 844 FKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 165/318 (51%), Gaps = 10/318 (3%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW++++ + N + +AL R M + +++ + F L VL D G ++H
Sbjct: 69 VSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPD---AGFGTQLHAL 125
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQNGLFDE 125
A+ GL ++ + ++L+ MY V+++ +F ++ +SWN +++ V+N
Sbjct: 126 AMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSH 185
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+K F +M+ ++P FS ++ AC L G+++H +IR G+D ++F A++L+D
Sbjct: 186 AVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVD 245
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY+K G+IR+A +F K+ D+VSW A I G LHG+ A+ L QM+ G+ PN
Sbjct: 246 MYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFT 305
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
++L AC+ +G + M K + ++ + V D+ + G L +A + +
Sbjct: 306 LSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLV-DMYAKHGLLDDAKKVFDWI 364
Query: 306 HAGPTEN--VWLTLLSAC 321
P + +W L+S C
Sbjct: 365 ---PQRDLVLWNALISGC 379
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 138/251 (54%), Gaps = 2/251 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+ VSWN ++ +N A+ + +M ++P+ F S V+ D+ G+++H
Sbjct: 166 NTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVH 225
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR G D +V ++L++MY+K + + +F +P D +SWN+ I+GCV +G
Sbjct: 226 AMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQ 285
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ QM + + P + SSI+ ACA +LG+Q+HG +++ D + +IA L+
Sbjct: 286 HALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLV 345
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGVKPNS 243
DMYAK G + A+ +FD + D+V W A+I G + HG H +A+SLF +M K+G N
Sbjct: 346 DMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCS-HGAQHAEALSLFCRMRKEGFDVNR 404
Query: 244 VAFVAVLTACS 254
AVL + +
Sbjct: 405 TTLAAVLKSTA 415
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 177/359 (49%), Gaps = 16/359 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +D+VSWN I G +G + AL ++ QM + L P+ FTLSS+L A G
Sbjct: 263 VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLG 322
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG+ ++ D++ I L++MYAK ++D+ ++F +P +D + WN++I+GC
Sbjct: 323 RQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHG 382
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L F +M + ++++ + A L + +Q+H + GF + +
Sbjct: 383 AQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVV 442
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D Y KC + A +F+K +DI+++T++I + + DAI LF +M + G+
Sbjct: 443 NGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLD 502
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ ++L AC+ ++ + K ++ F A V + G +++A
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVY-TYAKCGSIEDADL 561
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF--MID----PNNMGAYVIL 351
S + P + V W ++ H + GK A +F M+D PN++ +L
Sbjct: 562 AFSGL---PEKGVVSWSAMIGGLAQHGH----GKRALDVFHRMVDEHISPNHITMTSVL 613
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 128/285 (44%), Gaps = 12/285 (4%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T+ +L +A +++G IH + ++ GL A + L++ Y+KC + R+F +
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S++ N + + L FR M ++ ++ CA G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA--PDAGFGT 120
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
QLH + G ++F+A++L+ MY G + AR +FD+ + VSW ++ +
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
A+ +F +M GV+PN F V+ AC+ + ++ A ++M G
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE-AGRKVHAMVIRTGYDKDVFT 239
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
A+ D+ + G ++ A + P +V W +S C +H
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKV---PETDVVSWNAFISGCVLH 281
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 325/544 (59%), Gaps = 36/544 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S+L N + R GL EAL + M + ++PD ++ S + + +++ GK
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 64 HGYAIRHGLDA--NVCIGSSLINMYAKCARVEDSHRLFC--------------------- 100
HGY +R+G ++ N+C ++LI+MY KC R + + R+F
Sbjct: 360 HGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 101 ----------LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIM 149
+P K+ +SWN+II+G VQ LF+E ++ F M + + V+ SI
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC HL L L K ++ I +NG ++ + ++L+DM+++CG+ A IF+ + D+
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+WTA I A+ GNA AI LF+ M + G+KP+ VAFV LTACSH GL+ + F SM
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K +G++P HY + DLLGRAG L+EA + I +M P + +W +LL+ACRV NVE+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AEKI ++ P G+YV+LSN YA+A RW D A +R+ M+ KG++K P S I+++
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + F +GD+SHP I L E+ +R G+VPD VL DV+E++K +L HSE+
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEK 777
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ +G+I + GTTIRI+KNLRVC DCH+ KF SK+ REII+RDN+RFH+ GKCS
Sbjct: 778 LAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCS 837
Query: 510 CGDY 513
CGD+
Sbjct: 838 CGDF 841
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 132/248 (53%), Gaps = 1/248 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I G A +GL EA+ + +M N + PD +T L A G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G ++ + +SL++ YA+C ++ + ++F + ++ +SW S+I G + + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 129 -FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FFR + ++ P V+ ++ ACA L L G++++ I +G + N + S+L+DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KC I +A+ +FD+ ++ A+ G +A+ +F M GV+P+ ++ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 248 AVLTACSH 255
+ +++CS
Sbjct: 342 SAISSCSQ 349
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 3/238 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSWNT+I GL + L+EEA+ + M + D T+ S+ +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K I+ Y ++G+ +V +G++L++M+++C E + +F L +D +W + I
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMF 178
G + ++ F M+ +KP V+F + AC+H + GK++ +++ +G
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQME 235
++D+ + G + A + + M + + V W +++ + GN A E+++
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 319/516 (61%), Gaps = 9/516 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD----VIKGKE 62
VSWNT+I G ++ G + A+ + ++M + P T ++L A + + +G++
Sbjct: 389 VSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRK 448
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGCVQ 119
+H + G + IG++++ MYA C ++++ F + D +SWN+II+ Q
Sbjct: 449 LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ 508
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G L FFR+M + + P ++ +++ ACA L G+ +H + +G + N+F+
Sbjct: 509 HGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFV 568
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
A++L MY +CG++ AR IF+K+ + D+V + A+I + +G A +A+ LF +M+++G
Sbjct: 569 ATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEG 628
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ +FV+VL+ACSH GL D+ W F SM + YGIAPS +HYA D+LGRAG L +A
Sbjct: 629 SRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADA 688
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I M PT VW TLL ACR +++V+ + +DP + AYV+LSN A A
Sbjct: 689 EELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGA 748
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W +AA +R M ++G++K SWIE+K++ + FVAGD+SHP I L+ L +
Sbjct: 749 GKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEI 808
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPDT+ VL V+E +K+ LL HSERLAI G++ + T+R++KNLRVC DCH
Sbjct: 809 REIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCH 867
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFISKIV +EI+VRD RFHHF DG CSCGDYW
Sbjct: 868 NATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 202/459 (44%), Gaps = 51/459 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSWN I A++G AL + ++M ++P TL L + A + + + IH
Sbjct: 192 DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIH 248
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GL+ + + ++L + YA+ + + +F +D +SWN+++ Q+G
Sbjct: 249 FIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMS 308
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E F +ML I P V+ + C ++L G+ +HGC + G D ++ + ++LL
Sbjct: 309 EAALLFARMLHEGISPSKVTLVNASTGC---SSLRFGRMIHGCALEKGLDRDIVLGNALL 365
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY +CG+ AR +F ++ + VSW +I G++ G A+ LF++M+ +G+ P
Sbjct: 366 DMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRA 424
Query: 245 AFVAVLTACSHAGLIDKAWS---YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
++ +L A + +A + +S G A AV + G + EA
Sbjct: 425 TYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA--- 481
Query: 302 ISNMHAGPTEN-----VWLTLLSACRVHKNVELAGKVAEKIFM------IDPNNMGAYVI 350
++ G E+ W ++S+ H + GK A F + PN + +
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGH----GKRALGFFRRMDLHGVAPNQITCVAV 537
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKT-----------PACSWIEVKNKAYAFVAGDK 399
L + A A + + +R+ GM+ C +E + + VA ++
Sbjct: 538 L-DACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 400 SHPFYHRI----------NEALKELLERMEQEGYVPDTK 428
++ + EALK L RM+QEG PD +
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALK-LFWRMQQEGSRPDEQ 634
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 131/254 (51%), Gaps = 4/254 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V D SW T+I +G + A+ + +M ++ D+ T +VL A D+ +G
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + + GL + + L+++Y C V + LF + +D +SWN+ IA Q+
Sbjct: 148 RSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQS 206
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G L+ F++M + ++P ++ + CA T+ + +H + +G + + ++
Sbjct: 207 GDLGIALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVS 263
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L YA+ G++ A+ +FD+ D+VSW A++ A HG+ +A LF +M +G+
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323
Query: 241 PNSVAFVAVLTACS 254
P+ V V T CS
Sbjct: 324 PSKVTLVNASTGCS 337
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 126/242 (52%), Gaps = 7/242 (2%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IH + GL+ +G+ L+ +Y KC + D +F L V+D SW +II
Sbjct: 47 QGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYT 104
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++G + F +M ++ V+F +++ ACA L L G+ +H I+ +G
Sbjct: 105 EHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSV 164
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ LL +Y CG + A +F+KM+ D+VSW A I NA G+ A+ LF++M+ +G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEG 223
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+P + V LT C+ I +A + + + ++ G+ + A+A R G L +A
Sbjct: 224 VRPARITLVIALTVCA---TIRQAQA-IHFIVRESGLEQTLVVSTALASAYARLGHLYQA 279
Query: 299 YE 300
E
Sbjct: 280 KE 281
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/497 (42%), Positives = 299/497 (60%), Gaps = 35/497 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+SWN +I G +GLY EA+ + M +PD T+SSVLP D D++ G IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCA-------------------------------RVE 93
GY I+ GL ++ C+ S+LI+MY KC+ +VE
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 94 DSHRLFCLLPVK----DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
S RLF L + + +SW S+IA C QNG E L+ FR+M IA +KP V+ ++
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLL 393
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
PAC ++ L GK H +R G ++++ S+L+DMYAKCG I+ +R FD + ++V
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
W AVI G A+HG A +A+ +F+ M++ G KP+ ++F VL+ACS +GL ++ YFNSM
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ YGI EHYA + LL RAGKL++AY I M P VW LLS+CRVH NV L
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSL 573
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
AEK+F ++P+N G Y++LSN YA+ W + +R M+NKG++K P CSWIEVKN
Sbjct: 574 GEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKN 633
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + +AGDKSHP +I E L +L M++ GY P+ VL DVEE+ K+ +L HSE+
Sbjct: 634 KVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEK 693
Query: 450 LAIVFGIICTPDGTTIR 466
LA+VFG++ TP G ++
Sbjct: 694 LAVVFGLLNTPPGYPLQ 710
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 36/313 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ S++T+I ++ + AL+ QM L PD+ L S + A +
Sbjct: 74 VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPA 133
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--------------------- 99
+++HG A G D++ + SSL++MY KC ++ D+HR+F
Sbjct: 134 RQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQ 193
Query: 100 -CLLPVK-------------DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
C+ K + ISWN +IAG +GL+ E + F M + +P +
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTI 253
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++PA L L +G +HG +I+ G + ++S+L+DMY KC +FD+MD
Sbjct: 254 SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDH 313
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+ S A I G + +G ++ LF Q++ G++ N V++ +++ CS G +A
Sbjct: 314 MDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALEL 373
Query: 266 FNSMTKDYGIAPS 278
F M + G+ P+
Sbjct: 374 FREM-QIAGVKPN 385
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ ++ H + ++ GL + + + L++ YA D+ + L+P + S++++I
Sbjct: 31 QTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFS 90
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ F L F QML + P + S + ACA L+ L +Q+HG +GFD + F
Sbjct: 91 KFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSF 150
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSL+ MY KC IR A +FD+M D+VSW+A++ A G +A LF +M G
Sbjct: 151 VQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSG 210
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
V+PN +++ ++ +H+GL +A F M
Sbjct: 211 VQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +LV WN VI G A +G +EA+ I M KPD + + VL + +G
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506
Query: 61 K-EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ + ++G++A V + ++ + ++ ++E ++ + +PV DA W ++++ C
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/543 (38%), Positives = 312/543 (57%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I A+ E+AL + +M N+ P+S T+ VL A +D+ G+ +
Sbjct: 191 DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC 250
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------------- 99
Y R G+ ++ + +++++MY KC V+D+ +LF
Sbjct: 251 SYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYD 310
Query: 100 ------CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPAC 152
+PVK+ +WN +I+ QNG E L F ++ ++KI KP V+ S + AC
Sbjct: 311 AARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC 370
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A L + LG +H I R G N + SSL+DMYAKCG++ A +F ++ D+ W+
Sbjct: 371 AQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWS 430
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G +HG AI LF +M++ VKPNSV F VL ACSHAGL+D+ +F+ M
Sbjct: 431 AMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPV 490
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YG+ P +HYA + D+LGRAG L+EA E I+ M P+ +VW LL AC +H NVEL
Sbjct: 491 YGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGEL 550
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
++++ ++P N GA V+LSN YA RW+ + LR MR+ +KK P CS IE +
Sbjct: 551 ASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVH 610
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHSERLA 451
F+ GD +HP I L+E+ +++ GY P+ +L +EE+ K+ L HSE+LA
Sbjct: 611 EFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLA 670
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I FG++ IR++KNLR+CGDCH K +S++ R+I++RD RFHHF DG CSC
Sbjct: 671 IAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCM 730
Query: 512 DYW 514
DYW
Sbjct: 731 DYW 733
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 177/384 (46%), Gaps = 45/384 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P +L +WNT+I A + ++ + + + P+ FT V+ ++
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +HG AI+ ++ I +SL+ Y C + + RLF + KD +SWNS+I+ Q
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQ 204
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
++ L+ F +M + P V+ ++ ACA L G+ + I R G ++ +
Sbjct: 205 GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTL 264
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG--------------NAL----- 220
+++LDMY KCG++ A+ +FD+M D+ SWT ++ G NA+
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 221 ------------HGNAHDAISLFEQMEKDGV-KPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+G +A+++F +++ + KP+ V V+ L+AC+ G ID + +
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIH 383
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
K GI + +++ D+ + G L++A E ++ VW +++ +H
Sbjct: 384 VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDV-YVWSAMIAGLGMHGR- 441
Query: 328 ELAGKVAEKIFM------IDPNNM 345
GK A +F + PN++
Sbjct: 442 ---GKAAIDLFFEMQEAKVKPNSV 462
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
MPV ++ +WN +I +NG +EAL I ++ + KPD TL S L A +
Sbjct: 319 MPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDL 378
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G IH Y R G+ N + SSL++MYAKC +E + +F + +D W+++IAG
Sbjct: 379 GGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGM 438
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ-LHGCIIRNGFDDNMF 178
+G + F +M AK+KP V+F++++ AC+H + G+ H G M
Sbjct: 439 HGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMK 498
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ ++D+ + G + A + ++M S W A++ +LH N
Sbjct: 499 HYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMN 544
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 320/550 (58%), Gaps = 38/550 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVI 58
+P D V+W +++ + AL+I R + + PD F +S++ A+ + V
Sbjct: 64 LPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVK 123
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------ 88
+GK++H + + SSLI+MYAK
Sbjct: 124 QGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYA 183
Query: 89 -CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML---IAKIKPRHVS 144
R ++ RLF P ++ +W ++I+G VQ+G + F +M I+ P +
Sbjct: 184 RSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDP--LV 241
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
SS++ ACA+L LGKQ+HG +I G++ +FI+++L+DMYAKC ++ A+ IF +M
Sbjct: 242 LSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMC 301
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D+VSWT++I+G A HG A +A++L+++M GVKPN V FV ++ ACSHAGL+ K +
Sbjct: 302 RKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRT 361
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
F +M +D+GI+PS +HY + DL R+G L EA I M P E W LLS+C+ H
Sbjct: 362 LFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRH 421
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
N ++A ++A+ + + P + +Y++LSN YA A W+D + +R M KK P S
Sbjct: 422 GNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSC 481
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
I++ ++ F AG+ SHP I ++EL E M + GY PDT VLHD+++++K+ L+
Sbjct: 482 IDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLF 541
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
+HSERLA+ +G++ GT IRI+KNLRVCGDCHT +K IS I REI VRD R+HHF+
Sbjct: 542 WHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFK 601
Query: 505 DGKCSCGDYW 514
DG CSC D+W
Sbjct: 602 DGNCSCNDFW 611
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K++H I+ GL+ + I ++L+N Y KC ++D+ +LF LP +D ++W S++ C
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL--GKQLHGCIIRNGFDDNM 177
+ L R +L P H F+S++ ACA+L LH+ GKQ+H + F D+
Sbjct: 82 SNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ SSL+DMYAK G R +FD + + +SWT +I G A G +A LF Q
Sbjct: 142 VVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYR 201
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
N A+ A+++ +G A+ F M
Sbjct: 202 ----NLFAWTALISGLVQSGNGVDAFHLFVEM 229
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
L K+LH II+ G + + I ++LL+ Y KCG I+ A +FD + D V+W +++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID-------KAWSYFNSMTKD 272
L H A+S+ + G P+ F +++ AC++ G++ A + + + D
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 273 YGIAPSF-EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA-CRVHKNVELA 330
+ S + YA G + ++ IS++++ W T++S R + E
Sbjct: 141 DVVKSSLIDMYAK----FGLPDYGRAVFDSISSLNSIS----WTTMISGYARSGRKFE-- 190
Query: 331 GKVAEKIFMIDP-NNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKT 379
A ++F P N+ A+ L + + DA L V MR++G+ T
Sbjct: 191 ---AFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVT 237
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 330/554 (59%), Gaps = 47/554 (8%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
S+NT+I L+ + +AL + +M + +++P+ FT SV + +G+++HG
Sbjct: 78 SYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGL 137
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL------------------------- 101
A++ GLD++ + S+++ MY C +ED+HRLF
Sbjct: 138 AVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWN 197
Query: 102 ---------------------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
+P + +SWN +IAG Q+G F E ++ FR+M +A++ P
Sbjct: 198 VMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPP 257
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
+V+ S++PA + L L LGK +H +RN + + S+L+DMYAKCG+I A +F
Sbjct: 258 NYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVF 317
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+ + ++V+W+ +I G A+HG A D + FE ME+ GV P+ V ++ +L+ACSHAGL++
Sbjct: 318 EGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ +F+ M + G+ P EHY + DLLGRAG L+E+ E I NM P + +W LL A
Sbjct: 378 EGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGA 437
Query: 321 CRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTP 380
C++H NVE+ +VAE + + P++ G+YV LSN YA+ W+ A +R+ M+ ++K P
Sbjct: 438 CKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDP 497
Query: 381 ACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKK 440
CSWIE+ + F+ D SHP +I+ L+E+ + GY P+T +VL +++EE K+
Sbjct: 498 GCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKE 557
Query: 441 NLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRF 500
+ L YHSE++AI FG+I T T +RI KNLR+C DCH++IK ISKI +R+IIVRD RF
Sbjct: 558 SSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRF 617
Query: 501 HHFEDGKCSCGDYW 514
HHF +G CSC DYW
Sbjct: 618 HHFVNGSCSCMDYW 631
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 126/225 (56%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSWN +I G A++G ++EA+ + R+M + P+ TL SVLP + + G
Sbjct: 219 MPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG 278
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H YA+R+ + + +GS+LI+MYAKC +E + ++F LP ++ ++W++IIAG +
Sbjct: 279 KWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMH 338
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G + L F M A + P V++ ++ AC+H ++ G+ ++R +G + +
Sbjct: 339 GRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEH 398
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + + + M + D V W A++ +HGN
Sbjct: 399 YGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGN 443
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 316/521 (60%), Gaps = 23/521 (4%)
Query: 5 DLVSWNTVIVGLARNG------LYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVD 56
++V +NT+I G R + EAL + ++ + ++P FT SSVL A Y++
Sbjct: 277 NVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLE 336
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
GK+IHG I++ + IGS+LI++Y +ED R F P D ++W ++++G
Sbjct: 337 F--GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSG 394
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
CVQN L ++ L F + L A +KP + SS+M ACA L G+Q+ ++GFD
Sbjct: 395 CVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRF 454
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +S + MYA+ G++ A F +M+ HD+VSW+AVI +A HG A DA+ F++M
Sbjct: 455 TVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD 514
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
V PN + F+ VLTACSH GL+D+ Y+ +MTKDYG++P+ +H V DLLGRAG+L
Sbjct: 515 AKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLA 574
Query: 297 EAYEFISN--MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+A FISN HA P +W +LL++CR+H+++E VA +I ++P + +YVIL N
Sbjct: 575 DAEAFISNSIFHADPV--IWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNM 632
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y A A+ R M+ +G+KK P SWIE+K ++FVAGDKSHP I L+E+
Sbjct: 633 YLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Query: 415 LERMEQEGYVPDTKEVLHDVE-EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
L R+E K D E ++++NL+ HSE+LA+ G+I P IR++KNLRV
Sbjct: 693 LSRIE--------KLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRV 744
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCH+ +K ISK REII+RD RFHHF DG CSC DYW
Sbjct: 745 CRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 22/335 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N +I +R GL +L + + + D F+ ++ L + + G
Sbjct: 69 MPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAG 128
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H AI GL + V + +SL++MY+KC + ++ R+F + +D +SWNS+++G V+
Sbjct: 129 RAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRA 188
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCIIRNGFDDNMF 178
G +E ++ F M + + S++ C+ T+ + + +HGC+I+ G D ++F
Sbjct: 189 GAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG----NALHGN--AHDAISLFE 232
+ S+++DMYAK G + A +F + ++V + +I G + G A +A++L+
Sbjct: 249 LVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYS 308
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADL 288
+++ G++P F +VL AC+ AG ++ F I +F+ +A+ DL
Sbjct: 309 EVQSRGMQPTEFTFSSVLRACNLAGYLE-----FGKQIHGQVIKYTFQEDDFIGSALIDL 363
Query: 289 LGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+G +++ + + P ++ W ++S C
Sbjct: 364 YFNSGCMEDGFRCF---RSSPKHDIVTWTAMVSGC 395
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 116/222 (52%), Gaps = 2/222 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D+V+W ++ G +N L+E+AL++ + LKPD FT+SSV+ A G+
Sbjct: 381 PKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGE 440
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I +A + G D +G+S ++MYA+ V+ + R F + D +SW+++I+ Q+G
Sbjct: 441 QIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHG 500
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIA 180
+ L FF +M+ AK+ P ++F ++ AC+H + G + + + ++ G +
Sbjct: 501 CARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHC 560
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
+ ++D+ + G + A H D V W +++ +H
Sbjct: 561 TCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH 602
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 5/254 (1%)
Query: 74 ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
A++ + ++L+ Y + + RL +P ++A+S+N +I + GL L+ +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
A + S+++ + AC+ L G+ +H I +G +F+++SL+ MY+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
AR +FD + D VSW +++ G G + + +F M + G+ NS A +V+ C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 254 SHA--GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
S G +D A + + K G+ +A+ D+ + G L EA ++ P
Sbjct: 221 SGRGDGTMDIAEAVHGCVIK-AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE-PNV 278
Query: 312 NVWLTLLSA-CRVH 324
++ T+++ CR
Sbjct: 279 VMFNTMIAGFCRTE 292
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 9/516 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD----VIKGKE 62
VSWNT+I G ++ G + AL + ++M + P T ++L A + + +G++
Sbjct: 389 VSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRK 448
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGCVQ 119
+H + G + IG++++ MYA C ++++ F + D +SWN+II+ Q
Sbjct: 449 LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ 508
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G L FFR+M + + P ++ +++ ACA L G +H + +G + N+F+
Sbjct: 509 HGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFV 568
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
A++L MY +CG++ AR IF+K+ + D+V + A+I + +G A +A+ LF +M+++G
Sbjct: 569 ATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEG 628
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ +FV+VL+ACSH GL D+ W F SM + YGIAPS +HYA D+LGRAG L +A
Sbjct: 629 SRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADA 688
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I M PT VW TLL ACR +++V+ + +DP + AYV+LSN A A
Sbjct: 689 EELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGA 748
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W +AA +R M ++G++K SWIE+K++ + FVAGD+SHP I L+ L +
Sbjct: 749 GKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEI 808
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPDT+ VL V+E +K+ LL HSERLAI G++ + T+R++KNLRVC DCH
Sbjct: 809 REIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCH 867
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFISKIV +EI+VRD RFHHF DG CSCGDYW
Sbjct: 868 NATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 159/308 (51%), Gaps = 12/308 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN ++ A++G EA + +M + + P TL + + G+ IH
Sbjct: 290 DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLRFGRMIH 346
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A+ GLD ++ +G++L++MY +C E++ LF +P +A+SWN++IAG Q G
Sbjct: 347 ACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMK 405
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACA----HLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L+ F++M + + P ++ +++ A A + G++LH I+ G+ I
Sbjct: 406 RALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG 465
Query: 181 SSLLDMYAKCGNIRLARCIFDK---MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++++ MYA CG I A F + D HD+VSW A+I + HG+ A+ F +M+
Sbjct: 466 TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLH 525
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV PN + VAVL AC+ A + + + + + G+ + A+A + GR G L+
Sbjct: 526 GVAPNQITCVAVLDACAGAAALTEGVIVHDHL-RHSGMESNVFVATALASMYGRCGSLES 584
Query: 298 AYEFISNM 305
A E +
Sbjct: 585 AREIFEKV 592
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 132/254 (51%), Gaps = 4/254 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ V D SW T+I +G + A+ + +M ++ D+ T +VL A D+ +G
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH + + GL+ + + L+++Y C V + LF + +D +SWN+ IA Q+
Sbjct: 148 RSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQS 206
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G D L+ F++M + ++P ++ + CA + + +H + +G + + ++
Sbjct: 207 GDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVS 263
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L YA+ G++ A+ +FD+ D+VSW A++ A HG+ +A LF +M +G+
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 241 PNSVAFVAVLTACS 254
P+ V V T CS
Sbjct: 324 PSKVTLVNASTGCS 337
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IH + GL+ +G+ L+ +Y KC + D +F L V+D SW +II
Sbjct: 47 QGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYT 104
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++G + F +M ++ V+F +++ ACA L L G+ +H I+ +G +
Sbjct: 105 EHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSV 164
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+ LL +Y CG + A +F++M+ D+VSW A I NA G+ A+ LF++M+ +G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEG 223
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+P + V L+ C+ I +A + +S+ ++ G+ + A+A R G L +A
Sbjct: 224 VRPARITLVITLSVCAK---IRQARA-IHSIVRESGLEQTLVVSTALASAYARLGHLDQA 279
Query: 299 YE 300
E
Sbjct: 280 KE 281
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/512 (38%), Positives = 316/512 (61%), Gaps = 5/512 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++WNT+I G A+ G +AL + ++MG + KP+ T +L + D+ +G+ IH
Sbjct: 228 DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG ++++ IG+ L+NMY KC+ +E++ ++F L +D I+WN +I VQ G
Sbjct: 288 RKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQA 347
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L F+QM + + P ++ S+++ ACA L GK +H I ++ + +SL
Sbjct: 348 KDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSL 407
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++MY +CG++ +F + +VSW+ +I A HG++ + F ++ ++G+ +
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V V+ L+ACSH G++ + F SM D+G+AP + H+ + DLL RAG+L+ A I
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYV-ILSNTYAAARRWK 362
+M P W +LLS C++H + + A +VA+K+F ++ + + V +LSN YA A RW
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD 587
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
D R + +K P CS+IE+ + + FVAGDKSHP I +K L ++M+ G
Sbjct: 588 DVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVPD + VLH+V+EE+K+ +L YHSE+LAI +G+I TP GT + I+KNLR C DCH A K
Sbjct: 645 YVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAK 704
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FIS+IV R+I+VRD++RFHHFE+G CSC DYW
Sbjct: 705 FISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 153/261 (58%), Gaps = 4/261 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN---LKPDSFTLSSVLPIFADYVDV 57
M LV+WN +I G +RNG + AL I + M + + +KPD+ T SS L + D+
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G+EI + G ++ + ++LINMY+KC +E + ++F L +D I+WN++I+G
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ G + L+ F++M KP V+F ++ AC +L L G+ +H + +G++ ++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 178 FIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
I + LL+MY KC ++ AR +F+++ D+++W +I+ +G A DA+ +F+QM+
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 237 DGVKPNSVAFVAVLTACSHAG 257
+ V PN + VL+AC+ G
Sbjct: 360 ENVAPNEITLSNVLSACAVLG 380
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 147/253 (58%), Gaps = 4/253 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW ++ ARNG Y EAL R+M L+PD + + + D+ +G+ +H
Sbjct: 24 VSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAM 83
Query: 67 AIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ L+ ++ +G++LI MYA+C +E + + F + K ++WN++IAG +NG
Sbjct: 84 ILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRG 143
Query: 126 GLKFFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
LK ++ M+ +KP ++FSS + AC+ + + G+++ + +G+ + + ++
Sbjct: 144 ALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNA 203
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++MY+KCG++ AR +FD++ D+++W +I G A G A A+ LF++M + KPN
Sbjct: 204 LINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPN 263
Query: 243 SVAFVAVLTACSH 255
V F+ +LTAC++
Sbjct: 264 VVTFIGLLTACTN 276
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY KC V D+ +F + +++SW I+A +NG + E L ++R+M++ ++P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARCIFDKM 203
F + C+ L G+ LH I+ + ++ + ++L+ MYA+C ++ LAR FD+M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQM---EKDGVKPNSVAFVAVLTACSHAGLID 260
+V+W A+I G + +G+ A+ +++ M +G+KP+++ F + L ACS G I
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + T G A A+ ++ + G L+ A + +
Sbjct: 181 QGRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +D+V W+ +I +NG +A++I +M + P+ FTLSS+L A G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ G D +V + ++LI++YAKC +++ + +LF L K+ +SWN++I G
Sbjct: 368 EQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENL 427
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L FR+ L ++ V+FSS + ACA L ++ LG Q+HG I+ + ++
Sbjct: 428 GEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVS 487
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG+I++A+ +F++M+ D+ SW A+I G + HG A+ +F+ M+ K
Sbjct: 488 NSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCK 547
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+ VL+ CS+AGLID+ F SM D+GI P EHY + L GR+G+L +A
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMN 607
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + P+ +W +LSA N E A + AE+I I+P + YV+LSN YA A++
Sbjct: 608 LIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQ 667
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + AS+R M+ KG+KK P SWIE + + F G HP IN L+ L + +
Sbjct: 668 WANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATR 727
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG-TTIRIIKNLRVCGDCHT 479
GYVPD VL D+++E+K L+ HSERLA+ +G++ P I I+KNLR+C DCH+
Sbjct: 728 AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHS 787
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K IS IVQR++++RD +RFHHF G CSC D+W
Sbjct: 788 AMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 172/366 (46%), Gaps = 24/366 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V W ++ NG +E++L ++ +MG P+++T + L K +H
Sbjct: 211 DIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVH 270
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ + + +G L+ +Y + + D+ ++F +P D + W+ +IA QNG +
Sbjct: 271 GQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F +M + P + SSI+ CA LG+QLHG +++ GFD +++++++L+
Sbjct: 331 KAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALI 390
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKC + A +F ++ ++VSW VI+G G A+++F + ++ V V
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEV 450
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA------DLLGRAGKLQEA 298
F + L AC+ ++ + +G+A + VA D+ + G ++ A
Sbjct: 451 TFSSALGACASLASMELG-------VQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVA 503
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI------DPNNMGAYVILS 352
+ M + W L+S H G+ A +IF I PN + +LS
Sbjct: 504 QTVFNEMETIDVAS-WNALISGYSTHG----LGRQALRIFDIMKGSDCKPNGLTFLGVLS 558
Query: 353 NTYAAA 358
A
Sbjct: 559 GCSNAG 564
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 1 MPVSDLVSWNTVIVGLARN---GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + VS+ T+ G A GLY + + G+ L P FT S L +F
Sbjct: 110 MPERNNVSYVTLTQGYACQDPVGLYSR----LHREGH-ELNPHVFT--SFLKLFVSLDKA 162
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+H ++ G D+N +G++LIN Y+ C V+ + +F + KD + W I++
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
V+NG F++ L+ +M + P + +F + + A L H K +HG I++ ++ +
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ LL +Y + G++ A +F++M +D+V W+ +I +G + A+ +F +M +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREG 342
Query: 238 GVKPNSVAFVAVLTACS 254
V PN ++L C+
Sbjct: 343 FVVPNEFTLSSILNGCA 359
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 13/254 (5%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D + K IH ++ G ++ + L+N Y K +D+ LF +P ++ +S+ ++
Sbjct: 64 DSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQ 123
Query: 116 G-CVQN--GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
G Q+ GL+ + R+ ++ P HV F+S + L + LH I++ G
Sbjct: 124 GYACQDPVGLYS---RLHREG--HELNP-HV-FTSFLKLFVSLDKAEICWWLHSPIVKLG 176
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+D N F+ ++L++ Y+ CG++ AR +F+ + DIV W ++ +G D++ L
Sbjct: 177 YDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLS 236
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD-YGIAPSFEHYAAVADLLGR 291
+M DG PN+ F L A G A S + K Y + P + L +
Sbjct: 237 RMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG--VGLLQLYTQ 294
Query: 292 AGKLQEAYEFISNM 305
G + +A++ + M
Sbjct: 295 LGDMSDAFKVFNEM 308
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 314/515 (60%), Gaps = 6/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSW TV+ LA G +EAL + +M + +S+T SSVL V+
Sbjct: 133 MPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGA-CGTPGVLA 191
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+H I+ GLD++V + SSLI+ Y K ++ +F + D + WNSIIAG Q
Sbjct: 192 A--MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQ 249
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G ++ F +M + + +S++ AC + L +G+Q+H +++ +D ++ +
Sbjct: 250 SGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLIL 307
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++LLDMY KCG + A +F +M D++SW+ +I G A +G + +A+ +F+ M+ +G
Sbjct: 308 HNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGP 367
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN++ V VL ACSHAGL++ W YF SM K +GI P EH + DLLGRAGKL EA
Sbjct: 368 TPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAM 427
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI M P +W TLL ACR+HKN LA A +I ++P + GA ++LSN YA R
Sbjct: 428 KFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLR 487
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W +A MR++G+KK P SWIE+ + F+AG+ SHP RI + L L+ R +
Sbjct: 488 QWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAK 547
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T+ VL D+ EQK++LL YHSE+LAI FG + + +G +RI+KNLR+CGDCH
Sbjct: 548 DLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHA 607
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +SK + II+RD RFHHF+ G CSCGDYW
Sbjct: 608 FAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 14/312 (4%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA------IR 69
L +G + AL ++ + ++ D +L ++ + + V G+ IH +
Sbjct: 41 LCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGG 100
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ-NGLFDEGLK 128
++ + +SL++MYAK ++D+ LF +P ++ +SW +++A G E L+
Sbjct: 101 GATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALR 160
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F +M + +FSS++ AC L +H II+ G D ++F+ SSL+D Y
Sbjct: 161 FLVEMRRDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYM 217
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K G++ R +FD+M D+V W ++I G A G+ A+ LF +M++ G N +
Sbjct: 218 KLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTS 277
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL AC+ +++ + K + A+ D+ + G L +A S MH
Sbjct: 278 VLRACTGMVMLEVGRQVHAHVLK---YDRDLILHNALLDMYCKCGCLLDADALFSRMHDR 334
Query: 309 PTENVWLTLLSA 320
+ W T++S
Sbjct: 335 DVIS-WSTMISG 345
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 311/515 (60%), Gaps = 8/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWNT++ GL++NG EEA + R M N + + ++++ A D+
Sbjct: 103 MPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRN----AVSWNAMVAALACSGDMGAA 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++ A + + +++++ Y V+ + F +PV++ +SWN+++AG V+N
Sbjct: 159 EDLFRNAPEK---TDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKN 215
Query: 121 GLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
D+ L+ F+ M+ I +P + SS++ C++L+ L G+Q+H ++ N+ +
Sbjct: 216 SRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTV 275
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY KCG++ A +FD+M DIV+W A+I G A HG AI LFE+M+ +GV
Sbjct: 276 GTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGV 335
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + +AVLTAC H GL D F +M + Y I P +HY+ + DLL RAG L+ A
Sbjct: 336 VPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAV 395
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M P + + TLL+ACRV+KN+E A A K+ DP N GAYV L+N YA A
Sbjct: 396 NMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVAN 455
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W D + +R +M++ + KTP SW+E+K + F + D+ HP I++ L L M+
Sbjct: 456 KWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMK 515
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPD LHDVE+ K +L HSE+LAI FG+I T G T+RI KNLR+CGDCH
Sbjct: 516 AMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHN 575
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI REII+RD +RFHHF G CSCGDYW
Sbjct: 576 AAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 96/178 (53%), Gaps = 10/178 (5%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++L++ + C ++ + R+F +PVKD SWN++++G +NG +E FR M +
Sbjct: 81 NTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNA- 139
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARC 198
VS+++++ A A + + L RN + + + ++++ Y GN++ A
Sbjct: 140 ---VSWNAMVAALACSGDMGAAEDL----FRNAPEKTDAILWTAMVSGYMDTGNVQKAME 192
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSH 255
F M + ++VSW AV+ G + A DA+ +F+ M +D V+PN+ +VL CS+
Sbjct: 193 FFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSN 250
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/484 (42%), Positives = 306/484 (63%), Gaps = 5/484 (1%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR 91
M +KP+ FT S++L + E+H AI+ + +G++L++ Y K
Sbjct: 1 MSREGIKPNDFTYSTILTAQPG----VSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 92 VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA 151
V+++ ++F + KD ++W+++I G Q G + ++ F QM KIKP +FS I+ A
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 152 CAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
CA T + GKQLH I++ F++ + ++S+LL MY+K G+I A +F + D+VS
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W ++I G A HG A+ +FE+M++ ++ + V F+ V++AC+H GL ++ YF+ M
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
KD+ I P EHY+ + DL GRAG L +A E I+ M + NVW TLL+A +H+N+E+
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVG 296
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
A+K+ + P N +YV+L+N YA+ WK+ A +R M K +KK SWIEVKNK
Sbjct: 297 KLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNK 356
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
Y F+AGD SHP ++I L+EL +++ GY PDT V DV+EE K+ +L HSERL
Sbjct: 357 TYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERL 416
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG+I TP GT ++I+KNLRVCGDCH+ IK IS + R+I+VRD++RFHHF+ G CSC
Sbjct: 417 AIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSC 476
Query: 511 GDYW 514
GDYW
Sbjct: 477 GDYW 480
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIKGKEI 63
D+V+W+ +I G A+ G E A+ I QM +KP+ +T S ++ A V +GK++
Sbjct: 71 DIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQL 130
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++I+ + +C+ S+L+ MY+K +E + +F +D +SWNSII+G Q+G
Sbjct: 131 HAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYG 190
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASS 182
+ L+ F +M ++ V+F ++ AC H + G++ ++++ + M S
Sbjct: 191 RKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSC 250
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
++D+Y + G + A I ++M + W ++ + +H N
Sbjct: 251 MVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRN 292
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLVSWN++I G A++G +AL + +M NL+ D T V+ +G+
Sbjct: 173 DLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYF 232
Query: 65 GYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAG-CVQNG 121
++ H ++ + S ++++Y + + + + +P A W +++A C+
Sbjct: 233 DIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRN 292
Query: 122 L 122
L
Sbjct: 293 L 293
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 309/514 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +V+W + G G + EA+++ ++M + ++PDS+ + VL D+ G
Sbjct: 172 IPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSG 231
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I + + N + ++L+N+YAKC ++E + +F + KD ++W+++I G N
Sbjct: 232 EWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASN 291
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
EG++FF QML +KP S + +CA L L LG+ I R+ F N+F+A
Sbjct: 292 SFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + +F +M DIV A I G A +G+ + ++F Q EK G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +L C HAGLI +FN+++ Y + + EHY + DL GRAG L +AY
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P VW LLS CR+ K+ +LA V +++ ++P N G YV LSN Y+ + R
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGR 531
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +AA +R M KGMKK P SWIE++ + F+A DKSHP +I L++L M
Sbjct: 532 WDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VP T+ V DVE+E+K+ +L +HSE+LA+ FG+I T G IR++KNLRVCGDCH
Sbjct: 592 MGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEV 651
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K ISKI +REI+VRDN+RFH F +G CSC DYW
Sbjct: 652 MKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 146/298 (48%), Gaps = 3/298 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G N L+ E L++ + L FT VL + G ++H +
Sbjct: 79 YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVV 138
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + +V +SL+++Y+ R+ D+H++F +P + ++W ++ +G G E +
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAID 198
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F++M+ ++P ++ AC H+ L G+ + + N F+ ++L+++YA
Sbjct: 199 LFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYA 258
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG + AR +FD M DIV+W+ +I G A + + I F QM ++ +KP+ + V
Sbjct: 259 KCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVG 318
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
L++C+ G +D W S+ + + A+ D+ + G + +E M
Sbjct: 319 FLSSCASLGALDLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H I H L + + + L+ + S LF + +N++I G V N
Sbjct: 30 KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
LF E L F + + +F ++ AC + LG LH +++ GF+ ++
Sbjct: 90 HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SLL +Y+ G + A +F+++ +V+WTA+ G G +AI LF++M + GV+
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S V VL+AC H G +D M + SF V +L + GK+++A
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLV-NLYAKCGKMEKARS 268
Query: 301 FISNM 305
+M
Sbjct: 269 VFDSM 273
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 318/494 (64%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
LVSWNT+I RN + EAL+I +M N K FT+SSVL D ++ K++H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+++ +D N+ +G++L+++YAKC ++D+ ++F + K +++W+S++AG VQN ++E
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L +R+ ++ + SS++ AC++L L GKQ+H I ++GF N+F+ASS +D
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG++R + IF ++ ++ W +I G A H + + LFE+M++DG+ PN V
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F ++L+ C H GL+++ +F M YG++P+ HY+ + D+LGRAG L EAYE I ++
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
PT ++W +LL++CRV+KN+ELA AEK+F ++P N G +V+LSN YAA ++W++ A
Sbjct: 419 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 478
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
R +R+ +KK SWI++K+K + F G+ HP I L L+ + + GY P
Sbjct: 479 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 538
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
+ LHDVE +K+ LL HSE+LA+VFG++C P+ + +RI+KNLR+C DCH +K S
Sbjct: 539 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 598
Query: 486 KIVQREIIVRDNSR 499
+R IIVRD +R
Sbjct: 599 MATRRFIIVRDVNR 612
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
+L + A V++ K HG IR L+ +V + + LIN Y+KC VE + ++F + +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN++I +N + E L F +M K + SS++ AC K+LH
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
++ D N+++ ++LLD+YAKCG I+ A +F+ M V+W++++ G + N +
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A+ L+ + ++ ++ N +V+ ACS+ A LI+ +++ G + ++
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG--KQMHAVICKSGFGSNVFVASSA 296
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
D+ + G L+E+Y S + E +W T++S H
Sbjct: 297 VDMYAKCGSLRESYIIFSEVQEKNLE-LWNTIISGFAKH 334
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L WNT+I G A++ +E + + +M + P+ T SS+L + V +G+
Sbjct: 320 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 379
Query: 65 GYA-IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGC 117
+GL NV S ++++ + + +++ L +P S W S++A C
Sbjct: 380 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 434
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/516 (42%), Positives = 315/516 (61%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWNT+I ++ + EAL+++ M +K D + + LP+ A + KG
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKG 423
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII-AGCVQ 119
+ IH + + G+ A+V + +++++MY C +D+ R+F + V+D +SWN++I A Q
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQ 483
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
L E L F+QM + P +SF + + ACA +L GK LH I G + NM +
Sbjct: 484 PRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTV 543
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+++L+MYAK G + LAR +F KM L D++SW +I A HG+A + F +M +G
Sbjct: 544 ANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGK 603
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY-GIAPSFEHYAAVADLLGRAGKLQEA 298
PN V FV+V++ACSH GL+ F S+ D+ I+P EHY + DL+ RAGKL A
Sbjct: 604 LPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAA 663
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FI+ P + T+L A +VHK+VE A K AE + + P+ AYV+LSN Y
Sbjct: 664 EKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEV 723
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+ + A +R M K ++K PA S I VK + + F GD ++ I E L+ L M
Sbjct: 724 GKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEM 783
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GY PDT +LHDV +EQKK LL YHSE+LAI FG+I T GT++RIIKNLRVCGDCH
Sbjct: 784 AKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCH 843
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFISKI REI+VRD+ RFHHF++G CSCGDYW
Sbjct: 844 TATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 213/466 (45%), Gaps = 59/466 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIK 59
MPV D ++W +I + G E+AL++ R M + P + +VL AD + +
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG ++++ + ++L++MY KC+ VED+ ++F + K + WN++I Q
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD---DN 176
++ ++ F ML+ +K ++F ++ AC+ L L + K + C+ D D+
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDS 238
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
F A++L++ Y CG++ A F + L I++ TA+I +A+ LF+ M
Sbjct: 239 SF-ATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLL 296
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+GVK + +A +AVL ACS +++ + ++ A+ ++ G+ G L+
Sbjct: 297 EGVKLDRIACMAVLNACSGPRGLEEG-RIIHGFMREIRFDRHVNAGNALINMYGKCGSLE 355
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKN----------VELAGKVAEKIFMIDP---- 342
EA E +M + W T+++A H ++L G A+KI ++
Sbjct: 356 EAVEVFRSMQHRDVIS-WNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLC 414
Query: 343 ------------------NNMGAYVILSNT----YAAARRWKDAASLRVFMRNKGMKKTP 380
+ + A V+L N Y + + DA+ RVF + MK
Sbjct: 415 ATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDAS--RVF---RAMKVRD 469
Query: 381 ACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
SW A + + P R++ L ++M+ G++PD
Sbjct: 470 QVSW-------NAMITAYAAQP---RLSSEALLLFQQMQLHGFMPD 505
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 162/327 (49%), Gaps = 7/327 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ +I + ++EAL + + M +K D +VL + + +G+ IH
Sbjct: 267 ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIH 326
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ D +V G++LINMY KC +E++ +F + +D ISWN+IIA Q+
Sbjct: 327 GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHP 386
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L M + +K +SF + +P CA L G+ +H I+ +G ++ + +++L
Sbjct: 387 EALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAIL 446
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKDGVKPNS 243
DMY C + A +F M + D VSW A+I A + +A+ LF+QM+ G P+
Sbjct: 447 DMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDV 506
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
++FVA L+AC+ + + + ++ G+ + AV ++ ++G L A +
Sbjct: 507 ISFVAALSACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFG 565
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVE 328
M P +V W ++SA H + +
Sbjct: 566 KM---PLPDVISWNGMISAFAQHGHAD 589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV 104
+ +L + AD + GKE+H + +D +G L+ MY C + D+ F +PV
Sbjct: 2 ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQ 163
+DA++W +I Q G ++ L FR M + + P + +F +++ AC A L G++
Sbjct: 62 QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
+HG + + + +++++LL MY KC ++ AR +FD + +V W A+I A +
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
AI +F M +GVK + F+ VL ACS
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACS 212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++ ++ A +L LGK++H I ++ D F+ L+ MY CG++ A+ FD+M
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ D ++W +I + G++ A+ LF M+ +GV P + FVAVL ACS
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS 110
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/511 (39%), Positives = 309/511 (60%), Gaps = 8/511 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N ++ G N EA+ + RQM + +S TL ++P +++ G +H
Sbjct: 118 VCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 177
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+++G D++V + + I MY KC V + +LF +PVK ISWN++++G QNGL
Sbjct: 178 TLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNV 237
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ +R M + + P V+ ++ +CA+L +G ++ I +GF N F+ ++L++M
Sbjct: 238 LELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINM 297
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN+ A+ +FD M +VSWTA+I G +HG+ A+ LF++M + G++P+ AF
Sbjct: 298 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAF 357
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+ACSHAGL D+ YF M ++Y + P EHY+ + DLLGRAG+L+EA I +M
Sbjct: 358 VCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP 417
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL AC++HKNVELA E++ ++P N+G YV+LSN Y+ A K
Sbjct: 418 IKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLR 477
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R+ M+ K +KK P CS++E+K + + F+ GD++H I L+EL + QE P+
Sbjct: 478 IRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPE 537
Query: 427 TKEVLHDVEEEQKKN---LLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
D EE K+ + HSE+LA+ FG++ T G + IIKNLR+C DCH K
Sbjct: 538 K-----DNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKM 592
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKIV R++ VRD +RFHHF +G CSC DYW
Sbjct: 593 VSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 180/379 (47%), Gaps = 12/379 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT + LA+ + +AL++ QM +P++FT L A I G + HG
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ G + + LI+MY K + V+++ ++F K + +N++++G V N E
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ FRQM + V+ ++PAC L LG LH ++ GFD ++ + + + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG++ A+ +FD+M + ++SW A++ G A +G A + + L+ M+ +GV P+ V
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 247 VAVLTACSHAGLIDKAWSY-FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
V VL++C++ G F + P + A+ ++ R G L +A M
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM 314
Query: 306 HAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYAAARRW 361
P + W ++ +H + E+A ++ +++ I+P+ +LS A
Sbjct: 315 ---PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371
Query: 362 KDAASLRVFMRNKGMKKTP 380
+ ++ RN ++ P
Sbjct: 372 QGLEYFKMMKRNYQLEPGP 390
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV L+SWN ++ G A+NGL L + R M + PD TL VL A+ G
Sbjct: 213 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 272
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ G +N + ++LINMYA+C + + +F +P + +SW +II G +
Sbjct: 273 HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 332
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + ++ F++M+ + I+P +F ++ AC+H G + + RN +
Sbjct: 333 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 392
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S ++D+ + G ++ A+ + + M + D W A++ +H N A FE++ +
Sbjct: 393 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE-- 450
Query: 239 VKPNSVAFVAVLT 251
++P ++ + +L+
Sbjct: 451 LEPENIGYYVLLS 463
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/485 (41%), Positives = 307/485 (63%), Gaps = 2/485 (0%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR 91
M P++ TLS + + VD+ +G++IH G A+ + ++L++ Y KC
Sbjct: 1 MNQEGTAPNNHTLSIAIAACSALVDLSRGRKIHASLEGCGFQADDHVKNTLMDFYTKCDS 60
Query: 92 VEDSHRLF-CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
++D ++F + +SW +I GCVQ G + E FF+ M + I V+++S++
Sbjct: 61 LDDVKKVFRSMGGDAKVVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLD 120
Query: 151 ACAHLTTLHLGKQLHGCIIRNGF-DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC++L +L G++LH I G + ++ + +S+L MY+KCG + AR IFD++ +IV
Sbjct: 121 ACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEKNIV 180
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+W+A+I+ A +G+ A+ LF +ME+ G K + FV+VL ACSHAGL+D A+ YF +M
Sbjct: 181 AWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTM 240
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ + P HY + DLLGRAG+L +A E I M A + +W TLL AC+ H +++L
Sbjct: 241 KSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQRMKAPQSGVLWTTLLGACKTHGDMKL 300
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A + AE+I +DP + YV+LSN Y+ A RW AAS+R M + +KK SW+EV+
Sbjct: 301 AERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAASVRKRMDDMKVKKPAGKSWVEVRG 360
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + FVAGD+SHP I LK LL +++ GY D LH+ EEE+K+ LLYYHSE+
Sbjct: 361 KLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKSATLHNAEEEEKEGLLYYHSEK 420
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+V G++ +P G ++++KNLRVC DCHTA KFISK+ R+I++RD +FHHFE G+CS
Sbjct: 421 LAMVMGLLHSPRGEPVQVVKNLRVCSDCHTAAKFISKVEDRQIVLRDTKQFHHFEHGRCS 480
Query: 510 CGDYW 514
CGDYW
Sbjct: 481 CGDYW 485
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 158/352 (44%), Gaps = 47/352 (13%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+ +VSW +IVG + G Y EA + + M + D+ T +S+L ++ + +G+++
Sbjct: 75 AKVVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGRKL 134
Query: 64 HGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H G L+A+V + +S++ MY+KC R+ ++ +F + K+ ++W++II QNG
Sbjct: 135 HARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQNGD 194
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH----------LTTLHLGKQL------HG 166
LK F +M A K +F S++ AC+H TT+ ++L +G
Sbjct: 195 CSTALKLFWKMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTMKSERKLEPLPGHYG 254
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAH 225
CI+ D+ + G + A + +M V WT ++ HG+
Sbjct: 255 CIV---------------DLLGRAGRLADAEELIQRMKAPQSGVLWTTLLGACKTHGDMK 299
Query: 226 DAISLFEQMEKDGVKPNSVA-FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
A E++ + + P S +V + S AG D A S M P+ + +
Sbjct: 300 LAERAAERIRE--LDPGSATPYVLLSNVYSEAGRWDLAASVRKRMDDMKVKKPAGKSWVE 357
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEK 336
V GKL +EF++ + P + +L R+ ++ AG A+K
Sbjct: 358 V------RGKL---HEFVAGDQSHP--KIGEIVLELKRLLALIKEAGYAADK 398
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/515 (38%), Positives = 322/515 (62%), Gaps = 36/515 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSWN++I G +NG E + +M + L PD T+S++L
Sbjct: 216 MVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNIL------------ 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ Y +C ++++ + F + KD + W +++ GC QN
Sbjct: 264 -----------------------SAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQN 300
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L FR+ML+ ++P + + SS++ +CA L +L G+ +HG + G D ++ ++
Sbjct: 301 GKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVS 360
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY+KCG A +F +M +++SW ++I+G A +G +A++L+E+M + +K
Sbjct: 361 SALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLK 420
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+++ FV VL+AC HAGL+++ YF S++K +G+ P+F+HY+ + +LLGRAG + +A +
Sbjct: 421 PDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVD 480
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLS CR++ +V A +F +DP+N G Y++LSN YAA R
Sbjct: 481 LIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGR 540
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD A++R M+N +KK A SWIE+ N+ + FVA D++H +I E L L++++++
Sbjct: 541 WKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQE 600
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG-TTIRIIKNLRVCGDCHT 479
G+ PDT VLHDV EE+K + + YHSE+LA+ F +I P G T IRI+KN+RVCGDCH
Sbjct: 601 SGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHV 660
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KF+SKI++R II+RD +RFHHF +G+CSC D W
Sbjct: 661 FMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 4/232 (1%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D+F + +L ++A ++ +++ R +V +++++ Y+K VED +F
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRR----DVFSWNAMLSAYSKSGNVEDLRAVF 112
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ V DA+S+N++IAG NG + L+FF +M + + S++ AC+ L +
Sbjct: 113 DQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIK 172
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
GKQ+HG I+ +++F+ ++L +MYAKCG + AR +FD+M ++VSW ++I G
Sbjct: 173 RGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYL 232
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+G LF +M+ G+ P+ V +L+A G ID+A F + +
Sbjct: 233 QNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKE 284
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/517 (40%), Positives = 314/517 (60%), Gaps = 4/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L +WN I ++ +A+ ++ V+ +P+S T + L D V + G
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCVQ 119
+++H + +R G +V + + LI+ Y KC + + +F + K+ +SW S++A VQ
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ 288
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N + F Q +++P SS++ ACA L L LG+ +H ++ +DN+F+
Sbjct: 289 NHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFV 347
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KD 237
S+L+DMY KCG+I A +F ++ ++V+W A+I G A G+ A+ LFE+M
Sbjct: 348 GSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSH 407
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+ V +++L+ CS G +++ F SM +YGI P EH+A V DLLGR+G +
Sbjct: 408 GIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDR 467
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI NM PT +VW LL ACR+H EL AEK+F +D + G +V+LSN A+
Sbjct: 468 AYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLAS 527
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW++A +R M++ G+KK SWI VKN+ + F A D SH I L +L
Sbjct: 528 AGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGG 587
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M++ GYVPDT L D+E+E+K + ++YHSE++A+ FG+I P G IRI KNLR+CGDC
Sbjct: 588 MKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDC 647
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+AIKFIS+IV REIIVRDN RFH F+DG CSC DYW
Sbjct: 648 HSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 183/358 (51%), Gaps = 8/358 (2%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+W ++I G N + AL M N++P+ FT V A + GK+IHG
Sbjct: 73 VVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHG 132
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
A++ G+ +V +G S +MY K D+ +F +P ++ +WN+ I+ VQ+ +
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLD 192
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F++ L +P ++F + + AC + L+LG+QLH I+R G+ +++ +A+ L+D
Sbjct: 193 AIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLID 252
Query: 186 MYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
Y KCG+I A +F+++ + ++VSW +++ + A +F Q K+ V+P
Sbjct: 253 FYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDF 311
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+VL+AC+ G ++ S +++ + + +A+ D+ G+ G ++ A + S
Sbjct: 312 MISSVLSACAELGGLELGRS-VHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSE 370
Query: 305 MHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ P N+ W ++ ++++A ++ E++ + +YV L + + R
Sbjct: 371 L---PERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSR 425
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 15/293 (5%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR-HGLDANVCIGSSLINMYAKCARVE 93
+N+ P + L S+L I G+ IH + IR H + + L+NMY+K +
Sbjct: 1 MNIHPQNL-LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLN 59
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ + L ++ ++W S+I+GCV N F L F M ++P +F + A A
Sbjct: 60 SAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASA 119
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ GKQ+HG ++ G ++F+ S DMY K G A +FD+M ++ +W A
Sbjct: 120 FVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNA 179
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
I + DAI F++ +PNS+ F A L AC +D +
Sbjct: 180 YISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNAC-----VDMVRLNLGRQLHAF 234
Query: 274 GIAPSFEHYAAVA----DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
+ ++ +VA D G+ G + A E + N G +NV W ++L+A
Sbjct: 235 IVRCGYKEDVSVANGLIDFYGKCGDIVSA-EMVFN-RIGNRKNVVSWCSMLAA 285
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +D+V W+ +I +NG EA+++ +M + P+ FTLSS+L A G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ G D ++ + ++LI++YAKC +++ + +LF L K+ +SWN++I G
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + FR+ L ++ V+FSS + ACA L ++ LG Q+HG I+ + ++
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG+I+ A+ +F++M+ D+ SW A+I G + HG A+ + + M+ K
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+ VL+ CS+AGLID+ F SM +D+GI P EHY + LLGR+G+L +A +
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + P+ +W +LSA N E A + AE+I I+P + YV++SN YA A++
Sbjct: 608 LIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQ 667
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + AS+R M+ G+KK P SWIE + + F G HP IN L+ L + +
Sbjct: 668 WANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATR 727
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG-TTIRIIKNLRVCGDCHT 479
GYVPD VL D+++E+K L+ HSERLA+ +G++ P I I+KNLR+C DCH+
Sbjct: 728 AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHS 787
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K IS IVQR++++RD +RFHHF G CSCGD+W
Sbjct: 788 AMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 28/387 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL--PIFADYVDVIKGKE 62
D+V W ++ NG +E++L ++ M P+++T + L I D KG
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG-- 268
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HG ++ + +G L+ +Y + + D+ ++F +P D + W+ +IA QNG
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+E + F +M A + P + SSI+ CA LG+QLHG +++ GFD +++++++
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+D+YAKC + A +F ++ + VSW VI+G G A S+F + ++ V
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA------DLLGRAGKLQ 296
V F + L AC+ +D + +G+A + VA D+ + G ++
Sbjct: 449 EVTFSSALGACASLASMDLG-------VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI------DPNNMGAYVI 350
A + M + W L+S H G+ A +I I PN + +
Sbjct: 502 FAQSVFNEMETIDVAS-WNALISGYSTHG----LGRQALRILDIMKDRDCKPNGLTFLGV 556
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMK 377
LS A + +R+ G++
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIE 583
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 1 MPVSDLVSWNTVIVGLARN---GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + VS+ T+ G A GLY + + G+ L P FT S L +F
Sbjct: 110 MPERNNVSFVTLAQGYACQDPIGLYSR----LHREGH-ELNPHVFT--SFLKLFVSLDKA 162
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+H ++ G D+N +G++LIN Y+ C V+ + +F + KD + W I++
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
V+NG F++ LK M +A P + +F + + A L K +HG I++ + +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ LL +Y + G++ A +F++M +D+V W+ +I +G ++A+ LF +M +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 238 GVKPNSVAFVAVLTACS 254
V PN ++L C+
Sbjct: 343 FVVPNEFTLSSILNGCA 359
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D I K IH ++ G ++ + L+N Y K +D+ LF +P ++ +S+ ++
Sbjct: 64 DPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQ 123
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + R+ ++ P HV F+S + L + LH I++ G+D
Sbjct: 124 GYACQDPIGLYSRLHREG--HELNP-HV-FTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N F+ ++L++ Y+ CG++ AR +F+ + DIV W ++ +G D++ L M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD-YGIAPSFEHYAAVADLLGRAGK 294
G PN+ F L A G D A + K Y + P + L + G
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGD 297
Query: 295 LQEAYEFISNM 305
+ +A++ + M
Sbjct: 298 MSDAFKVFNEM 308
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/549 (38%), Positives = 327/549 (59%), Gaps = 37/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
+P D +SW +++ + L L++ M + L+PD + + ++ A + +
Sbjct: 64 LPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQ 123
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCA----------------------------- 90
GK++H I + + + SSL++MYAKC
Sbjct: 124 GKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQ 183
Query: 91 --RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML---IAKIKPRHVSF 145
R D+ +LF +PVK+ +SW ++I+G VQ+G + + F +M I + P
Sbjct: 184 SGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDP--FIL 241
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SSI+ A A+L L LGKQ+H +I G++ ++F++++L+DMYAKC ++ A+ IF +M
Sbjct: 242 SSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQ 301
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
DIVSWT++I+G A HG A +A+SL+ +M G+KPN V FV ++ ACSH GL+ K +
Sbjct: 302 RDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYF 361
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
FNSM KDYGI PS +HY + DLL R+G L+EA I M P E W LLSAC H+
Sbjct: 362 FNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHR 421
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N + +VA+ + + P + Y++LSN YA+A W+ + +R M +KK P S I
Sbjct: 422 NTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCI 481
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
+ ++ F+AG+ SHP I L+EL M++ GY+PDT VLHD+E+++K+ L++
Sbjct: 482 VLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFW 541
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSERLA+ +G++ G + I+KNLRVCGDCHT +KFIS IV+REI+VRD +R+HHF+D
Sbjct: 542 HSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKD 601
Query: 506 GKCSCGDYW 514
GKCSC ++W
Sbjct: 602 GKCSCNNFW 610
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 6/222 (2%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H + I+ G+D + ++LINMY KC ++D+ LF LP +D ISW SI+ Q
Sbjct: 22 GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81
Query: 120 NGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
L L F M ++P H F+ ++ ACA L + GKQ+H I + D+
Sbjct: 82 ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSL+DMYAKCG + R +FD + + +SWTA+I G A G DAI LF++M
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP--- 198
Query: 239 VKPNSVAFVAVLTACSHAG-LIDKAWSYFNSMTKDYGIAPSF 279
VK N +++ A+++ +G +D + + +K I F
Sbjct: 199 VK-NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPF 239
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ ACA + +GK+LH II+ G D ++++L++MY KCG I+ A +F+++ D
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKA----W 263
+SW +++ N H +S+F M ++DG++P+ F ++ AC+ G + +
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS---- 319
++ S D + S ++ D+ + G L + + + + W ++S
Sbjct: 130 TFIVSPVSDDDVVKS-----SLVDMYAKCG-LPDIGRVVFDSISSKNSISWTAMISGYAQ 183
Query: 320 ACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGM 376
+ R ++L K+ K N+ ++ L + + W D+ L + MR+KG+
Sbjct: 184 SGRKLDAIQLFQKMPVK-------NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGI 233
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 316/510 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ ++N++I G G ++ ++ IVR M + D + +VL A +++ G ++H
Sbjct: 173 DIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVH 232
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ L+ NV +GS+L++MY KC D+H F +LP K+ +SW +++ QN F+
Sbjct: 233 AQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFE 292
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ F + I ++P +++ + +CA L L G L ++ G + + ++L+
Sbjct: 293 DALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALM 352
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY+K G+I A +F M D+VSW +VI+G A HG A +A+ +F M + P+ V
Sbjct: 353 NMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYV 412
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL AC+ GL+D+ Y N M K+ GI P EHY + LL RAG+L EA +FI +
Sbjct: 413 TFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILS 472
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
G W +LLS+C+V+KN L +VAE+I + PN++G YV+LSN YA A RW
Sbjct: 473 NCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGV 532
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R MR +G++K P SWI+V ++ + F + DK+H + ++I LKEL+ +++ GYV
Sbjct: 533 VKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYV 592
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ VLHDVE EQK+ L YHSE++A+ FG+I +P+G TIRI+KNLR+C DCH AIK I
Sbjct: 593 PNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLI 652
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + +R+I+VRD RFH +DG CSC DYW
Sbjct: 653 SVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 158/305 (51%), Gaps = 4/305 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS N ++ G A G + +AL +++ + + + LS+ L A G
Sbjct: 71 MPSRNAVSGNLLMSGYASAGRHSDALALLKA---ADFSLNEYVLSTALSAAAHVRSYGMG 127
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HGYA++ GL + + +++++MY +CA VED+ ++F + D ++NS+I G +
Sbjct: 128 RQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDL 187
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G FD ++ R M+ + HVS+ +++ CA L LG Q+H ++ + N+++
Sbjct: 188 GEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVG 247
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY KC R A F+ + ++VSWTAV+ + DA+ LF +E +GV+
Sbjct: 248 SALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVR 307
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + L +C+ + + S K G + A+ ++ ++G + +A+
Sbjct: 308 PNEFTYAVALNSCAGLAALKNGNALSASAMKT-GHWGALSVCNALMNMYSKSGSIHDAWR 366
Query: 301 FISNM 305
+M
Sbjct: 367 VFLSM 371
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW V+ +N +E+AL + + ++P+ FT + L A + G
Sbjct: 270 LPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNG 329
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ A++ G + + ++L+NMY+K + D+ R+F +P +D +SWNS+I G +
Sbjct: 330 NALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHH 389
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
GL E + F ML+A+I P +V+F ++ ACA L + G +++ G
Sbjct: 390 GLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREH 449
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++ + + G + A + I D+V+W +++ ++ N + EQ+ +
Sbjct: 450 YTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQ-- 507
Query: 239 VKPNSVAFVAVLT 251
+KPN V +L+
Sbjct: 508 LKPNDVGTYVLLS 520
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
++ GK IH IR +V + LI Y KC R+ + ++F +P ++A+S N +++
Sbjct: 26 ELCTGKAIHAQMIR-AAHFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMS 84
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G G + L + A S+ + A AH+ + +G+Q HG +++G +
Sbjct: 85 GYASAGRHSDALALLKA---ADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQE 141
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++ +++L MY +C ++ A +F+ + DI ++ ++I G G +I + M
Sbjct: 142 HPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMV 201
Query: 236 KDGVKPNSVAFVAVLTACS 254
+ + + V++VAVL C+
Sbjct: 202 GEVEQWDHVSYVAVLGHCA 220
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
GK +H +IR D + + L+ Y KCG + LAR +FD M + VS ++ G A
Sbjct: 30 GKAIHAQMIRAAHFD-VIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
G DA++L + + N L+A +H
Sbjct: 89 AGRHSDALALLKAAD---FSLNEYVLSTALSAAAH 120
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/546 (40%), Positives = 304/546 (55%), Gaps = 57/546 (10%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+S WN VI + ALN+ Q+ ++ + D+F SVL GKE
Sbjct: 121 LSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKE 180
Query: 63 IHGYAIRHGLDANVCIG-----------------------------------SSLINMYA 87
IHG+ ++ GLD +V +G ++L++MYA
Sbjct: 181 IHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYA 240
Query: 88 KCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
KC + + +LF L K +SW ++IAGC+++ +EG K F +M I P +
Sbjct: 241 KCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEI---- 296
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
T L+ + CI+ ++L+DMYAKCG+I A +F + D
Sbjct: 297 --------TMLNKERVEVDCILN----------TALVDMYAKCGDINAAGRLFIEAISRD 338
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
I W A+I G A+HG +A+ +F +ME+ GVKPN + F+ +L ACSHAGL+ + F
Sbjct: 339 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 398
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
M +G+ P EHY + DLLGRAG L EA+E I +M P VW L++ACR+HKN
Sbjct: 399 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNP 458
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
+L A ++ I+P N G V++SN YAAA RW DAA +R M+ GMKK P S IEV
Sbjct: 459 QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 518
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
+ F+ GD+SHP RINE L E+ ++ + GYVPDT VL +++EE+K+ L YHS
Sbjct: 519 NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHS 578
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LA+ FG+I T T IRI+KNLRVC DCH A K +SKI R IIVRD +RFHHF +G
Sbjct: 579 EKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGY 638
Query: 508 CSCGDY 513
CSCGDY
Sbjct: 639 CSCGDY 644
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 323/510 (63%), Gaps = 4/510 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ +I G +G Y EA+ + +M + ++ PD++ ++S+L + + +G+E+H A+
Sbjct: 105 YTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRAL 164
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP----VKDAISWNSIIAGCVQNGLFD 124
+ G +N + ++ +Y KC + D+ R+F +P KD + W ++I G V+N +
Sbjct: 165 KLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETN 224
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ FR M ++P + ++ AC+ L L +G+ +H + + + N+F+ ++L+
Sbjct: 225 RALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALI 284
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+MY++CG+I A+ +FD+M D++++ +I G +++G + AI LF M ++P +V
Sbjct: 285 NMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNV 344
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL ACSH GL+D + F+SM +DY + P EHY + DLLGR G+L+EAY+ I
Sbjct: 345 TFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRT 404
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P + TLLSAC++HKN+EL +VA+++ + G YV+LS+ YA++ +WK+A
Sbjct: 405 MKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEA 464
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M+ GM+K P CS IEV N+ + F+ GD HP RI E L+EL + EGY
Sbjct: 465 AQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYH 524
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+ + VL D+E+ +K+ L HSERLAI +G+I T T IR++KNLRVC DCH+AIK I
Sbjct: 525 PEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLI 584
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KI +R+I+VRD +RFH+FE+G CSCGDYW
Sbjct: 585 AKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH IR+G + + L+ +KC ++ + R+F + + ++I G V +G
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ E ++ + +ML I P + +SI+ AC L G+++H ++ GF N +
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 177
Query: 183 LLDMYAKCGNIRLARCIFDKMD----LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++++Y KCG + AR +F++M D V WTA+I G + + A+ F M+ +
Sbjct: 178 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGEN 237
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+PN V VL+ACS G ++ + +S + + I + A+ ++ R G + EA
Sbjct: 238 VRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 296
Query: 299 YEFISNM 305
M
Sbjct: 297 QTVFDEM 303
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 121/235 (51%), Gaps = 6/235 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W +I G RN AL R M N++P+ FT+ VL + + G+ +H
Sbjct: 206 DTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 265
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + ++ N+ +G++LINMY++C ++++ +F + +D I++N++I+G NG
Sbjct: 266 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 325
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSL 183
+ ++ FR M+ +++P +V+F ++ AC+H + G ++ + R+ + + +
Sbjct: 326 QAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCM 385
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEKD 237
+D+ + G + A + M + + +++G L H + L EQ+ K+
Sbjct: 386 VDLLGRVGRLEEAYDLIRTMKM----TPDHIMLGTLLSACKMHKNLELGEQVAKE 436
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 316/521 (60%), Gaps = 12/521 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D+VSWN ++ N ++A+ + ++M L+ D T S+L + DV G+
Sbjct: 312 LRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRV 368
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + L+ NV +G++L++MYAKC ++ +F + + ISW +II+ V+ L
Sbjct: 369 LHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRL 428
Query: 123 FDEGLKFFRQML-------IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
E F+QML ++KP ++F +I+ ACA ++ L GK + G
Sbjct: 429 VAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSS 488
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ + ++++++Y KCG I R IFD + D+ W A+I A G +H+A+ LF +M
Sbjct: 489 DKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM 548
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY-GIAPSFEHYAAVADLLGRAG 293
E +GV+P+S +FV++L ACSH GL D+ SYF SMT +Y + + +H+ VADLLGR G
Sbjct: 549 EMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGG 608
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
+L+EA EF+ + P W +LL+ACR H++++ A +VA K+ ++P YV LSN
Sbjct: 609 RLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSN 668
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YA ++W A +R FM +G+KK S IE+ + F GD +HP I E L +
Sbjct: 669 IYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAK 728
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
L +M++ GYVPDTK VLH V+E++K+ LL+ HSERLAI G+I TP GT +R+ KNLRV
Sbjct: 729 LHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRV 788
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCHTA K ISKI R+I+VRD +RFH F+DGKCSC DYW
Sbjct: 789 CSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 140/256 (54%), Gaps = 8/256 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L SW ++ A +G +E L + +M ++PD+ T + L D + G IH
Sbjct: 109 NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIH 168
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGC-VQNGL 122
+ L+ + + ++L+NMY KC + + R+F + ++ ISW SI+AG +G
Sbjct: 169 QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISW-SIMAGAHALHGN 227
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR ML+ IK + +I+ AC+ + G+ +H CI +GF+ + +A++
Sbjct: 228 VWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANA 287
Query: 183 LLDMYAKCGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ MY +CG + AR +FD MD L D+VSW ++ + DAI L+++M+ ++
Sbjct: 288 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LR 344
Query: 241 PNSVAFVAVLTACSHA 256
+ V +V++L+ACS A
Sbjct: 345 ADKVTYVSLLSACSSA 360
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 155/308 (50%), Gaps = 8/308 (2%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGL-DA 74
L R+ + L++ +Q ++ ++ T + +L A + +G++IH A++H L
Sbjct: 22 LDRSDIASAVLDLEKQA----VRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPG 77
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ +G+ +++MYA C D+ F L ++ SW ++A +G E L+ +M
Sbjct: 78 NLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR 137
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
++P V+F + + +C +L G ++H ++ + + + ++++LL+MY KCG++
Sbjct: 138 QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 195 LARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A+ +F KM+ +++SW+ + +ALHGN +A+ F M G+K A V +L+AC
Sbjct: 198 HAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSAC 257
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
S L+ +S G AV + GR G ++EA + M + V
Sbjct: 258 SSPALVQDG-RLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 314 -WLTLLSA 320
W +LSA
Sbjct: 317 SWNIMLSA 324
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-------GNVNLKPDSFTLSSVLPIFAD 53
M ++SW T+I R L EA ++ +QM + +KPD+ ++L AD
Sbjct: 408 MEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACAD 467
Query: 54 YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISW 110
+ +GK + A GL ++ +G++++N+Y KC +E+ R+F C P D W
Sbjct: 468 VSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRP--DVQLW 525
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
N++IA Q G E LK F +M + ++P SF SI+ AC+H GK +
Sbjct: 526 NAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTT 585
Query: 171 NGFDDNMFIA--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVI 215
+ I + D+ + G ++ A +K+ + D V+WT+++
Sbjct: 586 EYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 324/549 (59%), Gaps = 37/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D VSW +++ + L + L+I M + L+PD F +++L A +
Sbjct: 63 MPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRL 122
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H + + + SSL++MYAKC + +F + VK ++SW ++++G +
Sbjct: 123 GKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYAR 182
Query: 120 NGLFDEGLKFF----------------------------------RQMLIAKIKPRHVSF 145
+GL DE ++ F R+ + + P +
Sbjct: 183 SGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDP--LVL 240
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++ ACA+L L LGKQ+HG +I +G++ +FI+++L+DMYAKC +I AR +F++M
Sbjct: 241 SSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLH 300
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D+VSWT++I+G A HG A +A+ L++QM +KPN V FV ++ ACSHAGL+ K
Sbjct: 301 RDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKL 360
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F +M +DY I+PS + + DLL R+G L EA + I M P E W LLSAC+ H
Sbjct: 361 FKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHG 420
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N E+ ++A+++ ++ + YV+LSN YA A +W+ + +R M + +K+ P S I
Sbjct: 421 NTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSI 480
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
++ ++ F AG+ HP I LKEL M + GY+PDT VLHD+EE++K+ L++
Sbjct: 481 DLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFW 540
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSER A+ +G++ GT IRI+KNLR+CGDCHT +K S IV +EIIVRD +R+HHF+D
Sbjct: 541 HSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKD 600
Query: 506 GKCSCGDYW 514
G+CSC D+W
Sbjct: 601 GRCSCNDFW 609
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+ K+IH ++ GL+ + ++L++ Y KC ++D+H LF +P +D +SW SI+
Sbjct: 19 LNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAY 78
Query: 118 VQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q L ++ L F M +++P H +++++ ACA L +L LGKQ+H + + F D+
Sbjct: 79 NQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDD 138
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ SSL+DMYAKCG +AR +FD + + VSWTA++ G A G +A+ LF
Sbjct: 139 DVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELF 193
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/516 (40%), Positives = 309/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
MP D V+W +I G A+NG E A+ R M L D L SVL D
Sbjct: 180 MPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWL 239
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
+ IH ++ G + V + ++L +MYAK A ++++ R+ + + +S S+I G +
Sbjct: 240 ARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYI 299
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ ++ L F ++ ++P +FSS++ CA L G QLH +I+ + F
Sbjct: 300 ETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSF 359
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++S+LLDMY KCG I L+ +F +++ H ++W A I A HG+ +AI F++M G
Sbjct: 360 VSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSG 419
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++PN + FV++LTACSHAGL+D+ YF SM +GI P EHY+ + D+ GRAG+L EA
Sbjct: 420 IRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEA 479
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FI M P W +LL ACR+ N EL A+ + ++P+N G +V LS YA+
Sbjct: 480 EKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASL 539
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+D ++R MR+ +KK P SW++ K + F + D SHP +I E L+EL ER+
Sbjct: 540 GQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERI 599
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++EGYVPDT+ + ++E+ K+ +L YHSER+A+ F +I P I + KNLR+C DCH
Sbjct: 600 KEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCH 659
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+A+KFISK+ R+IIVRDNSRFHHF G CSCGDYW
Sbjct: 660 SALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 152/296 (51%), Gaps = 5/296 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSW T++ GL +N ++ +AL M L P F LSS A G
Sbjct: 79 MPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAG 138
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +R G DA + + S+L +MY+K + ++ R+F +P KDA++W ++I G +N
Sbjct: 139 AQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKN 198
Query: 121 GLFDEGLKFFRQMLIAKI--KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + + FR M + +HV S++ A L L + +H C++++GF+ +
Sbjct: 199 GNLEAAVIAFRDMRREGLVGADQHV-LCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVA 257
Query: 179 IASSLLDMYAKCGNI-RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L DMYAK ++ AR + ++VS T++I G A+ +F ++ +
Sbjct: 258 VRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQ 317
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
GV+PN F +++ C+ L+++ + K I+ SF + + D+ G+ G
Sbjct: 318 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVS-STLLDMYGKCG 372
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 129/266 (48%), Gaps = 7/266 (2%)
Query: 41 SFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVEDSHRLF 99
S L++ L D+ G+ +H + G A + + + LI MY+ CA V + RLF
Sbjct: 17 SLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLF 76
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+P + +SW ++++G QN + + L F M A + P + SS A A L H
Sbjct: 77 DAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARH 136
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
G QLH +R GFD +F+AS+L DMY+K G + A +FD+M D V+WTA+I G A
Sbjct: 137 AGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYA 196
Query: 220 LHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLIDKAW--SYFNSMTKDYGIA 276
+GN A+ F M ++G V + +VL+A +G + W +S G
Sbjct: 197 KNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA---SGGLKDGWLARAIHSCVMKSGFE 253
Query: 277 PSFEHYAAVADLLGRAGKLQEAYEFI 302
A+ D+ +A + A +
Sbjct: 254 QEVAVRNALTDMYAKAADMDNAARVV 279
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/497 (39%), Positives = 304/497 (61%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL G EE+L M + PD F L SV A DV+ G
Sbjct: 199 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 258
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C +++ + +LP +S N+IIAG QN
Sbjct: 259 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 318
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L++F M + V+F S + +C+ L L G+Q+HG +++ G D + +
Sbjct: 319 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 378
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY++CG + + +F D +A+I HG+ AI LF+QM G +
Sbjct: 379 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 438
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+A+L ACSH+GL ++ F MTK YG+ PS +HY V DLLGR+G L EA
Sbjct: 439 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEA 498
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ KN ++A ++A+++ +DP++ +YV+LSN A +RR
Sbjct: 499 LILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRR 558
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +R MR+ ++K P SW+E+K + F GD+SHP I+E L+E++ ++ Q
Sbjct: 559 WGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQ 618
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLHD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 619 CGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLA 678
Query: 481 IKFISKIVQREIIVRDN 497
IK +S++ REI+VRD+
Sbjct: 679 IKLMSQVTGREIVVRDD 695
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 25 ALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
AL +RQ+ D FT + ++ +AD D+ +E+ R NV +
Sbjct: 122 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWN 177
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
L Y K + + +LF +P ++ +WN+++AG G +E L FF M + P
Sbjct: 178 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 237
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG ++ +
Sbjct: 238 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 297
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ IVS +I G +G++ A+ F M GV + V FV+ +++CS
Sbjct: 298 RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 351
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS + AC L L +QLH +G + F A+ L+ YA G++ AR +F+++
Sbjct: 113 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++SW + G +G+ A LF++M + N + A++ ++ G +++
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPER----NVATWNAMVAGLTNLGFDEESLG 225
Query: 265 YFNSMTK------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+F M + ++G+ F A + D++ G+ AY S +
Sbjct: 226 FFLDMRREGMHPDEFGLGSVFRCCAGLRDVV--TGRQVHAYVVRSGL 270
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/484 (42%), Positives = 304/484 (62%), Gaps = 2/484 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + + M N++PD T+ +V+ A + G
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 242
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y+KC +E + LF LP KD ISWN++I G
Sbjct: 243 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHM 302
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + G +
Sbjct: 303 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASS 362
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ + + SW A+I G A+HG A + +F +M K+G
Sbjct: 363 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNG 422
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F SMT+DY + P EHY + DLLG +G +EA
Sbjct: 423 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 482
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC++H NVEL A+ + I+P N G+YV+LSN YA A
Sbjct: 483 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATA 542
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A+ R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 543 GRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 602
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 603 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 662
Query: 479 TAIK 482
A K
Sbjct: 663 EAYK 666
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 179/334 (53%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+S+T +L A +G++IH
Sbjct: 55 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIH 114
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------------- 96
G+ ++ G D ++ + +SLI+MY + R+ED+H
Sbjct: 115 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIE 174
Query: 97 ---RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++F +PVKD +SWN++I+G + G + E L+ F+ M+ ++P + +++ ACA
Sbjct: 175 NAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 234
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D+Y+KCG + A +F+ + D++SW
Sbjct: 235 QSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNT 294
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTK 271
+I G H N + +A+ LF++M + G PN V +++L AC+H G ID W + +
Sbjct: 295 LI-GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 353
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+A + ++ D+ + G ++ A++ +++
Sbjct: 354 LKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI 387
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLD---MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+ +H +I+ G + + S L++ + + A +F+ + +++ W + G+
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
AL + A+ L+ M G+ PNS F +L +C+ + + + K G
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLK-LGCDLD 125
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEK 336
+ ++ + + G+L++A++ P +V + L+ +E A K+ ++
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDE---SPHRDVVSYTALIKGYASRGYIENAQKMFDE 182
Query: 337 IFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
I + D + A + + YA +K+A L
Sbjct: 183 IPVKDVVSWNAMI---SGYAETGNYKEALEL 210
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 311/522 (59%), Gaps = 9/522 (1%)
Query: 2 PVSDLVSWNTVIVGLAR-----NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
P + WNT+I + G ++I +M ++PD T +L FA
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ G+ +H +R GL + + +SLI+MY+ V+ + LF ++P ++ ISW+ +I G
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMING 139
Query: 117 CVQNGLFDEGLKFFRQML---IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
V+ G + E L FR+M + ++P + S ++ AC L L GK H I + G
Sbjct: 140 YVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGM 199
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFE 232
++ + ++L+DMYAKCG++ A +F + + D+++W+A+I G A+HG A + + LF
Sbjct: 200 PVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFS 259
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M GV+PN+V F+AV AC H GL+ + Y MT+DY I P+ +HY + DL GRA
Sbjct: 260 KMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRA 319
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G+++EA+ + +M P VW LLS R+H ++E +K+ ++P N GAYV+LS
Sbjct: 320 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLS 379
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA RW+D +R M G+KK P CS IEV + F GD SHP +I+ L+
Sbjct: 380 NVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLE 439
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
E+LER++ EGYV +TKEVL D++EE K+ L HSE+LA+ +G + T GT IRI+KNLR
Sbjct: 440 EILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLR 499
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+C DCH AIK ISK+ REIIVRD +RFHHF G CSC DYW
Sbjct: 500 ICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP +++SW+ +I G R G Y+EAL + R+M G +++P+ FT+S VL +
Sbjct: 125 MPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGAL 184
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC-LLPVKDAISWNSIIAG 116
GK H Y + G+ +V +G++LI+MYAKC VE + +F L P KD ++W+++I+G
Sbjct: 185 EHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISG 244
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+GL +E + F +M+ ++P V+F ++ AC H + GK +R +D
Sbjct: 245 LAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDY----LRRMTEDY 300
Query: 177 MFIAS-----SLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
I + ++D+Y + G I+ A + M + D++ W A++ G+ +HG+
Sbjct: 301 SIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGD 353
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/514 (40%), Positives = 317/514 (61%), Gaps = 5/514 (0%)
Query: 5 DLVSWNTVIVGLA-RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D VSWN++I LA EA+ M P+ T ++L + GK+I
Sbjct: 555 DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI 614
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCVQNGL 122
H ++ + A+ I ++L+ Y KC + +F + +D +SWNS+I+G + N L
Sbjct: 615 HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNEL 674
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + M+ + +F++++ ACA + TL G ++HGC +R + ++ I S+
Sbjct: 675 LPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSA 734
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMYAKCG I A F+ M ++ SW ++I G A HG+ ++ LF QM+ G P+
Sbjct: 735 LVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPD 794
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V FV VL+ACSHAGL+++ +S+F+SM++ YG+AP EH++ + DLLGR G+L + +F+
Sbjct: 795 HVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFL 854
Query: 303 SNMHAGPTENVWLTLLSA-CRVH-KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ M P +W T+L A CR + +N L + AE + ++P N Y++LSN YA+ +
Sbjct: 855 NQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGK 914
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D A RV MR +KK CSW+ +K+ + FVAGDKSHP I E LKEL +M
Sbjct: 915 WDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRL 974
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+P+T+ L+D+E E K+ LL YHSE++A+ F ++ P IRI+KNLRVCGDCH+A
Sbjct: 975 AGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSA 1033
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS+IV+R+I++RD++RFHHFE+GKCSCGD+W
Sbjct: 1034 FKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 173/328 (52%), Gaps = 12/328 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVI- 58
M ++VS N +I+GL R EEA+ + +M + V L P+S+ + +L F ++ V+
Sbjct: 345 MSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPEF-HVLE 401
Query: 59 ----KGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
KG E+H + IR GL +A + IG+ LINMYAKC + D+ +F L+ KD+++WNS+
Sbjct: 402 NGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSM 461
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
I G QN F E +K F++M ++ P + + S + +CA L + +G+QLH ++ G
Sbjct: 462 ITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGL 521
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA-LHGNAHDAISLFE 232
D ++ ++++LL +Y +CG ++ + F M +D VSW ++I A + +A+ F
Sbjct: 522 DLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFL 581
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
M + G PN V F+ +L A S L + +++ +A A+ G+
Sbjct: 582 VMMRAGWDPNRVTFITILAAVSSLSLHELG-KQIHALVLKRNVAADTAIENALLACYGKC 640
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSA 320
G + S M E W +++S
Sbjct: 641 GDMGYCENIFSRMSDRQDEVSWNSMISG 668
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 136/261 (52%), Gaps = 10/261 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD--VI 58
MP+ +LVSW+ +I G RN + EA + R+M + P+ + SV+ + + +
Sbjct: 134 MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLK 193
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G +IHG + +V + LI+MY V+ + R F + ++ +S NS+I+
Sbjct: 194 FGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVY 253
Query: 118 VQNG----LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCIIRN 171
Q G FD ++++ +KP +F S++ A L + L L +QL + ++
Sbjct: 254 CQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKS 313
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
GF ++++ S+L+ +AK G+I A+ IF KM ++VS +I+G +A+ LF
Sbjct: 314 GFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELF 373
Query: 232 EQMEKDGVKPNSVAFVAVLTA 252
+M KD V+ N +++ +LTA
Sbjct: 374 MEM-KDSVELNPNSYMIILTA 393
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 116/209 (55%), Gaps = 10/209 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+H ++G ++ + ++LIN+YA+ + ++F +P+++ +SW+ +I+G +N
Sbjct: 93 EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT--LHLGKQLHGCIIRNGFDDNMF 178
+ +E + FR+M+ P H +F S++ AC L G Q+HG + + + +++
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT 212
Query: 179 IASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK- 236
++ L+ MY G + AR FD + ++VS ++I G+A A +F M+K
Sbjct: 213 ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272
Query: 237 ---DGVKPNSVAFVAVLTA-CS--HAGLI 259
DG+KPN F ++++A CS ++GL+
Sbjct: 273 VMGDGLKPNEYTFGSLISATCSLANSGLV 301
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L SWN++I G AR+G ++L++ QM PD T VL + V +G
Sbjct: 755 MPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEG 814
Query: 61 -------KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNS 112
EI+G A R ++ C ++++ + + +PVK + + W +
Sbjct: 815 FSHFDSMSEIYGLAPR--MEHFSC----MVDLLGRVGELNKMEDFLNQMPVKPNVLIWRT 868
Query: 113 IIAGCVQ 119
++ C +
Sbjct: 869 VLGACCR 875
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 315/521 (60%), Gaps = 23/521 (4%)
Query: 5 DLVSWNTVIVGLARNG------LYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVD 56
++V +NT+I G R + EAL + ++ + ++P FT SSVL A Y++
Sbjct: 277 NVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLE 336
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
GK+IHG I++ + IGS+LI++Y +ED R F P D ++W ++++G
Sbjct: 337 F--GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSG 394
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
CVQN L ++ L F + L A +KP + SS+M ACA L G+Q+ ++GFD
Sbjct: 395 CVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRF 454
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ +S + MYA+ G++ A F +M+ HD+VSW+AVI +A HG A DA+ F++M
Sbjct: 455 TVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD 514
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
V PN + F+ VLTACSH GL+D+ Y+ +M KDYG++P+ +H V DLLGRAG+L
Sbjct: 515 AKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLA 574
Query: 297 EAYEFISN--MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+A FISN HA P +W +LL++CR+H+++E VA +I ++P + +YVIL N
Sbjct: 575 DAEAFISNGIFHADPV--IWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNM 632
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y A A+ R M+ +G+KK P SWIE+K ++FVAGDKSHP I L+E+
Sbjct: 633 YLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Query: 415 LERMEQEGYVPDTKEVLHDVE-EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
L R+E K D E ++++NL+ HSE+LA+ G+I P IR++KNLRV
Sbjct: 693 LSRIE--------KLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRV 744
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCH+ +K ISK REII+RD RFHHF DG CSC DYW
Sbjct: 745 CRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 22/335 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N +I +R GL +L + + + D F+ ++ L + + G
Sbjct: 69 MPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAG 128
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H AI GL + V + +SL++MY+KC + ++ R+F + +D +SWNS+++G V+
Sbjct: 129 RAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRA 188
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCIIRNGFDDNMF 178
G +E ++ F M + + S++ C+ T+ + + +HGC+I+ G D ++F
Sbjct: 189 GAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG----NALHGN--AHDAISLFE 232
+ S+++DMYAK G + A +F + ++V + +I G + G A +A++L+
Sbjct: 249 LVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYS 308
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADL 288
+++ G++P F +VL AC+ AG ++ F I +F+ +A+ DL
Sbjct: 309 EVQSRGMQPTEFTFSSVLRACNLAGYLE-----FGKQIHGQVIKYTFQEDDFIGSALIDL 363
Query: 289 LGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+G +++ + + P ++ W ++S C
Sbjct: 364 YFNSGCMEDGFRCF---RSSPKHDIVTWTAMVSGC 395
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 116/222 (52%), Gaps = 2/222 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D+V+W ++ G +N L+E+AL++ + LKPD FT+SSV+ A G+
Sbjct: 381 PKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGE 440
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I +A + G D +G+S ++MYA+ V+ + R F + D +SW+++I+ Q+G
Sbjct: 441 QIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHG 500
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIA 180
+ L FF +M+ AK+ P ++F ++ AC+H + G + + + ++ G +
Sbjct: 501 CARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHC 560
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
+ ++D+ + G + A H D V W +++ +H
Sbjct: 561 TCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIH 602
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 5/254 (1%)
Query: 74 ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
A++ + ++L+ Y + + RL +P ++A+S+N +I + GL L+ +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
A + S+++ + AC+ L G+ +H I +G +F+++SL+ MY+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
AR +FD + D VSW +++ G G + + +F M + G+ NS A +V+ C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 254 SHA--GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
S G +D A + + K G+ +A+ D+ + G L EA ++ P
Sbjct: 221 SGRGDGTMDIAEAVHGCVIK-AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE-PNV 278
Query: 312 NVWLTLLSA-CRVH 324
++ T+++ CR
Sbjct: 279 VMFNTMIAGFCRTE 292
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 322/555 (58%), Gaps = 55/555 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN-IVRQMGNVNLKPDSFTLSSVLPIFA-DYVDVI 58
P D +NT+I L+ + +L ++ + + L PDSF+ + L A D
Sbjct: 71 FPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKR 130
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF------------------- 99
+G ++H +A RHG D ++ +G++LI+MYA+C E + ++F
Sbjct: 131 QGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACF 190
Query: 100 -------------------CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
C + ++D SW+++I G ++G F + FF+++L + +P
Sbjct: 191 RCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRP 250
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
VS + ++ ACA GK LHG + + GF + + ++L+D Y+KCGN+ +A+ +F
Sbjct: 251 SEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVF 310
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+ + A+HG A +AI +F +ME+ GV+P+ V F+++L ACSH+GL++
Sbjct: 311 N--------------ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVE 356
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ + F+ M YGI P+ EHY + DL GRA +LQ+AYEFI M P +W TLL A
Sbjct: 357 QGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGA 416
Query: 321 CRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTP 380
C +H N+ELA V ++ +DPNN G +V+LSN YA A +WKD A +R M + MKK P
Sbjct: 417 CSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIP 476
Query: 381 ACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM-EQEGYVPDTKEVLHDVEEEQK 439
S IE+ Y FVAG+K + ++ L+E++ R+ E+EGY P + VLHDVEEE+K
Sbjct: 477 GWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEEEEK 536
Query: 440 KNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSR 499
++ + HSE+LA FGI P G +RI+KNLRVCGDCHT +K ISK+ Q EIIVRD SR
Sbjct: 537 EDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSR 596
Query: 500 FHHFEDGKCSCGDYW 514
FH F+ G CSC DYW
Sbjct: 597 FHSFKGGFCSCRDYW 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 63/332 (18%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACA 153
S RLF P D +N++I + L+ F Q+L + P SF+ + A
Sbjct: 64 SLRLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIA 123
Query: 154 H-LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ + G QLH R+GFDD++F+ ++L+ MYA+CG AR +FD+M ++V+W
Sbjct: 124 NDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWN 183
Query: 213 AV--------------------------------------IMGNALHGNAHDAISLFEQM 234
AV I+G A G+ HDA F+++
Sbjct: 184 AVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKEL 243
Query: 235 EKDGVKPNSVAFVAVLTACSHA----------GLIDKAW-----SYFNSMTKDYGIAPSF 279
+D +P+ V+ VL+AC+ A G ++KA S N++ Y +
Sbjct: 244 LRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNV 303
Query: 280 EHYAAVADL-LGRAGKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKVAE 335
+ V ++ L G+ EA M P +++LL AC VE +
Sbjct: 304 DMAKLVFNISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFS 363
Query: 336 KI---FMIDPNNMGAYVILSNTYAAARRWKDA 364
K+ + I+P + Y + + Y A R + A
Sbjct: 364 KMRNFYGIEP-AIEHYGCMVDLYGRAARLQKA 394
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/516 (42%), Positives = 315/516 (61%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWNT+I ++ + EAL+++ M +K D + + LP+ A + KG
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKG 423
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII-AGCVQ 119
+ IH + + G+ A+V + +++++MY C +D+ R+F + +D +SWN++I A Q
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQ 483
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
L E L F+QM + P +SF + + ACA +L GK LH I G + NM +
Sbjct: 484 PRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTV 543
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+++L+MYAK G++ LAR +F KM L D++SW +I A HG+A + F +M +G
Sbjct: 544 ANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGK 603
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY-GIAPSFEHYAAVADLLGRAGKLQEA 298
PN V FV+V++ACSH GL+ F S+ D+ I+P EHY + DL+ RAGKL A
Sbjct: 604 LPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAA 663
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FI+ P + T+L A +VHK+VE A K AE + + P+ AYV+LSN Y
Sbjct: 664 EKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEV 723
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+ + A +R M K ++K PA S I VK + + F GD ++ I E L+ L M
Sbjct: 724 GKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEM 783
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GY PDT +LHDV +EQKK LL YHSE+LAI FG+I T GT++RIIKNLRVCGDCH
Sbjct: 784 AKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCH 843
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFISKI REI+VRD+ RFHHF++G CSCGDYW
Sbjct: 844 TATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 213/466 (45%), Gaps = 59/466 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIK 59
MPV D ++W +I + G E+AL++ R M + P + +VL AD + +
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG ++++ + ++L++MY KC+ VED+ ++F + K + WN++I Q
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD---DN 176
++ ++ F ML+ +K ++F ++ AC+ L L + K + C+ D D+
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDS 238
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
F A++L++ Y CG++ A F + L I++ TA+I +A+ LF+ M
Sbjct: 239 SF-ATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLL 296
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+GVK + +A +AVL ACS +++ + ++ A+ ++ G+ G L+
Sbjct: 297 EGVKLDRIACMAVLNACSGPRGLEEG-RMIHGFMREIRFDRHVNAGNALINMYGKCGSLE 355
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKN----------VELAGKVAEKIFMIDP---- 342
EA E +M + W T+++A H ++L G A+KI ++
Sbjct: 356 EAVEVFRSMQHRDVIS-WNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLC 414
Query: 343 ------------------NNMGAYVILSNT----YAAARRWKDAASLRVFMRNKGMKKTP 380
+ + A V+L N Y + + DA+ RVF + MK
Sbjct: 415 AASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDAS--RVF---RAMKARD 469
Query: 381 ACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
SW A + + P R++ L ++M+ G++PD
Sbjct: 470 QVSW-------NAMITAYAAQP---RLSSEALLLFQQMQLHGFMPD 505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 161/327 (49%), Gaps = 7/327 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ +I + ++EAL + + M +K D +VL + + +G+ IH
Sbjct: 267 ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIH 326
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ D +V G++LINMY KC +E++ +F + +D ISWN+IIA Q+
Sbjct: 327 GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHP 386
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L M + +K +SF + +P CA L G+ +H I+ +G ++ + +++L
Sbjct: 387 EALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAIL 446
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKDGVKPNS 243
DMY C + A +F M D VSW A+I A + +A+ LF+QM+ G P+
Sbjct: 447 DMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDV 506
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
++FVA L+AC+ + + + ++ G+ + AV ++ ++G L A +
Sbjct: 507 ISFVAALSACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFG 565
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVE 328
M P +V W ++SA H + +
Sbjct: 566 KM---PLPDVISWNGMISAFAQHGHAD 589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV 104
+ +L + AD + GKE+H + +D +G L+ MY C + D+ F +PV
Sbjct: 2 ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61
Query: 105 KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQ 163
+DA++W +I Q G ++ L FR M + + P + +F +++ AC A L G++
Sbjct: 62 QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
+HG + + + +++++LL MY KC ++ AR +FD + +V W A+I A +
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
AI +F M +GVK + F+ VL ACS
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACS 212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++ ++ A +L LGK++H I ++ D F+ L+ MY CG++ A+ FD+M
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ D ++W +I + G++ A+ LF M+ +GV P + FVAVL ACS
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS 110
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/507 (40%), Positives = 310/507 (61%), Gaps = 1/507 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G E AL + +M ++ D+FT ++ A + +G +IHGY
Sbjct: 53 FNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIF 112
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+ ++ + +SLINMY KC ++E S +F + +D SW++IIA G++ E L
Sbjct: 113 KRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLS 172
Query: 129 FFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F +M +P S++ AC HL L LG+ H ++RN + N+ + +SL+DMY
Sbjct: 173 VFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMY 232
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG I +F +M + +S++ +I G A+HG +A+ +F M ++G+KP+ V ++
Sbjct: 233 VKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYL 292
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
VL+AC+HAGL+D+ FN M ++GI P+ +HY + L+GRAG L +A E I +M
Sbjct: 293 GVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPI 352
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P E VW LLSAC+ H N+E+ A+ + ++ +N G YV+LSN YA A+RW+D A +
Sbjct: 353 KPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKI 412
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M KG +TP S ++V+ K Y FV+ D SHP + E + ++ +++ EGY PDT
Sbjct: 413 RTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDT 472
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
+VL DV+EE+K+ L HS++LA+ F +I T G IRI +NLR+C DCHT K IS I
Sbjct: 473 SQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVI 532
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
QREI VRD +RFHHF+DG CSC DYW
Sbjct: 533 YQREITVRDRNRFHHFKDGTCSCRDYW 559
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 307/542 (56%), Gaps = 37/542 (6%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV----IKGKEIHG 65
+ +I L+R+ AL + + L P TL S+L A V + +H
Sbjct: 41 DALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHT 100
Query: 66 YAIRHGLDANVCIGSSLINM--------------------------------YAKCARVE 93
+A++ GLD V + ++LI + YA+ R+
Sbjct: 101 HAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLA 160
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
D+ LF +P ++A+SW++++ G VQ G E L+ F +M ++P ++ ACA
Sbjct: 161 DARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACA 220
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L GK +HG + +G N+F ++L+DMY+KCG ++LA +F++M ++++WT
Sbjct: 221 QHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTT 280
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A+HG +A+ LF QME G++P+ +AF+ VL AC+HAGL+DK F+SM + Y
Sbjct: 281 MIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKY 340
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P EHY + DLL R G L EA E I M P +W L++ CR HKNVE A V
Sbjct: 341 GIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYV 400
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+ +++P+ GAYV+LSN YAA+ R A +R MR KG+ KTP CS +EV +
Sbjct: 401 AKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQ 460
Query: 394 FVAGDKSHPFYHRINEALKELLERME-QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F+ GD SHP I E+ R+ +EGY+PD KEVL D+EEE+K+ L HSE+LAI
Sbjct: 461 FIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAI 520
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
F +I D IRI KNLRVC DCH K ISK+ REI+VRD +RFH F++G CSC D
Sbjct: 521 AFALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKD 580
Query: 513 YW 514
YW
Sbjct: 581 YW 582
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 119/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW+ ++ G + G EAL I +M +++PD L VL A + + +G
Sbjct: 169 MPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGY HG+ N+ G++L++MY+KC V+ + +F + K+ ++W ++I G +
Sbjct: 229 KWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMH 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F QM + I+P ++F ++ AC H + G++L ++R G +
Sbjct: 289 GRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEH 348
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ A+ G + A+ + KM + D + W A++ G H N
Sbjct: 349 YGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKN 393
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/575 (36%), Positives = 321/575 (55%), Gaps = 62/575 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN VI G N +A+ +M ++ +P+ FT ++ + V +G
Sbjct: 93 IPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEG 151
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR----------------------- 97
++IHG+ ++HG+ ++V I S+ I MYA R+ED+ +
Sbjct: 152 RQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCG 211
Query: 98 -------LFCLLPVK-------------------------------DAISWNSIIAGCVQ 119
LF +PVK D ISW+S++ G +
Sbjct: 212 VLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYIS 271
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G + E L+ F+QM + +P SS++ AC+++ + G+ +H + RN + +
Sbjct: 272 AGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVL 331
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++LLDMYAKCG + + +F++M +I +W A+I G A+HG A DA+ LF ++++ +
Sbjct: 332 GTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRM 391
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + V VLTAC+HAG +DK F +M + YG+ P EHY + DLLGR+G EA
Sbjct: 392 KPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAE 451
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I++M P VW LL ACR+H N +LA +V + + ++P N G YV+LSN YA
Sbjct: 452 DLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVG 511
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+ D + +R M+N+G+K P S +++ + F GD SHP I LK + ER++
Sbjct: 512 RFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQ 571
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
G+ PDT +VL D++EE+K+ + YHSE+LAI FG+I T G I I+KNLRVC DCH+
Sbjct: 572 MAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHS 631
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS+I REIIVRD R+HHF++G CSC D+W
Sbjct: 632 ATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 141/339 (41%), Gaps = 66/339 (19%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAK--CARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++H +R G + + +L+ YA + + + ++F +P + WN +I GC++
Sbjct: 51 QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N + + F+ +M+I +P ++ ++ AC+ + G+Q+HG ++++G ++ I
Sbjct: 111 NNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169
Query: 180 ASSLLDMYA------------------------------KCGNIRLARCIFDKMDLHDIV 209
S+ + MYA KCG + A+ +F +M + +I
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG 229
Query: 210 SWTAVIMGNALHGNAHD-------------------------------AISLFEQMEKDG 238
SW +I G A GN D A+ +F+QM+++
Sbjct: 230 SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE 289
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P +VL ACS+ G ID+ + ++ K I A+ D+ + G+L
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQG-RWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMG 348
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+E M W ++ +H E A ++ K+
Sbjct: 349 WEVFEEMKEREI-FTWNAMIGGLAIHGRAEDALELFSKL 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 19/220 (8%)
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK--CGNIRLARCIFDKMDLHDIVSWT 212
+T+L QLH ++R+G + +++ +LL YA N A +F + ++ W
Sbjct: 43 ITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWN 102
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
VI G + AI + +M D +PN + + ACS A + + + K
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK- 160
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLTLLSA---CRVHKNVE 328
+GI +A + G+L++A + ++G ++ V W T++ C V
Sbjct: 161 HGIGSDVHIKSAGIQMYASFGRLEDARKM---FYSGESDVVCWNTMIDGYLKCGVL---- 213
Query: 329 LAGKVAEKIFMIDP-NNMGAYVILSNTYAAARRWKDAASL 367
+ A+ +F P N+G++ ++ N A DA L
Sbjct: 214 ---EAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKL 250
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/480 (41%), Positives = 302/480 (62%), Gaps = 4/480 (0%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC----ARVED 94
P+ FT VL A ++ GK +HG ++ G V + ++L++MY C +E
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ ++F + D++SW+++I G V+ G + + FR+M I + P ++ S++ AC
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L L LGK + + + N+ ++++L+DM+AKCG++ A +F M +IVSWT+V
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I G A+HG +A+++FE+M + GV P+ V F+ +L+ACSH+GL+DK YF+SM KD+
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFS 247
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
I P EHY + D+L RAG ++EA +F+ M P VW TL++ACR H ++L K+
Sbjct: 248 IVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKIT 307
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
++ +P + YV+LSN YA W+ +R M KGMKK P + IE+ N+ Y F
Sbjct: 308 RQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEF 367
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
VAGDKSH I E + E+ + M++ GY+P T EVL D+++E K++ L HSE+LAI F
Sbjct: 368 VAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAF 427
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ TP GT IRI+KNLRVC DCH+A KFISKI REI+VRD +RFHHF++G CSC D+W
Sbjct: 428 ALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 10/198 (5%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-- 190
ML K P ++ ++ ACA + L+LGK +HG +++ GF D + + ++L+ MY C
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 191 --GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
G I AR +FD+M D VSW+A+I G G + DAI+LF +M+ GV P+ + V+
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
VL+AC+ G ++ + S + + + E A+ D+ + G + +A +M
Sbjct: 121 VLSACTGLGALELG-KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRE- 178
Query: 309 PTENV--WLTLLSACRVH 324
N+ W +++ +H
Sbjct: 179 --RNIVSWTSVIGGLAMH 194
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M SD VSW+ +I G R G +A+N+ R+M + PD T+ SVL + G
Sbjct: 75 MYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELG 134
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + Y + + NV + ++LI+M+AKC V+ + LF + ++ +SW S+I G +
Sbjct: 135 KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMH 194
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F +M+ + + P V F ++ AC+H + GK+ +R F I
Sbjct: 195 GRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDS-MRKDFSIVPKIE 253
Query: 181 --SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHG 222
++DM + G ++ A +M + + V W +I HG
Sbjct: 254 HYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/518 (40%), Positives = 311/518 (60%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
M D VSWNTVI LA +G EA+ + +M P+ T ++L +
Sbjct: 265 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 324
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
+IH +++ + + I ++L+ Y K +E+ +F + + D +SWNS+I+G +
Sbjct: 325 SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYI 384
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
N L + + M+ + +F++++ ACA + TL G ++H C IR + ++
Sbjct: 385 HNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVV 444
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I S+L+DMY+KCG I A F+ M + ++ SW ++I G A HG+ +A+ LF +M+ G
Sbjct: 445 IGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSG 504
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ + FV VL+ACSH GL+D+ + YF SMT+ YG+ P EHY+ + DLLGRAG+L +
Sbjct: 505 QLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKI 564
Query: 299 YEFISNMHAGPTENVWLTLLSAC--RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
FI+ M P +W T+L AC + EL + AE +F +DP N YV+LSN YA
Sbjct: 565 ENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYA 624
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ +W+D A R MR +KK CSW+ +K+ + FVAGD SHP I LKEL +
Sbjct: 625 SGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDK 684
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ GYVP K L+D+E E K+ LL YHSE+LA+ F ++ G IRI+KNLRVCGD
Sbjct: 685 KIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGD 743
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K+ISK+V R I++RD++RFHHFEDGKCSC DYW
Sbjct: 744 CHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 172/325 (52%), Gaps = 8/325 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD-YVDVIK 59
MP + V+W +I G +NG+ E+A ++++M P+ F S + + + K
Sbjct: 61 MPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRK 120
Query: 60 GKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+++HGYAIR GL DA V +G+ LINMYAKC ++ + +F L+ KD++SWNS+I G
Sbjct: 121 GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLD 180
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QN F++ +K + M + P + + S + +CA L + LG+Q HG I+ G D ++
Sbjct: 181 QNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS 240
Query: 179 IASSLLDMYAKCGNIRLARC--IFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQME 235
++++LL +YA+ RLA C +F M D VSW VI A G + +AI +F +M
Sbjct: 241 VSNTLLALYAETS--RLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMM 298
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ G PN V F+ +L S K +++ Y + A+ G++G++
Sbjct: 299 RAGWSPNRVTFINLLATVSSLS-TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEM 357
Query: 296 QEAYEFISNMHAGPTENVWLTLLSA 320
+ E S M E W +++S
Sbjct: 358 ENCEEIFSRMSERRDEVSWNSMISG 382
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H ++HG D+++ + ++LIN+Y + + +LF +P ++ ++W +I+G QNG+
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH-LTTLHLGKQLHGCIIRNGFDD-NMFIA 180
++ ++M+ P +F S + AC + G+Q+HG IR G +D + +
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L++MYAKCG+I AR +F M D VSW ++I G + DA+ + M K G+
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 241 PNSVAFVAVLTACSHAGLI 259
P++ A ++ L++C+ G I
Sbjct: 202 PSNFALISALSSCASLGCI 220
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 314/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V W ++I G +NG +++AL +M ++ D L S L + G
Sbjct: 237 MPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFG 296
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL-LPVKDAISWNSIIAGCVQ 119
K +H ++ G + IG++L +MY+K + + +F + +S +II G V+
Sbjct: 297 KSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVE 356
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
++ L F + I+P +F+S++ ACA+ L G QLHG +++ F + F+
Sbjct: 357 MDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFV 416
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S+L+DMY KCG + +FD+++ D ++W ++ + HG +AI F M G+
Sbjct: 417 SSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGL 476
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN+V FV +L CSHAG+++ +YF+SM K YG+ P EHY+ V DLLGRAGKL+EA
Sbjct: 477 KPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAE 536
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI+NM P W + L AC++H ++E A A+K+ ++P N GA+V+LSN YA +
Sbjct: 537 DFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEK 596
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+D SLR +++ M K P SW++++NK + F D SHP I E L LL++++
Sbjct: 597 QWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIK 656
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP T+ VL D+++ K+ LL+YHSER+A+ F ++ P G I + KNLRVC DCH+
Sbjct: 657 RIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHS 716
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+KFISK+ +R IIVRD SRFHHF +G CSCGDYW
Sbjct: 717 ALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 5/326 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++I G A N ++EAL+ QM F LSSVL + G
Sbjct: 136 MSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFG 195
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H ++ G + +GS+L +MY+KC + D+ + F +P KDA+ W S+I G V+N
Sbjct: 196 TQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKN 255
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F + L + +M+ + S + AC+ L GK LH I++ GF+ FI
Sbjct: 256 GDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIG 315
Query: 181 SSLLDMYAKCGNIRLARCIFD-KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L DMY+K G++ A +F D IVS TA+I G A+S F + + G+
Sbjct: 316 NALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGI 375
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
+PN F +++ AC++ ++ + K ++ P + + D+ G+ G +
Sbjct: 376 EPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHS 433
Query: 299 YEFISNMHAGPTENVWLTLLSACRVH 324
+ + P E W TL+ H
Sbjct: 434 IQLFDEIE-NPDEIAWNTLVGVFSQH 458
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 160/341 (46%), Gaps = 38/341 (11%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D+ T++ ++ +A ++ KGK++H IR G N + + +N+Y+KC ++ + +LF
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ ++ +SW SII G N F E L F QM I + SS++ AC L +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
G Q+H +++ GF +F+ S+L DMY+KCG + A F++M D V WT++I G
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFV 253
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS-----------HAGLIDKAWSY--- 265
+G+ A++ + +M D V + + L+ACS HA ++ + Y
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313
Query: 266 -FNSMTKDYGIAP----------------SFEHYAAVADLLGRAGKLQEAYE-FISNMHA 307
N++T Y + S A+ D ++++A F+
Sbjct: 314 IGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRR 373
Query: 308 G--PTENVWLTLLSAC----RVHKNVELAGKVAEKIFMIDP 342
G P E + +L+ AC ++ +L G+V + F DP
Sbjct: 374 GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDP 414
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/511 (40%), Positives = 320/511 (62%), Gaps = 1/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +N++I + G +A+ R+M + + P ++T +SV+ AD + G +H
Sbjct: 72 DSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVH 131
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G +N + ++L+ YAK + ++F +P + I+WNS+I+G QNGL
Sbjct: 132 SHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLAS 191
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M + +P +F S++ AC+ L +L LG LH CI+ G N+ +A+SL+
Sbjct: 192 EAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLV 251
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+M+++CG++ AR +FD M+ ++VSWTA+I G +HG +A+ +F +M+ GV PN V
Sbjct: 252 NMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRV 311
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+VAVL+AC+HAGLI++ F SM ++YG+ P EH+ + D+ GR G L EAY+F+
Sbjct: 312 TYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRG 371
Query: 305 MHAGP-TENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+ + VW +L AC++HKN +L +VAE + +P N G YV+LSN YA A R
Sbjct: 372 LSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDR 431
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
S+R M +G+KK S I+V+N++Y F GDKSHP + I L EL+ R + GY
Sbjct: 432 VESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGY 491
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
P + +H++EEE+++ L YHSE+LA+ FG++ T G T+RI+KNLR+C DCH+AIKF
Sbjct: 492 APAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKF 551
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IS ++ REIIVRD RFHHF +G CSC DYW
Sbjct: 552 ISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 137/264 (51%), Gaps = 2/264 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H + + G + + + L+ + + + RLF + D+ +NS+I
Sbjct: 27 QQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNF 86
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + F+R+ML ++I P +F+S++ ACA L+ L LG +H + +G+ N F+
Sbjct: 87 GFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQ 146
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAK R+AR +FD+M I++W ++I G +G A +A+ +F +M + G +
Sbjct: 147 AALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGE 206
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S FV+VL+ACS G +D + + GI + ++ ++ R G + A
Sbjct: 207 PDSATFVSVLSACSQLGSLDLG-CWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARA 265
Query: 301 FISNMHAGPTENVWLTLLSACRVH 324
+M+ G + W ++S +H
Sbjct: 266 VFDSMNEGNVVS-WTAMISGYGMH 288
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 6/275 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++WN++I G +NGL EA+ + +M +PDS T SVL + + G
Sbjct: 169 MPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + G+ NV + +SL+NM+++C V + +F + + +SW ++I+G +
Sbjct: 229 CWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMH 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ F +M + P V++ +++ ACAH ++ G+ + + + G +
Sbjct: 289 GYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEH 348
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS--WTAVIMGNALHGNAHDAISLFEQM-EK 236
++DM+ + G + A + ++V WTA++ +H N + + E +
Sbjct: 349 HVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISA 408
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ P ++ + A AG +D+ S N M +
Sbjct: 409 EPENPGHYVLLSNMYAL--AGRMDRVESVRNVMIQ 441
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/464 (43%), Positives = 295/464 (63%), Gaps = 5/464 (1%)
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ GK IH + GL++N + ++L+NMY K ++++ R+F L KD +SW +++
Sbjct: 25 ADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEATRVFRGLERKDLVSWTALM 84
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKI---KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+ + L+ E L+ FR+M + + KP F+ ++ ACA L+ G+ H I
Sbjct: 85 SAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQEC 144
Query: 172 GFDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G+D + + +++MY KCGN+R A +FD M D V+WT +I G A HG++ +++ +
Sbjct: 145 GYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLM 204
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M++DG KP+ V+ + VL+ CSHAGL+++ W +F +TK++G+ P +HY + DLLG
Sbjct: 205 FWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLG 264
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
R+G L+ A I M T W L+AC+VH + E + AEK+ ++P AYV
Sbjct: 265 RSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVP-AAYVS 323
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YAAA W +R M+ G++K P S IEV ++ + F AGDKSHP I
Sbjct: 324 LSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGL 383
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L+ L +ME GYVPDTK VL +V EEQK+ LL +HSE+LAI FG++ TP G+++RIIKN
Sbjct: 384 LESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKN 443
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LRVCGDCHTA KF+S+I REI +RD+ RFHHF+DG CSCGDYW
Sbjct: 444 LRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 9/279 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
DLVSW ++ +R LY EAL + R+M G KPD + +L A +G+
Sbjct: 76 DLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGR 135
Query: 62 EIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
H G D ++ +G +INMY KC + +H +F + +D ++W +II+G +
Sbjct: 136 LAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHH 195
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E L F +M KP VS ++ C+H + G I + G +
Sbjct: 196 GHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKH 255
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ-MEKD 237
++D+ + G++ A + +M ++W + +H + E+ +E +
Sbjct: 256 YGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELE 315
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM--TKDYG 274
V V+ + A +D+ S +M KD G
Sbjct: 316 PVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPG 354
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 138 IKPRHVSFSSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+ P + F + + AC L L LGK +H C++ G + N +A++L++MY K G + A
Sbjct: 6 VLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEA 65
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME---KDGVKPNSVAFVAVLTAC 253
+F ++ D+VSWTA++ + +A+ LF +M DG KP+ F +L AC
Sbjct: 66 TRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQAC 125
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYA-AVADLLGRAGKLQEAYEFISNMHAGPTEN 312
+ + + ++ G S + ++ G+ G L+ A+E M T
Sbjct: 126 ATLSAAAEG-RLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDT-V 183
Query: 313 VWLTLLSACRVHKNVE 328
W T++S H + E
Sbjct: 184 AWTTIISGYAHHGHSE 199
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V+W T+I G A +G EE+L + +M KPD +L VL + + V +G
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236
Query: 61 KEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
+ + + G C +I++ + +E + + +P + A++W +
Sbjct: 237 WDFFLDITKEFGVEPGEKHYGC----MIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFL 292
Query: 115 AGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPA 151
A C + + G + ++L + + +VS S+I A
Sbjct: 293 AACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAA 330
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/516 (41%), Positives = 305/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN + G Y++AL + + +P+ T + L A + G
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG+ ++ G +A+V + + LI+ Y KC +V S +F + + +SW S+I VQN
Sbjct: 229 RQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ F + I+P SS++ ACA L+ L +GK +H ++ N+F+
Sbjct: 289 DEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KDG 238
S+L+DMY KCG+I A FD+M ++V+W A+I G A G A A++LF++M
Sbjct: 349 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 408
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V PN V FV VL+ACS AG ++ F SM YGI P EHYA V DLLGRAG +++A
Sbjct: 409 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 468
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FI M PT +VW LL A ++ EL A+ +F +DP + G +V+LSN +AAA
Sbjct: 469 YQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAA 528
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW++A +R M++ G+KK CSWI N + F A D SH I L +L M
Sbjct: 529 GRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEM 588
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E GY+PDT L D+EEE+K ++YHSE++A+ FG+I P G IRI KNLR+CGDCH
Sbjct: 589 EAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCH 648
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+AIKFIS IV REIIVRDN+ FH F D +CSC DYW
Sbjct: 649 SAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +V+W +I G +NG + AL M +++P+ FT + GK
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGK 128
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H A++ G ++V +G S +MY+K E++ ++F +P ++ +WN+ ++ V G
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+D+ L F + +P ++F + + ACA + L LG+QLHG ++++GF+ ++ +A+
Sbjct: 189 RYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVAN 248
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D Y KC + + IF + + VSW ++I+ + A +F + K+G++P
Sbjct: 249 GLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEP 308
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+VL+AC+ +++ S K + F +A+ D+ G+ G +++A
Sbjct: 309 TDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG-SALVDMYGKCGSIEDAERA 367
Query: 302 ISNMHAGPTENV 313
M P N+
Sbjct: 368 FDEM---PERNL 376
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
L+NMY+K R + L L P + ++W ++IAG VQNG F L F M I+P
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+F A L + +GKQ+H ++ G ++F+ S DMY+K G AR +FD
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+M +I +W A + + L G DA++ F + +G +PN + F A L AC+ A +
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYL 225
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM--FIASSLLDMYAKCGNIRLARCIFD 201
S +S++ + LG+ H II+ D+ + FI + L++MY+K A+ +
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS--HAGLI 259
+V+WTA+I G+ +G A+ F M +D ++PN F A + L+
Sbjct: 67 LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
K K I+ F +A D+ +AG +EA + M P N+ W
Sbjct: 127 GKQVHAL--AVKAGQISDVFVGCSAF-DMYSKAGLTEEARKMFDEM---PERNIATWNAY 180
Query: 318 LS 319
LS
Sbjct: 181 LS 182
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 309/515 (60%), Gaps = 3/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I GL +N EAL++ + M +K S + V+ A+ G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG I+ G + +SLI YA C R+ DS ++F + W ++++G N
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L F ML I P +F+S + +C+ L TL GK++HG ++ G + + F+
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+ GN+ A +F K+ IVSW ++I+G A HG A +F QM + +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG-IAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + F +L+ACSH G ++K F M+ I +HY + D+LGR GKL+EA
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I M P E VWL LLSACR+H +V+ K A IF +D + AYV+LSN YA+A
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + + LRV M+ G+ K P SW+ ++ K + F +GD+ H RI E L+ L E+++
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC--SRIYEKLEFLREKLK 602
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY PD + LHDVE+EQK+ +L+YHSERLAI FG+I T +G+ + ++KNLRVC DCHT
Sbjct: 603 ELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHT 662
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS +V REI++RD RFHHF++G CSCGDYW
Sbjct: 663 VIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 10/261 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+VSWN++I G G A+ + +M P+ +S + + G
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRS---G 142
Query: 61 KEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K + + + + +S+++ Y + +V+D+ +LF +P K+ ISW ++I G Q
Sbjct: 143 KVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N E L F+ ML IK F+ ++ ACA+ H+G Q+HG II+ GF ++
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYV 262
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++SL+ YA C I +R +FD+ + WTA++ G +L+ DA+S+F M ++ +
Sbjct: 263 SASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Query: 240 KPNSVAFVAVLTACSHAGLID 260
PN F + L +CS G +D
Sbjct: 323 LPNQSTFASGLNSCSALGTLD 343
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+V + + +I Y + R+ D+ LF +PV+D +SWNS+I+GCV+ G + +K F +M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQL-HGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ VS+++++ C + ++L + +++ N S++ Y + G +
Sbjct: 125 ERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQFGKV 175
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A +F +M +++SWT +I G + + +A+ LF+ M + +K S F V+TAC
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 254 SHA 256
++A
Sbjct: 236 ANA 238
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 316/508 (62%), Gaps = 10/508 (1%)
Query: 12 VIVGLARNGLYEEA--LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY-AI 68
+ VG +Y E + R++ + +P++ ++++ D+ G+E+ +
Sbjct: 141 LFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPV 200
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
R+ + NV + Y K +E + +F +P+KD +SW+++I G NG F+E
Sbjct: 201 RNLMSWNVMLAG-----YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFS 255
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FFR++ ++P S + ++ ACA L GK LHG I ++G + + ++LLD Y+
Sbjct: 256 FFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYS 315
Query: 189 KCGNIRLARCIFDK-MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCGN+ +A+ +F++ M+ +IVSWT+++ A+HG+ +AI +F +ME+ G++P+ +AF+
Sbjct: 316 KCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFI 375
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
++L ACSHAGL+++ YF+ M Y I PS EHY + DL GRAG+LQ+AYEF+ M
Sbjct: 376 SLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPI 435
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
T +W TLL AC +H +V+LA +V E++ +DPNN +V+LSN YA A +WKDAAS+
Sbjct: 436 PCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASV 495
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE-GYVPD 426
R M + + KTP S IEV Y F+AG K + + LKE++ R+ E GYVP+
Sbjct: 496 RRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPE 555
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
VLHD+EEE+K+ + HSE+LA+ FGI G TIRI+KNLR+C DCH +K IS+
Sbjct: 556 IGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQ 615
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I + EI+VRD SRFH F+DG CSC DYW
Sbjct: 616 IYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 142/281 (50%), Gaps = 16/281 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ D VSW+T+IVG A NG +EEA + R++ ++P+ +L+ VL A + G
Sbjct: 229 MPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFG 288
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQ 119
K +HG+ + GL V + ++L++ Y+KC V + +F ++ ++ +SW S++A
Sbjct: 289 KILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAM 348
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E + F +M + I+P ++F S++ AC+H + GC + I
Sbjct: 349 HGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVE-----QGCEYFDKMKGMYNI 403
Query: 180 ASS------LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFE 232
S ++D+Y + G ++ A +M + + W ++ ++HG+ A + E
Sbjct: 404 EPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKE 463
Query: 233 QMEKDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ + + P NS V + A + AG A S SMT+
Sbjct: 464 RLSE--LDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQ 502
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 318/532 (59%), Gaps = 20/532 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
P D+VSWNT+I GL + G AL + M P +F+++ +L V+V
Sbjct: 226 FPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEV- 284
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF----------------CLL 102
G+++HG + GL+++ I SSL+ MY KC R++ + + C
Sbjct: 285 -GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKE 343
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S+++G V NG +++G+K FR M+ I + ++I+ ACA+ L GK
Sbjct: 344 PKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGK 403
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q+H I + G + ++ SSL+DMY+K G++ A IF+++ ++V WT++I G ALHG
Sbjct: 404 QIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHG 463
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+AISLFE M G+ PN V FV VL ACSH GLI++ YF M Y I P EHY
Sbjct: 464 QGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHY 523
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP 342
++ +L GRAG L EA FI +VW + LS+CR+HKN + V+E + P
Sbjct: 524 TSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAP 583
Query: 343 NNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHP 402
++ AY++LSN ++ +W +AA +R M +G+KK P SW+++K++ ++F GD+SHP
Sbjct: 584 SDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHP 643
Query: 403 FYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG 462
I L L+ R+++ GY D K V+ DVEEEQ + L+ +HSE+LA+VF II T
Sbjct: 644 QDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPR 703
Query: 463 TTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
T IRI+KNLR+C DCH K+ S++++REIIVRD RFHHF+ CSCG+YW
Sbjct: 704 TPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 174/379 (45%), Gaps = 54/379 (14%)
Query: 8 SWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+W +I G AR G E ++ R+M P+ +TLSSVL + ++ GK IH +
Sbjct: 100 TWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAW 159
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R+G+ +V + +S++++Y KC E + F L+ KD +SWN +I ++ G ++
Sbjct: 160 ILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKS 219
Query: 127 LKFFRQ-------------------------------MLIAKIKPRHVSFSSIMPACAHL 155
L+ FR M+ + V+FS + + L
Sbjct: 220 LEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSL 279
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH--------- 206
+ + +G+QLHG ++ G + + +I SSL++MY KCG + A I + L+
Sbjct: 280 SLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGV 339
Query: 207 -------DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+VSW++++ G +G D + F M + + + +++AC++AG++
Sbjct: 340 TCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGIL 399
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
+ ++ + G+ +++ D+ ++G L +A + P +W +++S
Sbjct: 400 EFG-KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE-PNVVLWTSMIS 457
Query: 320 ACRVHKNVELAGKVAEKIF 338
C +H GK A +F
Sbjct: 458 GCALHGQ----GKEAISLF 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG+ + G + + L+ +Y K + ++ +H+LF + K+ +W +I+G +
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 121 -GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G + FR+M P + SS++ C+ + GK +H I+RNG ++ +
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDG 238
+S+LD+Y KC A F+ M D+VSW +I G+ ++ +F KD
Sbjct: 172 ENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDV 231
Query: 239 VKPNSV 244
V N++
Sbjct: 232 VSWNTI 237
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA-L 220
+ LHG + G + A+ LL +Y K N+ A +FD++ + +WT +I G A
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID-----KAWSYFNSMTKDYGI 275
G++ SLF +M+ DG PN +VL CS I AW N + D +
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNM 305
S + DL + + + A F M
Sbjct: 172 ENS------ILDLYLKCKEFEYAESFFELM 195
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/464 (43%), Positives = 295/464 (63%), Gaps = 5/464 (1%)
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
D+ GK IH + GL++N + ++L+NMY K ++++ R+F L KD +SW +++
Sbjct: 25 ADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEATRVFRGLGRKDLVSWTALM 84
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKI---KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+ + L+ E L+ FR+M + + KP F+ ++ ACA L+ G+ H I
Sbjct: 85 SAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQEC 144
Query: 172 GFDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G+D + + +++MY KCGN+R A +FD M D V+WT +I G A HG++ +++ +
Sbjct: 145 GYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLM 204
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M++DG KP+ V+ + VL+ CSHAGL+++ W +F +TK++G+ P +HY + DLLG
Sbjct: 205 FWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLG 264
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
R+G L+ A I M T W L+AC+VH + E + AEK+ ++P AYV
Sbjct: 265 RSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVP-AAYVS 323
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YAAA W +R M+ G++K P S IEV ++ + F AGDKSHP I
Sbjct: 324 LSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGL 383
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L+ L +ME GYVPDTK VL +V EEQK+ LL +HSE+LAI FG++ TP G+++RIIKN
Sbjct: 384 LESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKN 443
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LRVCGDCHTA KF+S+I REI +RD+ RFHHF+DG CSCGDYW
Sbjct: 444 LRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 9/279 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
DLVSW ++ +R LY EAL + R+M G KPD + +L A +G+
Sbjct: 76 DLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGR 135
Query: 62 EIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
H G D ++ +G +INMY KC + +H +F + +D ++W +II+G +
Sbjct: 136 LAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHH 195
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E L F +M KP VS ++ C+H + G I + G +
Sbjct: 196 GHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKH 255
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQ-MEKD 237
++D+ + G++ A + +M ++W + +H + E+ +E +
Sbjct: 256 YGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELE 315
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM--TKDYG 274
V V+ + A +D+ S +M KD G
Sbjct: 316 PVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPG 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 138 IKPRHVSFSSIMPACAH-LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
+ P + F + + AC L L LGK +H C++ G + N +A++L++MY K G + A
Sbjct: 6 VLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEA 65
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME---KDGVKPNSVAFVAVLTAC 253
+F + D+VSWTA++ + +A+ LF +M DG KP+ F +L AC
Sbjct: 66 TRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQAC 125
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYA-AVADLLGRAGKLQEAYEFISNMHAGPTEN 312
+ + + ++ G S + ++ G+ G L+ A+E M T
Sbjct: 126 ATLSAAAEG-RLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDT-V 183
Query: 313 VWLTLLSACRVHKNVE 328
W T++S H + E
Sbjct: 184 AWTTIISGYAHHGHSE 199
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D V+W T+I G A +G EE+L + +M KPD +L VL + + V +G
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236
Query: 61 KEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
+ + + G C +I++ + +E + + +P + A++W +
Sbjct: 237 WDFFLDITKEFGVEPGEKHYGC----MIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFL 292
Query: 115 AGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPA 151
A C + + G + ++L + + +VS S+I A
Sbjct: 293 AACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAA 330
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 305/510 (59%), Gaps = 8/510 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ +WNT+ G A + AL RQM ++PD+ T +L + ++V +G+ IH
Sbjct: 94 NVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIH 153
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR+G ++ V + +SL+++YA C E +H +F L+ +D ++ S+I G NG
Sbjct: 154 SVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPS 213
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+M ++P + S++ A A L L LG+++H +++ G +N + +SLL
Sbjct: 214 EALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLL 273
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+YAKC I + VSWT++I+G A++G +A+ LF +ME G+ P+ +
Sbjct: 274 DLYAKCDAIWEXE--------RNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEI 325
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL ACSH G++D+ + YF M +++GI P EHY + DLL RAG +++AYE+I N
Sbjct: 326 TFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQN 385
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLL AC +H ++ L + ++P + G YV+LSN Y + RW D
Sbjct: 386 MPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADV 445
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M G+KKT S +E+ N+ Y F G++SHP + L+++ E ++ EGYV
Sbjct: 446 QLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYV 505
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P T VL D+EEE+K+ L YHSE+ AI F + T GTTIR++KNLRVC DCH AIK +
Sbjct: 506 PHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLM 565
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K+ REI++RD RFHHF G CSC DYW
Sbjct: 566 AKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 118/215 (54%), Gaps = 13/215 (6%)
Query: 59 KGKEIHGYAIRHG-LDANVCIGSSLINMYAKCAR------------VEDSHRLFCLLPVK 105
K + IH ++IRHG L N +G LI + + ++ +F ++
Sbjct: 34 KLRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHNP 93
Query: 106 DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+ +WN++ G ++ L+F+RQM++++I+P ++ ++ A + + G+ +H
Sbjct: 94 NVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIH 153
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
IRNGF+ +F+ +SLL +YA CG+ A +F+ M D+V+ +VI G AL+G
Sbjct: 154 SVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPS 213
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+A++LF +M +GV+P+ V++L+A + G ++
Sbjct: 214 EALTLFREMSAEGVEPDGFTVVSLLSASAELGALE 248
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/531 (38%), Positives = 320/531 (60%), Gaps = 38/531 (7%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G RN EA+ + +M + L P+S TLSSVLP + + IH
Sbjct: 357 WNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCV 416
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ G + + + ++L++MY++ R+E + +F + KD +SWN++I G V G D+ L
Sbjct: 417 VKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDAL 476
Query: 128 KFFRQMLIAK------------------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
M + +KP V+ +++P CA L L GK++H +
Sbjct: 477 NLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 536
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+ ++ + S+L+DMYAKCG + L+R +F++M + ++++W +IM +HG +A+
Sbjct: 537 KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALK 596
Query: 230 LFEQMEKDG-----VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
LF +M ++G ++PN V ++A+ + SH+G++D+ + F +M +GI P+ +HYA
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
+ DLLGR+G+++EAY I M + + + W +LL AC++H+N+E+ A+ +F++DPN
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN 716
Query: 344 NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPF 403
+ Y + + L M+ KG++K P CSWIE ++ + F+AGD SHP
Sbjct: 717 VL--------DYGTKQ-----SMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQ 763
Query: 404 YHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGT 463
++E L+ L RM++EGYVPDT VLH+V EE+K+ +L HSERLAI FG++ T GT
Sbjct: 764 SKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGT 823
Query: 464 TIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TIR+ KNLRVC DCH A KFISKIV REII+RD RFHHF +G CSCGDYW
Sbjct: 824 TIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 165/306 (53%), Gaps = 7/306 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD-VIKGKEI 63
D VSWN++I R +E A+++ R M N+ P SFTL SV ++ ++ ++ GK++
Sbjct: 150 DDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQV 209
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + +R+G D ++L+ MYAK RV ++ LF + KD +SWN+II+ QN F
Sbjct: 210 HAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRF 268
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNMFIASS 182
+E L + ML + ++P V+ +S++PAC+HL L GK++H ++ N +N F+ +
Sbjct: 269 EEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCA 328
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKP 241
L+DMY C R +FD M I W A+I G + ++AI LF +M + G+ P
Sbjct: 329 LVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSP 388
Query: 242 NSVAFVAVLTACSHA-GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
NSV +VL AC +DK +S +G A+ D+ R G+++ A
Sbjct: 389 NSVTLSSVLPACVRCESFLDK--EGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARS 446
Query: 301 FISNMH 306
+M+
Sbjct: 447 IFGSMN 452
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 129/239 (53%), Gaps = 2/239 (0%)
Query: 22 YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSS 81
+ +A++ M + PD+F +VL A D+ GK++H + + G + +S
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
L+NMY KC ++ + R+F + +D +SWNS+I + ++ + FR ML+ + P
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185
Query: 142 HVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
+ S+ AC++L L LGKQ+H ++RNG D F ++L+ MYAK G + A+ +F
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
D D D+VSW +I + + +A+ M + GV+PN V +VL ACSH ++
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEML 303
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 26/249 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG------------------NVNLKPDSF 42
M D+VSWNT+I G G +++ALN++ M N LKP+S
Sbjct: 451 MNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSV 510
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
TL +VLP A + KGKEIH YA++ L +V +GS+L++MYAKC + S +F +
Sbjct: 511 TLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM 570
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-----KIKPRHVSFSSIMPACAHLTT 157
V++ I+WN +I +G +E LK FR+M+ +I+P V++ +I + +H
Sbjct: 571 SVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGM 630
Query: 158 LHLGKQL-HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAV 214
+ G L + ++G + + L+D+ + G I A + M ++ + +W+++
Sbjct: 631 VDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSL 690
Query: 215 IMGNALHGN 223
+ +H N
Sbjct: 691 LGACKIHQN 699
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/563 (40%), Positives = 324/563 (57%), Gaps = 54/563 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV----------NLKPD--------SF 42
M V D+V W+++I +G EAL I QM V +++P S
Sbjct: 399 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSC 458
Query: 43 TLSSVLP--------------------IFADY----VDVIKGKEIHGYAIRHGLDANVCI 78
TL++ +P IF Y D+ K I Y GL + I
Sbjct: 459 TLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSN-IFAY----GLQYDSRI 513
Query: 79 GSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 138
+ MY R++ + +F +P + WN +I G +G F L+ + +M+ +
Sbjct: 514 LTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGL 573
Query: 139 KP-------RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
KP VS S++ AC +L L G+ H +I+ GF+ ++ +A++++DMY+KCG
Sbjct: 574 KPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 633
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
++ LARC+FD+ D+V W+A+I +HG+ AI LF+QM K GV+P+ V F VL+
Sbjct: 634 SLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 693
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
ACSH+GL+++ YF MT+++ IA +YA + DLLGRAG+L EA + I NM P
Sbjct: 694 ACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDA 753
Query: 312 NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFM 371
++W +LL ACR+H N++LA K+A+ +F +DP + G +V+LSN YAA RW + +R M
Sbjct: 754 SIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMM 813
Query: 372 RNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVL 431
+G K S +E N+ + F GD+SHP + ++ L+EL M+ GYVP T VL
Sbjct: 814 ARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVL 873
Query: 432 HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQRE 491
HD+EEE K+ L YHSERLAI FG+I T GTT+RI KNLR+CGDCH AIK ISKIV R
Sbjct: 874 HDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRV 933
Query: 492 IIVRDNSRFHHFEDGKCSCGDYW 514
I+VRD RFH FEDG CSCGDYW
Sbjct: 934 ILVRDMHRFHRFEDGVCSCGDYW 956
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 35/234 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SW+T+I A N EALN+ +M +P+S T+ S L A ++ +G
Sbjct: 232 MPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 291
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH A+ KD +SW ++++G QN
Sbjct: 292 KKIHKIAVW-----------------------------------KDVVSWVALLSGYAQN 316
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G+ + + FR ML I+P V+ I+ A + L LHG ++R+GF+ N+F+
Sbjct: 317 GMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVG 376
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+SL+++Y+KCG++ A +F M + D+V W+++I +HG +A+ +F+QM
Sbjct: 377 ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 430
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 36/255 (14%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P ++ WN+ + R +EE L + M PD+FT+ L A + G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K IHG+A ++ + +++ +GS+L+ +Y+KC ++ ++ ++F D + W S++ G Q
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N +E L F QM +M C FD ++ +
Sbjct: 183 NNDPEEALALFSQM--------------VMMDC--------------------FDGDLPL 208
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL++YAK G ++A +F KM D++SW+ +I A + A++A++LF +M +
Sbjct: 209 VNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRF 268
Query: 240 KPNSVAFVAVLTACS 254
+PNSV V+ L AC+
Sbjct: 269 EPNSVTVVSALQACA 283
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 52/367 (14%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++ G A+NG+ +++ + R M + ++PD+ + +L ++ + +H
Sbjct: 302 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLH 361
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY +R G ++NV +G+SLI +Y+KC + D+ +LF + V+D + W+S+IA +G
Sbjct: 362 GYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGG 421
Query: 125 EGLKFFRQMLIA----------KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF- 173
E L+ F QM+ ++P+ V + +C T H+ ++ +R F
Sbjct: 422 EALEIFDQMIQVMQGITSCYQISMQPQ-VQPPLAITSCTLAT--HIPWKVKAFYMRAHFR 478
Query: 174 --------------------DDNMF---------IASSLLDMYAKCGNIRLARCIFDKMD 204
N+F I + MY I A +F+ +
Sbjct: 479 WLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIP 538
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK-------PNSVAFVAVLTACSHAG 257
W +I G A G ++ L+ +M + G+K PN V+ ++VL AC + G
Sbjct: 539 NPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLG 598
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTL 317
+ K +F+S G A+ D+ + G L A + + AG W +
Sbjct: 599 ALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA-RCLFDETAGKDLVCWSAM 656
Query: 318 LSACRVH 324
+++ +H
Sbjct: 657 IASYGIH 663
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 71/320 (22%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W +++ G +N EEAL + QM + D F
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQM----VMMDCF---------------------- 202
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
D ++ + +SL+N+YAK + + LF +P KD ISW+++IA N +
Sbjct: 203 --------DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 254
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L F +M+ + +P V+ S + ACA L GK++H +
Sbjct: 255 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV--------------- 299
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+VSW A++ G A +G A+ ++ +F M DG++P++V
Sbjct: 300 --------------------WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 339
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
A V +L A S G+ +A + + G + A++ +L + G L +A +
Sbjct: 340 AVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKG 398
Query: 305 MHAGPTENVWLTLLSACRVH 324
M +W ++++A +H
Sbjct: 399 MIVRDVV-IWSSMIAAYGIH 417
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 15/280 (5%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H + G+ + + L ++YAKCA ++ + ++F P + WNS + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 122 LFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
++E L+ F M+ A P + + + ACA L L LGK +HG +N +MF+
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK--- 236
S+L+++Y+KCG + A +F++ D V WT+++ G + + +A++LF QM
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 237 -DGVKP--NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
DG P NS+ + T C A + F+ M + I+ S A A+
Sbjct: 202 FDGDLPLVNSLLNLYAKTGCEKI-----AANLFSKMPEKDVISWS-TMIACYANNEAANE 255
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
L +E I P ++ L AC V +N+E K+
Sbjct: 256 ALNLFHEMIEKRFE-PNSVTVVSALQACAVSRNLEEGKKI 294
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
QLH + + G + F A+ L +YAKC +++ AR +FD+ ++ W + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 223 NAHDAISLFEQME-KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
+ + LF M G P++ L AC+ +++ K+ I
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMID 341
+A+ +L + G++ EA + P +W ++++ + + + E A + ++ M+D
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQR-PDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 342 --PNNMGAYVILSNTYAAARRWKDAASLRVFMRNK 374
++ L N YA K AA+L M K
Sbjct: 201 CFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK 235
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/511 (39%), Positives = 309/511 (60%), Gaps = 8/511 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N ++ G N +A+ + RQM + +S TL ++P +++ G +H
Sbjct: 109 VCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 168
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+++G D++V + + I MY KC V + +LF +PVK ISWN++++G QNGL
Sbjct: 169 TLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNV 228
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ +R M + + P V+ ++ +CA+L +G ++ + +GF N F+ ++L++M
Sbjct: 229 LELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINM 288
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN+ A+ +FD M +VSWTA+I G +HG+ A+ LF++M + G++P+ AF
Sbjct: 289 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAF 348
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+ACSHAGL D+ YF M ++Y + P EHY+ + DLLGRAG+L+EA I +M
Sbjct: 349 VCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP 408
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL AC++HKNVELA E++ ++P N+G YV+LSN Y+ A K
Sbjct: 409 IKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLR 468
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R+ M+ K +KK P CS++E+K + + F+ GD++H I L+EL + QE P+
Sbjct: 469 IRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPE 528
Query: 427 TKEVLHDVEEEQKKN---LLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
D EE K+ + HSE+LA+ FG++ T G + IIKNLR+C DCH K
Sbjct: 529 K-----DNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKM 583
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKIV R++ VRD +RFHHF +G CSC DYW
Sbjct: 584 VSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 180/379 (47%), Gaps = 12/379 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT + LA+ + +AL++ QM +P++FT L A I G + HG
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ G + + LI+MY K + V+++ ++F K + +N++++G V N +
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ FRQM + V+ ++PAC L LG LH ++ GFD ++ + + + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG++ A+ +FD+M + ++SW A++ G A +G A + + L+ M+ +GV P+ V
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 247 VAVLTACSHAGLIDKAWSY-FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
V VL++C++ G F + P + A+ ++ R G L +A M
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM 305
Query: 306 HAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYAAARRW 361
P + W ++ +H + E+A ++ +++ I+P+ +LS A
Sbjct: 306 ---PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362
Query: 362 KDAASLRVFMRNKGMKKTP 380
+ ++ RN ++ P
Sbjct: 363 QGLEYFKMMKRNYQLEPGP 381
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV L+SWN ++ G A+NGL L + R M + PD TL VL A+ G
Sbjct: 204 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ G +N + ++LINMYA+C + + +F +P + +SW +II G +
Sbjct: 264 HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 323
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + ++ F++M+ + I+P +F ++ AC+H G + + RN +
Sbjct: 324 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 383
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S ++D+ + G ++ A+ + + M + D W A++ +H N A FE++ +
Sbjct: 384 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE-- 441
Query: 239 VKPNSVAFVAVLT 251
++P ++ + +L+
Sbjct: 442 LEPENIGYYVLLS 454
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 313/511 (61%), Gaps = 16/511 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V + +IVG ++GL EAL + M +KP+ +TL+SVL + D++ GK IH
Sbjct: 167 DVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIH 226
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G +++GL++ V +SL+ MY+KC VEDS ++F L ++W S I G VQNG +
Sbjct: 227 GLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREE 286
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M+ I P H + SSI+ AC+ L L G+Q+H ++ G D N F+ ++L+
Sbjct: 287 VALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALI 346
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCGN+ AR +FD + DIVS +I A +G H+A+ LFE+++K G++PN V
Sbjct: 347 HLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVV 406
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+++L AC++AGL+++ F+ + ++ I + +HY + DLLGRA + +EA I
Sbjct: 407 TFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEE 466
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
P W TLL+AC++H VE+A K +K+ P + G +++L+N YA+A +W +
Sbjct: 467 -GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNV 525
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++ R+ +KKTPA SW+++ + + F+AGD SHP H I+E L EL+E++ GY
Sbjct: 526 IEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYN 585
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICT-PDGTTIRIIKNLRVCGDCHTAIKF 483
PDTK VL D+EEE+K + LYYHSE+LAI F + T T IRI KNLRVCGD
Sbjct: 586 PDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGD------- 638
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
II RD RFHHF+ G CSC DYW
Sbjct: 639 -------YIIARDAKRFHHFKGGICSCKDYW 662
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 166/299 (55%), Gaps = 2/299 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +V+WN++I G +EA+ + M + PD++T S++ F++ +G
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 61 KEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++ HG A+ G + ++ + + +++MYAK +++D+ +F + KD + + ++I G Q
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+GL E L+ F M+ ++IKP + +S++ +C +L L GK +HG +++ G + +
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY+KC + + +F+ + V+WT+ I+G +G A+S+F +M + +
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSI 300
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN ++L ACS +++ A +++T G+ + AA+ L G+ G +++A
Sbjct: 301 SPNHFTLSSILHACSSLAMLE-AGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKA 358
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 111/198 (56%), Gaps = 2/198 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + ++ G G LI+ Y KC+ + ++ +LF +P + ++WNS+I+ V
Sbjct: 21 KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFI 179
G E ++ + ML + P +FS+I A + + G++ HG + GF+ + F+
Sbjct: 80 GKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+ ++DMYAK G ++ AR +FD++ D+V +TA+I+G HG +A+ +FE M +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRI 199
Query: 240 KPNSVAFVAVLTACSHAG 257
KPN +VL +C + G
Sbjct: 200 KPNEYTLASVLVSCGNLG 217
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++S++ C + +L K LH I+++G F L+D Y KC I AR +FD+M
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW- 263
IV+W ++I + G +AI L+ M +GV P++ F A+ A S G+ +
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++ ++ + ++ F + D+ + GK+++A
Sbjct: 123 AHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDA 156
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 325/541 (60%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W+ +I G ++GL+ +AL + +M N N++PD LS+VL ++ GK IH
Sbjct: 187 DVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIH 246
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCA-------------------------------RVE 93
+ + + + + + S+L+ MYA C ++E
Sbjct: 247 DFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIE 306
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ +F + KD + W+++I+G ++ E L F +M IKP V+ S++ ACA
Sbjct: 307 NARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACA 366
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
HL L K +H + +NGF + I ++L++MYAKCG++ AR IFDKM +++SWT
Sbjct: 367 HLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTC 426
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I A+HG+A A+ F QME + ++PN + FV VL ACSHAGL+++ F SM ++
Sbjct: 427 MISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEH 486
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
I P HY + DL GRA L+EA E + M P +W +L++ACRVH +EL
Sbjct: 487 NITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFA 546
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+++ +DP++ GA+V LSN YA ARRW+D +R M++KG+ K CS E+ N+ +
Sbjct: 547 AKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHE 606
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F+ D+SH I E L E++ +++ GY P+T +L D+EEE+KK ++ +HSE+LA+
Sbjct: 607 FLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALC 666
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+G++ G+ IRIIKNLRVC DCHT IK SK+ +REI+VRD +RFHH++DG CSC DY
Sbjct: 667 YGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDY 726
Query: 514 W 514
W
Sbjct: 727 W 727
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 174/349 (49%), Gaps = 39/349 (11%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N + L+R+ E+ L + +M L D F+ +L + +++G EIHG A +
Sbjct: 91 NRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAK 150
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
G D++ + + L+ MYA C R+ ++ +F + +D ++W+ +I G Q+GLF++ L
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F +M ++P + S+++ AC L GK +H I+ N + + S+L+ MYA
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYAS 270
Query: 190 CGNIRL-------------------------------ARCIFDKMDLHDIVSWTAVIMGN 218
CG++ L AR +F++M D+V W+A+I G
Sbjct: 271 CGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGY 330
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAP 277
A + +A++LF +M+ G+KP+ V ++V+TAC+H G +D+A W + +G A
Sbjct: 331 AESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGAL 390
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ A+ ++ + G L+ A M P +NV W ++SA +H
Sbjct: 391 PINN--ALIEMYAKCGSLERARRIFDKM---PRKNVISWTCMISAFAMH 434
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV W+ +I G A + +EALN+ +M ++ +KPD T+ SV+ A + +
Sbjct: 315 MVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA 374
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH + ++G + I ++LI MYAKC +E + R+F +P K+ ISW +I+ +
Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMH 434
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL-HGCIIRNGFDDNMFI 179
G L+FF QM I+P ++F ++ AC+H + G+++ + I +
Sbjct: 435 GDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVH 494
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHG 222
++D++ + +R A + + M L +++ W +++ +HG
Sbjct: 495 YGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSL-INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K++H +R LD + + L I+ A + ++ + +F L+P + N + +
Sbjct: 40 KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSR 99
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ ++ L + +M + SF ++ A + + +L G ++HG + GFD + F+
Sbjct: 100 SEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFV 159
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ MYA CG I AR +FDKM D+V+W+ +I G G +DA+ LFE+M+ V
Sbjct: 160 QTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNV 219
Query: 240 KPNSVAFVAVLTACSHAG 257
+P+ + VL+AC AG
Sbjct: 220 EPDEMMLSTVLSACGRAG 237
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/518 (38%), Positives = 322/518 (62%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D +N+VI ++ L + R+M + N+ P ++T +SV+ AD + G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H +A+ G + + ++L+ Y+KC +E + ++F +P K ++WNS+++G QN
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL DE ++ F QM + +P +F S++ ACA + LG +H II G D N+ +
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GV 239
++L+++Y++CG++ AR +FDKM ++ +WTA+I HG A+ LF +ME D G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN+V FVAVL+AC+HAGL+++ S + MTK Y + P EH+ + D+LGRAG L EAY
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 300 EFISNMHA---GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+FI + A +W +L AC++H+N +L ++A+++ ++P+N G +V+LSN YA
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ + + + +R M ++K S IEV+NK Y F GD+SH I L+ L+
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R ++ GY P ++EV+H VEEE+K+ L YHSE+LA+ FG++ T D I I+KNLR+C D
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICED 545
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K+IS + R+I VRD RFHHF++G CSC DYW
Sbjct: 546 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 314/520 (60%), Gaps = 6/520 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWN +I G G ++L + ++M PD FT +S L + G
Sbjct: 166 MPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGG 225
Query: 61 KEIHGYAIRHGLDANV--CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+IH I G ++ I S+++++YAKC + ++ ++F + K+ ISW+++I G
Sbjct: 226 TQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFA 285
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G E + FRQ+ + S +M A L + GKQ+H I++ ++
Sbjct: 286 QEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDIS 345
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A+S++DMY KCG A +F +M + ++VSWT +I G HG AI LF +M+ DG
Sbjct: 346 VANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDG 405
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++ + VA++A+L+ACSH+GLI ++ YF+ + ++ + P+ EHYA + D+LGRAG+L+EA
Sbjct: 406 IELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEA 465
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
I NM P E +W TLLSACRVH N+E+ +V E +F +D +N YV++SN YA A
Sbjct: 466 KNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEA 525
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
WK+ +R ++ KG+KK SW+E+ + + F GD +HP +I+E LKE+ R+
Sbjct: 526 GYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRV 585
Query: 419 EQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIIC---TPDGTTIRIIKNLRVC 474
++E GY + LHDVEEE K+ L HSE+LAI ++C G IR+ KNLRVC
Sbjct: 586 KEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVC 645
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GDCH IK +SKI+++ +VRD +RFH FEDG CSCGDYW
Sbjct: 646 GDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 162/313 (51%), Gaps = 13/313 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++ G + G + +L ++ +MG +KP+ FT S+ L V G
Sbjct: 65 MLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IHG ++ G + +G++ I+MY+KC R+ + ++F +P ++ +SWN++IAG
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM--F 178
G + L F++M P +F+S + AC L + G Q+H +I GF ++
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
IAS+++D+YAKCG + A+ +FD+++ +++SW+A+I G A GN +A+ LF Q+ +
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESV 304
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-----DYGIAPSFEHYAAVADLLGRAG 293
+ ++ + L+++ + K D +A S + D+ + G
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANS------IIDMYLKCG 358
Query: 294 KLQEAYEFISNMH 306
+EA S M
Sbjct: 359 LTEEAERLFSEMQ 371
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 132/241 (54%), Gaps = 1/241 (0%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G ++H A+ G ++ + + LI+MY KC+RV+ + +F + ++ +SW +++ G +
Sbjct: 22 QGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYL 81
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G L +M + +KP +FS+ + AC L + G Q+HG +++GF+
Sbjct: 82 QEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSV 141
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++ +DMY+KCG I +A +F+KM ++VSW A+I G+ GN ++ LF++M+ G
Sbjct: 142 VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM-TKDYGIAPSFEHYAAVADLLGRAGKLQE 297
P+ F + L AC G I S+ T+ + I+ +A+ DL + G L E
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261
Query: 298 A 298
A
Sbjct: 262 A 262
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ ++ C+ G Q+H + GF ++ + + L+DMY KC + LA +FD+M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++VSWTA++ G GNA +++L +M GVKPN F L AC G+++
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 265 YFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEAYEFISNM 305
K FE + V D+ + G++ A + + M
Sbjct: 127 IHGMCVK-----SGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKM 166
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 310/516 (60%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-DSFTLSSVLPIFADYVDVIK 59
MP D V+WN +I G A N EA+ + M + D T+ ++L + D+IK
Sbjct: 423 MPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIK 482
Query: 60 -GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G IH + + G D + + SSLI MYAKC + S +F L K + WN+IIA
Sbjct: 483 YGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANA 542
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G +E LK +M A I+ +FS+ + A L L G+QLHG I+ GF+ + F
Sbjct: 543 RYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHF 602
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I ++ +DMY KCG + A I + +SW +I +A HG H A F M K G
Sbjct: 603 IINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLG 662
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKPN V+FV +L+ACSH GL+D+ +Y+ SMT YGI P EH + DLLGR+G+L EA
Sbjct: 663 VKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEA 722
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
FI+ M P + VW +LL++CR+++N++L K A+ + +DP++ AYV+ SN +A
Sbjct: 723 EAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATI 782
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW+D +R M ++K PA SW++ K F GD++HP +IN L L++ +
Sbjct: 783 GRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIV 842
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPDT L D +EEQK++ ++ HSER+A+ FG+I P+G+T+RI KNLRVCGDCH
Sbjct: 843 GEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCH 902
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KF+S ++ R+I++RD RFHHF +G CSC DYW
Sbjct: 903 SFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 151/262 (57%), Gaps = 4/262 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
M D +SWN++I A+N L+EE+ M V+ + + TLS +L I VD +K
Sbjct: 221 MNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGS-VDYLKW 279
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +HG A+++GL++N+C+ ++L+++Y+ R +D+ +F +P +D ISWNS++A VQ
Sbjct: 280 GKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQ 339
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G LK F +ML K + +V+F+S + AC GK LHG ++ G D + I
Sbjct: 340 DGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELII 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y KC + A+ +F +M D V+W A+I G A + ++A++ F+ M +
Sbjct: 400 GNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGST 459
Query: 240 KP-NSVAFVAVLTAC-SHAGLI 259
+ + V +L +C +H LI
Sbjct: 460 SGVDYITIVNILGSCLTHEDLI 481
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 171/361 (47%), Gaps = 16/361 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DL+SWN+++ ++G AL + +M + + + T +S L D G
Sbjct: 322 MPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNG 381
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HG+ + GL + IG++LI Y KC ++ ++ ++F +P D ++WN++I G N
Sbjct: 382 KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANN 441
Query: 121 GLFDEGLKFFRQMLIAKIKP-RHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMF 178
+E + F+ M +++ +I+ +C H + G +H + GFD +
Sbjct: 442 AELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQH 501
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSL+ MYAKCG++ + IFD++ W A+I NA +G +A+ L +M G
Sbjct: 502 VQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAG 561
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA--AVADLLGRAGKLQ 296
++ + F L+ + ++++ S K + +H+ A D+ G+ G+L
Sbjct: 562 IEFDQFNFSTALSVAADLAMLEEGQQLHGSTIK---LGFELDHFIINAAMDMYGKCGELD 618
Query: 297 EAYEFISNMHAGPTEN---VWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
+A + PT+ W TL+S H A + + + PN++ +L
Sbjct: 619 DALRILPQ----PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLL 674
Query: 352 S 352
S
Sbjct: 675 S 675
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 135/253 (53%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++V + NG +E +N ++M + + + ++ V+ +D+I G
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ G+A++ GL+ V +SLI M+ C + ++ +F + +D ISWNSII+ QN
Sbjct: 180 HQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L +E ++F M + + + + S ++ C + L GK +HG ++ G + N+ +
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL +Y+ G + A IF +M D++SW +++ G A+ +F +M +
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359
Query: 241 PNSVAFVAVLTAC 253
N V F + L AC
Sbjct: 360 INYVTFTSALAAC 372
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSS-VLPIFADYVDVIK 59
M + SWN ++ G R G Y EA+ R + + +KP F ++S V + +
Sbjct: 18 MSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKE 77
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G + HG+AI+ GL +V +G+S ++ YA V ++ ++F +P ++ +SW S++
Sbjct: 78 GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSD 137
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E + +++M I + + ++ +C L + LG QL G ++ G + +
Sbjct: 138 NGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSA 197
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+ M+ CG+I A IF++M+ D +SW ++I NA + ++ F M
Sbjct: 198 ANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHE 257
Query: 240 KPNSVAFVAVLTAC 253
+ N +L+ C
Sbjct: 258 EINYTTLSILLSIC 271
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 119/237 (50%), Gaps = 3/237 (1%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY+K R+ + +F + ++ SWN +++G V+ G + E + FFR + IKP
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 145 FSSIMPACAHLTTL-HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+S++ AC + + G Q HG I+ G ++F+ +S + YA G + A+ +F++M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++VSWT++++ + +G+ + I+ +++M +G+ N V+++C I
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
K +G+ ++ + G G + EA + M+ T + W +++SA
Sbjct: 181 QLLGHALK-FGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTIS-WNSIISA 235
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 316/507 (62%), Gaps = 1/507 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G N +E A+ + M ++PD+FT VL A + +G +IHG+
Sbjct: 100 FNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVF 159
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+ +V + +SLINMY KC +E S +F + K SW++IIA ++ E L
Sbjct: 160 KLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLA 219
Query: 129 FFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
F M + +++ AC HL HLG+ HG +++N + N+ + +SL+DMY
Sbjct: 220 LFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMY 279
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG+++ C+F M + +S++ +I G LHG A+ +F +M ++G++P+ V +V
Sbjct: 280 VKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYV 339
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+VL+ACSH+GL+D+ F+ M +Y I P+ +HY + DL GRAG L+EA++ + +M
Sbjct: 340 SVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPI 399
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+ +W +LLSAC+VH N++L AE +F + +N Y++LSN YA A++W++AA +
Sbjct: 400 KANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKI 459
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M N+G+ +TP S +EVK+K Y FV+ DKS+ I + + ++ ++ EGY+PDT
Sbjct: 460 RTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDT 519
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
+V+ DV+EE+K L HS++LAI F +I T G+ IRII+NLR+C DCH+ K +S I
Sbjct: 520 SQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMI 579
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
+REI VRD +RFHHF+DG CSC DYW
Sbjct: 580 YEREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K++H ++ GL + SS++ A CA ++ + +F L +N++I
Sbjct: 49 KQVHVQILKFGLFLDSFCSSSVL---ATCALSDWNSMDYACSIFQQLDEPTTFDFNTMIR 105
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V N F+ + + ML +++P + ++ ++ ACA L + G Q+HG + + G +D
Sbjct: 106 GYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLED 165
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++++ +SL++MY KC +I ++ IF +M+ + SW+A+I +A + ++LFE M
Sbjct: 166 DVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMS 225
Query: 236 KDGV-KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
++G + V VL+AC+H G S+ K+ + ++ D+ + G
Sbjct: 226 REGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNI-TELNVAVMTSLMDMYVKCGS 284
Query: 295 LQEAYEFISNM 305
LQ+ NM
Sbjct: 285 LQKGLCLFQNM 295
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +S++ +I GL +G +AL I +M L+PD T SVL + V +G
Sbjct: 295 MTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEG 354
Query: 61 KEIHG-----YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
++ Y I + C ++++ + +E++ +L +P+K + + W S++
Sbjct: 355 LDLFDKMKFEYRIEPTMQHYGC----MVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLL 410
Query: 115 AGC 117
+ C
Sbjct: 411 SAC 413
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 312/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+WN V+ +G E + + P+ + + A + + G
Sbjct: 180 MPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLG 239
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HG+ ++ G + +V + +S+++ Y KC + +F + V++++SW S++A QN
Sbjct: 240 EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQN 299
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + + +P SS + CA L LHLG+ LH +R+ D N+F+A
Sbjct: 300 GAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVA 359
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-V 239
S+L+DMY KCG + A IF + ++V+W A+I G A G+A +A+ +F+ M + G
Sbjct: 360 SALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGET 419
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN + V V+T+CS GL + F +M + +GI P EHYA V DLLGRAG ++AY
Sbjct: 420 APNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAY 479
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I M P+ +VW LL AC++H EL AEK+F +DP + G +V+LSN +A+A
Sbjct: 480 EVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAG 539
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW +A +R M+N G+KK P CSW+ KN + F A D H Y+ I L +L ++M+
Sbjct: 540 RWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQ 599
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY+PDT+ L+D+EEE+K++ ++ HSE+LA+ FG+IC P G IRI+KNLR+C DCH
Sbjct: 600 AAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHR 659
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS IV REIIVRDN+RFHHF+ +CSCGDYW
Sbjct: 660 AFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 4/260 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD-VIKG 60
P +VS+ I G A++G AL+ M + L+P+ FT S A G
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+IH AIR G L + + + ++MY K R++ + LF +P ++ ++WN+++ V
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G E ++ + + A P VS + ACA L LG+Q HG +++ GF+ ++ +
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 257
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S++D Y KC AR +FD M + + VSW +++ A +G +A + + + G
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 317
Query: 240 KPNSVAFVAVLTACSHAGLI 259
+P + LT C AGL+
Sbjct: 318 EPTDFMVSSALTTC--AGLL 335
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Query: 60 GKEIHGYAIR---HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
G+ H A+R L +C + L+N+Y+K + P +S+ + I+G
Sbjct: 34 GRAAHARALRLIAPALSPFIC--AHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH-LGKQLHGCIIRNGF-D 174
Q+G L F ML ++P +F S A A +G Q+H IR G+
Sbjct: 92 AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ F++ + LDMY K G ++LAR +F +M ++V+W AV+ L G + I + +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 211
Query: 235 EKDGVKPNSVAFVAVLTACSHA 256
+ G PN V+ A AC+ A
Sbjct: 212 REAGGLPNVVSACAFFNACAGA 233
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 314/510 (61%), Gaps = 3/510 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
SWN +I A+NG A+ + R+M N KPD F++ S+L + ++ GK HG+
Sbjct: 340 SWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGF 399
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R+GL+ + I SL+++Y +C R + LF + KD +SWN++IAG QNGL E
Sbjct: 400 ILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGES 459
Query: 127 LKFFRQMLIAKIK--PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L+ FR+M K P ++ +S + AC+ L + LGK++H ++ ++ F++SS++
Sbjct: 460 LQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSII 519
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG++ AR FD++ D VSWT +I G A++G +A+ L+++M ++G++P+
Sbjct: 520 DMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGF 579
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++ +L AC HAG+++ +F M I EHYA V +L RAG+ +A +
Sbjct: 580 TYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEV 639
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P + ++LSAC +H VEL KVA+K+ ++P+ YV+ SN YA +R+W +
Sbjct: 640 MPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEM 699
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R +R+ G+ K P CSWI++ K Y+FVAG+ S P H++ + L E++ GY
Sbjct: 700 RKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYA 759
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT +LH++EEE+K L +HSE+ AI FG++ T T +R+ KN+R+C DCH A K I
Sbjct: 760 PDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLI 819
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REI+VRD RFHHF DG CSCGDYW
Sbjct: 820 SKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 18/263 (6%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ L WN ++ L+R G + +AL I+ ++ + + PD FTL L G
Sbjct: 27 AASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPAL----KSCRGDDG 82
Query: 61 KEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+++H A + GL D + +G+SL++MY +C RV+D+ ++F + ++ +SWN+++A
Sbjct: 83 RQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD 142
Query: 120 NGLFDEGLKFFR---QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
GL+ FR + L P + +++P CA L G+ +HG +++G+D
Sbjct: 143 P---RRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAA 199
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDL---HDIVSWTAVIMGNALHGNAHDAISLFE- 232
+++ L+DMYAKCG + A C F + ++VSW ++ G A +G A A L
Sbjct: 200 PRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLRE 259
Query: 233 -QMEKDGVKPNSVAFVAVLTACS 254
QME+ GV + + ++VL CS
Sbjct: 260 MQMEERGVPADEITMLSVLPVCS 282
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 11/264 (4%)
Query: 1 MPVSDLVSWNTVIVGLA--RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
M +LVSWN ++ +A R GL E + + +G PD TL +VLP+ A
Sbjct: 125 MAGRNLVSWNALMAAVADPRRGL-ELFRDCLEDLGGTA-APDEATLVTVLPMCAALAWPE 182
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV---KDAISWNSIIA 115
G+ +HG A++ G DA + + L++MYAKC + D+ F P ++ +SWN ++
Sbjct: 183 TGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLG 242
Query: 116 GCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
G +NG R+M + + + ++ S++P C+ L L ++LH ++R G
Sbjct: 243 GYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGL 302
Query: 174 D-DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+ ++L+ Y +CG + A +FD + + SW A+I +A +G A AI LF
Sbjct: 303 HLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFR 362
Query: 233 QMEKD-GVKPNSVAFVAVLTACSH 255
+M G KP+ + ++L AC +
Sbjct: 363 EMTNACGQKPDWFSIGSLLLACGN 386
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ D VSW +I G A NG +EA+ + +MG ++PD FT +L + + +++
Sbjct: 538 LKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLL-MACGHAGMLED 596
Query: 61 KEIHGYAIRH--GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+R+ ++A + + +I M ++ R D+ L ++P + DA +S+++ C
Sbjct: 597 GLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSAC 656
Query: 118 VQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPA 151
+G + G K ++L + K H +S M A
Sbjct: 657 HMHGEVELGKKVADKLLELEPHKAEHYVLASNMYA 691
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/523 (40%), Positives = 316/523 (60%), Gaps = 27/523 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W++VI G A+ G EA+++ RQM +P+ TL S+L A ++ GKE H
Sbjct: 139 DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETH 198
Query: 65 GYAIRHGLDA-------NVCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSIIA 115
Y+++ L ++ + ++LI+MYAKC +E + +F + KD ++W +I
Sbjct: 199 CYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 258
Query: 116 GCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
G Q+G + L+ F +M I P + S ++ ACA L L GKQ+H ++R
Sbjct: 259 GYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSR 318
Query: 174 DDN--MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
D+ +F+A+ L+DMY+K G++ A+ +FD M + VSWT+++ G +HG A
Sbjct: 319 IDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGAA------- 371
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
+ DG+ F+ VL ACSH+G++D+ F M+KD+ + P EHYA +ADL GR
Sbjct: 372 --LVLDGI-----TFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGR 424
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG+L EA I++M PT VW+ LLSACR H N ELA A+K+ + +N G Y +L
Sbjct: 425 AGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLL 484
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN YA ARRWKD A +R M+ G+KK P SW++ + F GD++H +I E L
Sbjct: 485 SNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETL 544
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
+L++R++ GYVP T LHDV++E+K + L HSE+LA+ + I+ P G IRI KNL
Sbjct: 545 ADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNL 604
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R+CGD H+AI +IS IV+ EII+RD+SRFH F++G CSC YW
Sbjct: 605 RICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 217/482 (45%), Gaps = 105/482 (21%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
VSWN+++ + + +A+ + R+M + PD+ + ++LP+ G
Sbjct: 24 VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPV-------------SG 70
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ +G++L++MYAKC ++ED+ ++F + KD ++WN+++ G QNG F++
Sbjct: 71 FL-------GFFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFED 123
Query: 126 GLKF-----------------------------------FRQMLIAKIKPRHVSFSSIMP 150
L FRQM + +P V+ S++
Sbjct: 124 ALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLS 183
Query: 151 ACAHLTTLHLGKQLHGCIIR-------NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
ACA + L GK+ H ++ N D++ + ++L+DMYAKC ++ +AR +FD++
Sbjct: 184 ACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEI 243
Query: 204 --DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK--DGVKPNSVAFVAVLTACSHAGLI 259
D+V+WT +I G A HG+A+ A+ LF +M K + + PN VL AC+ +
Sbjct: 244 CPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAAL 303
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYA-AVADLLGRAGKL---QEAYEFISNMHAGPTENV-- 313
+ + I A + D+ ++G + Q ++ +S +A ++
Sbjct: 304 KFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLT 363
Query: 314 ---------------WLTLLSACR----VHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
+L +L AC V + ++L +++ K F++DP + Y +++
Sbjct: 364 GYGMHGAALVLDGITFLVVLYACSHSGMVDRGIDLFYRMS-KDFVVDP-GVEHYACMADL 421
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
+ A R +A L + + M+ TP WI A ++ ++H A K+L
Sbjct: 422 FGRAGRLCEATRL---INDMSMEPTPVV-WI-------ALLSACRTHSNEELAEFAAKKL 470
Query: 415 LE 416
LE
Sbjct: 471 LE 472
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
++SWNSI++ + ++ + FR+M + I P V +I+P L
Sbjct: 23 SVSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFL---------- 72
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
GF F+ ++L+DMYAKCG + A +F++M D+V+W A++ G + +G
Sbjct: 73 ------GF----FVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFE 122
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
DA+SLF +M ++ ++ + V + +V++ + G +A F M
Sbjct: 123 DALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQM 166
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/514 (40%), Positives = 319/514 (62%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL+ WN +I G + G + E+L++ +M + TL++VL A +
Sbjct: 366 IPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT 425
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H A + G ++ + + LI+ Y KC + ++++F + I++ S+I Q
Sbjct: 426 TQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQC 485
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ +K F +ML ++P SS++ ACA L+ GKQ+H +I+ F ++F
Sbjct: 486 DHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG 545
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ YAKCG+I A F + +VSW+A+I G A HG+ A+ +F +M + +
Sbjct: 546 NALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIA 605
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + +VL AC+HAGL+D+A YF+SM + +GI + EHY+ + DLLGRAGKL +A E
Sbjct: 606 PNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 665
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+++M VW LL+A RVH++ EL AEK+F+++P G +V+L+NTYA+A
Sbjct: 666 LVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGM 725
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R M++ +KK PA SW+E+K++ + F+ GDKSHP I L+EL + M +
Sbjct: 726 WDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSK 785
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+ + LHDV++ +K+ LL +HSERLA+ F +I TP G IR+ KNLR+C DCH A
Sbjct: 786 AGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVA 845
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFISKIV REII+RD +RFHHF DG CSCGDYW
Sbjct: 846 FKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 136/245 (55%), Gaps = 4/245 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW++++ + N L EAL R M ++ + F L VL D G ++H
Sbjct: 69 VSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD---AGLGVQVHAV 125
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQNGLFDE 125
A+ GL ++ + ++L+ MY V+++ R+F ++A+SWN +++ V+N +
Sbjct: 126 AVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSD 185
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ F +M+ + ++P FS ++ AC L G+++H ++R G+D ++F A++L+D
Sbjct: 186 AVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVD 245
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY+K G+I +A +F K+ D+VSW A I G LHG+ A+ L QM+ G+ PN
Sbjct: 246 MYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFT 305
Query: 246 FVAVL 250
++L
Sbjct: 306 LSSIL 310
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 140/256 (54%), Gaps = 2/256 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +D+VSWN I G +G + AL ++ QM + L P+ FTLSS+L A
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 61 --KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++IHG+ I+ D++ IG +L++MYAK ++D+ ++F +P KD + WN++I+GC
Sbjct: 323 LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G E L F +M + ++++ + A L + Q+H + GF +
Sbjct: 383 HGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSH 442
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+D Y KC +R A +F++ +I+++T++I + + DAI LF +M + G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 239 VKPNSVAFVAVLTACS 254
++P+ ++L AC+
Sbjct: 503 LEPDPFVLSSLLNACA 518
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 12/285 (4%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
++S +L +A + G IH + ++ GL + L++ Y+KC + R+F
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDET 63
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P +SW+S++ N L E L FR M ++ + ++ CA LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CA--PDAGLGV 120
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALH 221
Q+H + G ++F+A++L+ MY G + AR +FD+ + VSW ++ +
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
DA+ LF +M GV+PN F V+ AC+ + ++ A ++M G
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLE-AGRKVHAMVVRTGYDKDVFT 239
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
A+ D+ + G + A + P +V W +S C +H
Sbjct: 240 ANALVDMYSKLGDIHMAALVFGKV---PKTDVVSWNAFISGCVLH 281
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/575 (36%), Positives = 322/575 (56%), Gaps = 62/575 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++ WN VI G N +A+ +M ++ +P+ FT ++ + V +G
Sbjct: 93 IPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEG 151
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR----------------------- 97
++IHG+ ++HG+ ++V I S+ I+MYA R+ED+ +
Sbjct: 152 RQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCG 211
Query: 98 -------LFCLLPVK-------------------------------DAISWNSIIAGCVQ 119
LF +PVK D ISW+S++ G +
Sbjct: 212 VLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYIS 271
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G + E L+ F+QM + +P SS++ AC+++ + G+ +H + RN + +
Sbjct: 272 AGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVL 331
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++LLDMYAKCG + + +F++M +I +W A+I G A+HG A DA+ LF ++++ +
Sbjct: 332 GTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRM 391
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + V VLTAC+HAG +DK F +M + YG+ P EHY + DLLGR+G EA
Sbjct: 392 KPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAE 451
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I++M P VW LL ACR+H N +LA +V + + ++P N G YV+LSN YA
Sbjct: 452 DLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVG 511
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
R+ D + +R M+++G+K P S +++ + F GD SHP I LK + ER++
Sbjct: 512 RFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQ 571
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
G+ PDT +VL D++EE+K+ + YHSE+LAI FG+I T G I I+KNLRVC DCH+
Sbjct: 572 MAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHS 631
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS+I REIIVRD R+HHF++G CSC D+W
Sbjct: 632 ATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 142/339 (41%), Gaps = 66/339 (19%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAK--CARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++HG +R G + + +L+ YA + + + ++F +P + WN +I GC++
Sbjct: 51 QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N + + F+ +M+I +P ++ ++ AC+ + G+Q+HG ++++G ++ I
Sbjct: 111 NNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169
Query: 180 AS------------------------------SLLDMYAKCGNIRLARCIFDKMDLHDIV 209
S +++D Y KCG + A+ +F +M + +I
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG 229
Query: 210 SWTAVIMGNALHGNAHD-------------------------------AISLFEQMEKDG 238
SW +I G A GN D A+ +F+QM+++
Sbjct: 230 SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE 289
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P +VL ACS+ G ID+ + ++ K I A+ D+ + G+L
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQG-RWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMG 348
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+E M W ++ +H E A ++ K+
Sbjct: 349 WEVFEEMKEREI-FTWNAMIGGLAIHGRAEDALELFSKL 386
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK--CGNIRLARCIFDKMDLHDIVSWT 212
+T+L QLHG ++R+G + +++ +LL YA N A +F + ++ W
Sbjct: 43 ITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWN 102
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
VI G + AI + +M D +PN + + ACS A + + + K
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK- 160
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLTLLSA---CRVHKNVE 328
+GI +A + G+L++A + ++G ++ V W T++ C V
Sbjct: 161 HGIGSDVHIKSAGIHMYASFGRLEDARKM---FYSGESDVVCWNTMIDGYLKCGVL---- 213
Query: 329 LAGKVAEKIFMIDP-NNMGAYVILSNTYAAARRWKDAASL 367
+ A+ +F P N+G++ ++ N A DA L
Sbjct: 214 ---EAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKL 250
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/523 (41%), Positives = 305/523 (58%), Gaps = 33/523 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK-GKEI 63
D+VSWN +I G ++ +MG+ + D DVI I
Sbjct: 260 DVVSWNAMIDGYVKH----------VEMGHARMVFDRMVCR----------DVISWNTMI 299
Query: 64 HGYAIRHGLDA-----------NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
+GYAI +D N+ +S++ + KC VED+ LF +P +D +SWNS
Sbjct: 300 NGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNS 359
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++A Q G +E L F QM +KP + S++ ACAHL L G LH I N
Sbjct: 360 MLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNR 419
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+ N + ++L+DMYAKCG I LA +F+ M+ D+++W +I G A+HGN +A LF+
Sbjct: 420 IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFK 479
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M++ GV+PN + FVA+L+ACSHAG++D+ + M+ YGI P EHY V DLL RA
Sbjct: 480 EMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARA 539
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G L+EA E I M P + LL CR+H N EL V +++ + P + G Y++LS
Sbjct: 540 GFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 599
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YAAA++W DA +R M+ G+ K P S IE+K + FVAGD SHP ++I E L
Sbjct: 600 NIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLN 659
Query: 413 ELLERMEQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
E+ R++ GY DT VL D+EEE K++ L HSE+LAI +G++ IRI+KNL
Sbjct: 660 EIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNL 719
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVC DCH IK ISK+ REIIVRD +RFHHFEDG+CSC D+W
Sbjct: 720 RVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 177/350 (50%), Gaps = 20/350 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I L+ + EAL + M LKPD T V+ + G +H + +
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 222
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + + I SSLI++YA + + +LF L +D +SWN++I G V++
Sbjct: 223 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARM 282
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD----NMFIASSLL 184
F +M+ + +S+++++ A + + K+L FD+ N+ +S+L
Sbjct: 283 VFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRL--------FDEMPERNLVSWNSML 330
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+ KCGN+ A +F +M D+VSW +++ A G ++A++LF+QM GVKP
Sbjct: 331 AGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEA 390
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V++L+AC+H G +DK + ++ D I + A+ D+ + GK+ A + +
Sbjct: 391 TVVSLLSACAHLGALDKGL-HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 449
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
M + W T+++ +H NV+ A ++ +++ ++PN++ ILS
Sbjct: 450 MESKDVL-AWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 498
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 123/225 (54%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN+++ A+ G EAL + QM V +KP T+ S+L A + KG
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 408
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H Y + ++ N +G++L++MYAKC ++ + ++F + KD ++WN+IIAG +
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 468
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F++M A ++P ++F +I+ AC+H + G++L C+ + G + +
Sbjct: 469 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEH 528
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA-LHGN 223
++D+ A+ G + A + M + S ++G +HGN
Sbjct: 529 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGN 573
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 311/513 (60%), Gaps = 9/513 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +I G +NG A + +M + P+ T S++L + + +IH
Sbjct: 324 NVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV----SEASFPPQIH 379
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I+ + +G++L+ Y+K E++ +F ++ KD +SW++++ Q G +
Sbjct: 380 AQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCN 439
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIASSL 183
F +M + +KP + SS + ACA + LG+Q H I++ D + ++S+L
Sbjct: 440 GATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSAL 499
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MYA+ G+I A+C+F++ D++SW +++ G A HG + A+ +F QME +G+ +
Sbjct: 500 VSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDG 559
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ F++V+ C+HAGL+++ YF+ M +DYGI P+ +HYA + DL RAGKL E I
Sbjct: 560 LTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIE 619
Query: 304 NMH--AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
M AGPT +W LL ACRVHKNVEL AEK+ ++P + YV+LSN Y+AA +W
Sbjct: 620 GMPFPAGPT--IWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKW 677
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
K+ +R M K ++K CSWI++KNK + F+A DKSHP +I L+ + +++QE
Sbjct: 678 KEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQE 737
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT V HDV E+QK+ +L HSERLA+ FG+I TP + I KNLRV GD HT +
Sbjct: 738 GYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVM 797
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S+I REI++RD RFHHF+ G CSCGD+W
Sbjct: 798 KMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 144/248 (58%), Gaps = 1/248 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++V+W +++ G + G+ + +++ +M + P+ FT SSVL + A V G+ +H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+I+ G + V + +SL+NMYAKC VE++ +FC + +D +SWN+++AG V NG
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F + ++S+++ CA+L L L +QLH ++++GF + ++L+
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALM 300
Query: 185 DMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
D Y K G + A +F M ++VSWTA+I G +G+ A +LF +M +DGV PN
Sbjct: 301 DAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPND 360
Query: 244 VAFVAVLT 251
+ + +LT
Sbjct: 361 LTYSTILT 368
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 155/317 (48%), Gaps = 4/317 (1%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLL 102
L ++ I D + GK++H +R G D ++ +G+SL++MY V D ++F +
Sbjct: 58 LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM 117
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
++ ++W S++ G +Q G+ + + F +M + P +FSS++ A + LG+
Sbjct: 118 LKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQ 177
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
+H I+ G +F+ +SL++MYAKCG + AR +F +M+ D+VSW ++ G L+G
Sbjct: 178 HVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNG 237
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY 282
+A+ LF + V+ C++ + A +S+ K +G
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLK-HGFHSYGNVM 296
Query: 283 AAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--I 340
A+ D +AG+L +A + M W ++ C + ++ LA + ++ +
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356
Query: 341 DPNNMGAYVILSNTYAA 357
PN++ IL+ + A+
Sbjct: 357 APNDLTYSTILTVSEAS 373
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 147/299 (49%), Gaps = 5/299 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWNT++ GL NG EAL + + T S+V+ + A+ +
Sbjct: 218 METRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLA 277
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCVQ 119
+++H ++HG + + ++L++ Y K +++ + +F L+ ++ +SW ++I GC+Q
Sbjct: 278 RQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQ 337
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG F +M + P +++S+I+ ++ Q+H +I+ ++ +
Sbjct: 338 NGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTV 393
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+K + A IF +D D+VSW+A++ A G+ + A + F +M G+
Sbjct: 394 GTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGL 453
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
KPN + + AC+ F++++ + + +A+ + R G ++ A
Sbjct: 454 KPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/512 (38%), Positives = 315/512 (61%), Gaps = 5/512 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+++WNT+I G A+ G +AL + ++MG + KP+ T +L + D+ +G+ IH
Sbjct: 228 DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
G ++++ IG+ L+NMY KC+ +E++ ++F + +D I+WN +I VQ G
Sbjct: 288 RKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQA 347
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ L F+QM + + P ++ S+++ ACA L GK +H I ++ + +SL
Sbjct: 348 KDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSL 407
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++MY +CG++ +F + +VSW+ +I A HG++ + F ++ ++G+ +
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V V+ L+ACSH G++ + F SM D+G+AP + H+ + DLL RAG+L+ A I
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYV-ILSNTYAAARRWK 362
+M P W +LLS C++H + + A +VA+K+F ++ + + V +LSN YA A RW
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD 587
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
D R + +K P CS+IE+ + + FVAGDKSHP I +K L ++M+ G
Sbjct: 588 DVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVPD + VLH+V+EE+K+ +L YHSE+LAI +G+I TP GT + I+KNLR C DCH A K
Sbjct: 645 YVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAK 704
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FIS+IV R+I+VRD++RFHHFE+G CSC DYW
Sbjct: 705 FISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 152/261 (58%), Gaps = 4/261 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN---LKPDSFTLSSVLPIFADYVDV 57
M LV+WN +I G +RNG + AL I + M + + +KPD+ T SS L D+
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G+EI + G ++ + ++LINMY+KC +E + ++F L +D I+WN++I+G
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ G + L+ F++M KP V+F ++ AC +L L G+ +H + +G++ ++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299
Query: 178 FIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
I + LL+MY KC ++ AR +F++M D+++W +I+ +G A DA+ +F+QM+
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 237 DGVKPNSVAFVAVLTACSHAG 257
+ V PN + VL+AC+ G
Sbjct: 360 ENVAPNEITLSNVLSACAVLG 380
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 146/253 (57%), Gaps = 4/253 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
VSW ++ ARNG Y EAL R+M L+PD + + + D+ +G+ +H
Sbjct: 24 VSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAM 83
Query: 67 AIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
+ L + ++ +G++LI MYA+C +E + + F + K ++WN++IAG +NG
Sbjct: 84 ILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRG 143
Query: 126 GLKFFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
LK ++ M+ +KP ++FSS + AC + + G+++ + +G+ + + ++
Sbjct: 144 ALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNA 203
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++MY+KCG++ AR +FD++ D+++W +I G A G A A+ LF++M + KPN
Sbjct: 204 LINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPN 263
Query: 243 SVAFVAVLTACSH 255
V F+ +LTAC++
Sbjct: 264 VVTFIGLLTACTN 276
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY KC V D+ +F + +++SW I+A +NG + E L ++R+M++ ++P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARCIFDKM 203
F + C+ L G+ LH I+ + ++ + ++L+ MYA+C ++ LAR FD+M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQM---EKDGVKPNSVAFVAVLTACSHAGLID 260
+V+W A+I G + +G+ A+ +++ M +G+KP+++ F + L AC+ G I
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + T G A A+ ++ + G L+ A + +
Sbjct: 181 QGRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 6/243 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+++WN +IV + G ++AL+I +QM N+ P+ TLS+VL A +G
Sbjct: 326 MRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H A+V + +SL+NMY +C ++D+ +F + K +SW+++IA Q+
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G GL+ F ++L + V+ S + AC+H L G Q ++ + G +
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRH 505
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGN----AHDAISLFEQM 234
++D+ ++ G + A + M L D V+WT+++ G LH + A A LFE
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565
Query: 235 EKD 237
+D
Sbjct: 566 SED 568
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 312/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+WN V+ +G E + + P+ + + A + + G
Sbjct: 73 MPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLG 132
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HG+ ++ G + +V + +S+++ Y KC + +F + V++++SW S++A QN
Sbjct: 133 EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQN 192
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + + +P SS + CA L LHLG+ LH +R+ D N+F+A
Sbjct: 193 GAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVA 252
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-V 239
S+L+DMY KCG + A IF + ++V+W A+I G A G+A +A+ +F+ M + G
Sbjct: 253 SALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGET 312
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN + V V+T+CS GL + F +M + +GI P EHYA V DLLGRAG ++AY
Sbjct: 313 APNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAY 372
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I M P+ +VW LL AC++H EL AEK+F +DP + G +V+LSN +A+A
Sbjct: 373 EVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAG 432
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW +A +R M+N G+KK P CSW+ KN + F A D H Y+ I L +L ++M+
Sbjct: 433 RWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQ 492
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY+PDT+ L+D+EEE+K++ ++ HSE+LA+ FG+IC P G IRI+KNLR+C DCH
Sbjct: 493 AAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHR 552
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS IV REIIVRDN+RFHHF+ +CSCGDYW
Sbjct: 553 AFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 13/276 (4%)
Query: 32 MGNVNLKPDSFTLSSVLPIFADYVD-VIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKC 89
M + L+P+ FT S A G +IH AIR G L + + + ++MY K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
R++ + LF +P ++ ++WN+++ V +G E ++ + + A P VS +
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
ACA L LG+Q HG +++ GF+ ++ + +S++D Y KC AR +FD M + + V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS-----HAGLIDKAWS 264
SW +++ A +G +A + + + G +P + LT C+ H G A +
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + + +A +A+ D+ G+ G +++A +
Sbjct: 241 VRSCIDANIFVA------SALVDMYGKCGCVEDAEQ 270
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 17/207 (8%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLH-LGKQLHGCIIRNGF-DDNMFIASSLLDMYAKC 190
ML ++P +F S A A +G Q+H IR G+ + F++ + LDMY K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G ++LAR +F +M ++V+W AV+ L G + I + + + G PN V+ A
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 251 TACSHA----------GLIDKAW-----SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
AC+ A G + K S NSM YG AV D +G +
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACR 322
+ G E + L A R
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARR 207
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/517 (39%), Positives = 321/517 (62%), Gaps = 7/517 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSWN+++V ++ +AL + +M L D FTL+SVL F + D++ G + H
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFH 263
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAG-CVQNGL 122
I+ G N +GS LI++Y+KC + D ++F + D + WN++I+G + L
Sbjct: 264 AKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDL 323
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFIAS 181
DE L+ FRQ+ + +P S ++ AC+++++ G+Q+HG ++ N + + +
Sbjct: 324 SDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNN 383
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MY+KCGN+R A+ +FD M H+ VS+ ++I G A HG ++ LF++M + G P
Sbjct: 384 ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTP 443
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
++ F++VL AC+H G ++ YFN M + +GI P H++ + DLLGRAGKL EA
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I + P W LL ACR+H NVELA K A ++ +DP N YV+L+N Y+ R
Sbjct: 504 IETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRL 563
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DAAS+R MR++G+KK P CSWIEV + + FVA D HP +I E L+E++ ++++
Sbjct: 564 QDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKV 623
Query: 422 GYVPDTKEVL----HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
GY P+ + L V + +++ L +HSE+LA+ FG++ T +G I + KNLR+C DC
Sbjct: 624 GYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDC 683
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H AIK+IS++V+REI VRD+ RFH F+DG+CSCG YW
Sbjct: 684 HNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 145/258 (56%), Gaps = 5/258 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+NT+I AR G + A + +M L D FTLS ++ V +I+
Sbjct: 100 MPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIR- 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
++H ++ GLD+ V +G++LI Y+K ++++ R+F L +D +SWNS++ +Q
Sbjct: 159 -QLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + L+ + +M + + + +S++ A ++ L G Q H +I++G+ N +
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV 277
Query: 180 ASSLLDMYAKCGNIRL-ARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKD 237
S L+D+Y+KCG L R +FD++ D+V W +I G +L+ + D A+ F Q++
Sbjct: 278 GSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVV 337
Query: 238 GVKPNSVAFVAVLTACSH 255
G +P+ + V V++ACS+
Sbjct: 338 GHRPDDCSLVCVISACSN 355
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
H D NV ++LI+ YAK + VE +H+LF +P D++S+N++IA + G +
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F +M A + + S I+ AC + L +QLH + G D + + ++L+ Y+K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSK 185
Query: 190 CGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
G ++ AR IF + + D VSW ++++ H A+ L+ +M G+ + +
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG----KLQEAYEFISN 304
VLTA ++ + + + K G + + + DL + G ++ ++ ISN
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304
Query: 305 MHAGPTENVWLTLLSACRVHKNV 327
P +W T++S +++++
Sbjct: 305 ----PDLVLWNTMISGYSLYEDL 323
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+F + C L GK LH I++ + ++++ L +Y+KC + AR +FD
Sbjct: 10 NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++ S+ +I A A LF++M +P+SV++ ++ A + G A+
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAF 125
Query: 264 SYFNSMTKDY 273
F M + +
Sbjct: 126 QLFLEMREAF 135
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N++I G A++G+ ++L++ ++M + P + T SVL A V G
Sbjct: 405 MPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDG 464
Query: 61 K-EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSIIAGCV 118
K + + G++ S +I++ + ++ ++ RL +P W++++ C
Sbjct: 465 KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACR 524
Query: 119 QNGLFDEGLKFFRQML 134
+G + +K ++L
Sbjct: 525 IHGNVELAIKAANRLL 540
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/515 (40%), Positives = 310/515 (60%), Gaps = 8/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWNT++ GL++NG EEA + R M N + + ++++ A D+
Sbjct: 98 MPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARN----AVSWNAMVAARASSGDMGAA 153
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + A + + +++++ Y V+ + F +PV++ +SWN+++AG V+N
Sbjct: 154 ENLFRNAPEK---TDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKN 210
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ L+ F+ M+ A ++P + SS++ C++L+ L G+Q+H ++ ++ +
Sbjct: 211 SRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITV 270
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY KCG++ A +FD+M DIV+W A+I G A HG AI LFE+M+ +GV
Sbjct: 271 GTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGV 330
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + +AVLTAC H GL D F +M + Y I P +HY+ + DLL RAG L+ A
Sbjct: 331 VPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAV 390
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M P + + TLL+ACRV+KN+E A A K+ DP N GAYV L+N YA A
Sbjct: 391 NMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVAN 450
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D + +R +M++ + KTP SW+E+K + F + D+ HP I++ L L + M+
Sbjct: 451 RWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMK 510
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY PD LHDVEE K +L HSE+LAI FG+I T G T+RI KNLR+CGDCH
Sbjct: 511 AMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHN 570
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI REII+RD +RFHHF G CSCGDYW
Sbjct: 571 AAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 16/262 (6%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++L++ + C ++ + R+F +PV+D SWN++++G +NG +E FR M
Sbjct: 76 NTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNA- 134
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASSLLDMYAKCGNIRLARC 198
VS+++++ A A + + L RN + + + ++++ Y GN++ A
Sbjct: 135 ---VSWNAMVAARASSGDMGAAENL----FRNAPEKTDAILWTAMVSGYMDTGNVQKAME 187
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAG 257
F M + ++VSW AV+ G + A DA+ +F+ M +D V+PN +VL CS+
Sbjct: 188 YFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLS 247
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WL 315
+ K + S ++ + + G L +A + MH T+++ W
Sbjct: 248 ALGFGRQVHQWCMK-LPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMH---TKDIVAWN 303
Query: 316 TLLSACRVHKNVELAGKVAEKI 337
++S H A K+ EK+
Sbjct: 304 AMISGYAQHGGGRKAIKLFEKM 325
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 303/515 (58%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP VSW +I G EA+ + R+ ++PDSFT VL A D+ G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 61 KEIHGYAIRH-GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + A + G+ +V + ++ +++Y KC +E + +F + +DA++W +++ G
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L F M + KP + + AC L L LG+Q G + + N +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG+ A +F +M DI+ W A+I+G + G+ A +L QM+K GV
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
K N F+ +L +C+H GL++ YF++MT Y I+P EHY + DL RAG L+EA+
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M VW LL C++H+N +LA +++ ++P N G YV+LSN Y+ +
Sbjct: 301 QLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSG 360
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+DAA LR+ M+ KG++K PA SW+E+ K + F GD SHP +I L EL M+
Sbjct: 361 RWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMK 420
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY P T+ V+ DVE E+K+N L +HSE++AI F +I T G TIR+ KNLRVC DCH+
Sbjct: 421 AMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHS 480
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS+I REI+VRDN+RFH F DG CSC DYW
Sbjct: 481 AIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/501 (40%), Positives = 311/501 (62%), Gaps = 7/501 (1%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
LARN ++ + +M + ++ P+ FT ++ + +GK+IH + ++ G A+
Sbjct: 74 LARNCIF-----MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGAD 128
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSIIAGCVQNGLFDEGLKFFRQM 133
++LI+MY +E + R+F +P +D ++SWN++IA VQ+ E F +M
Sbjct: 129 GFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRM 188
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ + +S++ AC L L GK +HG I ++G + + +A++++DMY KCG +
Sbjct: 189 RLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCL 248
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A +F+++ I SW +I G A+HG AI LF++ME++ V P+ + FV VL+AC
Sbjct: 249 EKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSAC 308
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
+H+GL+++ YF MT+ G+ P EH+ + DLLGRAG L+EA + I+ M P V
Sbjct: 309 AHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGV 368
Query: 314 WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRN 373
L+ ACR+H N EL ++ +K+ ++P+N G YV+L+N YA+A RW+D A +R M +
Sbjct: 369 LGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMND 428
Query: 374 KGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHD 433
+G+KK P S IE ++ F+AG ++HP I L E+LE + GYVPDT VLHD
Sbjct: 429 RGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHD 488
Query: 434 VEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREII 493
++EE+K+N LYYHSE+LAI FG++ T G T+RI KNLR+C DCH A K ISK+ REII
Sbjct: 489 IDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREII 548
Query: 494 VRDNSRFHHFEDGKCSCGDYW 514
+RD +RFHHF G CSC DYW
Sbjct: 549 IRDRNRFHHFRMGGCSCKDYW 569
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 14/288 (4%)
Query: 1 MPVSDL--VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP D VSWN +I ++ EA + +M N+ D F +S+L +
Sbjct: 155 MPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALE 214
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IHGY + G++ + + +++I+MY KC +E + +F LP K SWN +I G
Sbjct: 215 QGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA 274
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNM 177
+G + ++ F++M + P ++F +++ ACAH + GK + G M
Sbjct: 275 MHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 334
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+ + G + AR + ++M ++ D A++ +HGN L EQ+ K
Sbjct: 335 EHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNT----ELGEQIGK 390
Query: 237 DGVK---PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI--APSF 279
++ NS +V + + AG + + + D G+ AP F
Sbjct: 391 KVIELEPHNSGRYVLLANLYASAGRWEDV-AKVRKLMNDRGVKKAPGF 437
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/496 (40%), Positives = 315/496 (63%), Gaps = 1/496 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N VI ++ YEE+LN+ R+M + +F +++L I A+ + G
Sbjct: 305 MPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVG 364
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H AI D+ + +G+SL++MYAKC +++ +F L + +SW ++I+G VQ
Sbjct: 365 RQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQK 424
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL GLK F +M A ++ +F++++ A A +L LGKQLH IIR+G +N+F
Sbjct: 425 GLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSG 484
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAKCG+I+ A +F++M + VSW A+I A +G+ AI F +M + G++
Sbjct: 485 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQ 544
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+ + VL ACSH G +++ +F +M+ YGI P +HYA + DLLGR G+ EA +
Sbjct: 545 PDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 604
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP-NNMGAYVILSNTYAAAR 359
+ M P E +W ++L+ACR++KN LA + AE++F ++ + AYV +SN YAAA
Sbjct: 605 LMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAG 664
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ ++ MR +G+KK PA SW+EV +K + F + D++HP I + + EL +E
Sbjct: 665 KWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIE 724
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY PDT V+ D++E+ K L YHSERLA+ F +I TP+G I ++KNLR C DCH
Sbjct: 725 REGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHA 784
Query: 480 AIKFISKIVQREIIVR 495
AIK ISKIV+R I +
Sbjct: 785 AIKLISKIVKRVITTQ 800
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V++NT+I G ++GLY EA+++ +M KP FT S VL D G+++H
Sbjct: 208 DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLH 267
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G + +G+ +++ Y+K RV ++ LF +P D +S+N +I+ Q ++
Sbjct: 268 GLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYE 327
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L FR+M R+ F++++ A+L++L +G+Q+H I D + + +SL+
Sbjct: 328 ESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLV 387
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKC A IF + VSWTA+I G G + LF +M ++ +
Sbjct: 388 DMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQS 447
Query: 245 AFVAVLTACSHAG--LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
F VL A + L+ K F + + + F + + D+ + G +++A +
Sbjct: 448 TFATVLKASAGFASLLLGKQLHAF--IIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVF 504
Query: 303 SNMHAGPTENV--WLTLLSA 320
M P N W L+SA
Sbjct: 505 EEM---PDRNAVSWNALISA 521
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +V+W ++ A N ++EA + RQM PD T +++LP D V
Sbjct: 101 MPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAV 160
Query: 61 KEIHGYAIRHGLDANV--CIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++H +A++ G D N+ + + L+ Y + R++ + LF + KD++++N++I G
Sbjct: 161 GQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYE 220
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++GL+ E + F +M + KP +FS ++ A L LG+QLHG + GF +
Sbjct: 221 KDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDAS 280
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + +L Y+K + R +F++M D VS+ VI + ++++LF +M+ G
Sbjct: 281 VGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMG 340
Query: 239 VKPNSVAFVAVLT 251
+ F +L+
Sbjct: 341 FDRRNFPFATMLS 353
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N +++I+ Y K + + LF +P + ++W ++ N FDE K FRQM
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA--SSLLDMYAKCGN 192
+ P +V+F++++P C + Q+H ++ GFD N+F+ + LL Y +
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ LA +F+++ D V++ +I G G +AI LF +M + G KP+ F VL A
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH--DAISLFEQ 233
N ++++ Y K G++ AR +FD M +V+WT ++MG GN H +A LF Q
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWT-ILMG-WYAGNNHFDEAFKLFRQ 131
Query: 234 MEKDGVKPNSVAFVAVLTACSHA 256
M + P+ V F +L C+ A
Sbjct: 132 MCRSCTLPDYVTFTTLLPGCNDA 154
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 302/492 (61%)
Query: 23 EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSL 82
+EA+ ++ G S + VL A +V+ G ++H A++ L+ NV +GS+L
Sbjct: 165 DEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSAL 224
Query: 83 INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
++MY KC +++R+F +LP K+ +SW +I+ QN LF++ L+ F M + ++P
Sbjct: 225 VDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNE 284
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
+++ + +CA L TL G L C ++ G + + ++L++MY+K G++ AR +F
Sbjct: 285 FTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLS 344
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M D+VSW ++I+G A HG A +A+ F M P+ V F+ VL+AC+ GL+D+
Sbjct: 345 MPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 404
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
+ Y N M K+ G+ P EHY + LL R G+L EA FI + G W +LLS+C+
Sbjct: 405 FYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQ 464
Query: 323 VHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPAC 382
V++N L +VAE+IF + P ++G YV+LSN YA A RW +R MR G++K P
Sbjct: 465 VYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGV 524
Query: 383 SWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNL 442
SWI+V ++ + F + DK HP+ +I + L+EL+++++ GYVP+ LHDVE+EQK+
Sbjct: 525 SWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEH 584
Query: 443 LYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHH 502
L YHSE+LA+ FG+I TP G IRI+KN+R+C DCH AIK IS R I+VRD RFH
Sbjct: 585 LMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHC 644
Query: 503 FEDGKCSCGDYW 514
EDG CSC DYW
Sbjct: 645 IEDGVCSCDDYW 656
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSW ++ +N L+E+AL + M ++P+ FT + L A + G
Sbjct: 244 LPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNG 303
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ ++ G + + ++L+NMY+K VED+ R+F +P +D +SWNSII G +
Sbjct: 304 NALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHH 363
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ F ML A+ P +V+F ++ ACA L + G +++ G
Sbjct: 364 GRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEH 423
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++ + + G + A R I D+V+W +++ ++ N + EQ+ +
Sbjct: 424 YTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQ-- 481
Query: 239 VKPNSVAFVAVLT 251
+KP V +L+
Sbjct: 482 LKPKDVGTYVLLS 494
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 39/307 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS N ++ G A +G + +AL ++R + + + LSS + A G
Sbjct: 76 MPSRNPVSGNLLMSGYASSGRHRDALALLRV---ADFGLNEYVLSSAVAATAHVRSYDMG 132
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ HGYAI+ GL + + S++++MY +CA +
Sbjct: 133 RQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHM---------------------------- 164
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
DE +K+ ++ ++ CA + LG Q+H ++ + N+++
Sbjct: 165 ---DEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVG 221
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY KC A +F+ + +IVSWTA++ + DA+ LF ME +GV+
Sbjct: 222 SALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVR 281
Query: 241 PNSVAFVAVLTACSHAGLID--KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN + L +C+ + A T +G+ P A+ ++ ++G +++A
Sbjct: 282 PNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDA 338
Query: 299 YEFISNM 305
+M
Sbjct: 339 RRVFLSM 345
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 50/264 (18%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H +R +V ++LI +Y KC R+ + ++F +P ++ +S N +++G
Sbjct: 35 GKAVHARVVR-AARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L R +A SS + A AH+ + +G+Q HG I+ G ++ ++
Sbjct: 94 SGRHRDALALLR---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150
Query: 180 ASSLLDMYAKCGNI---------------RLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
S++L MY +C ++ + C+ ++ L S V++G+ +H A
Sbjct: 151 CSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRV-LGHCASTKEVVLGSQVHTQA 209
Query: 225 -------------------------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
H+A +FE + + N V++ A++TA + L
Sbjct: 210 LKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK----NIVSWTAIMTAYTQNELF 265
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYA 283
+ A F M + G+ P+ YA
Sbjct: 266 EDALQLFLDMEME-GVRPNEFTYA 288
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 158 LHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L LGK +H ++R FD + ++L+ +Y KCG + LAR +FD M + VS ++
Sbjct: 32 LSLGKAVHARVVRAARFDVVQY--NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 217 GNALHGNAHDAISLF 231
G A G DA++L
Sbjct: 90 GYASSGRHRDALALL 104
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 316/546 (57%), Gaps = 33/546 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKG 60
P D+ +++++ ++ + E AL I+R M + + L PD F +SSV +FA G
Sbjct: 65 PRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLG 124
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + + + + + SSL++MY KC +D ++F + K+++ W ++++G N
Sbjct: 125 RQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASN 184
Query: 121 GLFDEGLKFFRQM--------------------------LIAKIKPRHVS------FSSI 148
G +E L+ FR M L +++ V S +
Sbjct: 185 GRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIV 244
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ A L LG+QLHG +R GF NM + ++L+DMY+KC +I AR +F+ + D+
Sbjct: 245 IGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDV 304
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWT +++G A HG A +A++L+++M G KPN V FV ++ ACSHAGL+ K F S
Sbjct: 305 ISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFES 364
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M +YGI P +HY DLL R+G L EA E ++ M P E W LLSAC +K+ E
Sbjct: 365 MKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAE 424
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+ ++++K+ + P + Y++LSN YA +W A +R M ++K P SWIE
Sbjct: 425 MCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAG 484
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
+ F AG+ I L+E++ M + GYVPDT V+HD+EE +K++ L+ HSE
Sbjct: 485 REFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEKEHHLFLHSE 544
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
RLA+ FG+I +P G+ IR++KNLRVC DCHT +K IS+I R+I+VRD+SRFHHFE GKC
Sbjct: 545 RLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSRFHHFEGGKC 604
Query: 509 SCGDYW 514
SC ++W
Sbjct: 605 SCSEFW 610
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/542 (40%), Positives = 306/542 (56%), Gaps = 37/542 (6%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE----IHG 65
+ +I A +G + AL + + L P TL S+L A V + +H
Sbjct: 57 DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116
Query: 66 YAIRHGL----------------------DANVCIGSS----------LINMYAKCARVE 93
+A+R GL DA++ + +S LI +A+ RV
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
D+ LF +P ++A+SW++++ G VQ G E L F QM ++P ++ ACA
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L GK +HG + N +F+ ++L+DMYAKCG ++L +F+ M ++++WT
Sbjct: 237 QLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTT 296
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A+HG D+++LF QME GVKP+ +AF+ L AC+H GL+DK FNSM +Y
Sbjct: 297 MIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNY 356
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P EHY + DLL R G L EA + + M P +W L++ CR HKNVELA V
Sbjct: 357 GIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYV 416
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
+ ++P+ GAYV+L N Y+A+ R A +R MR KG++KTP CS +E+K +
Sbjct: 417 IKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQ 476
Query: 394 FVAGDKSHPFYHRINEALKELLERME-QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F+ GD SHP I E+ R+ +EGYVPD KEVL D+EEE+ ++ L HSE+LAI
Sbjct: 477 FIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAI 536
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
F +I T D IRI+KNLRVC DCH K ISK+ REIIVRD +RFH F+DG CSC D
Sbjct: 537 AFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKD 596
Query: 513 YW 514
YW
Sbjct: 597 YW 598
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW+ ++ G + G EAL + QM ++PD L VL A + +G
Sbjct: 185 MPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQG 244
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +HGY + + V +G++L++MYAKC V+ +F + K+ ++W ++I G +
Sbjct: 245 KWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMH 304
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + L F QM + +KP ++F + AC H + G++L ++ N G +
Sbjct: 305 GRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEH 364
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ A+ G + AR + +KM + D + W A++ G H N
Sbjct: 365 YGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKN 409
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 318/565 (56%), Gaps = 51/565 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNG---LYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVD 56
MP + WNT++ LA L EAL + M + +KP+ FT SVL A
Sbjct: 78 MPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASR 137
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL--------------- 101
+ +GK+IHG ++ G + + S+L+ MY CA +ED++ LFC
Sbjct: 138 LREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDK 197
Query: 102 --------------------------------LPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+P + +SWN +I+G QNG F E +
Sbjct: 198 RKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINL 257
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M + I P +V+ S++PA A + L LGK +H +N + + + S+L+DMY+K
Sbjct: 258 FQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSK 317
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CG+I A +F+ + + ++W+A+I A+HG A DAI F M K GV PN VA++ +
Sbjct: 318 CGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGI 377
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L+ACSHAGL+++ S+F+ M K G+ P EHY + DLLGRAG L+EA E I NM P
Sbjct: 378 LSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEP 437
Query: 310 TENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRV 369
+ +W LL AC++HKN+++ +VAE + + P++ G+YV LSN YA+ W+ A +R+
Sbjct: 438 DDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRL 497
Query: 370 FMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKE 429
M+ ++K P CSWIE+ + F+ D SH I L E+ ++ GY P+T E
Sbjct: 498 KMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLE 557
Query: 430 VLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQ 489
V + +E+++ L YHSE++A+ FG+I T ++I+KNLR+C DCH ++K IS I +
Sbjct: 558 VFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYK 617
Query: 490 REIIVRDNSRFHHFEDGKCSCGDYW 514
R+IIVRD RFH FE G CSC DYW
Sbjct: 618 RQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 150/354 (42%), Gaps = 72/354 (20%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR-LFCLLPVKDAISWNSIIAGCVQ 119
K++H I+ G + + +I A +R D R +F +P + WN+I+ +
Sbjct: 36 KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAE 95
Query: 120 NG---LFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
L E L F ML ++KP +F S++ ACA + L GKQ+HG I++ GF +
Sbjct: 96 TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHE 155
Query: 176 NMFIASSLLDMYAKC--------------------------------------------- 190
+ F+ S+L+ MY C
Sbjct: 156 DEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQV 215
Query: 191 --GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
G+I+ A+ +FD+M +VSW +I G A +G+ +AI+LF++M+ + PN V V+
Sbjct: 216 RLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVS 275
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
VL A + G ++ W + + I +A+ D+ + G + EA + +
Sbjct: 276 VLPAIARIGALELGKWIHLYAGKNKIEIDDVLG--SALVDMYSKCGSIDEALQVFETL-- 331
Query: 308 GPTEN--VWLTLLSACRVHKNVE-------LAGKVAEKIFMIDPNNMGAYVILS 352
P N W ++ A +H E L GK + PN++ ILS
Sbjct: 332 -PKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG-----VTPNDVAYIGILS 379
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 326/532 (61%), Gaps = 20/532 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA-DYVDVI--- 58
+ D++SWN+++ G +N +I ++M ++PDS +L+ + + D +I
Sbjct: 390 LRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFR 449
Query: 59 KGKEIHGYAIRHGLDANVC--IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+GKEIHGY +R V + ++++ MYAK R+ D+ ++F + +D+ SWN+++ G
Sbjct: 450 RGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDG 509
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFD 174
+N F++ L F +L HVS S ++ +C L +L LGKQ H + + NG D
Sbjct: 510 YSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQD 569
Query: 175 ----DNMF-IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
D++ I ++L+ MY+KCG+I+ A +F KM+ D+ SWTA+I G A HG A +A+
Sbjct: 570 CPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQ 629
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
LFE+M+ DG+KPN V F+A+L AC+H GL+ + YF+SM DYG++PS EHYA + DL
Sbjct: 630 LFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLF 689
Query: 290 GRAGKLQEAYEFIS------NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
GR+G+ A + + N+W LL AC K ++L + A KI ++P
Sbjct: 690 GRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPE 749
Query: 344 NMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPF 403
+ Y++L+N YA++ W+DA +R MR+KG++K CSWI+ N+ + FVAGD HP
Sbjct: 750 DEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQ 809
Query: 404 YHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII-CTPDG 462
I E L +L + GYVP T+ VLHDV+E +K+ +L HSE+LA+ FG++ C
Sbjct: 810 RKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGN 869
Query: 463 TTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IR++KNLRVC DCH+ +KF S + +REI++RD+ RFH F DG CSCGDYW
Sbjct: 870 GVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 150/259 (57%), Gaps = 6/259 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P D++SW+ +I +R G + +A + ++M L+P+ F+L+S+L + ++
Sbjct: 81 FPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLC 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
+++HG++IR G + I ++ I MY++C +ED+ R+F L D + WNSIIA +
Sbjct: 141 RQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYI 200
Query: 119 QNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G + E L+ F +M+ + + P ++++S++ AC G +HG II+ G +
Sbjct: 201 FHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN 260
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK- 236
+ +SL+ Y KCGN++ A +F+++ D+VSW A+I N G +A+ LF +M K
Sbjct: 261 -LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKV 319
Query: 237 -DGVKPNSVAFVAVLTACS 254
V+PN V F+++L+A S
Sbjct: 320 EPPVQPNRVTFLSLLSAVS 338
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 141/260 (54%), Gaps = 6/260 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEI 63
D++ WN++I +G + E L + +M +V + P T +SV+ + G +
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG I+ GL+A + +SL+ Y KC ++ + +LF + KD +SWN++IA Q G
Sbjct: 248 HGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEG 306
Query: 124 DEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ L FR+ML + ++P V+F S++ A + L+ L G+++H I R + + I +
Sbjct: 307 ENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITN 366
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ Y+KC + AR IF+++ L DI+SW +++ G + +F++M G++P
Sbjct: 367 SLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEP 426
Query: 242 NSVAFVAVLTACSH--AGLI 259
+S + + A S +GLI
Sbjct: 427 DSHSLTIIFNAASRDSSGLI 446
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG++ + + C S + ++ R++ + +LF P +D ISW+++IA + G F
Sbjct: 45 HGFSSQFIFRCSAC--SKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNF 102
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+ F++M+ ++P S +S++ + L +QLHG IR GF + I ++
Sbjct: 103 AQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAW 162
Query: 184 LDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VK 240
+ MY++CG + A+ +FD+ L DI+ W ++I HG + + LF +M G V
Sbjct: 163 ITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVA 222
Query: 241 PNSVAFVAVLTACSHAG-----------LID---KAWSYFNSMTKDYGIAPSFEHYAAVA 286
P + + +V+ AC +G +I +A + +NS+ YG + +H + +
Sbjct: 223 PTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLF 282
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTEN 312
+ + R + +N G EN
Sbjct: 283 ERISRKDVVSWNAMIAANEQRGEGEN 308
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 307/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
MP D V+W +I G A+NG E A+ R M L D SVL D
Sbjct: 183 MPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWL 242
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
K IH + G + V + ++LI+MYAK VE + R+ + P + +S S+I G +
Sbjct: 243 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 302
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ +E L + ++ ++P +FSS++ CA L G QLH +I+ + F
Sbjct: 303 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF 362
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+DMY KCG I L+ +F++++ ++W AVI A HG+ +AI F++M G
Sbjct: 363 VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG 422
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++PN +AFV++LTACSHAGL+D+ YF SM + +GI P EHY+ + D GRAG+L EA
Sbjct: 423 IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEA 482
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FIS M P W +LL ACR+ + EL A+ + ++P N G +V LS YA+
Sbjct: 483 YKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASL 542
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+D ++R MR+ +KK P SW++ K + F + D SHP I E L+EL R+
Sbjct: 543 GQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRI 602
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++EGY+PDT + ++E+ K+ +L YHSER+A+ F +I P I + KNLR+C DCH
Sbjct: 603 KEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCH 662
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFI K+ +R+IIVRDNSRFHHF +G+CSCGDYW
Sbjct: 663 TAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 181/358 (50%), Gaps = 10/358 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW T++ GL++N ++ +AL M + P F LSS A + G
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 141
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +R G D + + S+L +MY+KC + ++ R+F +P KDA++W ++I G +N
Sbjct: 142 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 201
Query: 121 GLFDEGLKFFRQMLIAKI--KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + + FR M + +HV F S++ A L L K +H C+ + GF+ +
Sbjct: 202 GSLEAAVLSFRDMKREGLVGADQHV-FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 260
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++L+DMYAK ++ A + K+D ++VS T++I G +A+ ++ ++ +
Sbjct: 261 VRNALIDMYAKSMDVESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 319
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV+PN F +++ C+ L+++ + K I SF + + D+ G+ G +
Sbjct: 320 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVG-STLVDMYGKCGLIS 378
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ + + + T+ W +++ H + A + +++ I PN++ +L+
Sbjct: 379 LSMQLFNEIEY-RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 435
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 39 PDSFT---LSSVLPIFADYVDVIKGKEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVED 94
PD+ T L+S+L D+ +G+ +H + G A + + + LI MY+ CA +
Sbjct: 15 PDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS 74
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ RLF +P ++A+SW ++++G QN + + L F M A + P + SS A A
Sbjct: 75 ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 134
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L G QLH +R GFD +F+AS+L DMY+KCG + A +FD+M D V+WTA+
Sbjct: 135 LGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAM 194
Query: 215 IMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLIDKAW 263
I G A +G+ A+ F M+++G V + F +VL+A +G + W
Sbjct: 195 IDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGW 241
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 320/541 (59%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LV +NT++ + + L I+ +M +PD T+ S + A D+ GK H
Sbjct: 296 NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 355
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG--- 121
Y +R+GL+ I +++I+MY KC + E + ++F +P K ++WNS+IAG V++G
Sbjct: 356 AYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDME 415
Query: 122 ----------------------------LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F+E ++ FR+M I V+ I AC
Sbjct: 416 LAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACG 475
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+L L L K + I +N ++ + ++L+DM+++CG+ A +F +M+ D+ +WTA
Sbjct: 476 YLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTA 535
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
I A+ GN AI LF +M + VKP+ V FVA+LTACSH G +D+ F SM K +
Sbjct: 536 AIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAH 595
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI P HY + DLLGRAG L+EA + I +M P + VW +LL+ACR HKNVELA
Sbjct: 596 GIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYA 655
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
AEK+ + P +G +V+LSN YA+A +W D A +R+ M+ KG++K P S IEV+ +
Sbjct: 656 AEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHE 715
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F +GD+SH I L+E+ R+ + GYVPDT VL DV+E++K++LL HSE+LA+
Sbjct: 716 FTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMA 775
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+G+I T G IR++KNLR+C DCH+ K +SK+ REI VRDN+R+H F++G CSC DY
Sbjct: 776 YGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDY 835
Query: 514 W 514
W
Sbjct: 836 W 836
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 199/380 (52%), Gaps = 17/380 (4%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
++ L +N +I G A GL ++A+ + QM + + PD +T +L + + + +G +
Sbjct: 92 MASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQ 151
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HG ++ GL+ ++ + +SLI+ YA+C +V+ +LF + ++ +SW S+I G L
Sbjct: 152 VHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDL 211
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E + F QM A ++P V+ ++ ACA L L LGK++ I G + + + ++
Sbjct: 212 SKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNA 271
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMY KCG+I AR IFD+ ++V + ++ H A D + + ++M + G +P+
Sbjct: 272 LVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPD 331
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V ++ + AC+ G + S + ++ G+ A+ D+ + GK + A +
Sbjct: 332 KVTMLSTIAACAQLGDLSVGKSSHAYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 303 SNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF---MIDPNNM-GAYVILSNTYA 356
+M P + V W +L++ ++ELA ++ +++ ++ N M GA V +S
Sbjct: 391 EHM---PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVS---- 443
Query: 357 AARRWKDAASLRVFMRNKGM 376
+++A L M+N+G+
Sbjct: 444 ---MFEEAIELFREMQNQGI 460
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ +W I +A G E A+ + +M +KPD ++L + V +G
Sbjct: 525 MEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQG 584
Query: 61 KEIH-GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+++ HG+ ++ ++++ + +E++ L +P++ + + W S++A C
Sbjct: 585 RQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAAC 643
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/509 (40%), Positives = 320/509 (62%), Gaps = 5/509 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G + EEAL + M ++PD FT VL + V +G ++HG+
Sbjct: 66 YNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVF 125
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG--CVQNGLFDEG 126
+ GL+ +V + +SLINMY KC ++++ +F + K SW++II CV+ +++E
Sbjct: 126 KMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVE--MWNEC 183
Query: 127 LKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L +M + + + +++ AC HL + LGK +HG ++RN + N+ + +SL+D
Sbjct: 184 LMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLID 243
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY K G + +F M + S+T +I G A+HG +A+ +F +M ++G+ P+ V
Sbjct: 244 MYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVV 303
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+V V +ACSHAGL+++ F SM ++ I P+ +HY + DLLGR G L+EAYE I +M
Sbjct: 304 YVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSM 363
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
P + +W +LLSAC+VH N+E+ AE +FM++ NN G Y++L+N YA A++W D A
Sbjct: 364 SIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVA 423
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVP 425
+R + + + +TP S IE K K Y FV+ DKS P ++ I E + ++ +++ EGY+P
Sbjct: 424 KIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIP 483
Query: 426 DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFIS 485
DT +VL DV++E+KK L +HS++LAI FG+I T +G+ +RI +NLR+C DCHT K+IS
Sbjct: 484 DTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYIS 543
Query: 486 KIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I +REI VRD RFHHF++G CSC DYW
Sbjct: 544 MIYEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 136/281 (48%), Gaps = 9/281 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K++H + ++ G+ + S+L+ A K ++ + +F + + +N++I G V
Sbjct: 15 KQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTMIRGNV 74
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ +E L + M+ ++P ++ ++ AC+ L + G Q+HG + + G + ++
Sbjct: 75 NDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVI 134
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL++MY KCG I+ A +F+ MD + SW+A+I +A ++ + L +M +G
Sbjct: 135 VQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEG 194
Query: 239 -VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ V VL+AC+H G D + ++ + ++ D+ ++G L++
Sbjct: 195 RCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNIS-ELNVVVKTSLIDMYVKSGCLEK 253
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
NM + + ++S +H GK A K+F
Sbjct: 254 GLRVFKNM-SEKNRYSYTVMISGLAIHGR----GKEALKVF 289
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/493 (41%), Positives = 306/493 (62%), Gaps = 2/493 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WNT+I G A G A ++ R+M L +PD+ T ++ DV G+ IH
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR G + + + +SL+++YA C V ++++F +P KD ++WNS+I G +NG +E L
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ +M IKP + S++ ACA + L LGK++H +I+ G N+ ++ LLD+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVKPNSVAF 246
A+CG + A+ +FD+M + VSWT++I+G A++G +AI LF+ ME +G+ P + F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V +L ACSH G++ + + YF M ++Y I P EH+ + DLL RAG++++AYE+I +M
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W TLL AC VH + +LA +I ++PN+ G YV+LSN YA+ +RW D
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M G+KK P S +EV N+ + F+ GDKSHP I LKE+ R+ EGYVP
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
V DVEEE+K+N + YHSE++AI F +I TP+ + I ++KNLRVC DCH AIK +SK
Sbjct: 508 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 567
Query: 487 IVQREIIVRDNSR 499
+ REI+VRD SR
Sbjct: 568 VYNREIVVRDRSR 580
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 133/246 (54%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV+WN+VI G A NG EEAL + +M + +KPD FT+ S+L A + G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y I+ GL N+ + L+++YA+C RVE++ LF + K+++SW S+I G N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E ++ F+ M + + P ++F I+ AC+H + G + +R + I
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR-RMREEYKIEPRI 360
Query: 180 A--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+ A+ G ++ A M + ++V W ++ +HG++ ++ F +++
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQI 418
Query: 237 DGVKPN 242
++PN
Sbjct: 419 LQLEPN 424
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 134/256 (52%), Gaps = 9/256 (3%)
Query: 57 VIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVED---SHRLFCLL--PVKDAISW 110
+ K ++IH ++IRHG+ ++ +G LI +H++F + P+ + W
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NVFIW 88
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
N++I G + G +R+M ++ ++P ++ ++ A + + LG+ +H +I
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
R+GF +++ +SLL +YA CG++ A +FDKM D+V+W +VI G A +G +A++
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
L+ +M G+KP+ V++L+AC+ G + M K G+ + + DL
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLY 267
Query: 290 GRAGKLQEAYEFISNM 305
R G+++EA M
Sbjct: 268 ARCGRVEEAKTLFDEM 283
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 307/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
MP D V+W +I G A+NG E A+ R M L D SVL D
Sbjct: 332 MPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWL 391
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
K IH + G + V + ++LI+MYAK VE + R+ + P + +S S+I G +
Sbjct: 392 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 451
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ +E L + ++ ++P +FSS++ CA L G QLH +I+ + F
Sbjct: 452 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF 511
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+DMY KCG I L+ +F++++ ++W AVI A HG+ +AI F++M G
Sbjct: 512 VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG 571
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++PN +AFV++LTACSHAGL+D+ YF SM + +GI P EHY+ + D GRAG+L EA
Sbjct: 572 IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEA 631
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FIS M P W +LL ACR+ + EL A+ + ++P N G +V LS YA+
Sbjct: 632 YKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASL 691
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+D ++R MR+ +KK P SW++ K + F + D SHP I E L+EL R+
Sbjct: 692 GQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRI 751
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++EGY+PDT + ++E+ K+ +L YHSER+A+ F +I P I + KNLR+C DCH
Sbjct: 752 KEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCH 811
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFI K+ +R+IIVRDNSRFHHF +G+CSCGDYW
Sbjct: 812 TAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 178/358 (49%), Gaps = 11/358 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW T++ GL++N ++ +AL M + P F LSS A ++
Sbjct: 232 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRA 291
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ A G D + + S+L +MY+KC + ++ R+F +P KDA++W ++I G +N
Sbjct: 292 RSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 350
Query: 121 GLFDEGLKFFRQMLIAKI--KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + + FR M + +HV F S++ A L L K +H C+ + GF+ +
Sbjct: 351 GSLEAAVLSFRDMKREGLVGADQHV-FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 409
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++L+DMYAK ++ A + K+D ++VS T++I G +A+ ++ ++ +
Sbjct: 410 VRNALIDMYAKSMDVESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 468
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV+PN F +++ C+ L+++ + K I SF + + D+ G+ G +
Sbjct: 469 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVG-STLVDMYGKCGLIS 527
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ + + + T+ W +++ H + A + +++ I PN++ +L+
Sbjct: 528 LSMQLFNEIEY-RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 584
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVEDSHRLFCLL 102
L+S+L D+ +G+ +H + G A + + + LI MY+ CA + + RLF +
Sbjct: 173 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 232
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P ++A+SW ++++G QN + + L F M A + P + SS A A L +
Sbjct: 233 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR 292
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
GFD +F+AS+L DMY+KCG + A +FD+M D V+WTA+I G A +G
Sbjct: 293 SCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 351
Query: 223 NAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLIDKAW 263
+ A+ F M+++G V + F +VL+A +G + W
Sbjct: 352 SLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGW 390
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 50/249 (20%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVEDSHRLFCLL 102
L+S+L D+ +G+ +H + G A + + + LI MY+ CA + + RLF +
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM------------- 149
P ++A+SW ++++G QN + + L F M A + P + + +
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142
Query: 150 --------------------PACAHLTTLHLGKQLHGC----------------IIRNGF 173
PA A TT+HL L C ++
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ F+A+ L+ MY+ C ++ A +F M + VSWT ++ G + + DA++ F
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262
Query: 234 MEKDGVKPN 242
M + GV P
Sbjct: 263 MRRAGVAPT 271
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 127 LKFFRQMLIAKIKP---RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD-NMFIASS 182
+K++ Q L P V +S++ +C L G+ LH ++ +G + F+A+
Sbjct: 2 VKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANH 61
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MY+ C ++ A +F M + VSWT ++ G + + DA++ F M + GV P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
Query: 243 SVAF 246
+ +
Sbjct: 122 RLIY 125
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 318/565 (56%), Gaps = 51/565 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNG---LYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVD 56
MP + WNT++ LA L EAL + M + +KP+ FT SVL A
Sbjct: 78 MPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASR 137
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL--------------- 101
+ +GK+IHG ++ G + + S+L+ MY CA +ED++ LFC
Sbjct: 138 LREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDK 197
Query: 102 --------------------------------LPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+P + +SWN +I+G QNG F E +
Sbjct: 198 RKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINL 257
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M + I P +V+ S++PA A + L LGK +H +N + + + S+L+DMY+K
Sbjct: 258 FQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSK 317
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CG+I A +F+ + + ++W+A+I A+HG A DAI F M K GV PN VA++ +
Sbjct: 318 CGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGI 377
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L+ACSHAGL+++ S+F+ M K G+ P EHY + DLLGRAG L+EA E I NM P
Sbjct: 378 LSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEP 437
Query: 310 TENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRV 369
+ +W LL AC++HKN+++ +VAE + + P++ G+YV LSN YA+ W+ A +R+
Sbjct: 438 DDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRL 497
Query: 370 FMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKE 429
M+ ++K P CSWIE+ + F+ D SH I L E+ ++ GY P+T E
Sbjct: 498 KMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLE 557
Query: 430 VLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQ 489
V + +E+++ L YHSE++A+ FG+I T ++I+KNLR+C DCH ++K IS I +
Sbjct: 558 VFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYK 617
Query: 490 REIIVRDNSRFHHFEDGKCSCGDYW 514
R+IIVRD RFH FE G CSC DYW
Sbjct: 618 RQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 307/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
MP D V+W +I G A+NG E A+ R M L D SVL D
Sbjct: 102 MPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWL 161
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
K IH + G + V + ++LI+MYAK VE + R+ + P + +S S+I G +
Sbjct: 162 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 221
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ +E L + ++ ++P +FSS++ CA L G QLH +I+ + F
Sbjct: 222 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF 281
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+DMY KCG I L+ +F++++ ++W AVI A HG+ +AI F++M G
Sbjct: 282 VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG 341
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++PN +AFV++LTACSHAGL+D+ YF SM + +GI P EHY+ + D GRAG+L EA
Sbjct: 342 IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEA 401
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FIS M P W +LL ACR+ + EL A+ + ++P N G +V LS YA+
Sbjct: 402 YKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASL 461
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+D ++R MR+ +KK P SW++ K + F + D SHP I E L+EL R+
Sbjct: 462 GQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRI 521
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
++EGY+PDT + ++E+ K+ +L YHSER+A+ F +I P I + KNLR+C DCH
Sbjct: 522 KEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCH 581
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TA KFI K+ +R+IIVRDNSRFHHF +G+CSCGDYW
Sbjct: 582 TAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 181/358 (50%), Gaps = 10/358 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSW T++ GL++N ++ +AL M + P F LSS A + G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +R G D + + S+L +MY+KC + ++ R+F +P KDA++W ++I G +N
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 121 GLFDEGLKFFRQMLIAKI--KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + + FR M + +HV F S++ A L L K +H C+ + GF+ +
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHV-FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ ++L+DMYAK ++ A + K+D ++VS T++I G +A+ ++ ++ +
Sbjct: 180 VRNALIDMYAKSMDVESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 238
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GV+PN F +++ C+ L+++ + K I SF + + D+ G+ G +
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVG-STLVDMYGKCGLIS 297
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ + + + T+ W +++ H + A + +++ I PN++ +L+
Sbjct: 298 LSMQLFNEIEY-RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 314/518 (60%), Gaps = 7/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARN---GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP D V+WN +I G A N EA N++R+ G + + T+ ++L F D+
Sbjct: 420 MPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG---VPVNYITIVNLLSAFLSPDDL 476
Query: 58 IK-GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ G IH + + G + + SSLI MYA+C + S+ +F +L K++ +WN+I++
Sbjct: 477 LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSA 536
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
G +E LK +M I SFS +LT L G+QLH II++GF+ N
Sbjct: 537 NAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESN 596
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++ ++ +DMY KCG I I + SW +I A HG A F +M
Sbjct: 597 DYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLD 656
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G++P+ V FV++L+ACSH GL+D+ +YF+SM+ +G+ EH + DLLGRAGKL
Sbjct: 657 LGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLT 716
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA FI+ M PT+ VW +LL+AC++H N+ELA K A+++F +D ++ AYV+ SN A
Sbjct: 717 EAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCA 776
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ RRW+D ++R M + +KK PACSW+++KN+ F GD+ HP I L+EL +
Sbjct: 777 STRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKK 836
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ + GY+PDT L D +EEQK++ L+ HSER+A+ FG+I + +G+ +RI KNLRVCGD
Sbjct: 837 IIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGD 896
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+ K +S+I+ R+II+RD RFHHF GKCSC DYW
Sbjct: 897 CHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 141/249 (56%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +++VG A NG +E +++ R++ + + +++V+ VD + G ++
Sbjct: 124 NIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVL 183
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G I+ GLD V + +SLI+M+ C +E++ +F + +D ISWNSII V NG +
Sbjct: 184 GSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCE 243
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L++F QM K +++ S+++P C L G+ LHG ++++G + N+ + +SLL
Sbjct: 244 KSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLL 303
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY++ G A +F KM D++SW +++ + +GN A+ L +M + N V
Sbjct: 304 SMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYV 363
Query: 245 AFVAVLTAC 253
F L+AC
Sbjct: 364 TFTTALSAC 372
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 144/252 (57%), Gaps = 3/252 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SWN++I NG E++L QM + K D T+S++LP+ ++ G
Sbjct: 221 MKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG 280
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG ++ GL++NVC+ +SL++MY++ + ED+ +F + +D ISWNS++A V N
Sbjct: 281 RGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDN 340
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L+ +ML + +V+F++ + AC +L TL K +H +I G N+ I
Sbjct: 341 GNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIG 397
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G++ A+ + M D V+W A+I G+A + + AI F + ++GV
Sbjct: 398 NALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVP 457
Query: 241 PNSVAFVAVLTA 252
N + V +L+A
Sbjct: 458 VNYITIVNLLSA 469
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + SWN ++ G R G Y++A+ M ++P S+ +S++ + +G
Sbjct: 18 MPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEG 77
Query: 61 K-EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++H + I+ GL +V +G+SL++ Y V + +F + + +SW S++ G
Sbjct: 78 AFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAY 137
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E + +R++ + + ++++ +C L LG Q+ G +I++G D + +
Sbjct: 138 NGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSV 197
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+ M+ C +I A C+FD M D +SW ++I + +G+ ++ F QM
Sbjct: 198 ANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHA 257
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSY-FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
K + + A+L C A + W + M G+ + ++ + +AGK ++A
Sbjct: 258 KTDYITISALLPVCGSAQ--NLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDA 315
Query: 299 YEFI 302
EF+
Sbjct: 316 -EFV 318
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 126/239 (52%), Gaps = 7/239 (2%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY+K +E + +F +P ++ SWN++++G V+ G + + ++FF ML ++P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 145 FSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+S++ AC + G Q+H +I+ G ++F+ +SLL Y G + +F ++
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ +IVSWT++++G A +G + +S++ ++ +DGV N A V+ +C L+DK
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC--GVLVDKML 178
Query: 264 SY--FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
Y S+ K G+ + ++ + G ++EA +M T + W ++++A
Sbjct: 179 GYQVLGSVIKS-GLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTIS-WNSIITA 235
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 313/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW+ +I A L++EA+ +M ++P+ +T +SVL A D+ G
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 341
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + +G + G++L+++Y ++++ LF + +D W +I G +
Sbjct: 342 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 401
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G L+ +R+M K+ + +S ++ ACA L +Q H I +G + +
Sbjct: 402 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 461
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL++MY++ GN+ AR +FDKM D ++WT +I G A HG A+ L+++ME +G
Sbjct: 462 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 521
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + F+ VL ACSHAGL ++ F S+ DY + P+ HY+ + DLL RAG+L +A
Sbjct: 522 EPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAE 581
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I+ M P + W +LL A R+HK+V+ A A +I +DP + +YV+LSN +A
Sbjct: 582 ELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTG 641
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
AS+R M +G+KK SWIEV ++ + F GD SHP + I L+ L +++
Sbjct: 642 NLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIK 701
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP+++EVLHDV E++K+ LL HSE+LAI FG+I T GTT+RI LR+C DCH+
Sbjct: 702 EAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHS 761
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+KFIS I +REIIVRD+SRFH F DG+CSCGDYW
Sbjct: 762 AVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 187/345 (54%), Gaps = 17/345 (4%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I A++G +EEA+ + M +++P T +SVL ++ + +G++IH
Sbjct: 191 SWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALI 247
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
G + ++ + ++L+ MYA+C ++D+ ++F LP +D +SW+++IA + LFDE +
Sbjct: 248 SSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAI 307
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+F+ +M + ++P + +F+S++ ACA + L G+ +H I+ NG+ + ++L+D+Y
Sbjct: 308 EFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLY 367
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS-VAF 246
G++ AR +FD+++ D WT +I G + G+ + L+ +M+ P + + +
Sbjct: 368 TSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIY 427
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V++AC+ G A + + D G+ F ++ ++ R G L+ A + M
Sbjct: 428 SCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQVFDKMS 486
Query: 307 AGPTENVWLTLLS----------ACRVHKNVELAG-KVAEKIFMI 340
+ T W TL++ A ++K +EL G + +E FM+
Sbjct: 487 SRDTL-AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMV 530
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 170/313 (54%), Gaps = 10/313 (3%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY- 66
SW +++ A+NG Y AL++ ++M +L+P+ ++VL A + +GK IH
Sbjct: 91 SWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRI 147
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI-SWNSIIAGCVQNGLFDE 125
+ GL +V + +SL+ MYAKC +ED+ RLF + + ++ SWN++IA Q+G F+E
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEE 207
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ + M ++P +F+S++ AC++L L G+++H I G + ++ + ++LL
Sbjct: 208 AIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLT 264
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYA+C + A IF ++ D+VSW+A+I A +AI + +M+ +GV+PN
Sbjct: 265 MYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYT 324
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F +VL AC+ G + + + + + G + + A+ DL G L EA +
Sbjct: 325 FASVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQI 383
Query: 306 HAGPTENVWLTLL 318
E +W L+
Sbjct: 384 E-NRDEGLWTVLI 395
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 9/209 (4%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D+ ++IH I ANV +G+ ++ Y KC V + F + K+ SW S++
Sbjct: 39 DLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLT 97
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFD 174
QNG + L +++M ++P V +++++ ACA + L GK +H I G
Sbjct: 98 AYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLK 154
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
++ + +SLL MYAKCG++ A+ +F++M + SW A+I A G+ +AI L+E
Sbjct: 155 LDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYED 214
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M+ V+P+ F +VL+ACS+ GL+D+
Sbjct: 215 MD---VEPSVRTFTSVLSACSNLGLLDQG 240
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+Q+H I N+F+ + ++ Y KCG++ AR FD + + SW +++ A +
Sbjct: 44 RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQN 102
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G+ A+ L+++M+ ++PN V + VL AC+ +++ + + ++ G+
Sbjct: 103 GHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVIL 159
Query: 282 YAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
++ + + G L++A M + + W +++A + E A ++ E +
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 308/522 (59%), Gaps = 11/522 (2%)
Query: 1 MPVSDLVSWNTVIVGLAR-----NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
MP ++V +N +I G + + EA+ + +M + +KP FT SS+L +
Sbjct: 205 MPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIE 264
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
GK+IH ++ L ++ IG++L+ +Y+ +ED + F P D +SW S+I
Sbjct: 265 AFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIV 324
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G VQNG F+ GL F ++L + KP + S ++ ACA+L + G+Q+H I+ G +
Sbjct: 325 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 384
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
I +S + MYAKCG+I A F + DIVSW+ +I NA HG A +A+ LFE M+
Sbjct: 385 FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMK 444
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+ PN + F+ VL ACSH GL+++ YF M KD+GI P+ +H A + DLLGRAG+L
Sbjct: 445 GSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 504
Query: 296 QEAYEFI--SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
EA FI S P +W +LLSACRVHK + +VAE++ ++P +YV+L N
Sbjct: 505 AEAESFIMDSGFEGDPV--MWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYN 562
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
Y A A +R M+++G+KK P SWIEV N ++FVAGD+SHP I L+E
Sbjct: 563 IYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEE 622
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKN-LLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+LE +++ Y+ D K V E + K N ++ YHSE+LA+ FGII P +R++KNLR
Sbjct: 623 MLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLR 681
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C CH +K S++ REII+RD RFH F DG CSCGDYW
Sbjct: 682 SCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 145/261 (55%), Gaps = 7/261 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSWN++I G + G Y E +N+ ++ +L+ D FT S+ L + +D+ G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH GL V + +SLI+MY KC R++ + +F D++SWNS+IAG V+
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH--LTTLHLGKQLHGCIIRNGFDDNMF 178
G DE L+ +ML + + S + AC +++ GK LHGC ++ G D ++
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG-----NALHGNAHDAISLFEQ 233
+ ++LLD YAK G++ A IF M ++V + A+I G A++A+ LF +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 234 MEKDGVKPNSVAFVAVLTACS 254
M+ G+KP+ F ++L ACS
Sbjct: 241 MQSRGMKPSEFTFSSILKACS 261
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/546 (36%), Positives = 316/546 (57%), Gaps = 33/546 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKG 60
P DL ++ ++ ++ + E L ++R+M + L+PD F L+S+ + G
Sbjct: 63 PRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLG 122
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + A+ + SSLI+MY KC +D+ ++F + VK+++ W ++I+G N
Sbjct: 123 RQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASN 182
Query: 121 GLFDEGLKFFRQM--------------------------LIAKIKPRHVS------FSSI 148
G E L F+ M L +++ + +++
Sbjct: 183 GCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATV 242
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ A L L LG+QLHG ++R GF +M + ++L+DMY+KC +I AR +F+ + + D+
Sbjct: 243 IGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDV 302
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWT +++G A HG A + +L+ +M G+KPN V FV ++ ACSHAGL+ K F+S
Sbjct: 303 ISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDS 362
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M ++YG+ P +HY DLL R+G L EA + I+ M P E W LLSAC+ H + +
Sbjct: 363 MKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQ 422
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+ +VA+ + + P + Y++LSN YA +W A +R M ++K P SW+E
Sbjct: 423 MCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAG 482
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
++ F AG+ I L+EL+ M + GYVPDT V+HD+EE +K+ L+ HSE
Sbjct: 483 RESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSE 542
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
RLA+ FGI+ +P G+ IR++KNLRVCGDCHT +KFIS I QR+IIVRD SRFHHFEDG C
Sbjct: 543 RLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNC 602
Query: 509 SCGDYW 514
SC ++W
Sbjct: 603 SCSEFW 608
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 129/244 (52%), Gaps = 7/244 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIK 59
MP L +W +I G + G Y A+ + +M +++ D+F L++V+ AD ++
Sbjct: 195 MPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVL 254
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++HG+ +R G +++ +G++L++MY+KC+ + + +F + V+D ISW +I+ G Q
Sbjct: 255 GRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQ 314
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G +E + +ML+A +KP V+F ++ AC+H + G+QL + R G +
Sbjct: 315 HGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQ 374
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAI----SLFEQ 233
+ LD+ ++ G + A + M D +W A++ H + + +L E
Sbjct: 375 HYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLEL 434
Query: 234 MEKD 237
KD
Sbjct: 435 RPKD 438
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H ++ GL + L++ YA+ + D+ R F P +D +++++A +
Sbjct: 21 RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHS 80
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ L R+ML ++P H +S+ A L +L LG+QLH + + + +
Sbjct: 81 SDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVV 140
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SSL+DMY KCG + AR +FD + + + V WTA+I G A +G +A+ LF+ M G+
Sbjct: 141 KSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGL 200
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
+ A+++ AG A F M +D
Sbjct: 201 ----FTWTALISGFVKAGNYTGAMGLFVEMRRD 229
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 308/522 (59%), Gaps = 11/522 (2%)
Query: 1 MPVSDLVSWNTVIVGLAR-----NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
MP ++V +N +I G + + EA+ + +M + +KP FT SS+L +
Sbjct: 284 MPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIE 343
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
GK+IH ++ L ++ IG++L+ +Y+ +ED + F P D +SW S+I
Sbjct: 344 AFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIV 403
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G VQNG F+ GL F ++L + KP + S ++ ACA+L + G+Q+H I+ G +
Sbjct: 404 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 463
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
I +S + MYAKCG+I A F + DIVSW+ +I NA HG A +A+ LFE M+
Sbjct: 464 FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMK 523
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+ PN + F+ VL ACSH GL+++ YF M KD+GI P+ +H A + DLLGRAG+L
Sbjct: 524 GSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 583
Query: 296 QEAYEFI--SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
EA FI S P +W +LLSACRVHK + +VAE++ ++P +YV+L N
Sbjct: 584 AEAESFIMDSGFEGDPV--MWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYN 641
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
Y A A +R M+++G+KK P SWIEV N ++FVAGD+SHP I L+E
Sbjct: 642 IYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEE 701
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKN-LLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
+LE +++ Y+ D K V E + K N ++ YHSE+LA+ FGII P +R++KNLR
Sbjct: 702 MLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLR 760
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C CH +K S++ REII+RD RFH F DG CSCGDYW
Sbjct: 761 SCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 145/261 (55%), Gaps = 7/261 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSWN++I G + G Y E +N+ ++ +L+ D FT S+ L + +D+ G
Sbjct: 80 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 139
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH GL V + +SLI+MY KC R++ + +F D++SWNS+IAG V+
Sbjct: 140 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 199
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH--LTTLHLGKQLHGCIIRNGFDDNMF 178
G DE L+ +ML + + S + AC +++ GK LHGC ++ G D ++
Sbjct: 200 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 259
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG-----NALHGNAHDAISLFEQ 233
+ ++LLD YAK G++ A IF M ++V + A+I G A++A+ LF +
Sbjct: 260 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 319
Query: 234 MEKDGVKPNSVAFVAVLTACS 254
M+ G+KP+ F ++L ACS
Sbjct: 320 MQSRGMKPSEFTFSSILKACS 340
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 115/219 (52%)
Query: 35 VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED 94
+ L DS T + ++ +I GK H + I+ + + ++L+ MY KC +
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ +LF +P ++ +SWNS+I+G Q G + E + F++ ++ ++ +FS+ + C
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L LG+ +H I +G + + +SL+DMY KCG I AR +F+ D D VSW ++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
I G G+ + + L +M + G+ NS A + L AC
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC 231
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 315/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D++SW+++I GL NG E+AL + R M + S L L A G
Sbjct: 207 MPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVG 266
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+IH + G + + +SL+ YA C ++E + R+F + K + W +++ G
Sbjct: 267 IQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGL 326
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N E L+ F +M+ + P SF+S + +C L + GK +H ++ G + ++
Sbjct: 327 NDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYV 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
SL+ MY+KCG + A +F ++ ++VSW +VI+G A HG A++LF QM ++GV
Sbjct: 387 GGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGV 446
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + +L+ACSH+G++ KA +F + + + EHY ++ D+LGR G+L+EA
Sbjct: 447 DPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAE 506
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ +M VWL LLSACR H N++LA + A +IF I+P+ AYV+LSN YA++
Sbjct: 507 AVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSS 566
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + A +R M++ G+ K P SW+ +K + + F++ D+SHP +I + L+ L +++
Sbjct: 567 RWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLK 626
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVPD + LHDVE EQK+ +L YHSERLAI FG++ T +G+ I ++KNLRVCGDCH
Sbjct: 627 ELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHN 686
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ++KIV REI+VRD+SRFH F++G CSCGDYW
Sbjct: 687 AIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 131/256 (51%), Gaps = 11/256 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWN++I G G A + +M + + + +L + +++
Sbjct: 112 IPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRL-----GIVQE 166
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E +A+ +D +V +++I+ Y RV+D+ +LFC +P +D ISW+S+IAG N
Sbjct: 167 AETLFWAME-PMDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHN 225
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG---FDDNM 177
G ++ L FR M+ + + + A A + +G Q+H + + G FD+
Sbjct: 226 GKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDE-- 283
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F+++SL+ YA C + A +F ++ +V WTA++ G L+ +A+ +F +M +
Sbjct: 284 FVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRI 343
Query: 238 GVKPNSVAFVAVLTAC 253
V PN +F + L +C
Sbjct: 344 DVVPNESSFTSALNSC 359
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+V + + +++ YA+ R+ ++ LF +P KD +SWNSII GC+ G K F +M
Sbjct: 85 HVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEM- 143
Query: 135 IAKIKPRH--VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
PR VS+++++ L + + L + D ++ ++++ Y G
Sbjct: 144 -----PRRTVVSWTTLVDGLLRLGIVQEAETLFWAM--EPMDRDVAAWNAMIHGYCSNGR 196
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ A +F +M D++SW+++I G +G + A+ LF M GV +S V L+A
Sbjct: 197 VDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSA 256
Query: 253 CS 254
+
Sbjct: 257 AA 258
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/512 (39%), Positives = 309/512 (60%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFA----DYVDVIKGKEIH 64
WN + LA E+ L + QM + + + FT + VL + KGKEIH
Sbjct: 143 WNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIH 202
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +RHG + +V + ++L+++YA+ V + +F +P K+ +SW+++IA +N +
Sbjct: 203 AHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPM 262
Query: 125 EGLKFFRQMLIAKIK--PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ L+ F+ M++ P ++ S++ ACA L L GK +H ++R G D + + ++
Sbjct: 263 KALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNT 322
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MY +CG I + +FD M D++SW ++I +HG AI +FE M GV P+
Sbjct: 323 LITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPS 382
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
+ F+ VL ACSHAGL+++A F SM Y I P EHYA + D+LGRA +L EA E I
Sbjct: 383 YITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELI 442
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
NM P VW +LL +CR+H NVELA + + +F ++P N G YV+LS+ YA +R W
Sbjct: 443 QNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWN 502
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
D +R + ++G++K P+CSWIEVK K Y+ V+ ++ +P + L LL ++ +G
Sbjct: 503 DVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQG 562
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVP T V +D++EE+K+ ++ HS +LA+ FG+I T G IRI NLR+C DCH +K
Sbjct: 563 YVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMK 622
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
F+SK REI++RD +RFH F+DG CSCGDYW
Sbjct: 623 FVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP ++VSW+ +I A+N + +AL + + M + P+ T+ SVL A +
Sbjct: 240 MPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALE 299
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
GK +H Y +R GLD+ + + ++LI MY +C + R+F + +D ISWNS+I+
Sbjct: 300 HGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYG 359
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+GL + ++ F M+ + P +++F +++ AC+H
Sbjct: 360 MHGLGKKAIQIFENMINRGVSPSYITFITVLCACSH 395
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 103 PVKDAISWNS--IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
P KD S N+ +I + G LK Q+L + P +F ++ +C +L
Sbjct: 37 PTKDIKSNNNDDLIQSLCRGG----NLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSD 92
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
G +H ++ +G D + ++A+ L++MY G++ A +FD+ I W A+ A+
Sbjct: 93 GVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAM 152
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
D + L+ QM G+ N + VL AC
Sbjct: 153 ASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKAC 185
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 302/479 (63%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
N+ P ++T +SV+ AD V + G+ IHG+ + +G ++V + ++L++ Y KC + ++
Sbjct: 106 NVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNA 165
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
++F + + ++WNS+I+G QNG E ++ F +M ++P +F S++ ACAHL
Sbjct: 166 RKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHL 225
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
LG +H + NG D N+ + +SL++MY +CGN+ AR +FD M ++V+WTA+I
Sbjct: 226 GAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMI 285
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G +G A+ LF +M ++G+ PNS+ FVAVL+AC+HAGL+++ F SM ++Y +
Sbjct: 286 SGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRL 345
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
P EH+ + D+LGRAG L EAY FI +H P +W +L AC++HKN L +VAE
Sbjct: 346 VPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAE 405
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
+P N YVILSN YA A R +R M K +KK S I++ K Y F
Sbjct: 406 HRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFS 465
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFG 455
GDKSH + I L +L+ + + GYV + V+H++EEE+++ L YHSE+LAI FG
Sbjct: 466 MGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFG 525
Query: 456 IICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ T GT IRI+KNLR+C DCH+AIK+IS I REIIVRD RFHHF++G CSC DYW
Sbjct: 526 LLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 139/246 (56%), Gaps = 4/246 (1%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H + I G + + + L+N+ + + ++F ++P D+ + S+I +
Sbjct: 30 QVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFH 89
Query: 122 LFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F L F+ +M+++ + P + +F+S++ +CA L L G+ +HG ++ NGF ++++
Sbjct: 90 NFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQ 149
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ Y KCG + AR +FDKM +V+W ++I G +G A +AI LF++M++ GV+
Sbjct: 150 TALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVE 209
Query: 241 PNSVAFVAVLTACSHAG-LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PNS FV+VL+AC+H G I W + ++ G+ + ++ ++ R G + +A
Sbjct: 210 PNSATFVSVLSACAHLGAFILGCWVHEYAVGN--GLDLNVVLGTSLINMYTRCGNVSKAR 267
Query: 300 EFISNM 305
E +M
Sbjct: 268 EVFDSM 273
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 95/160 (59%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+V+WN++I G +NG +EA+ + +M + ++P+S T SVL A I G +H
Sbjct: 176 SVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVH 235
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YA+ +GLD NV +G+SLINMY +C V + +F + ++ ++W ++I+G NG
Sbjct: 236 EYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+ ++ F +M + P ++F +++ ACAH ++ G+++
Sbjct: 296 QAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRV 335
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P +++ ++ A L LH Q+H +I +G+ + F+ + LL++ G+I R I
Sbjct: 10 PHSPAYNLLLQAGPRLKLLH---QVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66
Query: 200 FDKMDLHDIVSWTAVIMGNA-LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
F + D +T++I + H + ++ + +M V P++ F +V+ +C+
Sbjct: 67 FLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCA 122
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/518 (40%), Positives = 314/518 (60%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L +WN + ++G +A+ ++ V+ +P++ T + L AD V + G
Sbjct: 170 MPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELG 229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCV 118
+++HG+ +R +V + + LI+ Y KC + S +F + ++ +SW S++A V
Sbjct: 230 RQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALV 289
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QN + F Q +++P SS++ ACA L L LG+ +H ++ ++N+F
Sbjct: 290 QNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIF 348
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD- 237
+ S+L+D+Y KCG+I A +F +M ++V+W A+I G A G+ A+SLF++M
Sbjct: 349 VGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGS 408
Query: 238 -GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ + V V+VL+ACS AG +++ F SM YGI P EHYA V DLLGR+G +
Sbjct: 409 CGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVD 468
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
AYEFI M PT +VW LL AC++H +L AEK+F +DP++ G +V+ SN A
Sbjct: 469 RAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLA 528
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+A RW++A +R MR+ G+KK SW+ VKN+ + F A D H I L +L
Sbjct: 529 SAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRG 588
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
M++ GYVPD L D+EEE+K + ++YHSE++A+ FG+I P G IRI KNLR+C D
Sbjct: 589 EMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICID 648
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+AIKFISKIV REIIVRDN+RFH F+DG CSC DYW
Sbjct: 649 CHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 178/359 (49%), Gaps = 9/359 (2%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V+W ++I G N + AL M + P+ FT V A + GK++H
Sbjct: 74 VVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHA 133
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
A++ G +V +G S +MY+K ++ +F +P ++ +WN+ ++ VQ+G +
Sbjct: 134 LALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLD 193
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
+ F++ L +P ++F + + ACA + +L LG+QLHG I+R+ + +++ + + L+D
Sbjct: 194 AIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLID 253
Query: 186 MYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
Y KCG+I + +F ++ ++VSW +++ + A +F Q K+ V+P
Sbjct: 254 FYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTD 312
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+VL+AC+ G ++ S +++ + + +A+ DL G+ G ++ A +
Sbjct: 313 FMISSVLSACAELGGLELGRS-VHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFR 371
Query: 304 NMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
M P N+ W ++ +V++A + +++ +YV L + +A R
Sbjct: 372 EM---PERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSR 427
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 3/263 (1%)
Query: 60 GKEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G+ +H + +R H + + L+NMY+K + + L + ++W S+I+GCV
Sbjct: 26 GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
N F L F M + P +F + A A L GKQLH ++ G ++F
Sbjct: 86 HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S DMY+K G AR +FD+M ++ +W A + G DAI+ F++
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVD 205
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+PN++ F A L AC+ ++ + + + + D G+ G + +
Sbjct: 206 GEPNAITFCAFLNACADIVSLELGRQLHGFIVRSR-YREDVSVFNGLIDFYGKCGDIVSS 264
Query: 299 YEFISNMHAGPTENV-WLTLLSA 320
S + +G V W +LL+A
Sbjct: 265 ELVFSRIGSGRRNVVSWCSLLAA 287
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 313/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSW+ +I A L++EA+ +M ++P+ +T +SVL A D+ G
Sbjct: 281 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 340
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + +G + G++L+++Y ++++ LF + +D W +I G +
Sbjct: 341 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 400
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G L+ +R+M K+ + +S ++ ACA L +Q H I +G + +
Sbjct: 401 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 460
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL++MY++ GN+ AR +FDKM D ++WT +I G A HG A+ L+++ME +G
Sbjct: 461 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 520
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + F+ VL ACSHAGL ++ F S+ DY + P+ HY+ + DLL RAG+L +A
Sbjct: 521 EPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAE 580
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I+ M P + W +LL A R+HK+V+ A A +I +DP + +YV+LSN +A
Sbjct: 581 ELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTG 640
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
AS+R M +G+KK SWIEV ++ + F GD SHP + I L+ L +++
Sbjct: 641 NLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIK 700
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYVP+++EVLHDV E++K+ LL HSE+LAI FG+I T GTT+RI LR+C DCH+
Sbjct: 701 EAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHS 760
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+KFIS I +REIIVRD+SRFH F DG+CSCGDYW
Sbjct: 761 AVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 189/352 (53%), Gaps = 17/352 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + SWN +I A++G +EEA+ + M +++P T +SVL ++ + +G
Sbjct: 183 MSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG 239
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH G + ++ + ++L+ MYA+C ++D+ ++F LP +D +SW+++IA +
Sbjct: 240 RKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAET 299
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
LFDE ++F+ +M + ++P + +F+S++ ACA + L G+ +H I+ NG+ +
Sbjct: 300 DLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNG 359
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D+Y G++ AR +FD+++ D WT +I G + G+ + L+ +M+
Sbjct: 360 TALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKV 419
Query: 241 PNS-VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P + + + V++AC+ G A + + D G+ F ++ ++ R G L+ A
Sbjct: 420 PATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESAR 478
Query: 300 EFISNMHAGPTENVWLTLLS----------ACRVHKNVELAG-KVAEKIFMI 340
+ M + T W TL++ A ++K +EL G + +E FM+
Sbjct: 479 QVFDKMSSRDTL-AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMV 529
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 168/312 (53%), Gaps = 9/312 (2%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY- 66
SW +++ A+NG Y AL++ ++M +L+P+ ++VL A + +GK IH
Sbjct: 91 SWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRI 147
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ GL +V + +SL+ MYAKC +ED+ RLF + + SWN++IA Q+G F+E
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEA 207
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
++ + M ++P +F+S++ AC++L L G+++H I G + ++ + ++LL M
Sbjct: 208 IRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTM 264
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+C + A IF ++ D+VSW+A+I A +AI + +M+ +GV+PN F
Sbjct: 265 YARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTF 324
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+VL AC+ G + + + + + G + + A+ DL G L EA +
Sbjct: 325 ASVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383
Query: 307 AGPTENVWLTLL 318
E +W L+
Sbjct: 384 -NRDEGLWTVLI 394
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D+ ++IH I ANV +G+ ++ Y KC V + F + K+ SW S++
Sbjct: 39 DLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLT 97
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFD 174
QNG + L +++M ++P V +++++ ACA + L GK +H I G
Sbjct: 98 AYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLK 154
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++ + +SLL MYAKCG++ A+ +F++M + SW A+I A G+ +AI L+E M
Sbjct: 155 LDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 214
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ V+P+ F +VL+ACS+ GL+D+
Sbjct: 215 D---VEPSVRTFTSVLSACSNLGLLDQG 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+Q+H I N+F+ + ++ Y KCG++ AR FD + + SW +++ A +
Sbjct: 44 RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQN 102
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI------ 275
G+ A+ L+++M+ ++PN V + VL AC+ +++ + + ++ G+
Sbjct: 103 GHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVIL 159
Query: 276 -------------------------APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPT 310
S + A+ ++G +EA +M P+
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPS 219
Query: 311 ENVWLTLLSAC 321
+ ++LSAC
Sbjct: 220 VRTFTSVLSAC 230
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 316/546 (57%), Gaps = 33/546 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKG 60
P D+ +++++ ++ + E AL I+R M + + L PD F +SSV +FA G
Sbjct: 147 PRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLG 206
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + + + + + SSL++MY KC +D ++F + K+++ W ++++G N
Sbjct: 207 RQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASN 266
Query: 121 GLFDEGLKFFRQM--------------------------LIAKIKPRHVS------FSSI 148
G +E L+ FR M L +++ V S +
Sbjct: 267 GRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIV 326
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ A L LG+QLHG +R GF NM + ++L+DMY+KC +I AR +F+ + D+
Sbjct: 327 IGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDV 386
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWT +++G A HG A +A++L+++M G KPN V FV ++ ACSHAGL+ K F S
Sbjct: 387 ISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFES 446
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M +YGI P +HY DLL R+G L EA E ++ M P E W LLSAC +K+ E
Sbjct: 447 MKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAE 506
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+ ++++K+ + P + Y++LSN YA +W A +R M ++K P SWIE
Sbjct: 507 MCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAG 566
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
+ F AG+ I L+E++ M + GYVPDT V+HD+EE +K++ L+ HSE
Sbjct: 567 REFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEKEHHLFLHSE 626
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
RLA+ FG+I +P G+ IR++KNLRVC DCHT +K IS+I R+I+VRD+SRFHHFE GKC
Sbjct: 627 RLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSRFHHFEGGKC 686
Query: 509 SCGDYW 514
SC ++W
Sbjct: 687 SCSEFW 692
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/521 (40%), Positives = 322/521 (61%), Gaps = 11/521 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYE----EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
MP D VSWN+ I LA+ YE +AL +M +P+ T ++L + +
Sbjct: 618 MPEYDQVSWNSFIGALAK---YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSV 674
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
+ G +IH +++ + + I ++L+ Y KC ++ED +F + + D +SWNS+I+
Sbjct: 675 LGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + +G+ + + M+ K +F++++ ACA + TL G ++H C +R +
Sbjct: 735 GYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLES 794
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++ + S+L+DMYAKCG I A F+ M + +I SW ++I G A HG+ A+ +F +M+
Sbjct: 795 DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMK 854
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
+ G P+ V FV VL+ACSH GL+D+ + +F SM + YG++P EH++ + DLLGRAG +
Sbjct: 855 QHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 914
Query: 296 QEAYEFISNMHAGPTENVWLTLLSA-CRVH-KNVELAGKVAEKIFMIDPNNMGAYVILSN 353
++ +FI M P +W T+L A CR + +N EL + A+ + ++P N YV+LSN
Sbjct: 915 KKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSN 974
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
+AA W+D R+ MR +KK CSW+ +K+ + FVAGD++HP +I E LKE
Sbjct: 975 MHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKE 1034
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
L+ ++ GYVP+TK L+D+E E K+ LL YHSE+LAI F ++ IRI+KNLRV
Sbjct: 1035 LMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRV 1093
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CGDCHTA K+ISKIV R+II+RD++RFHHF G CSCGDYW
Sbjct: 1094 CGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 172/347 (49%), Gaps = 22/347 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSWN++I GL N +EEA++ M + P +F++ S L + + G
Sbjct: 517 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ- 119
++IHG + GLD +V + ++L+ +YA+ + + ++F +P D +SWNS I +
Sbjct: 577 RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKY 636
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ LK+F +M+ A +P V+F +I+ A + + L LG Q+H I++ D+ I
Sbjct: 637 EASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAI 696
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++LL Y KC + IF +M + D VSW ++I G G H A+ L M + G
Sbjct: 697 ENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG 756
Query: 239 VKPNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
K + F VL+AC+ +++ A + + D + +A+ D+ + G
Sbjct: 757 QKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVG------SALVDMYAKCG 810
Query: 294 KLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
K+ A F M P N+ W +++S H + G+ A KIF
Sbjct: 811 KIDYASRFFELM---PVRNIYSWNSMISGYARHGH----GQKALKIF 850
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 174/320 (54%), Gaps = 8/320 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI----KGKE 62
V+ N ++VGLAR EEA + ++M ++ ++ +S +L +L F ++ ++ KG+E
Sbjct: 418 VTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQE 476
Query: 63 IHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H Y R GL DA + IG++L+NMY KC ++++ +F L+P KD +SWNS+I+G N
Sbjct: 477 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 536
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F+E + F M + P + S S + +C+ L L LG+Q+HG + G D ++ +++
Sbjct: 537 RFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSN 596
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH-GNAHDAISLFEQMEKDGVK 240
+LL +YA+ +I + +F +M +D VSW + I A + + A+ F +M + G +
Sbjct: 597 ALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWR 656
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L A S ++ +++ Y +A A+ G+ ++++
Sbjct: 657 PNRVTFINILAAVSSFSVLGLG-HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEI 715
Query: 301 FISNMHAGPTENVWLTLLSA 320
S M E W +++S
Sbjct: 716 IFSRMSERRDEVSWNSMISG 735
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 159/318 (50%), Gaps = 30/318 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD--YVDVI 58
MP +LVSW+ +I G +N + +EA ++ + + + L P+ F + S L +
Sbjct: 201 MPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIK 260
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCA-RVEDSHRLFCLLPVKDAISWNSIIAGC 117
G +IH + + +++ + + L++MY+ C+ ++D+HR+F + +++++WNSII+
Sbjct: 261 LGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVY 320
Query: 118 VQNGLFDEGLKFFRQMLIA----KIKPRHVSFSSIMPACAHLTT--LHLGKQLHGCIIRN 171
+ G K F M + ++P + S++ A L L L +Q+ I ++
Sbjct: 321 CRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKS 380
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
GF ++++ S+L++ +A+ G + A+ IF +M + V+ +++G A +A +F
Sbjct: 381 GFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVF 440
Query: 232 EQMEKDGVKPNSVAFVAVLTACSH--------------------AGLIDKAWSYFNSMTK 271
++M KD V+ NS + V +L+ + +GL+D S N++
Sbjct: 441 KEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVN 499
Query: 272 DYGIAPSFEHYAAVADLL 289
YG + ++ +V L+
Sbjct: 500 MYGKCTAIDNACSVFQLM 517
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 138/299 (46%), Gaps = 8/299 (2%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + G +V ++LIN+Y + + + +LF +P K+ +SW+ +I+G QN +
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCIIRNGFDDNMFIA 180
DE F+ ++ + + P H + S + AC T + LG Q+H I + +M ++
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281
Query: 181 SSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ MY+ C G+I A +FD++ + V+W ++I G+A A LF M+ +GV
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 240 ----KPNSVAFVAVLT-ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+PN +++T ACS A + + G +A+ + R G
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
+ A M+ + ++ R H+ E A E +++ N+ V+LS
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLST 460
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
++L+ LH + + GF D++F ++L+++Y + GN+ AR +FD+M ++VSW+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
G + +A SLF+ + G+ PN A + L AC G
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/511 (38%), Positives = 310/511 (60%), Gaps = 36/511 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVSWN +I G A+NG E+ + ++ QM PD T+S++
Sbjct: 220 NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI----------------- 262
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I Y +C RV+++ R+F KD + W +++ G +NG +
Sbjct: 263 ------------------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREE 304
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L F +ML+ I+P + SS++ +CA L +LH G+ +HG I G ++N+ ++S+L+
Sbjct: 305 DALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALI 364
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG I AR +F+ M ++VSW A+I+G A +G+ DA+ LFE M + KP++V
Sbjct: 365 DMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNV 424
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L+AC H I++ YF+S+T +G+ P+ +HYA + +LLGR G++++A I N
Sbjct: 425 TFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKN 484
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W TLLS C ++ A A +F +DP Y++LSN YA+ RWKD
Sbjct: 485 MAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDV 544
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R M++K +KK SWIE+ N+ + F + D++HP I E L L+ ++++EG+
Sbjct: 545 ASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFT 604
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG-TTIRIIKNLRVCGDCHTAIKF 483
P+T VLHDV E++K + +HSE+LA+ FG+I P+G + IRIIKN+R+C DCH +KF
Sbjct: 605 PNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKF 664
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S+I+ R+II+RD++RFHHF GKCSC D W
Sbjct: 665 ASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 53/361 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+NT I G + N +E+L + ++M +P +T+ S+L A D+ G
Sbjct: 115 MPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYG 174
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG I NV I ++L +MYAKC +E + LF L K+ +SWN +I+G +N
Sbjct: 175 KQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKN 234
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ + QM ++ P V+ S+I+ A
Sbjct: 235 GQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----------------------------- 265
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
Y +CG + AR +F + DIV WTA+++G A +G DA+ LF +M + ++
Sbjct: 266 ------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319
Query: 241 PNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
P+S +V+++C+ H G S + + ++ +A+ D+ + G +
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVS------SALIDMYSKCGFI 373
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
+A + M PT NV W ++ C + + + A ++ E + P+N+ IL
Sbjct: 374 DDARSVFNLM---PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGIL 430
Query: 352 S 352
S
Sbjct: 431 S 431
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 190/427 (44%), Gaps = 36/427 (8%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-DSFTLSSVLPIFADYVDVIKGKEIHGY 66
++ +++ R +A + M + +P DSF + +L ++A + + + +
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ ++ ++L++ YAK +++ F +P +D++S+N+ IAG N E
Sbjct: 84 MLKR----DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ F++M +P + SI+ A A L+ L GKQ+HG II F N+FI ++L DM
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG I AR +FD + ++VSW +I G A +G I L QM G P+ V
Sbjct: 200 YAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM- 305
++ A G +D+A F+ + + + A+ + G+ ++A + M
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVC-----WTAMMVGYAKNGREEDALLLFNEML 314
Query: 306 --HAGPTENVWLTLLSAC----RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
H P +++S+C +H + GK I NN+ L + Y+
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK---SILAGLNNNLLVSSALIDMYSKCG 371
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
DA S+ M + + SW A H +AL EL E M
Sbjct: 372 FIDDARSVFNLMPTRNV-----VSW-----NAMIVGCAQNGHD-----KDAL-ELFENML 415
Query: 420 QEGYVPD 426
Q+ + PD
Sbjct: 416 QQKFKPD 422
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/518 (38%), Positives = 321/518 (61%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D +N+VI ++ L + R+M + N+ P ++T +SV+ AD + G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H +A+ G + + ++L+ Y+KC +E + ++F +P K ++WNS+++G QN
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQN 186
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL ++ ++ F QM + +P +F S++ ACA + LG +H I+ G D N+ +
Sbjct: 187 GLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLG 246
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GV 239
++L+++Y++CG++ AR +FDKM ++ +WTA+I HG A+ LF +ME D G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGS 306
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN+V FVAVL+AC+HAGL++ S + MT+ Y + P EH+ + D+LGRAG L EAY
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAY 366
Query: 300 EFISNMHA---GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
FI + A +W +L AC++H+N +L ++A+++ ++P N G +V+LSN YA
Sbjct: 367 RFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYA 426
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ + + + +R M ++K S IEV+NK Y F GD+SH I L+ L+
Sbjct: 427 LSGKTDEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLIS 486
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R ++ GY P ++EV+H VEEE+K+ L YHSE+LA+ FG++ T D + I ++KNLR+C D
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-SAITVVKNLRICED 545
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K+IS + R+IIVRD RFHHF++G CSC DYW
Sbjct: 546 CHSAFKYISIVSNRQIIVRDKLRFHHFQNGSCSCLDYW 583
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 316/511 (61%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SW TVI G A+N + EAL + R + ++ D L S+L + ++ KEIH
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +R GL + I + L+++Y KC + + R+F + KD +SW S+I+ NG
Sbjct: 511 CHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ FR+M+ + V+ I+ A A L+ L+ G+++H ++R GF IA +++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYA CG+++ A+ +FD+++ ++ +T++I +HG A+ LF++M + V P+ +
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+F+A+L ACSHAGL+D+ + M +Y + P EHY + D+LGRA + EA+EF+
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT VW LL+ACR H E+ A+++ ++P N G V++SN +A RW D
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE-GY 423
+R M+ GM+K P CSWIE+ K + F A DKSHP I E L E+ ++E+E GY
Sbjct: 810 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGY 869
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V DTK VLH+V+E +K +L+ HSER+AI +G++ TPD +RI KNLRVC DCHT K
Sbjct: 870 VADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKL 929
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SK+ +R+I++RD +RFHHFE G CSCGD W
Sbjct: 930 VSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 148/249 (59%), Gaps = 1/249 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +D+V+WN++I G +N +Y+EAL M K D +++S++ +++ G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+H Y I+HG D+N+ +G++LI+MY+KC R F + KD ISW ++IAG QN
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ FR + +++ + SI+ A + L ++ + K++H I+R G D + I
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 524
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D+Y KC N+ A +F+ + D+VSWT++I +AL+GN +A+ LF +M + G+
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 241 PNSVAFVAV 249
+SVA + +
Sbjct: 585 ADSVALLCI 593
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 137/253 (54%), Gaps = 5/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V WN+++ + +G E L + R+M P+S+T+ S L + GKEIH
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 65 GYAIR---HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++ H + VC ++LI MY +C ++ + R+ + D ++WNS+I G VQN
Sbjct: 308 ASVLKSSTHSSELYVC--NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++ E L+FF M+ A K VS +SI+ A L+ L G +LH +I++G+D N+ + +
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+DMY+KC F +M D++SWT VI G A + +A+ LF + K ++
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 242 NSVAFVAVLTACS 254
+ + ++L A S
Sbjct: 486 DEMILGSILRASS 498
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ L+ MY KC ++D+ ++F +P + A +WN++I V NG L + M +
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG 177
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ SF +++ ACA L + G +LH +++ G+ FI ++L+ MYAK ++ AR
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 237
Query: 198 CIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+FD + D V W +++ + G + + + LF +M G PNS V+ LTAC
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
S+ K + A+ + R GK+ +A + M+
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +WNT+I NG AL + M + + ++L A D+ G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
E+H ++ G + I ++L++MYAK + + RLF K DA+ WNSI++
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMF 178
+G E L+ FR+M + P + S + AC + LGK++H ++++ ++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MY +CG + A I +M+ D+V+W ++I G + +A+ F M G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 239 VKPNSVAFVAVLTA 252
K + V+ +++ A
Sbjct: 382 HKSDEVSMTSIIAA 395
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNS-------IIAGCVQNGLFDEGL-KFFRQMLIA 136
MY+ A RL C +P + + N + + FD L + F+++ ++
Sbjct: 15 MYSASAISFPRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVS 74
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMFIASSLLDMYAKCGNIR 194
+ +F+ ++ C + G+QLH I + F+ + F+A L+ MY KCG++
Sbjct: 75 ENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLD 133
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +FD+M +W +I +G A++L+ M +GV +F A+L AC
Sbjct: 134 DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC- 192
Query: 255 HAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
A L D ++ S +S+ G + A+ + + L A +
Sbjct: 193 -AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 314 WLTLLSA 320
W ++LS+
Sbjct: 252 WNSILSS 258
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 302/485 (62%), Gaps = 2/485 (0%)
Query: 31 QMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
+M + PD++T S+L A +G++ HG A++ G + + +LINMYA+C
Sbjct: 128 RMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECG 187
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
V + +F + + +S+N++I V++ L E L FR+M +KP V+ S++
Sbjct: 188 DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLS 247
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACA L L LG+ +H I + D + + ++L+DMYAKCG++ A +F M+ D +
Sbjct: 248 ACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA 307
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W+ +++ A HG +AIS+FE+M+K G+KP+ V F+ VL ACSH+G++ + YF+SM
Sbjct: 308 WSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSM- 366
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
++YGI +HY V DLL R+G+L+ AY+FI + PT +W TLLSAC H +V++
Sbjct: 367 REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMG 426
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
+V E+I +D ++ G YVI SN A RW++ +R M KG+ K P CS IE+ N
Sbjct: 427 KRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNM 486
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLH-DVEEEQKKNLLYYHSER 449
+ F AGD SHP + E++E+++ GYVP+T V H ++ EE+K L YHSE+
Sbjct: 487 VHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEK 546
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FG++ T GTT+RI+KNLRVC DCH+ K +S + R II+RD +RFHHFEDG CS
Sbjct: 547 LAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCS 606
Query: 510 CGDYW 514
CGDYW
Sbjct: 607 CGDYW 611
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +W+ ++V A +G EA+++ +M +KPD T VL + V +G
Sbjct: 300 MESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEG 359
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
+ +G+ + + + ++ A+ ++E +++ LP+K AI W ++++ C
Sbjct: 360 LQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 120 NGLFDEGLKFFRQML 134
+G D G + F ++L
Sbjct: 420 HGDVDMGKRVFERIL 434
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/505 (41%), Positives = 310/505 (61%), Gaps = 17/505 (3%)
Query: 20 GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIG 79
GLY+ M + L P FT+S L + +G IH +A HG +N+ +
Sbjct: 5 GLYD-------SMQSHGLFPSDFTISVALSSCSSLKSFERGARIHRWADEHGYGSNLLVQ 57
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDA---ISWNSIIAGCVQNGLFDEGLKFFRQMLI- 135
++L+N YAKC+++ ++ +LF + + + +SW+++I +G E L F +M
Sbjct: 58 NALVNFYAKCSKIPEAMKLFGEMSERTSRTVVSWSAMIGAYALHGRGQEALLLFHRMRKD 117
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF--DDNMFIASSLLDMYAKCGNI 193
+++P ++F+ + AC + L G+++H + +G + + ++LL+M+ + G++
Sbjct: 118 GRVEPNAMTFTGVFNACGVVEDLEQGREIHALAMASGELKSSSPILENALLNMFVRFGSL 177
Query: 194 RLARCIFDKMDLHDI----VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
AR +FD MD D VSWTA+I A HG +A+ LF++M +G+ ++ F+ V
Sbjct: 178 EEARKVFDAMDHPDAFSNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICV 237
Query: 250 LTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGP 309
L ACSHAGLI ++ +F+SM +DY IAP+ HY D +GRAG+LQ+A E I +M P
Sbjct: 238 LRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHP 297
Query: 310 TENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRV 369
W TLL+ACR+H E A KVAE + + P + AY +L N YAA R+ D +R
Sbjct: 298 ETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRK 357
Query: 370 FMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKE 429
M ++G+KK P S+IEVKNK + FVAGD++HP I L++L RM + GYVP+TK+
Sbjct: 358 SMTDRGLKKVPRKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKD 417
Query: 430 VLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQ 489
VLH V EE+K+ L+ HSE+LAI FG+I TP GT + I+KNLRVC DCH A K I+KI++
Sbjct: 418 VLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMR 477
Query: 490 REIIVRDNSRFHHFEDGKCSCGDYW 514
R I+VRD RFHH EDG+CSC DYW
Sbjct: 478 RRIVVRDTHRFHHLEDGQCSCKDYW 502
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 119/245 (48%), Gaps = 19/245 (7%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+VSW+ +I A +G +EAL + +M + ++P++ T + V D+ +G+EIH
Sbjct: 88 VVSWSAMIGAYALHGRGQEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDLEQGREIH 147
Query: 65 GYAIRHG--LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA----ISWNSIIAGCV 118
A+ G ++ + ++L+NM+ + +E++ ++F + DA +SW ++IA
Sbjct: 148 ALAMASGELKSSSPILENALLNMFVRFGSLEEARKVFDAMDHPDAFSNSVSWTAMIAALA 207
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q+G DE L+ F++M + + +F ++ AC+H + + ++ ++
Sbjct: 208 QHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMV-----EDYA 262
Query: 179 IASS------LLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLF 231
IA + LD + G ++ A + M H + V+W ++ +H A A +
Sbjct: 263 IAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVTWKTLLNACRIHSQAERATKVA 322
Query: 232 EQMEK 236
E + K
Sbjct: 323 ELLAK 327
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE- 62
S+ VSW +I LA++G +EAL + ++M + D+ T VL + + + E
Sbjct: 194 SNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEF 253
Query: 63 ----IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGC 117
+ YAI + + C ++ + R++D+ L +P + ++W +++ C
Sbjct: 254 FHSMVEDYAIA-PTETHYC---RALDTIGRAGRLQDAEELIHSMPFHPETVTWKTLLNAC 309
Query: 118 VQNGLFDEGLKFFRQMLIAKIKP 140
+ + K L+AK+ P
Sbjct: 310 RIHSQAERATKVAE--LLAKLAP 330
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 308/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L +WN I +G +EA+ + + +P+S T L +D + + G
Sbjct: 169 IPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG R G D +V + + LI+ Y KC ++ S +F + +K+A+SW S++A VQN
Sbjct: 229 MQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + + ++ SS++ ACA + L LG+ +H ++ + N+F+
Sbjct: 289 HEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVG 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV- 239
S+L+DMY KCG I + FD+M ++V+ ++I G A G A++LFE M G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCG 408
Query: 240 -KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN + FV++L+ACS AG ++ F+SM YGI P EHY+ + D+LGRAG +++A
Sbjct: 409 PAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQA 468
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+EFI M PT +VW L +ACR+H L AE +F +DP + G +V+LSNT+AAA
Sbjct: 469 FEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW +A ++R M+ G+KK SWI VKN+ +AF A D+SH I L +L +M
Sbjct: 529 GRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKM 588
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E GY PD K L+D+EEE+K + +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCH 648
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KF+S V+REIIVRDN+RFH F+DG CSC DYW
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++VSW +++ GLA+NG + AL +M + P+ FT V A + GK
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGK 128
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH A++ G +V +G S +MY K +D+ +LF +P ++ +WN+ I+ V +G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDG 188
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E ++ F + +P ++F + AC+ L LG Q+HG + R+GFD ++ + +
Sbjct: 189 RPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYN 248
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D Y KC IR + IF +M + + VSW +++ + A L+ + K+ V+
Sbjct: 249 GLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVET 308
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +VL+AC+ ++ S K + + +A+ D+ G+ G ++++ +
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERNIFVGSALVDMYGKCGCIEDSEQA 367
Query: 302 ISNMHAGPTENV 313
M P +N+
Sbjct: 368 FDEM---PEKNL 376
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 4/244 (1%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + LINMY+K E + + L P ++ +SW S+++G QNG F L F +M
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREG 103
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ P +F + A A L GKQ+H ++ G ++F+ S DMY K AR
Sbjct: 104 VAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+FD++ ++ +W A I + G +AI F + + G +PNS+ F L ACS
Sbjct: 164 KLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGL 223
Query: 258 LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-WLT 316
L+D + + G Y + D G+ +++ + + M G V W +
Sbjct: 224 LLDLGMQ-MHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEM--GMKNAVSWCS 280
Query: 317 LLSA 320
L++A
Sbjct: 281 LVAA 284
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 156 TTLHLGKQLHGCIIRN-GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+++ LG+ +H I++ F+A+ L++MY+K + AR + ++VSWT++
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ G A +G+ A+ F +M ++GV PN F V A
Sbjct: 80 VSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKA 117
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 318/518 (61%), Gaps = 6/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVI 58
+P WN VI G A + A+ R M N + D+ T S L A +
Sbjct: 61 IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ ++H +R G +A+V + ++L++ YAK ++ + +LF +P D SWN++IAG
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180
Query: 119 QNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
Q + + F++M + ++P V+ + AC+ L L G+ +H I+ D N+
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNV 240
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + ++DMYAKCG++ A +F+ M +++W +IM A+HG+ H A+ LFE++ +
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ P++V+++AVL AC+HAGL++ FNSMT+ G+ P+ +HY ++ DLLGRAG+L+
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLK 359
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EAY+ +S++ P +W TLL ACR + +VE+A + K+ + + G +V+LSN YA
Sbjct: 360 EAYDIVSSL-PFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYA 418
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A +RW D +R MR + +KKTP S+IE+K K Y FV GD+SH I L E+
Sbjct: 419 ARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINL 478
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R++ GY DT VLHD+ +E K+N L YHSE+LA+ FG+ CT +GT I++IKNLR+CGD
Sbjct: 479 RIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGD 538
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH IK ISKI REIIVRD +RFH F++G CSC DYW
Sbjct: 539 CHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/516 (39%), Positives = 308/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L +WN I +G EA+ + ++ P+S T + L +D++ + G
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG +R G D +V + + LI+ Y KC ++ S +F + K+A+SW S++A VQN
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + + ++ SS++ ACA + L LG+ +H ++ + +F+
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV- 239
S+L+DMY KCG I + FD+M ++V+ ++I G A G A++LFE+M G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 240 -KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN + FV++L+ACS AG ++ F+SM YGI P EHY+ + D+LGRAG ++ A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
YEFI M PT +VW L +ACR+H +L AE +F +DP + G +V+LSNT+AAA
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW +A ++R ++ G+KK SWI VKN+ +AF A D+SH I L +L M
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E GY PD K L+D+EEE+K + +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 648
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KF+S V+REIIVRDN+RFH F+DG CSC DYW
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++VSW ++I GLA+NG + AL +M + P+ FT A + GK
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH A++ G +V +G S +MY K +D+ +LF +P ++ +WN+ I+ V +G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E ++ F + P ++F + + AC+ L+LG QLHG ++R+GFD ++ + +
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D Y KC IR + IF +M + VSW +++ + A L+ + KD V+
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +VL+AC+ ++ S K + + +A+ D+ G+ G ++++ +
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 302 ISNMHAGPTENV 313
M P +N+
Sbjct: 368 FDEM---PEKNL 376
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 87/177 (49%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + LINMY+K E + + L P ++ +SW S+I+G QNG F L F +M
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG 103
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ P +F A A L GKQ+H ++ G ++F+ S DMY K AR
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+FD++ ++ +W A I + G +AI F + + PNS+ F A L ACS
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 156 TTLHLGKQLHGCIIRN-GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+++ LG+ +H I++ F+A+ L++MY+K + AR + ++VSWT++
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
I G A +G+ A+ F +M ++GV PN F A
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKA 117
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 328/563 (58%), Gaps = 49/563 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV---RQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + SWNT+I G + + + + I M + ++P+ FT SVL A +
Sbjct: 78 MPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKI 137
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED----------------------- 94
+GK+IHG A+++G + + S+L+ MY C ++D
Sbjct: 138 QQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKR 197
Query: 95 ----------------------SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ LF + + +SWN++I+G QNG F + ++ FR+
Sbjct: 198 DGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFRE 257
Query: 133 MLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
M + I+P +V+ S++PA + L +L LG+ LH +G + + S+L+DMY+KCG
Sbjct: 258 MKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 317
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
I A +F+++ ++++W+A+I G A+HG A DAI F +M + GV+P+ VA++ +LT
Sbjct: 318 IIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 377
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTE 311
ACSHAGL+++ YF+ M G+ P EHY + DLLGR G L EA EFI NM P +
Sbjct: 378 ACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDD 437
Query: 312 NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFM 371
+W LL ACR+H+NVE+ +VA + + P++ GAYV LSN YA+ W + + +R+ M
Sbjct: 438 VIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 497
Query: 372 RNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVL 431
+ ++K P CSWI++ + F+ D SHP IN L E+ +++ GY P T +VL
Sbjct: 498 KEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVL 557
Query: 432 HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQRE 491
++EEE K+N L+YHSE++A FG+I T G IRI+KNLR+C DCH++IK ISK+ +R+
Sbjct: 558 LNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRK 617
Query: 492 IIVRDNSRFHHFEDGKCSCGDYW 514
I VRD RFHHF+DG CSC DYW
Sbjct: 618 ITVRDRKRFHHFQDGSCSCMDYW 640
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 148/338 (43%), Gaps = 65/338 (19%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKC----ARVEDSHRLFC 100
SS+ P + +IH I+ G + + ++ A ++ +H++F
Sbjct: 17 SSLFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFN 76
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDE-----GLKFFRQMLIAK-IKPRHVSFSSIMPACAH 154
+P ++ SWN+II G ++ DE + F +M+ + I+P +F S++ ACA
Sbjct: 77 QMPQRNCFSWNTIIRGFSES---DEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAK 133
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC------------------------ 190
+ GKQ+HG ++ GF + F+ S+L+ MY C
Sbjct: 134 TGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMID 193
Query: 191 ---------------------GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
G+ + AR +FDKM +VSW +I G + +G DA+
Sbjct: 194 RRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVE 253
Query: 230 LFEQMEK-DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F +M+K + ++PN V V+VL A S G ++ + + +D GI +A+ D+
Sbjct: 254 VFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDM 312
Query: 289 LGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
+ G +++A + P ENV W +++ +H
Sbjct: 313 YSKCGIIEKAIMVFERL---PRENVITWSAMINGFAIH 347
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 302/485 (62%), Gaps = 2/485 (0%)
Query: 31 QMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
+M + PD++T S+L A +G++ HG A++ G + + +LINMYA+C
Sbjct: 128 RMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECG 187
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
V + +F + + +S+N++I V++ L E L FR+M +KP V+ S++
Sbjct: 188 DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLS 247
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACA L L LG+ +H I + D + + ++L+DMYAKCG++ A +F M+ D +
Sbjct: 248 ACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA 307
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W+ +++ A HG +AIS+FE+M+K G+KP+ V F+ VL ACSH+G++ + YF+SM
Sbjct: 308 WSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSM- 366
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
++YGI +HY V DLL R+G+L+ AY+FI + PT +W TLLSAC H +V++
Sbjct: 367 REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMG 426
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
+V E+I +D ++ G YVI SN A RW++ +R M KG+ K P CS IE+ N
Sbjct: 427 KRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNM 486
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLH-DVEEEQKKNLLYYHSER 449
+ F AGD SHP + E++E+++ GYVP+T V H ++ EE+K L YHSE+
Sbjct: 487 VHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEK 546
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FG++ T GTT+RI+KNLRVC DCH+ K +S + R II+RD +RFHHFEDG CS
Sbjct: 547 LAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCS 606
Query: 510 CGDYW 514
CGDYW
Sbjct: 607 CGDYW 611
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +W+ ++V A +G EA+++ +M +KPD T VL + V +G
Sbjct: 300 MESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEG 359
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
+ +G+ + + + ++ A+ ++E +++ LP+K AI W ++++ C
Sbjct: 360 LQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 120 NGLFDEGLKFFRQML 134
+G D G + F ++L
Sbjct: 420 HGDVDMGKRVFERIL 434
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/516 (39%), Positives = 308/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L +WN I +G EA+ + ++ P+S T + L +D++ + G
Sbjct: 119 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG +R G D +V + + LI+ Y KC ++ S +F + K+A+SW S++A VQN
Sbjct: 179 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + + ++ SS++ ACA + L LG+ +H ++ + +F+
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV- 239
S+L+DMY KCG I + FD+M ++V+ ++I G A G A++LFE+M G
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358
Query: 240 -KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN + FV++L+ACS AG ++ F+SM YGI P EHY+ + D+LGRAG ++ A
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
YEFI M PT +VW L +ACR+H +L AE +F +DP + G +V+LSNT+AAA
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 478
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW +A ++R ++ G+KK SWI VKN+ +AF A D+SH I L +L M
Sbjct: 479 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 538
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E GY PD K L+D+EEE+K + +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 539 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 598
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KF+S V+REIIVRDN+RFH F+DG CSC DYW
Sbjct: 599 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++VSW ++I GLA+NG + AL +M + P+ FT A + GK
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 78
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH A++ G +V +G S +MY K +D+ +LF +P ++ +WN+ I+ V +G
Sbjct: 79 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 138
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E ++ F + P ++F + + AC+ L+LG QLHG ++R+GFD ++ + +
Sbjct: 139 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 198
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D Y KC IR + IF +M + VSW +++ + A L+ + KD V+
Sbjct: 199 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 258
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +VL+AC+ ++ S K + + +A+ D+ G+ G ++++ +
Sbjct: 259 SDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQA 317
Query: 302 ISNMHAGPTENV 313
M P +N+
Sbjct: 318 FDEM---PEKNL 326
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY+K E + + L P ++ +SW S+I+G QNG F L F +M + P +
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F A A L GKQ+H ++ G ++F+ S DMY K AR +FD++
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
++ +W A I + G +AI F + + PNS+ F A L ACS
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 170
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 313/518 (60%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW +++ G G + AL + +M + P+ FTL++V+ + D+ G
Sbjct: 67 MHEPNVVSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + GL N+ + SSL++MY KC V+ + +F + ++ +SW ++IAG QN
Sbjct: 127 KMVHAHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQN 186
Query: 121 GLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E L+ FR+ + +P H +S++ ACA L L GK HG +IR G++ N +
Sbjct: 187 GKGYEALEVFREFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVV 246
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+DMYAKCG+ + +F ++ ++ +T++I+G A +G +++LFE+M V
Sbjct: 247 ASALVDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKV 306
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V FV +L ACSH+GL+D+ NSM + +G+ P HY V D+L R G+L EAY
Sbjct: 307 MPNDVTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAY 366
Query: 300 EFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
+ ++ P E +W TLLS+ R+H V++A + ++ + + GAYV LSNTY
Sbjct: 367 KLAKSIRVNPNEGALLWGTLLSSSRLHGRVDMAVEASKWLIEYNQQVAGAYVTLSNTYTL 426
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A W++A SLR M G+ K P CSWIE+K+ Y F AGD S + L+EL R
Sbjct: 427 AGEWENAHSLRTEMELVGVHKEPGCSWIEIKDSIYVFYAGDLSCERGDEVISLLRELERR 486
Query: 418 MEQEGYV-PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
M + G V T V DVE+E K+ ++ HSERLA+ FG+I P G TIR++KNLR+C D
Sbjct: 487 MMERGCVGGSTGLVFVDVEQEVKEKIVGLHSERLALAFGLISIPKGVTIRVMKNLRICSD 546
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH A K ISKIV+R+ +VRD +RFHHF+DG C+C D+W
Sbjct: 547 CHEAFKLISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D I H + GL + + L+N Y + R++ +H LF + + +SW S+++
Sbjct: 21 DFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNVVSWTSLMS 80
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V G L + +M +++ P + ++++ +C+ L L GK +H + G
Sbjct: 81 GYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMVHAHVQILGLQG 140
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ + SSL+DMY KC ++ AR +FD M ++VSWTA+I G A +G ++A+ +F +
Sbjct: 141 NLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEALEVFREFS 200
Query: 236 KDGV-KPNSVAFVAVLTACSHAG 257
+ +PN +V+ AC+ G
Sbjct: 201 SYMMERPNHFMLASVINACASLG 223
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/426 (44%), Positives = 285/426 (66%), Gaps = 1/426 (0%)
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
A E ++++F L+P KD ++WNS+I G NG +E L +++M ++P + S++
Sbjct: 55 AYFESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLL 114
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DI 208
ACA L TL LG++ H +++ G + N+ ++LLD+YAKCG I AR IFD+M + ++
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNV 174
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSWT++I+G A++G +A+ F+ ME++G+ P+ + FV VL ACSH G++++ + YF
Sbjct: 175 VSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKR 234
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M + Y I P EHY + DLLGRAG L+EAY++I +M P +W TLL AC +H ++
Sbjct: 235 MKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLG 294
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
L ++ ++P + G YV+LSN YA+ +RW D +R M ++G++KTP S +E+
Sbjct: 295 LGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELG 354
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
N + FV GD++HP I + L E+ +++ GYVP T VL D+EEE+K++ L+YHSE
Sbjct: 355 NHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSE 414
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
++AI F +I T GT IRIIKNLRVC DCH AIK ISK+ +R+I+VRD SRFHHF DG C
Sbjct: 415 KIAIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSC 474
Query: 509 SCGDYW 514
SC DYW
Sbjct: 475 SCRDYW 480
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 124/227 (54%), Gaps = 5/227 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+WN+VI G A NG EAL + ++MG+ ++PD FT+ S+L A+ ++ G
Sbjct: 67 MPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
+ H Y ++ GL+ N+ ++L+++YAKC + ++ ++F + + ++ +SW S+I G
Sbjct: 127 RRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAV 186
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG E L+ F+ M + P ++F ++ AC+H ++ G + ++ +D I
Sbjct: 187 NGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFK-RMKEQYDIVPRI 245
Query: 180 A--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G ++ A M L + V W ++ +HG+
Sbjct: 246 EHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGH 292
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 316/542 (58%), Gaps = 32/542 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L +N +I G + + E + + + L PD+ T ++ A + G + H
Sbjct: 81 NLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTH 140
Query: 65 GYAIRHGLDANVCIGSSLINMYA-------------------------------KCARVE 93
G AI+HG + + + +SL++MYA +C +
Sbjct: 141 GQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAK 200
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ LF +P ++ ++W+++I+G +N F++ ++ F + + ++ +CA
Sbjct: 201 SARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCA 260
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
HL L +G++ H ++RN N+ + ++++DMYA+CGN+ A +F+++ D++ WTA
Sbjct: 261 HLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTA 320
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A+HG A A+ F +M K G P + F AVLTACSHAG++++ F SM +D+
Sbjct: 321 LIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDH 380
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G+ P EHY + DLLGRAGKL++A +F+ M P +W LL ACR+HKNVE+ +V
Sbjct: 381 GVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERV 440
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
+ + + P G YV+LSN YA A +WKD +R M++KG++K P S IE+ K +
Sbjct: 441 GKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHE 500
Query: 394 FVAGDKSHPFYHRINEALKE-LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F GDK+HP +I ++ +L +++ GYV +T E + D++EE+K+ L+ HSE+LAI
Sbjct: 501 FTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAI 560
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
+GI+ T IRI+KNLRVC DCHTA K ISK+ + E+IVRD +RFHHF++G CSC D
Sbjct: 561 AYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMD 620
Query: 513 YW 514
YW
Sbjct: 621 YW 622
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 119/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W+T+I G ARN +E+A+ + + + + V+ A + G
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H Y +R+ L N+ +G+++++MYA+C VE + +F LP KD + W ++IAG +
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ L +F +M PR ++F++++ AC+H + G ++ + R+ G + +
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEH 388
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G +R A KM + + W A++ +H N
Sbjct: 389 YGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKN 433
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/511 (39%), Positives = 319/511 (62%), Gaps = 5/511 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V W ++I G +N EAL + ++M PD T+++++ A+ D+ G ++H +
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH 205
Query: 67 AIRHGLDANVC--IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR +D +C +GS+L+NMYAKC ++ + ++F L KD +W+++I G V+N
Sbjct: 206 -IRE-MDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRST 263
Query: 125 EGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+ FR++ + ++P V+ +++ ACA L L G+ +H I R ++ + +SL
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DM++KCG+I A+ IFD M D++SW +++ G ALHG +A++ F M+ ++P+
Sbjct: 324 IDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDE 383
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ F+ VLTACSHAGL+ + F + YG+ EHY + DLL RAG L EA EFI
Sbjct: 384 ITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIR 443
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P +W ++L ACRV+ N+EL + A + ++P N G Y++LSN YA + W +
Sbjct: 444 VMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNE 503
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R M KG++KTP CS + + N A++F+AGD SHP I+ L+++ E+++ GY
Sbjct: 504 VKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGY 563
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V DT EVL ++++ +K+ + HSE+LA+ +G++ + G I I+KNLRVC DCHT IK
Sbjct: 564 VADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKL 623
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKI QR+I +RD +RFHHF+DG CSC DYW
Sbjct: 624 VSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 164/306 (53%), Gaps = 9/306 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIKGKEI 63
D+++WN+++ + + AL +M + PD FT S+L A ++ GK +
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG +++ L +++ I ++L+NMYA C ++ + LF + ++ + W S+I+G ++N
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L +++M P V+ ++++ ACA L L +G +LH I + S+L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVKPN 242
++MYAKCG+++ AR +FDK+ D+ +W+A+I G + + +A+ LF ++ ++PN
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281
Query: 243 SVAFVAVLTACSHAGLIDKA-W--SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
V +AV++AC+ G ++ W Y K + ++ + ++ D+ + G + A
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN----NSLIDMFSKCGDIDAAK 337
Query: 300 EFISNM 305
+M
Sbjct: 338 RIFDSM 343
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SWN+++ G A +GL EAL R M +L+PD T VL + V +G
Sbjct: 343 MSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402
Query: 61 K----EIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
K EI Y +R + C ++++ + + ++ ++P++ D W S++
Sbjct: 403 KKLFYEIEALYGVRLKSEHYGC----MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458
Query: 115 AGC-VQNG--LFDEGLKFFRQM 133
C V N L +E +F ++
Sbjct: 459 GACRVYNNLELGEEAARFLLKL 480
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 310/511 (60%), Gaps = 36/511 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVSWN +I G A+NG E+ + ++ QM PD T+S++
Sbjct: 220 NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI----------------- 262
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
I Y +C RV+++ R+F KD + W +++ G +NG +
Sbjct: 263 ------------------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREE 304
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L F +ML+ I+P + SS++ +CA L +LH G+ +HG I G ++N+ ++S+L+
Sbjct: 305 DALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALI 364
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KCG I AR +F+ M ++VSW A+I+G A +G+ DA+ LFE M + KP++V
Sbjct: 365 DMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNV 424
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +L+AC H I++ YF+S++ +G+ P+ +HYA + +LLGR G++++A I N
Sbjct: 425 TFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKN 484
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W TLLS C ++ A A +F +DP Y++LSN YA+ RWKD
Sbjct: 485 MAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDV 544
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
AS+R M++K +KK SWIE+ N+ + F + D++HP I E L L+ ++++EG+
Sbjct: 545 ASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFT 604
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG-TTIRIIKNLRVCGDCHTAIKF 483
P+T VLHDV E++K + +HSE+LA+ FG+I P+G + IRIIKN+R+C DCH +KF
Sbjct: 605 PNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKF 664
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S+I+ R+II+RD++RFHHF GKCSC D W
Sbjct: 665 ASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 53/361 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+NT I G + N +E+L + ++M +P +T+ S+L A +D+ G
Sbjct: 115 MPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYG 174
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG I NV I ++L +MYAKC +E + LF L K+ +SWN +I+G +N
Sbjct: 175 KQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKN 234
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ + QM ++ P V+ S+I+ A
Sbjct: 235 GQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----------------------------- 265
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
Y +CG + AR +F + DIV WTA+++G A +G DA+ LF +M + ++
Sbjct: 266 ------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319
Query: 241 PNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
P+S +V+++C+ H G S + + ++ +A+ D+ + G +
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVS------SALIDMYSKCGFI 373
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVIL 351
+A + M PT NV W ++ C + + + A ++ E + P+N+ IL
Sbjct: 374 DDARSVFNLM---PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGIL 430
Query: 352 S 352
S
Sbjct: 431 S 431
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 188/427 (44%), Gaps = 36/427 (8%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKP-DSFTLSSVLPIFADYVDVIKGKEIHGY 66
++ +++ R +A + M + +P DSF + +L ++A + + + +
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ + ++L++ YAK +++ F +P +D++S+N+ IAG N E
Sbjct: 84 MLKRDXFS----WNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ F++M +P + SI+ A A L L GKQ+HG II F N+FI ++L DM
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG I AR +FD + ++VSW +I G A +G I L QM G P+ V
Sbjct: 200 YAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM- 305
++ A G +D+A F+ + + + A+ + G+ ++A + M
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVC-----WTAMMVGYAKNGREEDALLLFNEML 314
Query: 306 --HAGPTENVWLTLLSAC----RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
H P +++S+C +H + GK I NN+ L + Y+
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK---SILAGLNNNLLVSSALIDMYSKCG 371
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
DA S+ M + + SW A H +AL EL E M
Sbjct: 372 FIDDARSVFNLMPTRNV-----VSW-----NAMIVGCAQNGHD-----KDAL-ELFENML 415
Query: 420 QEGYVPD 426
Q+ + PD
Sbjct: 416 QQKFKPD 422
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 309/516 (59%), Gaps = 5/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLVSW +I G +NGL E+A+ M + + PD T++SVL A + KG
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG 416
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +A R GL + V + +SLI+MY+KC ++ + +F +P K+ ISW SII G N
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FF+QM+++ +KP V+ S++ ACA + L GK++H +R G + F+
Sbjct: 477 YRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLP 535
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMY +CG + A F+ + D+ SW ++ G A G A+ LF +M + V
Sbjct: 536 NALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F ++L ACS +G++ YF SM + IAP+ +HYA+V DLLGRAG+L++AYE
Sbjct: 595 PDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYE 654
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +W LL+ACR+++NVEL A+ IF +D ++G Y++L N YA + +
Sbjct: 655 FIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGK 714
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R MR + P CSW+EV + +AF+ GD HP IN L+ E+ME
Sbjct: 715 WDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEA 774
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G + +K+ D + K + HSERLAI FG+I T GT I + KNL +C +CH
Sbjct: 775 TG-LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNT 833
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGD--YW 514
+KFISK+V+R I VRD +FHHF+DG CSCGD YW
Sbjct: 834 VKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 194/359 (54%), Gaps = 15/359 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL SWN ++ G A+ G ++EALN+ +M V ++PD +T VL D+ +G
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+H + IR+G +++V + ++LI MY KC + + +F +P +D ISWN++I+G +N
Sbjct: 215 REVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ EGL+ F M + P ++ +S++ AC L LG+++HG +I+ GF + +
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ M++ G A +F KM+ D+VSWTA+I G +G A+ + ME +GV
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQ 296
P+ + +VL+AC+ GL+DK M ++ Y VA D+ + +
Sbjct: 395 PDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDMYSKCRCID 449
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRV-HKNVELAGKVAEKIFMIDPNNMGAYVILS 352
+A E H P +NV W +++ R+ +++ E + I + PN++ +LS
Sbjct: 450 KALEV---FHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 130/248 (52%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N++I+ L G E+AL + M + + + T ++L + +G +H Y +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
V +G++L++M+ + + ++ +F + +D SWN ++ G + G FDE L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
+ +ML I+P +F ++ C L L G+++H +IR GF+ ++ + ++L+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CG+I AR +FD+M D +SW A+I G + + + LF M + V P+ + +V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 250 LTACSHAG 257
++AC G
Sbjct: 303 ISACEALG 310
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/552 (38%), Positives = 323/552 (58%), Gaps = 42/552 (7%)
Query: 2 PVSDLVSWNTVIVGLARNGL-----YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
P DL +NT+I LA + + + +++R+ L P+ ++ + V
Sbjct: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREE---RLVPNQYSFAFAFKGCGSGVG 117
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMY------------------------------ 86
V++G+++ +AI+ GL+ N+ + ++LI MY
Sbjct: 118 VLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSG 177
Query: 87 -AKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
A+ +++++ +LF +P KD +SW ++I+GC+Q G F E L F ML + P +
Sbjct: 178 YARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTL 237
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S + ACA+L L G+ +H I +N N + + L+DMYAKCG + A +F+
Sbjct: 238 ASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPR 297
Query: 206 --HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ W A+I G A+HG + +AI +FEQM+ + V PN V FVA+L ACSH +++
Sbjct: 298 LKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGR 357
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
YF SM Y + P EHY + DLLGRAG+L+EA E IS+MH P +W LLSAC++
Sbjct: 358 YYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKI 417
Query: 324 HKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACS 383
HK+ E+ +V + + +DPN++G +V+L+N Y+ W +A +LR + G KKTP CS
Sbjct: 418 HKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCS 477
Query: 384 WIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEE-EQKKNL 442
IE+ + F+ GD+SHP ++ L E++ +++ GY+P++ EVL D+++ E ++
Sbjct: 478 SIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETA 537
Query: 443 LYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHH 502
L HSE+LAI FG++ T T IRI+KNLRVC DCH AIKFISK+ REIIVRD R+HH
Sbjct: 538 LLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHH 597
Query: 503 FEDGKCSCGDYW 514
F+DG CSC DYW
Sbjct: 598 FKDGTCSCNDYW 609
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW T+I G + G + EAL+I M + P+ +TL+S L A+ V + +G
Sbjct: 194 MPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQG 253
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCV 118
+ +H Y ++ + N + + LI+MYAKC +E + +LF P + WN++I G
Sbjct: 254 RWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFA 313
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNM 177
+G E ++ F QM I K+ P V+F +++ AC+H + G+ + + +
Sbjct: 314 VHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPEL 373
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
L+D+ + G ++ A I M L D+ W A++ +H +A
Sbjct: 374 EHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDA 421
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 325/536 (60%), Gaps = 30/536 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ +I G +G Y +A+ + +M + ++ PD++ ++S+L + + +G+E+H A+
Sbjct: 115 YTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRAL 174
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV------------------------ 104
+ GL +N + ++ +Y KC + D+ R+F +P
Sbjct: 175 KLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAV 234
Query: 105 ------KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
KD + W ++I G V+N + L+ FR M ++P + ++ AC+ L L
Sbjct: 235 FSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGAL 294
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+G+ +H + + + N+F+ ++L++MY++CG+I A+ +FD+M D++++ +I G
Sbjct: 295 EIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGL 354
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+++G + AI LF M ++P +V FV VL ACSH GL+D + F+SMT+DYG+ P
Sbjct: 355 SMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQ 414
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
EHY + DLLGR G+L+EAY+ I M P + TLLSAC++HKN+EL +VA+ +
Sbjct: 415 IEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLE 474
Query: 339 MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGD 398
+ G YV+LS+ YA++ +WK+AA +R M+ GM+K P CS IEV N+ + F+ GD
Sbjct: 475 DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD 534
Query: 399 KSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIIC 458
HP RI E L+EL + EGY P+ + VL D+E+ +K+ L HSERLAI +G+I
Sbjct: 535 LRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLIS 594
Query: 459 TPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
T T IR++KNLRVC DCH+AIK I+KI +R+++VRD +RFH+FE+G CSCGDYW
Sbjct: 595 TEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W +I G RN AL R M N++P+ FT+ VL + + G+ +H
Sbjct: 242 DTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 301
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + ++ N+ +G++LINMY++C ++++ +F + +D I++N++I+G NG
Sbjct: 302 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 361
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSL 183
+ ++ FR M+ +++P +V+F ++ AC+H + G ++ + R+ G + + +
Sbjct: 362 QAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCM 421
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEK 236
+D+ + G + A + M + + +++G L H + L EQ+ K
Sbjct: 422 VDLLGRVGRLEEAYDLIRTMKM----TPDHIMLGTLLSACKMHKNLELGEQVAK 471
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 31/273 (11%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH IR+G + + L+ +KC ++ + R+F + + ++I G V +G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + ++ + +ML I P + +SI+ AC L G+++H ++ G N +
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187
Query: 183 LLDMYAKCGNIRLARCIFDKMD------------------------------LHDIVSWT 212
++++Y KCG + AR +F++M D V WT
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G + + A+ F M+ + V+PN V VL+ACS G ++ + +S +
Sbjct: 248 AMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRK 306
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ I + A+ ++ R G + EA M
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/510 (40%), Positives = 304/510 (59%), Gaps = 10/510 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N +I G N +A + R+M + DS T+ ++P+ + G+ +HG
Sbjct: 119 VCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGE 178
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G + V + +S I MY KC VE RLF +PVK I+WN++I+G QNGL +
Sbjct: 179 CVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 238
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ F QM + + P + S++ +CAHL +G+++ + NGF N+F++++L+ M
Sbjct: 239 LELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISM 298
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN+ AR +FD M + +VSWTA+I +HG ++LF+ M K G++P+ F
Sbjct: 299 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVF 358
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+ACSH+GL DK F +M ++Y + P EHY+ + DLLGRAG+L EA EFI +M
Sbjct: 359 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMP 418
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL AC++HKNV++A K+ +P N+G YV++SN Y+ ++ +
Sbjct: 419 VEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWR 478
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL-LERMEQEGYVP 425
+RV MR + +K P S++E K K + F+AGD+SH ++ L EL ME G +
Sbjct: 479 IRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMD 538
Query: 426 -DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D E + E HSERLAI FGI+ + GT I +IKNLRVC DCH IK +
Sbjct: 539 CDRGEEVSSTTRE--------HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLV 590
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV R +VRD SRFH+F+DG CSC DYW
Sbjct: 591 SKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
SWN + LA L+ E++++ R M PD+F+ +L A + G+++H +
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSIIAGCVQNGLFD 124
IR G +A + ++LI+MY KC VED+ ++F P + + +N++I+G N
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ FR+M + V+ ++P C L LG+ LHG ++ G + + +S +
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY KCG++ R +FD+M + +++W AVI G + +G A+D + LFEQM+ GV P+
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+VL++C+H G K + + G AP+ A+ + R G L +A
Sbjct: 256 TLVSVLSSCAHLG-AKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKA 308
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV L++WN VI G ++NGL + L + QM + + PD FTL SVL A G
Sbjct: 214 MPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 273
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ +G NV + ++LI+MYA+C + + +F ++PVK +SW ++I +
Sbjct: 274 QEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 333
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + GL F M+ I+P F ++ AC+H G +L + R +
Sbjct: 334 GMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 393
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
S L+D+ + G + A D M + D W A++ +H N
Sbjct: 394 YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKN 438
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/517 (40%), Positives = 299/517 (57%), Gaps = 38/517 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK---PDSFTLSSVLPIFADYVDV 57
MP D+VSWN +I G AR GL++ A+ + +Q V L+ PD+ T++ +LP +
Sbjct: 184 MPHRDVVSWNAMIAGFARVGLFDRAIEVFKQF--VVLQGSMPDAGTMAGILPAMGN---- 237
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
AK + R+F + K+ ISWN+++A
Sbjct: 238 -----------------------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVY 268
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
N + ++ F M +++P ++ ++++P C L+ +GK++H I R N+
Sbjct: 269 ANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNL 328
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+DMYA CG ++ AR IFD M D++SWT++I HG+ +A+ LFE+M
Sbjct: 329 LLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQ 388
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+S+AFVAVL ACSHAGL+ YF+SMT Y I P EHY + DLLGRAG + E
Sbjct: 389 GLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINE 448
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AY+FI+ M P E VW LL ACR+H N+++ A+ +F + P G YV+LSN YA
Sbjct: 449 AYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYAR 508
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A RW D S+R M NKG+KK P S +E+ ++ + F GD+ HP I L ELL +
Sbjct: 509 AGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGK 568
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ GY P+ + LHDVEEE K++ L HSE+LAI F ++ T GT IR+ NLR C DC
Sbjct: 569 IRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDC 628
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H A K IS I REI+++D +R HH G CSCGDYW
Sbjct: 629 HLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 161/351 (45%), Gaps = 40/351 (11%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLK--PDSFTLSSVLPIFADYVDVIKGKEIH 64
V +N +I L + L+ +AL + M PD +T L + D++ G +IH
Sbjct: 87 VCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIH 146
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ LD NV + S I+MY++C R ED++R+F +P +D +SWN++IAG + GLFD
Sbjct: 147 SAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFD 206
Query: 125 EGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ F+Q ++ + P + + I+PA +
Sbjct: 207 RAIEVFKQFVVLQGSMPDAGTMAGILPAMGN----------------------------- 237
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
AK +IR R +FD M +++SW A++ A + A+ LF MEKD V+P+S
Sbjct: 238 ----AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDS 293
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ VL C + + K + P+ A+ D+ G L++A E
Sbjct: 294 ITLATVLPPCGELSAF-SVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFD 352
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
M A + W +++SA H + A + EK+ ++P+++ +L+
Sbjct: 353 LMSARDVIS-WTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLA 402
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 82 LINMYAKCARVEDSHRLF-CLLP----VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA 136
LI YA C+ + +H + P + +N +I + L + L F A
Sbjct: 56 LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLF-----A 110
Query: 137 KIKPR-------HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
++PR H ++ + +C+ L LG Q+H + + D N+++A S + MY++
Sbjct: 111 SMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSR 170
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ-MEKDGVKPNSVAFVA 248
CG A +FD M D+VSW A+I G A G AI +F+Q + G P++
Sbjct: 171 CGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAG 230
Query: 249 VLTACSHA 256
+L A +A
Sbjct: 231 ILPAMGNA 238
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 315/510 (61%), Gaps = 7/510 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G + EEAL + +M ++PD+FT VL + V + +G +IH +
Sbjct: 99 YNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVF 158
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+ +V + + LI+MY KC +E + +F + K SW+SII ++ E L
Sbjct: 159 KAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLM 218
Query: 129 FFRQMLIAKIKPRHVSFSSIM----PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
M + RH + SI+ AC HL + +LG+ +HG ++RN + N+ + +SL+
Sbjct: 219 LLGDM---SGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG++ C+F M + S+T +I G A+HG +A+ +F M ++G+ P+ V
Sbjct: 276 DMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDV 335
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+V VL+ACSHAGL+++ FN M ++ I P+ +HY + DL+GRAG L+EAY+ I +
Sbjct: 336 VYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKS 395
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P + VW +LLSAC+VH N+E+ AE IF ++ +N G Y++L+N YA A++W +
Sbjct: 396 MPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANV 455
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M K + +TP S +E Y FV+ DKS P I + ++++ +++ EGY
Sbjct: 456 ARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYT 515
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD +VL DV+E++K+ L +HS++LAI F +I T +G+ IRI +NLR+C DCHT KFI
Sbjct: 516 PDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFI 575
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S I +REI VRD +RFHHF+DG CSC DYW
Sbjct: 576 SVIYEREITVRDRNRFHHFKDGTCSCKDYW 605
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 107/203 (52%), Gaps = 9/203 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K++H + ++ GL + GS+L+ A CA +E + +F + + +N++I
Sbjct: 48 KQVHAHILKLGLFYDSFCGSNLV---ASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIR 104
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V + +E L + +ML I+P + ++ ++ AC+ L L G Q+H + + G +
Sbjct: 105 GNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEV 164
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F+ + L+ MY KCG I A +F++MD + SW+++I +A H+ + L M
Sbjct: 165 DVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMS 224
Query: 236 KDGV-KPNSVAFVAVLTACSHAG 257
+G + V+ L+AC+H G
Sbjct: 225 GEGRHRAEESILVSALSACTHLG 247
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/538 (40%), Positives = 307/538 (57%), Gaps = 32/538 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I L+ + EAL + M LKPD T V+ + G +H + +
Sbjct: 134 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 193
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN-------- 120
+ G + + I SSLI++YA + + +LF L +D +SWN++I G V++
Sbjct: 194 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARM 253
Query: 121 -----------------------GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
G +E L F QM +KP + S++ ACAHL
Sbjct: 254 VFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 313
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G LH I N + N + ++L+DMYAKCG I LA +F+ M+ D+++W +I G
Sbjct: 314 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 373
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+HGN +A LF++M++ GV+PN + FVA+L+ACSHAG++D+ + M+ YGI P
Sbjct: 374 MAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEP 433
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY V DLL RAG L+EA E I M P + LL CR+H N EL V +++
Sbjct: 434 KVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRL 493
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
+ P + G Y++LSN YAAA++W DA +R M+ G+ K P S IE+K + FVAG
Sbjct: 494 INLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAG 553
Query: 398 DKSHPFYHRINEALKELLERMEQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGI 456
D SHP ++I E L E+ R++ GY DT VL D+EEE K++ L HSE+LAI +G+
Sbjct: 554 DWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGL 613
Query: 457 ICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ IRI+KNLRVC DCH IK ISK+ REIIVRD +RFHHFEDG+CSC D+W
Sbjct: 614 LHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWNT+I G A G EAL + QM V +KP T+ S+L A + KG
Sbjct: 258 MVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 317
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H Y + ++ N +G++L++MYAKC ++ + ++F + KD ++WN+IIAG +
Sbjct: 318 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 377
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F++M A ++P ++F +I+ AC+H + G++L C+ + G + +
Sbjct: 378 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEH 437
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA-LHGN 223
++D+ A+ G + A + M + S ++G +HGN
Sbjct: 438 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGN 482
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 318/545 (58%), Gaps = 31/545 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D +NT+ G R L + + +M + ++ P+ FT ++ + +G
Sbjct: 80 IPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEG 139
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + ++ G A+ ++LI+MY +E + R+F +P +D +SW S+I G Q
Sbjct: 140 KQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQW 199
Query: 121 GLFDEGLKFFRQM--------------------------LIAKIKPRHVSF-----SSIM 149
G D+ + F M L +++ +V +S++
Sbjct: 200 GFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASML 259
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC L L GK +HG I ++G + + +A++++DMY KCG + A +F+++ I
Sbjct: 260 SACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGIS 319
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW +I G A+HG AI LF++ME++ V P+ + FV VL+AC+H+GL+++ YF M
Sbjct: 320 SWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYM 379
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
T+ G+ P EH+ + DLLGRAG L+EA + I+ M P V L+ ACR+H N EL
Sbjct: 380 TEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTEL 439
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
++ +K+ ++P+N G YV+L+N YA+A RW+D A +R M ++G+KK P S IE ++
Sbjct: 440 GEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESES 499
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
F+AG ++HP I L E+LE + GYVPDT VLHD++EE+K+N LYYHSE+
Sbjct: 500 GVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEK 559
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LAI FG++ T G T+RI KNLR+C DCH A K ISK+ REII+RD +RFHHF G CS
Sbjct: 560 LAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCS 619
Query: 510 CGDYW 514
C DYW
Sbjct: 620 CKDYW 624
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 148/329 (44%), Gaps = 41/329 (12%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K+ H IR GL A+ +I A K + + +F +P DA +N+I G +
Sbjct: 37 KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ L + + +ML + P ++ ++ AC + GKQ+H +++ GF + F
Sbjct: 97 RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG--------------------N 218
++L+ MY ++ AR +FD M D+VSWT++I G N
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216
Query: 219 ALHGNA-----------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++ NA H+A +LF++M + V + ++L+AC+ G +++ + +
Sbjct: 217 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQG-KWIH 275
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHK 325
+ GI + V D+ + G L++A E + + P + + W ++ +H
Sbjct: 276 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNEL---PQKGISSWNCMIGGLAMHG 332
Query: 326 NVELAGKVAEKI--FMIDPNNMGAYVILS 352
E A ++ +++ M+ P+ + +LS
Sbjct: 333 KGEAAIELFKEMEREMVAPDGITFVNVLS 361
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/501 (40%), Positives = 310/501 (61%), Gaps = 1/501 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G A++ +L+ QM L PDSFT+ S+L + + GKE+HG+
Sbjct: 818 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 877
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR+ L+ ++ + S++++Y C + LF + K +SWN++I G +QNG D L
Sbjct: 878 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 937
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FRQM++ I+ +S + AC+ L +L LG++ H +++ +D+ FIA SL+DMY
Sbjct: 938 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 997
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AK G+I + +F+ + SW A+IMG +HG A +AI LFE+M++ G P+ + F+
Sbjct: 998 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 1057
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS-NMH 306
VLTAC+H+GLI + Y + M +G+ P+ +HYA V D+LGRAG+L +A ++ M
Sbjct: 1058 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 1117
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
+W +LLS+CR+H+N+E+ KVA K+F ++P YV+LSN YA +W+D
Sbjct: 1118 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 1177
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M ++K CSWIE+ K ++FV G++ + I L ++ + GY PD
Sbjct: 1178 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPD 1237
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HD+ EE+K L HSE+LA+ +G+I T +GTTIR+ KNLR+C DCH A K ISK
Sbjct: 1238 TMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISK 1297
Query: 487 IVQREIIVRDNSRFHHFEDGK 507
+++REI+VRDN RFHHF++G+
Sbjct: 1298 VMEREIVVRDNKRFHHFKNGE 1318
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN VI +RN LY+E L + + +L PD FT V+ A DV G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG ++ GL +V +G++L++ Y V D+ +LF ++P ++ +SWNS+I NG
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 124 DEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E +M+ P + +++P CA + LGK +HG ++ D + +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG- 238
++L+DMY+KCG I A+ IF + ++VSW ++ G + G+ H + QM G
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 239 -VKPNSVAFVAVLTACSHAGLI 259
VK + V + + C H +
Sbjct: 745 DVKADEVTILNAVPVCFHESFL 766
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 142/260 (54%), Gaps = 6/260 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP +LVSWN++I + NG EE+ ++ +M G+ PD TL +VLP+ A +
Sbjct: 603 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 662
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ GK +HG+A++ LD + + ++L++MY+KC + ++ +F + K+ +SWN+++ G
Sbjct: 663 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 722
Query: 117 CVQNGLFDEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G RQML +K V+ + +P C H + L K+LH ++ F
Sbjct: 723 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 782
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
N +A++ + YAKCG++ A+ +F + + SW A+I G+A + ++ QM
Sbjct: 783 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 842
Query: 235 EKDGVKPNSVAFVAVLTACS 254
+ G+ P+S ++L+ACS
Sbjct: 843 KISGLLPDSFTVCSLLSACS 862
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M LVSWNTVI G +NG + AL + RQM ++ ++ V + + G
Sbjct: 912 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 971
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E H YA++H L+ + I SLI+MYAK + S ++F L K SWN++I G +
Sbjct: 972 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 1031
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
GL E +K F +M P ++F ++ AC H +H G + L G N+
Sbjct: 1032 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 1091
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKM-DLHDIVSWTAVIMGNALHGN 223
+ ++DM + G + A R + ++M + D+ W +++ +H N
Sbjct: 1092 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 1137
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 56 DVIKGKEIHGY---AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D+ G++IH + R D +C + +I MYA C +DS +F L K+ WN+
Sbjct: 454 DIEMGRKIHQLVSGSTRLRNDDVLC--TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 511
Query: 113 IIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I+ +N L+DE L+ F +M+ + P H ++ ++ ACA ++ + +G +HG +++
Sbjct: 512 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 571
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +++F+ ++L+ Y G + A +FD M ++VSW ++I + +G + ++ L
Sbjct: 572 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 631
Query: 232 -EQMEKDG---VKPNSVAFVAVLTACSH 255
E ME++G P+ V VL C+
Sbjct: 632 GEMMEENGDGAFMPDVATLVTVLPVCAR 659
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/517 (39%), Positives = 311/517 (60%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP DLVSWN++I G + G + ++ +M V +P+ T S++
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IHG ++ G+ V + ++ IN Y K + S +LF L +K+ +SWN++I +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNGL ++GL +F +P +F +++ +C + + L + +HG I+ GF N
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I ++LLD+Y+K G + + +F ++ D ++WTA++ A HG DAI FE M G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V F +L ACSH+GL+++ YF +M+K Y I P +HY+ + DLLGR+G LQ+A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y I M P+ VW LL ACRV+K+ +L K AE++F ++P + YV+LSN Y+A+
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
WKDA+ +R M+ KG+ + CS+IE NK + FV GD SHP +I + LKE+ ++M
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 419 EQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ E GY T+ VLHDV E+ K+ ++ HSE++A+ FG++ I I KNLR+CGDC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H K IS I +R II+RD+ RFHHF DG CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 133/266 (50%), Gaps = 9/266 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + + RHG IG L+ Y + + +LF +P +D +SWNS+I+G
Sbjct: 56 KVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 121 GLFDEGLKFFRQMLIAKI--KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + + +M+I+++ +P V+F S++ AC + + G+ +HG +++ G + +
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++ ++ Y K G++ + +F+ + + ++VSW +I+ + +G A ++ F + G
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ F+AVL +C G++ A + + G + + A+ DL + G+L+++
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQG-IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 299 YEFISNMHAGPTENVWLTLLSACRVH 324
+ P W +L+A H
Sbjct: 290 STVFHEI-TSPDSMAWTAMLAAYATH 314
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++ A ++ L + LH ++++ + FI L+ Y + G+ A +FD+M
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+VSW ++I G + G + +M + G +PN V F+++++AC + G ++
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG- 153
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + +G+ + A + G+ G L + + ++
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 305/510 (59%), Gaps = 10/510 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N +I G N +A + R+M + DS T+ ++P+ + G+ +HG
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ GLD+ V + +S I MY KC VE RLF +PVK I+WN++I+G QNGL +
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ + QM + + P + S++ +CAHL +G ++ + NGF N+F++++ + M
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN+ AR +FD M + +VSWTA+I +HG + LF+ M K G++P+ F
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+ACSH+GL DK F +M ++Y + P EHY+ + DLLGRAG+L EA EFI +M
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL AC++HKNV++A K+ +PNN+G YV++SN Y+ ++ +
Sbjct: 422 VEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR 481
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL-LERMEQEGYVP 425
+RV MR + +K P S++E K + + F+AGD+SH ++ L EL ME G +
Sbjct: 482 IRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMD 541
Query: 426 -DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D E + E HSERLAI FGI+ + GT I +IKNLRVC DCH +K +
Sbjct: 542 CDRGEEVSSTTRE--------HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQV 593
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV R+ +VRD SRFH+F+DG CSC DYW
Sbjct: 594 SKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 3/292 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN + LA L+ E++++ R M PD+F+ +L A + G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS--WNSIIAGCVQNGLFDEG 126
+ G + + ++LI+MY KC V D+ ++F P +S +N++I+G N +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
FR+M + V+ ++P C L LG+ LHG ++ G D + + +S + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG++ R +FD+M + +++W AVI G + +G A+D + L+EQM+ GV P+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+VL++C+H G K + + G P+ A + R G L +A
Sbjct: 261 VSVLSSCAHLG-AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV L++WN VI G ++NGL + L + QM + + PD FTL SVL A G
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ +G NV + ++ I+MYA+C + + +F ++PVK +SW ++I +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + GL F M+ I+P F ++ AC+H G +L + R +
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S L+D+ + G + A + M + D W A++ +H N A F ++ +
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 454
Query: 239 VKPNSVAFVAVLT 251
+PN++ + +++
Sbjct: 455 FEPNNIGYYVLMS 467
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/511 (39%), Positives = 318/511 (62%), Gaps = 4/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V +IVG ++ G EA+ + M ++P+ +T +SVL + D+ GK IH
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G ++ + +SL+ MY +C+ V+DS R+F + + +SW S+I+G VQNG +
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M+ IKP + SS + C++L G+Q+HG + + GFD + + S L+
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLI 410
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y KCG +AR +FD + D++S +I A +G +A+ LFE+M G++PN V
Sbjct: 411 DLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++VL AC+++ L+++ F+S KD I + +HYA + DLLGRAG+L+EA E ++
Sbjct: 471 TVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTT 528
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
P +W TLLSAC+VH+ VE+A ++ KI I+P + G +++SN YA+ +W
Sbjct: 529 EVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK-SHPFYHRINEALKELLERMEQEGY 423
++ M++ +KK PA SW+E+ + + F+AGD SHP +I E L+EL+++ + GY
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGY 648
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V D V D+EE K+ L+ HSE+LAI F + G +IRI+KNLRVC DCH+ IK
Sbjct: 649 VEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKI 707
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S++++REII RD+ RFHHF DG CSCGDYW
Sbjct: 708 VSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 161/294 (54%), Gaps = 2/294 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +V+WN++I L ++ +EA+ + R M N+ PD +TLSSV F+D +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 61 KEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ HG A+ GL+ +NV +GS+L++MY K + ++ + + KD + ++I G Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E +K F+ ML+ K++P +++S++ +C +L + GK +HG ++++GF+ +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY +C + + +F ++ + VSWT++I G +G A+ F +M +D +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
KPNS + L CS+ + ++ +TK YG + + DL G+ G
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCG 417
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 147/311 (47%), Gaps = 12/311 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I + ++ G A + GS L++ KC ++ + ++F + + ++WNS+IA +++
Sbjct: 85 KTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFI 179
E ++ +R M+ + P + SS+ A + L+ ++ HG + G + N+F+
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+DMY K G R A+ + D+++ D+V TA+I+G + G +A+ F+ M + V
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + +VL +C + I M K G + ++ + R + ++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSL 322
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ P + W +L+S L E++ +I+ M I N++ +
Sbjct: 323 RVFKCIEY-PNQVSWTSLISG--------LVQNGREEMALIEFRKMMRDSIKPNSFTLSS 373
Query: 360 RWKDAASLRVF 370
+ ++L +F
Sbjct: 374 ALRGCSNLAMF 384
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 310/514 (60%), Gaps = 21/514 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G ++N ++A + M + +
Sbjct: 96 MPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIH--------------------QV 135
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H +A++ + ++ +GSSL++MYAK ++++ R+F +LP +D +S+ +I++G Q
Sbjct: 136 KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQL 195
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L FR + ++ V+F++++ A + L+++ GKQ+HG I+R M +
Sbjct: 196 GLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 255
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMY+KCG + +R +FD M +VSW A++MG HG AH+ + LF M D VK
Sbjct: 256 NSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-CDEVK 314
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV +AVL+ SH GL+D+ F+ + K+ + EHY V DLLGR+G+LQ+A
Sbjct: 315 PDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALN 374
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M PT +W +LL ACRVH NV + VA+K+ I+P N G YVILSN YAAA
Sbjct: 375 LIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGM 434
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R M K + K P SW+ + + F + ++ HP IN +KE+ ++
Sbjct: 435 WKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKA 494
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VPD VLHDV++EQK+ +L HSE+LAI FG++ TP TI+++KNLR+C DCH
Sbjct: 495 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 554
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ REI +RD +RFH +G C+CGDYW
Sbjct: 555 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 30/220 (13%)
Query: 51 FADYVDVI----------KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC 100
F DY D I +G+++H + G + + + L+ MYA+C +ED+ +
Sbjct: 35 FHDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLD 94
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
+P ++ +SW ++I+G QN D+ + F ML A I H
Sbjct: 95 GMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI--------------------HQ 134
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
KQ+H ++ F+ +MF+ SSLLDMYAK NI+ AR +FD + D+VS+TA++ G
Sbjct: 135 VKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQ 194
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
G +A+ LF + +G++ N V F A+L A S +D
Sbjct: 195 LGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMD 234
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
R + + C L G+Q+H ++ G+ +++A+ L+ MYA+CG + AR +
Sbjct: 34 RFHDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVL 93
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
D M ++VSWTA+I G + + A LF M + G+
Sbjct: 94 DGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI 132
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/519 (40%), Positives = 316/519 (60%), Gaps = 9/519 (1%)
Query: 1 MPVSDLVSWNTVIVGLARN---GLYEEALNIVRQMGNVNLKPDSFTLSSVLP--IFADYV 55
MP D+V+WN +I G A + +A N++R+ G L + T+ ++L + DY+
Sbjct: 611 MPERDVVTWNALIGGHADDKDPNATIQAFNLMRREG---LLSNYITIVNLLGTCMSPDYL 667
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+ G IH + + G + + + SSLI MYA+C + S +F +L K++ +WN+I +
Sbjct: 668 -LKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFS 726
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G +E LKF +M + SFS + +LT L G+QLH II+ GF+
Sbjct: 727 ANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFEL 786
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++ ++ +DMY KCG I I + SW +I A HG A F +M
Sbjct: 787 DEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEML 846
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+KP+ V FV++L+ACSH GL+D+ YF+SMT ++G+ + EH + DLLGR+G+L
Sbjct: 847 DLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRL 906
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EA FI M P E VW +LL+AC+VH N+EL K A+++F ++ ++ AYV+ SN
Sbjct: 907 AEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVC 966
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A+ +RW D ++R M ++ +KK PACSWI++KNK F GD+ HP +I L+EL
Sbjct: 967 ASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELR 1026
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+ +EG++PDT L D +EEQK++ L+ HSER+A+ FG+I + +G+ +RI KNLRVCG
Sbjct: 1027 KMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCG 1086
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH+ K +SKIV R+I+VRD+ RFHHF GKCSC DYW
Sbjct: 1087 DCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 1/250 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW +++V A NG +E LNI R + + L T+++V+ + D G +I
Sbjct: 314 NIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQIL 373
Query: 65 GYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
G I+ GLD ++V + +SLI+M+ VE++ R+F + +D ISWNSII NG F
Sbjct: 374 GDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L F M K +++ S+++PAC L G+ LHG I ++G + N+ + +SL
Sbjct: 434 EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSL 493
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L MYA+ G+ A +F M D++SW +++ + G AI L +M K N
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNY 553
Query: 244 VAFVAVLTAC 253
V F L+AC
Sbjct: 554 VTFTTALSAC 563
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 138/253 (54%), Gaps = 3/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SWN++I A NG +EE+L M + K D T+S++LP + G
Sbjct: 412 MQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWG 471
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG + GL++NVC+ +SL++MYA+ ED+ +F +P +D ISWNS++A V++
Sbjct: 472 RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVED 531
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + + +ML + +V+F++ + AC +L L K +H +I N+ I
Sbjct: 532 GKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIG 588
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY K G + A+ + M D+V+W A+I G+A + + I F M ++G+
Sbjct: 589 NTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLL 648
Query: 241 PNSVAFVAVLTAC 253
N + V +L C
Sbjct: 649 SNYITIVNLLGTC 661
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 129/251 (51%), Gaps = 2/251 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG-KEIHGY 66
SWN +I G R G Y +A+ M + P S+ ++S++ + +G ++IHGY
Sbjct: 215 SWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGY 274
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ GL +NV +G+SL++ Y V ++++LF + + +SW S++ NG E
Sbjct: 275 VVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEV 334
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIASSLLD 185
L +R + + + ++++ C +G Q+ G +I++G D ++ +A+SL+
Sbjct: 335 LNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLIS 394
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
M+ ++ A +F+ M D +SW ++I +A +G +++ F M + K + +
Sbjct: 395 MFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYIT 454
Query: 246 FVAVLTACSHA 256
A+L AC A
Sbjct: 455 ISALLPACGSA 465
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H ++ + N ++L+NMY+K ++ + +F + ++ SWN++I+G V+
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMF 178
G + + ++FF M + P +S++ AC + G +Q+HG +++ G N+F
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SLL Y G++ A +F++++ +IVSWT++++ A +G+ + ++++ + +G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ V+ C G + + K S ++ + G ++EA
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
+NM T + W ++++A
Sbjct: 406 SRVFNNMQERDTIS-WNSIITA 426
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
++GK LH +++ N F ++L++MY+K G+I+ A+ +FDKM + SW +I G
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
G H A+ F M ++GV P+S +++TAC +G + + + G+ +
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSN 283
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLL 318
++ G G + EA + + P W +L+
Sbjct: 284 VFVGTSLLHFYGTHGSVSEANKLFEEIEE-PNIVSWTSLM 322
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/508 (39%), Positives = 310/508 (61%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+ G RN L E+L + ++M ++ ++PD FT V+ + D G +H + +
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
++G + + L+ MY K + + LF + VKD ++WN+ +A CVQ G L+
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
+F +M ++ + S++ AC L +L +G++++ + D N+ + ++ LDM+
Sbjct: 197 YFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHL 256
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN AR +F++M ++VSW+ +I+G A++G++ +A++LF M+ +G++PN V F+
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 249 VLTACSHAGLIDKAWSYFNSMTK--DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
VL+ACSHAGL+++ YF+ M + D + P EHYA + DLLGR+G L+EAYEFI M
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W LL AC VH+++ L KVA+ + P+ +V+LSN YAAA +W
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R MR G KK A S +E + K + F GDKSHP I E L E+L+++ + GYVPD
Sbjct: 437 VRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD 496
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HDVE E+K+ L +HSE+LAI FG+I G IR++KNLR C DCH KF+S
Sbjct: 497 TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSS 556
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ EII+RD +RFHHF +G CSC ++W
Sbjct: 557 LTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DLV+WN + + G AL +M ++ DSFT+ S+L + G
Sbjct: 170 MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIG 229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EI+ A + +D N+ + ++ ++M+ KC E + LF + ++ +SW+++I G N
Sbjct: 230 EEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMN 289
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M ++P +V+F ++ AC+H ++ GK+ ++++ D N+
Sbjct: 290 GDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN-DKNLEPR 348
Query: 181 ----SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
+ ++D+ + G + A KM + D W A++ A+H
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K++H ++R GF + + + LL+ G++ AR +FD+M I W + G +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+++ L+++M GV+P+ + V+ A S G
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/514 (38%), Positives = 312/514 (60%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW +VI GL NG EAL + +M + K S TL+ L A+ G
Sbjct: 200 MPNRNVISWTSVIGGLDHNGRSFEALVVFHKM-LASFKATSSTLACALTACANICTPFIG 258
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IHG ++ G N I +SLI+ YA C ++++ +F ++ + W +++ G N
Sbjct: 259 VQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLN 318
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L+ F+ M+ + P S +S + +C L + G+++H + G + ++F++
Sbjct: 319 CRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVS 378
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KCG+I +F +M ++VSW ++I+G A HG A++LF QM + V
Sbjct: 379 NSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVD 438
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + +L+AC H+G++ K +F K++GI + EHY+++ DLLGR G+L+EA
Sbjct: 439 PDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEA 498
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M VWL LLS+ H NV +A + A+ + + PN AY +LSN YA+ +
Sbjct: 499 LIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGK 558
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + + +R M+++G+ K P SWI +K + F++GD+SHP +I + L+ L ++++
Sbjct: 559 WTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKE 618
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD K HDVE EQK+ +L YHSERLAI FG+I T +G+TI ++KNLR+CGDCH A
Sbjct: 619 LGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNA 678
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SK+V REI+VRD SRFHHF +G CSCGDYW
Sbjct: 679 VKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 25/387 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV DL+SWN+++ G + G A N+ +M N+ + ++++ ++ V
Sbjct: 107 MPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNV----VSWTTIINGLLEFGRV--- 159
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ R +V +S+++ + RVED+ LF +P ++ ISW S+I G N
Sbjct: 160 -EVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHN 218
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F +ML A K + + + ACA++ T +G Q+HG I++ G+ N +I+
Sbjct: 219 GRSFEALVVFHKML-ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYIS 277
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ YA C I A IF+ ++V WTA++ G L+ DA+ +F+ M + V
Sbjct: 278 ASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVL 337
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + + L +C +D+ +++ G+ ++ + + G + +
Sbjct: 338 PNQSSLTSALNSCCGLEAVDRG-REVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIA 396
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM------IDPNNMGAYVILS 352
+ M +NV W +++ C H G+ A +F +DP+ + +LS
Sbjct: 397 VFTRM---SRKNVVSWNSIIVGCAQHG----FGRWALTLFAQMIRTRVDPDEITLAGLLS 449
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKT 379
+ K + F +N G++ T
Sbjct: 450 ACGHSGMLTKGRCFFKHFGKNFGIEMT 476
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+I YA R+ED+ +LF +PVKD ISWNS++ GC++ G F +M +
Sbjct: 87 MIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNV--- 143
Query: 142 HVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
VS+++I+ L G+ ++ C+ R ++ +S++ + G + A +F
Sbjct: 144 -VSWTTIING-----LLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELF 197
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+KM +++SWT+VI G +G + +A+ +F +M K S LTAC++
Sbjct: 198 EKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTACAN 251
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVKP 241
LL + + G I AR +F+KM + +T +I G A G DA+ LF +M KD +
Sbjct: 56 LLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISW 115
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS +L C G + A + F+ M++ ++ + + + L G+++ A
Sbjct: 116 NS-----MLKGCLKCGDLTMACNMFDKMSERNVVS-----WTTIINGLLEFGRVEVAECL 165
Query: 302 ISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
M PT++V W +++ + VE A ++ EK+
Sbjct: 166 FRVM---PTKDVTAWNSMVHGFFSNGRVEDAIELFEKM 200
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/511 (39%), Positives = 319/511 (62%), Gaps = 5/511 (0%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V W ++I G +N EAL + ++M PD T+++++ A+ D+ G ++H +
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH 205
Query: 67 AIRHGLDANVC--IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR +D +C +GS+L+NMYAKC ++ + ++F L KD +W+++I G V+N
Sbjct: 206 -IRE-MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRST 263
Query: 125 EGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L+ FR++ + ++P V+ +++ ACA L L G+ +H I R ++ + +SL
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DM++KCG+I A+ IFD M D++SW +++ G ALHG +A++ F M+ ++P+
Sbjct: 324 IDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDE 383
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ F+ VLTACSHAGL+ + F + YG+ EHY + DLL RAG L EA EFI
Sbjct: 384 ITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIR 443
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P +W ++L ACRV+ N+EL + A + ++P N G Y++LSN YA + W +
Sbjct: 444 VMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNE 503
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R M KG++KTP CS + + N A++F+AGD SHP I+ L+++ E+++ GY
Sbjct: 504 VKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGY 563
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V DT EVL ++++ +K+ + HSE+LA+ +G++ + G I I+KNLRVC DCHT IK
Sbjct: 564 VADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKL 623
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKI QR+I +RD +RFHHF+DG CSC DYW
Sbjct: 624 VSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 165/308 (53%), Gaps = 9/308 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIKGK 61
V D+++WN+++ + + AL +M + PD FT S+L A ++ GK
Sbjct: 40 VLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGK 99
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+HG +++ L +++ I ++L+NMYA C ++ + LF + ++ + W S+I+G ++N
Sbjct: 100 VLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNH 159
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L +++M P V+ ++++ ACA L L +G +LH I + S
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGS 219
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVK 240
+L++MYAKCG+++ AR +FD++ D+ +W+A+I G + + +A+ LF ++ ++
Sbjct: 220 ALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279
Query: 241 PNSVAFVAVLTACSHAGLIDKA-W--SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
PN V +AV++AC+ G ++ W Y K + ++ + ++ D+ + G +
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN----NSLIDMFSKCGDIDA 335
Query: 298 AYEFISNM 305
A +M
Sbjct: 336 AKRIFDSM 343
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACA 153
++ +F V D ++WNS++ V + + L+ + +ML ++ P +F S++ CA
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L +GK LHG +++ +++I ++LL+MYA CG+++ AR +F++M + V WT+
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+I G + ++A+ L+++ME+DG P+ V +++AC+
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 39/225 (17%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL+SWN+++ GLA +GL EAL M +L+PD T VL + V +G
Sbjct: 343 MSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++ Y I +Y R++ H + ++ +
Sbjct: 403 KKLF-YEIE--------------ALYG--VRLKSEH-------------YGCMVDLLCRA 432
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
GL E +F R M ++P + S++ AC L LG++ C++ +D ++I
Sbjct: 433 GLLAEAREFIRVM---PLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYI 489
Query: 180 ASSLLDMYAK---CGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
S ++YA+ ++ R + ++ + ++V++ N H
Sbjct: 490 LLS--NIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAH 532
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/511 (38%), Positives = 300/511 (58%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+ ++SW +I E + + +M + P+ T+ S++ + GK +
Sbjct: 291 ASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLL 350
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + +R+G ++ + ++ I+MY KC V + +F KD + W+++I+ QN
Sbjct: 351 HAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCI 410
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
DE F M I+P + S++ CA +L +GK +H I + G +M + +S
Sbjct: 411 DEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSF 470
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DMYA CG+I A +F + DI W A+I G A+HG+ A+ LFE+ME GV PN
Sbjct: 471 VDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPND 530
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ F+ L ACSH+GL+ + F+ M ++G P EHY + DLLGRAG L EA+E I
Sbjct: 531 ITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIK 590
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M P V+ + L+AC++HKN++L A++ ++P+ G V++SN YA+A RW D
Sbjct: 591 SMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGD 650
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
A +R M+++G+ K P S IEV + F+ GD+ HP ++ E + E+ E++E GY
Sbjct: 651 VAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGY 710
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
PD VLH++++E+K + L YHSE+LA+ +G+I T G IRI+KNLRVC DCH A K
Sbjct: 711 TPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKL 770
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKI REIIVRD +RFHHF++G CSC DYW
Sbjct: 771 LSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 182/345 (52%), Gaps = 6/345 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+T+I R+GL +EAL+++R M + +KP + S+ + A+ D+ GK +H
Sbjct: 189 DVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMH 248
Query: 65 GYAIRHGL--DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
Y +R+G + V + ++LI+MY KC + + R+F L ISW ++IA +
Sbjct: 249 AYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNN 308
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+EG++ F +ML + P ++ S++ C L LGK LH +RNGF ++ +A++
Sbjct: 309 LNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATA 368
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+DMY KCG++R AR +FD D++ W+A+I A + +A +F M G++PN
Sbjct: 369 FIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPN 428
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V++L C+ AG ++ + +S GI + D+ G + A+
Sbjct: 429 ERTMVSLLMICAKAGSLEMG-KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF 487
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI--FMIDPNNM 345
+ ++W ++S +H + E A ++ E++ + PN++
Sbjct: 488 AEA-TDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDI 531
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 157/307 (51%), Gaps = 10/307 (3%)
Query: 1 MPVSDLVSWNT-------VIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD 53
+P++ L S+++ +I +N +A I M + + D+F + SVL
Sbjct: 77 VPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCL 136
Query: 54 YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSI 113
+ G+E+HG+ +++G +V + ++LI MY++ + + LF + KD +SW+++
Sbjct: 137 IPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTM 196
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG- 172
I ++GL DE L R M + ++KP + SI A L L LGK +H ++RNG
Sbjct: 197 IRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGK 256
Query: 173 -FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ + ++L+DMY KC N+ AR +FD + I+SWTA+I N ++ + LF
Sbjct: 257 CGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLF 316
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
+M +G+ PN + ++++ C AG ++ ++ T G S A D+ G+
Sbjct: 317 VKMLGEGMFPNEITMLSLVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGK 375
Query: 292 AGKLQEA 298
G ++ A
Sbjct: 376 CGDVRSA 382
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/518 (39%), Positives = 318/518 (61%), Gaps = 6/518 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVI 58
+P WN VI G A + A+ R M N + D+ T S L A +
Sbjct: 61 IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ ++H +R G +A+V + ++L++ YAK ++ + +LF +P D SWN++IAG
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180
Query: 119 QNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
Q + + F++M + ++P V+ + AC+ L L G+ +H I+ + N+
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNV 240
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + ++DMYAKCG++ A +F+ M +++W +IM A+HG+ H A+ LFE++ +
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ P++V+++AVL AC+HAGL++ FNSMT+ G+ P+ +HY ++ DLLGRAG+L+
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLK 359
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EAY+ +S++ P +W TLL ACR + +VE+A + K+ + + G +V+LSN YA
Sbjct: 360 EAYDIVSSL-PFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYA 418
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A +RW D +R MR + +KKTP S+IE+K K Y FV GD+SH I L E+
Sbjct: 419 ARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINL 478
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R++ GY DT VLHD+ +E K+N L YHSE+LA+ FG+ CT +GT I++IKNLR+CGD
Sbjct: 479 RIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGD 538
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH IK ISKI REIIVRD +RFH F++G CSC DYW
Sbjct: 539 CHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 320/537 (59%), Gaps = 31/537 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I G + + EEAL + M ++ +++T +L + + + ++IH + I
Sbjct: 86 WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHII 145
Query: 69 RHGLDANVCIGSSLINMYAK-------------------------------CARVEDSHR 97
+ G + + +SL+N+Y+K C +E ++
Sbjct: 146 KMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYE 205
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +P ++ ISW S+I+GCV G E L F +M A IK +V+ S + ACA L
Sbjct: 206 IFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGV 265
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L GK +H I ++ + + + L+DMYAKCG++ A +F KM+ + WTA+I G
Sbjct: 266 LDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+HG +A+ F +M+ GV+PN + F +LTACSHAGL+ +A F SM + +G P
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKP 385
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
S EHY + DLLGRAG L+EA E I NM P +W LL+AC +H N+EL ++ + +
Sbjct: 386 SIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKIL 445
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
+DP + G Y+ L++ +AAA W AA +R M+ +G+ K P CS I V A+ F+AG
Sbjct: 446 IQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAG 505
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII 457
D+SHP I+ L++++ER+ +EGY P ++L D+E+++K+ +++HSE+LA+ FG+I
Sbjct: 506 DESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565
Query: 458 CTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
T G TIRI+KNLRVC DCHT IK ISK+ REI++RD +RFH F+DG C+CGDYW
Sbjct: 566 STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW ++I G G +EALN+ +M +K D+ L S L AD + +G
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y +H ++ + +G LI+MYAKC +E++ +F + K W ++I+G +
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIH 329
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G E L++F +M A ++P ++F+ I+ AC+H +H K L + R +GF ++
Sbjct: 330 GRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEH 389
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G ++ A + + M + + W A++ +HGN
Sbjct: 390 YGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 434
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAK--CARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++IHG ++ GL + S L+ A + + +F + + WN++I G
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ +E L + ML + +F ++ AC+ ++ L +Q+H II+ GF ++
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIY 154
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHD------------------------------- 207
+SLL++Y+K G+I+ AR +FD++D D
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
I+SWT++I G G +A++LF +M+ G+K ++VA V+ L AC+ G++D+ + +
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG-KWIH 273
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
+ K + I + D+ + G L+EA E M +VW ++S +H
Sbjct: 274 AYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV-SVWTAMISGYAIHGR- 331
Query: 328 ELAGKVAEKIFM------IDPNNMGAYVILS 352
G+ A + FM ++PN M IL+
Sbjct: 332 ---GREALEWFMKMQTAGVEPNQMTFTGILT 359
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/548 (37%), Positives = 322/548 (58%), Gaps = 34/548 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VSW +++ + + L+++ M + L+PD F + ++ + +
Sbjct: 64 MPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRL 123
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H + + + SSLI+MY KC + +D+ +F + K+++SW S+I+G +
Sbjct: 124 GKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYAR 183
Query: 120 NGLFDEGLKFFRQ-----------MLIAKIKPRH---------------------VSFSS 147
+G E + F Q ++ I+ H + SS
Sbjct: 184 SGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSS 243
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ CA+L L LGKQ+HG +I GF+ +FI+++L+DMYAKC +I A+ IF +M D
Sbjct: 244 VVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKD 303
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++SWT++I+G A HG A +A++L+++M +KPN V FV +L ACSHAGL+ + F
Sbjct: 304 VISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFR 363
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SMT DY I PS +HY + DLL R+G L EA + + P E W +LLSAC H N+
Sbjct: 364 SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNL 423
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
E+ ++A+++ + P + Y++LSN YA A W + +R M + ++K P S I+
Sbjct: 424 EMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDF 483
Query: 388 KNKAYAFVAGDK-SHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYH 446
+ F AG+ HP + I LK+L M + GYVP+T VL+D+E+++K+ L++H
Sbjct: 484 GKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWH 543
Query: 447 SERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
SERLA+ +G++ GT IRI+KNLR+CGDCH +KFIS IV+REI+VRD +R+HHF++G
Sbjct: 544 SERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEG 603
Query: 507 KCSCGDYW 514
KCSC D+W
Sbjct: 604 KCSCNDFW 611
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 5/212 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+H I+ G D + + ++L+++Y KC + + +LF +P +D +SW SI+ +
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 122 LFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L M ++P H F+ I+ AC+ L L LGKQ+H + + F D+ +
Sbjct: 84 IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMY KCG AR +FD + + VSWT++I G A G +A+ LF Q
Sbjct: 144 SSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQ----APV 199
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
N ++ A+++ +G ++S FN M ++
Sbjct: 200 RNLFSWTALISGLIQSGHGIYSFSLFNEMRRE 231
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA + +LH II+ GFD + ++++LLD+Y KCG I A +FD+M D VSW
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 212 TAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLI 259
+++ + +S+ M DG++P+ F ++ ACS G +
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL 121
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 325/552 (58%), Gaps = 41/552 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D ++W +V+ L + L + L++ +G+ + L+PD F S+++ A+ +
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCA----------------------------- 90
G+++H + I + + SSL++MYAKC
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 91 --RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH-VSFSS 147
R E++ LF +LPVK+ SW ++I+G VQ+G E F +M ++ + SS
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ ACA+L G+Q+HG +I GFD +FI+++L+DMYAKC ++ A+ IF +M D
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSWT++I+G A HG A A++L++ M GVKPN V FV ++ ACSH G ++K F
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SMTKDYGI PS +HY + DLLGR+G L EA I M P E W LLSAC+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 328 ELAGKVAEKIF----MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACS 383
++ ++A+ + + DP+ Y++LSN YA+A W + R + ++K P S
Sbjct: 424 QMGIRIADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Query: 384 WIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME-QEGYVPDTKEVLHDVEEEQKKNL 442
+EV+ + F AG+ SHP I LK+L E M + GYVPDT +LHD++E++K+ L
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540
Query: 443 LYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHH 502
L++HSER A+ +G++ GT IRI+KNLRVCGDCH +K IS+I +REIIVRD +R+HH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600
Query: 503 FEDGKCSCGDYW 514
F+ GKCSC D+W
Sbjct: 601 FKGGKCSCNDFW 612
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H + ++ G+ + ++L+N+Y KC + ++F +P +D I+W S++ Q
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 120 NGLFDEGL-KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
L + L F + ++P FS+++ ACA+L ++ G+Q+H I + + ++
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSL+DMYAKCG + A+ +FD + + + +SWTA++ G A G +A+ LF +
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP--- 198
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
VK N ++ A+++ +G +A+S F M ++
Sbjct: 199 VK-NLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA TL K LH I++ G +A++L+++Y KCG A +FD+M D ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 212 TAVIMG-NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+V+ N + + G++P+ F A++ AC++ G ID
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 305/520 (58%), Gaps = 6/520 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV +L+SWN +I G G E+AL + ++M V D FT +S L +D + +G
Sbjct: 134 MPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEG 193
Query: 61 KEIHGYAIRHGL--DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+IH + I G N + +LI++Y KC ++ + R+F + K ISW ++I G
Sbjct: 194 NQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYA 253
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G E ++ FRQ+ + I+ SS+M A + GKQ+H I+ ++
Sbjct: 254 QEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDIS 313
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +S+LDMY KCG I A +F +M +++SWT +I G HG +AI LF++M+ D
Sbjct: 314 VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDS 373
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ V ++AVL CSH+GL++K YF+ + +GI EHYA + DLLGRAG+L+EA
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEA 433
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ +M +W TLLSACRVH ++EL +V + +D N YV++SN YA A
Sbjct: 434 KNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADA 493
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
WK+ +R +++K +KK SW+E+ + + F GD +HP +I+E LKE+ RM
Sbjct: 494 GYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRM 553
Query: 419 EQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIIC---TPDGTTIRIIKNLRVC 474
++E GYV K LHDVEEE K + L HSE+LAI ++C IR+ KNLRVC
Sbjct: 554 KEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVC 613
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GDCH IK +SKI++ +VRD +RFH FEDG CSC DYW
Sbjct: 614 GDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 177/345 (51%), Gaps = 18/345 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++ G +NG E+L + +MG +KP+ FT S+ L + G
Sbjct: 33 MLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIG 92
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH ++ G D +G+S+I+MY+KC R+ ++ +F ++PV++ ISWN++IAG
Sbjct: 93 RQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVA 152
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF--DDNMF 178
G ++ L F++M +F+S + AC+ L + G Q+H +I GF N
Sbjct: 153 GFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTA 212
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+A +L+D+Y KCG + +AR +F ++ ++SWTA+I+G A GN +++ LF Q+ +
Sbjct: 213 VAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESS 272
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA---AVADLLGRAGKL 295
++ + +++ + L+ + K PS + ++ D+ + G +
Sbjct: 273 IQVDGFILSSMMGVFADFALVQQGKQMHAFAIK----VPSGVDISVCNSILDMYLKCGMI 328
Query: 296 QEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
EA S M P NV W +++ H GK A ++F
Sbjct: 329 NEAERLFSEM---PARNVISWTVMITGYGKHG----LGKEAIRLF 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 111/192 (57%)
Query: 71 GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFF 130
G ++ + + LI MY KC R+ + +F + ++ +SW +++ G +QNG E L F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 131 RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC 190
+M ++ +KP +FS+ + AC L L +G+Q+H ++ GFD + +S++DMY+KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G I A C+F+ M + +++SW A+I G + G A+ LF++M++ G + F + L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 251 TACSHAGLIDKA 262
ACS G I +
Sbjct: 182 KACSDLGAIKEG 193
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/512 (40%), Positives = 307/512 (59%), Gaps = 3/512 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLVSW +I G +NGL E+A+ M + + PD T++SVL A + KG
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG 416
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +A R GL + V + +SLI+MY+KC ++ + +F +P K+ ISW SII G N
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FF+QM+++ +KP V+ S++ ACA + L GK++H +R G + F+
Sbjct: 477 YRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLP 535
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMY +CG + A F+ + D+ SW ++ G A G A+ LF +M + V
Sbjct: 536 NALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F ++L ACS +G++ YF SM + IAP+ +HYA+V DLLGRAG+L++AYE
Sbjct: 595 PDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYE 654
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P +W LL+ACR+++NVEL A+ IF +D ++G Y++L N YA + +
Sbjct: 655 FIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGK 714
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + A +R MR + P CSW+EV + +AF+ GD HP IN L+ E+ME
Sbjct: 715 WDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEA 774
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G + +K+ D + K + HSERLAI FG+I T GT I + KNL +C +CH
Sbjct: 775 TG-LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNT 833
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
+KFISK+V+R I VRD +FHHF+DG CSCGD
Sbjct: 834 VKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 194/359 (54%), Gaps = 15/359 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DL SWN ++ G A+ G ++EALN+ +M V ++PD +T VL D+ +G
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+H + IR+G +++V + ++LI MY KC + + +F +P +D ISWN++I+G +N
Sbjct: 215 REVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ EGL+ F M + P ++ +S++ AC L LG+++HG +I+ GF + +
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ M++ G A +F KM+ D+VSWTA+I G +G A+ + ME +GV
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQ 296
P+ + +VL+AC+ GL+DK M ++ Y VA D+ + +
Sbjct: 395 PDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDMYSKCRCID 449
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRV-HKNVELAGKVAEKIFMIDPNNMGAYVILS 352
+A E H P +NV W +++ R+ +++ E + I + PN++ +LS
Sbjct: 450 KALEV---FHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 130/248 (52%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
N++I+ L G E+AL + M + + + T ++L + +G +H Y +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
V +G++L++M+ + + ++ +F + +D SWN ++ G + G FDE L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
+ +ML I+P +F ++ C L L G+++H +IR GF+ ++ + ++L+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
CG+I AR +FD+M D +SW A+I G + + + LF M + V P+ + +V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 250 LTACSHAG 257
++AC G
Sbjct: 303 ISACEALG 310
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 304/514 (59%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ WN I +G +A++ + V +PD T + L AD + G
Sbjct: 119 MPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLG 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG IR G + +V + + +I++Y KC VE + +F + ++++SW +++A C QN
Sbjct: 179 RQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ F I+ SS++ A A ++ L G+ +H ++ + ++F+
Sbjct: 239 DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVG 298
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY KCG+I +F +M ++VSW A+I G A G+ A++LFE+M+ + V
Sbjct: 299 SALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV- 357
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V + VL+ACS G + F SM Y I P EHYA +AD+LGRAG ++ AYE
Sbjct: 358 ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYE 417
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ M PT +VW LL+ACRV+ EL A+ +F +DP + G +V+LSN +AAA R
Sbjct: 418 FVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGR 477
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +A +R M++ G+KK CSW+ KNK + F A D SH I L +L M+
Sbjct: 478 WDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQA 537
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY+PDT L+D+EEE+K + YHSE++A+ FG+I P G IRI KNLR+CGDCH+A
Sbjct: 538 AGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSA 597
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KFIS IV REIIVRDN+RFH F D +CSC D+W
Sbjct: 598 FKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 164/339 (48%), Gaps = 8/339 (2%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P +V+W +I G +NG + AL +M N+KP+ FT GK
Sbjct: 19 PTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGK 78
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH A++ G + +G S +MY+K ++ RLF +P ++ WN+ I+ V +G
Sbjct: 79 QIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDG 138
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ + F + +P ++F + + ACA L LG+QLHG +IR+GF+ ++ +A+
Sbjct: 139 RPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVAN 198
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
++D+Y KC + LA +F+ M + VSW ++ + A +F K+G++
Sbjct: 199 GIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIEL 258
Query: 242 NSVAFVAVLTACSHAGLIDKAWSY-FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+V++A +AG+ + +++ + +A+ D+ G+ G +++ +
Sbjct: 259 TDYMVSSVISA--YAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQ 316
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI 337
M P N+ W ++S +V++A + E++
Sbjct: 317 VFHEM---PERNLVSWNAMISGYAHQGDVDMAMTLFEEM 352
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 10/250 (4%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY+K + L L P + ++W ++I+G VQNG F L +F +M IKP +
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F A L GKQ+H ++ G ++ F+ S DMY+K G A+ +FD+M
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++ W A I L G AI F + + G +P+ + F A L AC+ A +D
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLD---- 176
Query: 265 YFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
I FE +VA D+ G+ +++ A E + N W T+++A
Sbjct: 177 -LGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELA-EMVFNGMGRRNSVSWCTMVAA 234
Query: 321 CRVHKNVELA 330
C + E A
Sbjct: 235 CEQNDEKEKA 244
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 313/541 (57%), Gaps = 35/541 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N +I G +E+ M + P SFT +++ +DV G++IHG I
Sbjct: 114 YNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTI 173
Query: 69 R-HGLDANVCIGSSLINMYAKC-------------------------------ARVEDSH 96
G ++ +G+S+I+MY KC +E +
Sbjct: 174 LVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAG 233
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
LF LPVKD ++W +++G QN E + FF +M ++ ++ ++ ACA L
Sbjct: 234 ELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLG 293
Query: 157 TLHLGKQLHGCIIRNGFDD--NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+ ++ F ++ + S+L+DMY+KCG++ A +F M ++ S++++
Sbjct: 294 AAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSM 353
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I+G A+HG HDA+ LF++M K +KPN V F+ VLTACSHAG++++ W F M K YG
Sbjct: 354 ILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYG 413
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
I PS +HY + DLLGRAG+LQEA+E + M P VW LL ACR+HK+ ++A A
Sbjct: 414 IKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAA 473
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV-KNKAYA 393
+F ++P +G Y++L+N YA+ RW D +++R MR +G++K PA SWIE K +
Sbjct: 474 NHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHE 533
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F +GD +HP I +AL++LL+R+E +GY P V +DV +E K+ +L HSE+LA+
Sbjct: 534 FFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALA 593
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG+I T G+ IRI+KNLR+C DCH+ I S+I REIIVRD RFHHF DG CSCG++
Sbjct: 594 FGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNF 653
Query: 514 W 514
W
Sbjct: 654 W 654
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--FCLLPVKDAISWNSIIAGCV 118
K++H + +GLD + + + LI K D + L F + + +N++I G +
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYL 122
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG-CIIRNGFDDNM 177
E +F+ M + P +F+++ AC + LG+Q+HG I+ GF +++
Sbjct: 123 IEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDL 182
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-------------- 223
+ +S++DMY KCG + R +FD+M D++SWT +I GN
Sbjct: 183 HVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVK 242
Query: 224 -----------------AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSY 265
+AI FE+M++ GV+ + + + V++AC+ G A W
Sbjct: 243 DMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIR 302
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ ++G S +A+ D+ + G + +AY M
Sbjct: 303 DVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGM 342
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI--------FA 52
+PV D+V+W ++ G A+N EA+ +M ++ D TL V+ +A
Sbjct: 239 LPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYA 298
Query: 53 DYV-DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN 111
D++ DV + E G +H +V +GS+LI+MY+KC V D++R+F + ++ S++
Sbjct: 299 DWIRDVAEKSEFGG---KH----SVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYS 351
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR- 170
S+I G +G + +K F +M+ +IKP V+F ++ AC+H + G Q+ + +
Sbjct: 352 SMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKC 411
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALH 221
G + + ++D+ + G ++ A + M + H V W A++ +H
Sbjct: 412 YGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGV-WGALLGACRIH 463
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 313/544 (57%), Gaps = 34/544 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN+++ G + G ++AL++ +M N + P++ T+ SV+ A +++ G+++
Sbjct: 307 DIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVC 366
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC------------------------ 100
Y R+ + N+ + ++ I+M+ KC VE + LF
Sbjct: 367 DYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHG 426
Query: 101 -------LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPA 151
+P KD +WN +I+G Q+G E L FR++ + K +P V+ S + A
Sbjct: 427 IARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSA 486
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA L + +G+ +HG I + N +A+SL+DMY+K G++ A +F + D+ W
Sbjct: 487 CAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVW 546
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+A+I G A+HG AI LF M++ VKPNSV F +L ACSH+GL+D+ F+ M +
Sbjct: 547 SAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAG 331
YG+ P +HY+ + D+LGRAG L+EA +FI M P+ +VW LL AC +H N+ELA
Sbjct: 607 VYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAE 666
Query: 332 KVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKA 391
K ++ I+P N GAYV+LSN YA W+ + LR MR+ G+KK CS IE+
Sbjct: 667 KACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTV 726
Query: 392 YAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHSERL 450
+ F+ GD +HP I L E++ R+ GYV +T +L VEEE+ K+ L HSE++
Sbjct: 727 HEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKM 786
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSC 510
AI FG+I IRI+KNLRVC DCHT K +SK+ R+I++RD RFHHF G CSC
Sbjct: 787 AIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSC 846
Query: 511 GDYW 514
DYW
Sbjct: 847 QDYW 850
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 178/366 (48%), Gaps = 38/366 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P +L SWN +I LA + + L +R + + P+ FT ++ A+ +
Sbjct: 199 IPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLV 258
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGC 117
GK +HG AI+ +V + +SLI+ YA C ++ ++ +F ++ KD +SWNS++ G
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGF 318
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQ G D+ L F +M + P V+ S+M ACA L LG+++ I RN N+
Sbjct: 319 VQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNL 378
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL---HGNAHD-------- 226
+ ++ +DM+ KCG + +AR +FD M+ D+VSWT +I G A HG A D
Sbjct: 379 NVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRK 438
Query: 227 --------------------AISLFE--QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
A+++F Q+ K G +P+ V ++ L+AC+ G +D
Sbjct: 439 DIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG-E 497
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+ + K I + ++ D+ ++G +++A E ++ VW +++ +H
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSI-GNKDVFVWSAMIAGLAMH 556
Query: 325 KNVELA 330
E A
Sbjct: 557 GRGEAA 562
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/516 (37%), Positives = 308/516 (59%), Gaps = 4/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V V++N I +R GL++ AL ++ +M + D +TL L A + +
Sbjct: 1 MVVPPGVAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNSAA--LLRLPA 58
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +R GL A++ + ++L++ YAK +R + +F +P +D +SW S++ G ++
Sbjct: 59 DALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARS 118
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D L+ +R M+ A + P + ++ + +CA T L LG+ +H +R D + +
Sbjct: 119 RSHDSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVG 178
Query: 181 SSLLDMYAKCGNIRLARCIFD--KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+SL+ MYAK G++ A+ +FD ++D D ++WTA+I+G A +G +++ ++ M + G
Sbjct: 179 NSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSG 238
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ V F+ +L ACSHAGL+D ++F SM ++GIAP +HYA + DLLGRAG+L EA
Sbjct: 239 CRPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEA 298
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ ++ VW LL+ACR H+N ELA A ++ +DP + YV+LSN Y+ A
Sbjct: 299 MDLLNRSTTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRA 358
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D A +R M+ +G+ K P CSW+ + F D+ HP + ++E+ ER+
Sbjct: 359 GRWGDVARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERI 418
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+GYV DT L D E ++ L +HSERLA+ FG++ P G IR+ KNLRVCGDCH
Sbjct: 419 RGQGYVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCH 478
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK +++ REI++RD++ FHH +DG CSCGDYW
Sbjct: 479 AAIKMVAQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 322/544 (59%), Gaps = 36/544 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S+L N + R GL +EAL ++ M + ++PD ++ S + + +++ GK
Sbjct: 299 SNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSC 358
Query: 64 HGYAIRHGLDA--NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
HGY +R+G ++ N+C ++LI+MY KC R + + R+F + K ++WNSI+AG ++NG
Sbjct: 359 HGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENG 416
Query: 122 -------------------------------LFDEGLKFFRQMLIAK-IKPRHVSFSSIM 149
+++E ++ F M + + V+ SI
Sbjct: 417 EVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIA 476
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC HL L L K ++ I +N ++ + ++L+DM+++CG+ A IF+ + D+
Sbjct: 477 SACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 536
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+WTA I A+ GN AI LF +M + G+KP+ V F+ LTAC H GL+ + FNSM
Sbjct: 537 AWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSM 596
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K +G++P HY + DLLGRAG L+EA + I +M P + +W +LL+ACRV NVE+
Sbjct: 597 EKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEM 656
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AEKI ++ P G+YV+LSN YA+A RW D A +R+ M+ KG++K P S I+++
Sbjct: 657 AAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRG 716
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + F +GD+SHP +I L EL +R G+VPD VL DV+E++K +L HSE+
Sbjct: 717 KTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEK 776
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ FG+I + GTTIRI+KNLRVC CH+ KF SK+ REII+RDN+RFH GKCS
Sbjct: 777 LAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCS 836
Query: 510 CGDY 513
C D+
Sbjct: 837 CSDF 840
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 132/248 (53%), Gaps = 1/248 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I G A +GL +EA+ + +M N + PD +T L + A D G +IHG I
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ ++ + +SL++ YA+C ++ + ++F + ++ +SW S+I G + + +
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 129 -FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FFR + + P V+ ++ ACA L L G++++ I +G + N + S+L+DMY
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KC I +A+ +FD+ ++ A+ G +A+ + M G++P+ ++ +
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISML 340
Query: 248 AVLTACSH 255
+ +++CS
Sbjct: 341 SAISSCSQ 348
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
+NS+I G +GL E + F +M+ + I P +F + CA G Q+HG II
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+ + ++F+ +SL+ YA+CG + AR +FD+M ++VSWT++I G A A DA+
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 230 LFEQMEKD-GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
LF +M +D V PNSV V V++AC+ ++ ++ +D GI + +A+ D+
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD-FIRDSGIEVNDLMISALVDM 279
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSWNT+I L + +YEEA+ + M + + D T+ S+ +
Sbjct: 428 MPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDL 487
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K I+ Y ++ + +V +G++L++M+++C E + +F L +D +W + I
Sbjct: 488 AKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 547
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMF 178
G + ++ F +M+ +KP V F + AC H + GK++ + + +G
Sbjct: 548 AGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDV 607
Query: 179 IASSLLDMYAKCGNIRLARCIFDKM--DLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++D+ + G + A + M + +D++ W +++ + GN A E+++
Sbjct: 608 HYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVI-WNSLLAACRVQGNVEMAAFAAEKIQ 665
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 319/537 (59%), Gaps = 31/537 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I G + + EEAL + M ++ +++T +L + + ++IH + I
Sbjct: 86 WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHII 145
Query: 69 RHGLDANVCIGSSLINMYAK-------------------------------CARVEDSHR 97
+ G + + +SL+N+Y+K C +E ++
Sbjct: 146 KMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYE 205
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F +P ++ ISW S+I+GCV G E L F +M A IK +V+ S + ACA L
Sbjct: 206 IFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGV 265
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L GK +H I ++ + + + L+DMYAKCG++ A +F KM+ + WTA+I G
Sbjct: 266 LDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+HG +A+ F +M+ GV+PN + F +LTACSHAGL+ +A F SM + +G P
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKP 385
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
S EHY + DLLGRAG L+EA E I NM P +W LL+AC +H N+EL ++ + +
Sbjct: 386 SIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKIL 445
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
+DP + G Y+ L++ +AAA W AA +R M+ +G+ K P CS I V A+ F+AG
Sbjct: 446 IQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAG 505
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII 457
D+SHP I+ L++++ER+ +EGY P ++L D+E+++K+ +++HSE+LA+ FG+I
Sbjct: 506 DESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565
Query: 458 CTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
T G TIRI+KNLRVC DCHT IK ISK+ REI++RD +RFH F+DG C+CGDYW
Sbjct: 566 STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW ++I G G +EALN+ +M +K D+ L S L AD + +G
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y +H ++ + +G LI+MYAKC +E++ +F + K W ++I+G +
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIH 329
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G E L++F +M A ++P ++F+ I+ AC+H +H K L + R +GF ++
Sbjct: 330 GRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEH 389
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G ++ A + + M + + W A++ +HGN
Sbjct: 390 YGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 434
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 152/331 (45%), Gaps = 45/331 (13%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAK--CARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++IHG ++ GL + S L+ A + + +F + + WN++I G
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ +E L + ML + +F ++ AC+ ++ +Q+H II+ GF ++
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIY 154
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHD------------------------------- 207
+SLL++Y+K G+I+ AR +FD++D D
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
I+SWT++I G G +A++LF +M+ G+K ++VA V+ L AC+ G++D+ + +
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG-KWIH 273
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
+ K + I + D+ + G L+EA E M +VW ++S +H
Sbjct: 274 AYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV-SVWTAMISGYAIHGR- 331
Query: 328 ELAGKVAEKIFM------IDPNNMGAYVILS 352
G+ A + FM ++PN M IL+
Sbjct: 332 ---GREALEWFMKMQTAGVEPNQMTFTGILT 359
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/511 (39%), Positives = 317/511 (62%), Gaps = 4/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V +IVG ++ G EA+ + M ++P+ +T +SVL + D+ GK IH
Sbjct: 213 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 272
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G ++ + +SL+ MY +C+ V+DS +F + + ++W S+I+G VQNG +
Sbjct: 273 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREE 332
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M+ +KP + SS + C++L G+Q+HG + + GFD + + S L+
Sbjct: 333 TALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLI 392
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
++Y KCG +AR +FD + D++S +I A +G +A+ LFE+M G++PN V
Sbjct: 393 ELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDV 452
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++VL AC+++GL+++ F+S KD I + +HYA + D+LGRAG+L+EA I+
Sbjct: 453 TVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRLEEAEMLITE 511
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ P +W TLLSAC+VH+ VE+A ++ KI I P + G ++LSN YA+ +WK
Sbjct: 512 V-TNPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRV 570
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK-SHPFYHRINEALKELLERMEQEGY 423
++ M+ +KK PA SW+E+ + + F+AGD SHP +I E L+EL+++ + GY
Sbjct: 571 IEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGY 630
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V D V D+EE K+ L+ HSE+LAI F + G +IRI+KNLRVC DCH+ IK
Sbjct: 631 VEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKI 689
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S+I++REII RD+ RFHHF DG CSCGDYW
Sbjct: 690 VSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 161/294 (54%), Gaps = 2/294 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +V+WN++I ++ +EA+ + R M + N+ PD +TLSSV F+D +
Sbjct: 107 MPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEA 166
Query: 61 KEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ HG A+ GL+ +NV +GS+L++MY K + ++ + + KD + ++I G Q
Sbjct: 167 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 226
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E +K F+ ML+ K++P +++S++ +C +L + GK +HG ++++GF+ +
Sbjct: 227 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 286
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY +C + + +F + + V+WT++I G +G A+ F +M +D V
Sbjct: 287 QTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSV 346
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
KPNS + L CS+ + ++ ++K YG + + +L G+ G
Sbjct: 347 KPNSFTLSSALRGCSNLAMFEEGRQVHGIVSK-YGFDRDKYAGSGLIELYGKCG 399
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T S +L D + K I ++ G + GS L++ KC + + +LF +
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGM 107
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
P + ++WNSIIA +++ E ++ +R M+ + P + SS+ A + L+ +
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQ 167
Query: 163 QLHGCIIRNGFD-DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+ HG + G + N+F+ S+L+DMY K G R A+ + D+++ D+V TA+I+G +
Sbjct: 168 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 227
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
G +A+ F+ M + V+PN + +VL +C +
Sbjct: 228 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 261
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+FS ++ C ++ K + ++++GF + S L+D KCG I AR +FD M
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGM 107
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
IV+W ++I H + +A+ ++ M + V P+ +V A S L +K
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSL-EKEA 166
Query: 264 SYFNSMTKDYGIAPSFEHY-AAVADLLGRAGKLQEA 298
+ + G+ S +A+ D+ + GK +EA
Sbjct: 167 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA 202
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/507 (40%), Positives = 314/507 (61%), Gaps = 1/507 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ T+I G +E AL +M ++PD+FT +L + +GK+IHG+
Sbjct: 101 FKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVF 160
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+A+V + +SLINMY +C +E S +F L K A SW+S+ + CV G++ E L
Sbjct: 161 KLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLM 220
Query: 129 FFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FR+M +K S + ACA+ L+LG +HG ++RN + N+ + +SL+DMY
Sbjct: 221 LFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMY 280
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG I A IF KM+ + ++++A+I G ALHG A+ +F +M K+G++P+ V +V
Sbjct: 281 VKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYV 340
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
++L ACSH+GL+ + F M K+ + P+ EHY + DLLGRAG L+EA E I ++
Sbjct: 341 SLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 400
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+ VW + LS CRVH+N+EL A+++ + +N G Y+++SN Y+ A W D A
Sbjct: 401 EQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARS 460
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R + KG+K+TP S ++VK K + FV+ D+SHP I + L ++ +++ EGY PD
Sbjct: 461 RTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDL 520
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
++L +V+EE+KK L HS+++AI F ++ TP G+ I+I +NLR+C DCHT K IS I
Sbjct: 521 TQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMI 580
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
+REI+VRD +RFH F+ G CSC DYW
Sbjct: 581 YEREIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
SW+++ G++ E L + R+M NLK + + S L A+ + G IHG+
Sbjct: 201 SWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGF 260
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+R+ + N+ + +SL++MY KC ++++ +F + ++ ++++++I+G +G +
Sbjct: 261 LLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESA 320
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
L+ F +M+ ++P HV + S++ AC+H + G+++ G +++ G
Sbjct: 321 LRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEG 366
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 309/511 (60%), Gaps = 5/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++NT+I A + +L++ +M + PD FT VL A + G ++H
Sbjct: 52 DTFAFNTIIRAHA-DSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACAR---LQTGLDLH 107
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G D++V + + LI+ Y C ++ + ++F +P +D +SW+S+IA +NG
Sbjct: 108 SLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGY 167
Query: 125 EGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L F++M L+ +KP V S++ A + L L LGK + G I RNG + + + ++L
Sbjct: 168 EALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTAL 227
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DM+++CG I + +FD+M ++++WTA+I G A+HG + +A+ +F +M G +P+
Sbjct: 228 VDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDH 287
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F VL ACSH GL+ + W F S+ +YG+ P EHY + DLLGRAG L EA +F+
Sbjct: 288 VTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVD 347
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P +W TLL AC H +ELA KV EKI +D + G YV+LSN Y RW +
Sbjct: 348 GMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAE 407
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
A +R MR K + K P CS I V + + FVAGD +HP + I E L +++ ++ GY
Sbjct: 408 KAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGY 467
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
PD VL D+EEE+K++ L YHSE+LA+ F ++C D TIR++KNLR+C DCH +K+
Sbjct: 468 TPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKY 527
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + +REII+RD +RFHHF G CSC DYW
Sbjct: 528 ASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
MP DLVSW+++I A+NG EAL + ++M V +KPD + SV+ + D+
Sbjct: 145 MPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLEL 204
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK I G+ R+GL+ V +G++L++M+++C +E+S R+F + ++ ++W ++I G
Sbjct: 205 GKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAV 264
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+G E L+ F +M +P HV+F+ ++ AC+H
Sbjct: 265 HGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSH 299
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 310/515 (60%), Gaps = 4/515 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D WN +I L + +EAL + RQM + P T + L D +G
Sbjct: 65 VRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHSRDFSEGLR 124
Query: 63 IHGYAIRHGLDANVCIGSSLIN-MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
IH +A G DA+ + ++L+N MYA+ +ED+ +F + ++ ISW +++ Q G
Sbjct: 125 IHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLG 184
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L E L+ FR +L+ + P V+F++++ A +L ++ K + C+ GF N+ +A+
Sbjct: 185 LNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAAKLVQACLSETGFLGNVEVAN 244
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
LL KCG++ F M + + VSW + I NA HGN + LF+ M+ +G+
Sbjct: 245 GLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQTMQLEGIDT 304
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
SV + VL++CSHAGL+ + +SYF +M DYG+ EHY+ V DLL RAG L+ A EF
Sbjct: 305 GSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGLPAEAEHYSCVIDLLSRAGWLEHAEEF 364
Query: 302 ISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ + G E+V W+TLL C++H ++E G+ ++I ++P + G Y+++ N YA A
Sbjct: 365 VKRLPFG-DESVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAG 423
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W +AA++R M + G KK P SWIEVK + + F GD SHP I+ L+ L ++M+
Sbjct: 424 KWPEAAAVRKSMVDLGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNDKMK 483
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ G+V DTK V++D++ ++K++LL HSE+LAI FG+I T G +RI+KNLRVC DCH+
Sbjct: 484 RAGFVCDTKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHS 543
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A KFIS +V REI+VRD RFHHF G CSC D+W
Sbjct: 544 ATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 578
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 7/258 (2%)
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
L+ +V + ++++N Y KC ++ + LF + V+DA WN++I+ V + DE L+ R
Sbjct: 33 LELDVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCR 92
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD-MYAKC 190
QM + + P + + + AC H G ++H G D + + ++L++ MYA+
Sbjct: 93 QMRLDGVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARL 152
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
G++ AR IFD M +++SWTA++ ++ G +A+ +F + +GV PN V F AVL
Sbjct: 153 GSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVL 212
Query: 251 TACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPT 310
A + I +A + + G + E + LG+ G L+E +F M P
Sbjct: 213 NASGNLASI-RAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVM---PV 268
Query: 311 EN--VWLTLLSACRVHKN 326
+N W + ++A H N
Sbjct: 269 QNQVSWNSAIAANAQHGN 286
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW ++ ++ GL EAL I R + + P+ T ++VL + +
Sbjct: 165 MTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAA 224
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + G NV + + L+ KC +E+ + F ++PV++ +SWNS IA Q+
Sbjct: 225 KLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQH 284
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ----LHGCIIRNGFDDN 176
G G++ F+ M + I V+ ++ +C+H + G +H + G
Sbjct: 285 GNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH---VDYGLPAE 341
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGN 223
S ++D+ ++ G + A ++ D + W ++ G LHG+
Sbjct: 342 AEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGD 390
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 140 PRHVSFSSIMPACAHLTTLH-LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P V++ +I+ AC H + + ++ C + ++ +A+++++ Y KCG++ AR
Sbjct: 2 PNDVTYVAILGACGHPWEVDTIRARVEAC---GSLELDVIVATAVMNAYGKCGDLDSARG 58
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD++ + D W A+I +H +A+ L QM DGV P+ VA L AC H+
Sbjct: 59 LFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHSRD 118
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLT 316
+ + G A + A V + R G L++A E M T NV W
Sbjct: 119 FSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAM---TTRNVISWTA 175
Query: 317 LLSACRVHKNVELAGKVAEKIFM------IDPNNMGAYVILSNT 354
++ VH + L + A +IF + PN++ +L+ +
Sbjct: 176 MVG---VHSQLGL-NREALRIFRSILLEGVTPNDVTFTAVLNAS 215
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 315/519 (60%), Gaps = 5/519 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSWN VI N +++AL + M L+ + FTL S+L D+
Sbjct: 423 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLA 482
Query: 61 KEIHGYAIRHGLDAN-VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH A G N +G+S++NMYA+C + D+ + F L K ++W+ I+A Q
Sbjct: 483 RQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQ 542
Query: 120 --NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDN 176
+G KFF++M IKP V+F S + ACA + TL G+ +H +GF + +
Sbjct: 543 SKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETS 602
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + +++++MY KCG+ A+ +FD+M ++SW ++I+ A +G+A +A+S ++M
Sbjct: 603 LVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLL 662
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G P+S V++L SHAGL+++ +F S +D+G+ PS + DLL R G L
Sbjct: 663 QGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLD 722
Query: 297 EAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
A E I A + + W+TLL+AC+ + + + + AE++F ++P + G++V+L+N Y
Sbjct: 723 AAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLY 782
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A+ RW DA+ +R M +KK P CSWIE+ + F++G+ HP I E L++L
Sbjct: 783 ASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLT 842
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
RM + GYVPDT V+HDVEE K+ +L HSERLAIVFG++ T G TIR++KNLRVC
Sbjct: 843 LRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCS 902
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A K IS +V REI+VRD+SRFHHF+ G+CSCGD+W
Sbjct: 903 DCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 184/367 (50%), Gaps = 34/367 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + D+VSW ++ A+NG + +AL + +M +KP+ T +++ + A + G
Sbjct: 119 MLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLG 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH I GL+ + +G++L++MY C +D +F + + W ++IAGC QN
Sbjct: 179 RKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++EGL FR+M + +K V++ S++ C +L + G+ + I+ + F + +A
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ +Y +CG + A+ + + M D+V+W A++ A +G+ +AI L +M+ +G
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358
Query: 241 PNSVAFVAVLTACS-----------HA-----GLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
N V +++VL AC+ HA GL+ + + NS+ YG E +
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418
Query: 285 VADLLGRA---------------GKLQEAYEFISNMHAG---PTENVWLTLLSACRVHKN 326
V + + R K Q+A E M E L+LL AC ++
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLED 478
Query: 327 VELAGKV 333
++LA ++
Sbjct: 479 LKLARQI 485
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 163/317 (51%), Gaps = 2/317 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ SW ++ ++NG Y EAL + +M +PD L A ++ G++IH
Sbjct: 22 NVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIH 81
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ GL +N+ I +SL+NMY KC V + ++F + ++D +SW +++A QNG +
Sbjct: 82 SSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWS 141
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L+ +M +KP V+F +I+ CA L L LG+++H II G + + + ++L+
Sbjct: 142 QALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALV 201
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY CG+ + +F +M ++ WT +I G + +G + + +F +M+ +GVK N V
Sbjct: 202 HMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEV 261
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+++++ C + + K ++ + S ++ L G+ G L A + +
Sbjct: 262 TYMSMVEVCRNLDAV-KEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEH 320
Query: 305 MHAGPTENVWLTLLSAC 321
M+ W +++AC
Sbjct: 321 MYQRDV-VAWNAMVTAC 336
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 154/305 (50%), Gaps = 4/305 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN ++ A+NG EA++++R+M + T SVL A+ + +G+EIH
Sbjct: 325 DVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIH 384
Query: 65 GYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
+ GL V +G+S+I MY KC + E + +F +P KD +SWN++I V N F
Sbjct: 385 ARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKF 444
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFIASS 182
+ L+ F M + ++ + S++ AC L L L +Q+H GF N + +S
Sbjct: 445 QDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNS 504
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH--GNAHDAISLFEQMEKDGVK 240
+++MYA+CG++ A+ FD ++ +V+W+ ++ A G A F++ME +G+K
Sbjct: 505 VVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIK 564
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P V FV+ L AC+ ++ S + S + ++ G+ G +A
Sbjct: 565 PGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKL 624
Query: 301 FISNM 305
M
Sbjct: 625 VFDQM 629
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY KCARV D+ +F + K+ SW ++A QNG + E L+ F +M +P V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
F + ACA L G+Q+H ++ +G N+ I++SL++MY KC ++ A +FD M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
L D+VSWTA++ A +G A+ +M+ +GVKPN V FV ++ C+ L+D
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+ + + G+ P A+ + G G + S M + +W T+++ C +
Sbjct: 181 IHHRIINE-GLEPDGILGNALVHMYGSCGSFDDMKSVFSRM-GQSSVLLWTTMIAGCSQN 238
Query: 325 KNVE 328
E
Sbjct: 239 GQYE 242
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/548 (37%), Positives = 322/548 (58%), Gaps = 34/548 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VSW +++ + + L+++ M + L+PD F + ++ + +
Sbjct: 64 MPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRL 123
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H + + + SSLI+MY KC + +++ +F + K+++SW S+I+G +
Sbjct: 124 GKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYAR 183
Query: 120 NGLFDEGLKFFRQ-----------MLIAKIKPRH---------------------VSFSS 147
+G E + F Q ++ I+ H + SS
Sbjct: 184 SGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSS 243
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ CA+L L LGKQ+HG +I GF+ +FI+++L+DMYAKC +I A+ IF +M D
Sbjct: 244 VVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKD 303
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
++SWT++I+G A HG A +A++L+++M +KPN V FV +L ACSHAGL+ + F
Sbjct: 304 VISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFR 363
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SMT DY I PS +HY + DLL R+G L EA + + P E W +LLSAC H N+
Sbjct: 364 SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNL 423
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
E+ ++A+++ + P + Y++LSN YA A W + +R M + ++K P S I+
Sbjct: 424 EMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDF 483
Query: 388 KNKAYAFVAGDK-SHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYH 446
+ F AG+ HP + I LK+L M + GYVP+T VL+D+E+++K+ L++H
Sbjct: 484 GKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWH 543
Query: 447 SERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
SERLA+ +G++ GT IRI+KNLR+CGDCH +KFIS IV+REI+VRD +R+HHF++G
Sbjct: 544 SERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEG 603
Query: 507 KCSCGDYW 514
KCSC D+W
Sbjct: 604 KCSCNDFW 611
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 5/212 (2%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+H I+ G D + + ++L+++Y KC + + +LF +P +D +SW SI+ +
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 122 LFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L M ++P H F+ I+ AC+ L L LGKQ+H + + F D+ +
Sbjct: 84 IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSL+DMY KCG AR +FD + + VSWT++I G A G +A+ LF Q
Sbjct: 144 SSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQ----APV 199
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
N ++ A+++ +G ++S FN M ++
Sbjct: 200 RNLFSWTALISGLIQSGHGIYSFSLFNEMRRE 231
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA + +LH II+ GFD + ++++LLD+Y KCG I A +FD+M D VSW
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 212 TAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLI 259
+++ + +S+ M DG++P+ F ++ ACS G +
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL 121
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/515 (38%), Positives = 307/515 (59%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M V V++N I +R GL++ AL + +M L D +T +L A
Sbjct: 1 MVVPPGVAYNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAA 60
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+H +R GL A++ + ++L++ YAK +R + LF +P +D ++W S++ G +
Sbjct: 61 ADALHALLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLAR 120
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G D L+ +R M+ + ++P ++ + +CA TTL LG+ +H +R G + + +
Sbjct: 121 SGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSV 180
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MYAK G++R AR +FD L V+WTA+I+G A +G +++ ++ +M G
Sbjct: 181 GNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGC 240
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V F+ +L ACSHAGL+D ++F SM D+GI P +HYA + D+LGRAG+L EA
Sbjct: 241 RPDYVTFIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAM 300
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E + VW LL ACR H+N ELA + AE ++ +DP + Y++LSN Y+ R
Sbjct: 301 ELLDQSTMKLDATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRER 360
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D A +R M+++G+ K P CSW+ + F D+ HP I ++E++E++
Sbjct: 361 RWSDVARIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVR 420
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
EG+V DT L D E ++ L +HSERLA+ FG++ P G +R+ KNLRVCGDCH
Sbjct: 421 AEGFVADTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHV 480
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ++K+ REII+RD++ FHH DG CSCGDYW
Sbjct: 481 AIKMVAKVYGREIILRDSNCFHHMRDGVCSCGDYW 515
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/536 (37%), Positives = 323/536 (60%), Gaps = 30/536 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ +I G +G Y EA+ + +M + ++ PD++ ++S+L + + +G+E+H A+
Sbjct: 115 YTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRAL 174
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV------------------------ 104
+ G +N + ++ +Y KC + D+ R+F +P
Sbjct: 175 KLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAV 234
Query: 105 ------KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
KD + W ++I G V+N + L+ FR M ++P + ++ AC+ L L
Sbjct: 235 FSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGAL 294
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+G+ +H + + + N+F+ ++L++MY++CG+I A+ +FD+M D++++ +I G
Sbjct: 295 EIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGL 354
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+++G + AI LF M ++P +V FV VL ACSH GL+D + F+SM +DY + P
Sbjct: 355 SMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQ 414
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
EHY + DLLGR G+L+EAY+ I M P + TLLSAC++HKN+EL +VA+++
Sbjct: 415 IEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELE 474
Query: 339 MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGD 398
+ G YV+LS+ YA++ +WK+AA +R M+ GM+K P CS IEV N+ + F+ GD
Sbjct: 475 DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD 534
Query: 399 KSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIIC 458
HP RI E L+EL + EGY P+ + VL D+E+ +K+ L HSERLAI +G+I
Sbjct: 535 LRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLIS 594
Query: 459 TPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
T T IR++KNLRVC DCH+AIK I+KI +R+I+VRD +RFH+FE+G CSCGDYW
Sbjct: 595 TEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 121/235 (51%), Gaps = 6/235 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V W +I G RN AL R M N++P+ FT+ VL + + G+ +H
Sbjct: 242 DTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 301
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + ++ N+ +G++LINMY++C ++++ +F + +D I++N++I+G NG
Sbjct: 302 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 361
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSL 183
+ ++ FR M+ +++P +V+F ++ AC+H + G ++ + R+ + + +
Sbjct: 362 QAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCM 421
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEKD 237
+D+ + G + A + M + + +++G L H + L EQ+ K+
Sbjct: 422 VDLLGRVGRLEEAYDLIRTMKM----TPDHIMLGTLLSACKMHKNLELGEQVAKE 472
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 31/273 (11%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH IR+G + + L+ +KC ++ + R+F + + ++I G V +G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ E ++ + +ML I P + +SI+ AC L G+++H ++ GF N +
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187
Query: 183 LLDMYAKCGNIRLARCIFDKMD------------------------------LHDIVSWT 212
++++Y KCG + AR +F++M D V WT
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G + + A+ F M+ + V+PN V VL+ACS G ++ + +S +
Sbjct: 248 AMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRK 306
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ I + A+ ++ R G + EA M
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
+H +IRNG + F+ LL +KC I A IF ++ +TA+I G GN
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA 283
+AI L+ +M + + P++ ++L AC + L + +S G + +
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACG-SQLALREGREVHSRALKLGFSSNRLVRL 186
Query: 284 AVADLLGRAGKLQEAYEFISNMHAGPTENVWLT-LLSACRVHKNVELAGKVAEKI 337
+ +L G+ G+L +A M P + V T ++S+ VE AG V ++
Sbjct: 187 RIMELYGKCGELGDARRVFEEM---PEDVVASTVMISSYSDQGLVEEAGAVFSRV 238
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/539 (37%), Positives = 315/539 (58%), Gaps = 37/539 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+ + I + GL+ L ++ M + L P + TLS+ LP + G+ +H YA
Sbjct: 90 YTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRG---LSLGRALHAYAF 146
Query: 69 RHGLDANVCIGSSLINMY-------------------------------AKCARVEDSHR 97
+ L + + ++L++MY A ++D+ R
Sbjct: 147 KLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARR 206
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF LP KD I WN++I G Q+G +E L+ FR+ML + +P V+ ++ A A L T
Sbjct: 207 LFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGT 266
Query: 158 LHLGKQLHGCIIRNG--FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ GK LH ++N N+ +A++L+DMY KCG++ A +F + DIV W A+I
Sbjct: 267 VESGKWLHS-YVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMI 325
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G A+HG++ A+ +F Q+ G+ P + F+ +L ACSH+GL+++ S+F SM +YGI
Sbjct: 326 NGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGI 385
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
P EHY + DLLGRAG ++EA+ + ++ P +W++LL+ACR+HKN+ L ++A+
Sbjct: 386 DPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIAD 445
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
+ N G Y++LSN YAA +W++ A +R M+ G++K P CS IE+ K Y FV
Sbjct: 446 FLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFV 505
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFG 455
AGD SHP I L ++ +++ G+VP T+ VLHD++E K+ L HSE+LA+ FG
Sbjct: 506 AGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFG 565
Query: 456 IICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+I + G+TI+I+KNLR C DCH +K ISKI R+I+ RD +RFHHF DG C+CGDYW
Sbjct: 566 LISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D + WN +I G ++G EAL + R+M + +PD T+ VL A V G
Sbjct: 211 LPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESG 270
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H Y + NV + ++L++MY KC +ED+ +F + KD + WN++I G
Sbjct: 271 KWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAM 330
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G + L+ F Q+ + P ++F ++ AC+H + G+ + G D +
Sbjct: 331 HGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIE 390
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G I A + + + D V W +++ LH N
Sbjct: 391 HYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKN 436
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 34/271 (12%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ E+H +R GLD++ + L YA R++ S L I + S I
Sbjct: 39 RASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHS 98
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
GL GL ML + P + S+ +PAC L+ LG+ LH + + +
Sbjct: 99 SRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLS---LGRALHAYAFKLALSGDSY 155
Query: 179 IASSLLDM-------------------------------YAKCGNIRLARCIFDKMDLHD 207
+A++LL M YA G + AR +FD + D
Sbjct: 156 VATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKD 215
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+ W A+I G HG ++A+ LF +M + +P+ V V VL+A + G ++ +
Sbjct: 216 FICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHS 275
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ + + A+ D+ + G L++A
Sbjct: 276 YVKNSRCVQLNVRVATALVDMYCKCGSLEDA 306
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S++ AC +T +LH ++R G D + +A L YA G + + + +
Sbjct: 28 ASLLAAC---STARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKD 84
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+ +T+ I ++ G ++L M +G+ P + A L AC
Sbjct: 85 PTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC 132
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/515 (38%), Positives = 312/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI-K 59
MP D+V+WN +I G A + ++AL + M + + T+ SVL D++ +
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H Y + G +++ + +SLI MYAKC + S LF L ++ I+WN+++A
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E LK +M + SFS + A A L L G+QLHG ++ GF+ + FI
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++ DMY+KCG I + + SW +I HG + + F +M + G+
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP V FV++LTACSH GL+DK +Y++ + +D+G+ P+ EH V DLLGR+G+L EA
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FIS M P + VW +LL++C++H N++ K AE + ++P + YV+ SN +A
Sbjct: 723 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D ++R M K +KK ACSW+++K+K +F GD++HP I L+++ + ++
Sbjct: 783 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 842
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYV DT + L D +EEQK++ L+ HSERLA+ + ++ TP+G+T+RI KNLR+C DCH+
Sbjct: 843 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 902
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S+++ R I++RD RFHHFE G CSC DYW
Sbjct: 903 VYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
M D +SWN++ A+NG EE+ I M + + +S T+S++L + +VD K
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG-HVDHQKW 279
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG ++ G D+ VC+ ++L+ MYA R +++ +F +P KD ISWNS++A V
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L M+ + +V+F+S + AC G+ LHG ++ +G N I
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY K G + +R + +M D+V+W A+I G A + A++ F+ M +GV
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 240 KPNSVAFVAVLTAC 253
N + V+VL+AC
Sbjct: 460 SSNYITVVSVLSAC 473
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 138/256 (53%), Gaps = 1/256 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MPV + VSWNT++ G+ R GLY E + R+M ++ +KP SF ++S++ + +
Sbjct: 18 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++HG+ + GL ++V + ++++++Y V S ++F +P ++ +SW S++ G
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E + ++ M + S S ++ +C L LG+Q+ G ++++G + + +
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ M GN+ A IFD+M D +SW ++ A +G+ ++ +F M +
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257
Query: 240 KPNSVAFVAVLTACSH 255
+ NS +L+ H
Sbjct: 258 EVNSTTVSTLLSVLGH 273
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++VG + G EE ++I + M + + ++S V+ D G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I G ++ GL++ + + +SLI+M V+ ++ +F + +D ISWNSI A QN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + F M + + S+++ H+ G+ +HG +++ GFD + +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYA G A +F +M D++SW +++ G + DA+ L M G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
N V F + L AC +K
Sbjct: 360 VNYVTFTSALAACFTPDFFEKG 381
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY K RV+ + LF ++PV++ +SWN++++G V+ GL+ EG++FFR+M IKP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 145 FSSIMPACAHLTTL-HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+S++ AC ++ G Q+HG + ++G ++++++++L +Y G + +R +F++M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
++VSWT++++G + G + I +++ M +GV N + V+++C
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MY K G ++ AR +FD M + + VSW ++ G G + + F +M G+KP+S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+++TAC +G + + + G+ A+ L G G + + + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 306 HAGPTENV--WLTLL 318
P NV W +L+
Sbjct: 121 ---PDRNVVSWTSLM 132
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 294/487 (60%)
Query: 28 IVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYA 87
I QM + PDS T +VL A GK IH I+ G ++NV + ++L+NMY
Sbjct: 129 IYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYG 188
Query: 88 KCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
C+ V D+ ++F +P ++ +SWN++I G N +F + + FR+M IA KP V+
Sbjct: 189 TCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVG 248
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
++ ACAHL L+ G+ + I N N+F+ ++L+DMYAKCG + A IF M + +
Sbjct: 249 VLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKN 308
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+ +W +I G A++G A+ F +M + KP+ V F+ VL AC H GL+++ +YF
Sbjct: 309 VYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFT 368
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SM +++G+ P EHY + DLLGRAG L EA + I M P +W LL ACR+H N+
Sbjct: 369 SMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNI 428
Query: 328 ELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEV 387
+L +K+ ++PNN YV+L+N YA +RW +R M + ++K P CS IE+
Sbjct: 429 QLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEI 488
Query: 388 KNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
N Y FV + P + + + L ++ ++++ GYV DT +D+EEE+K++ L YHS
Sbjct: 489 DNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHS 548
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
E+LA+ FG++ +P G T+RI+KNLR+C DCH K +SK+ +R+I VRD +RFHHF G
Sbjct: 549 EKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGA 608
Query: 508 CSCGDYW 514
CSC DYW
Sbjct: 609 CSCKDYW 615
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++VSWN +I G N ++ + +++ R+M KP T+ VL A + +G
Sbjct: 203 IPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQG 262
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y + L NV +G++LI+MYAKC V+++ ++F + VK+ +WN +I+G N
Sbjct: 263 RWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMN 322
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + L+ F +M++ K KP V+F ++ AC H ++ G+ + G +
Sbjct: 323 GRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEH 382
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A+ + M + D + W ++ +HGN
Sbjct: 383 YGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGN 427
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/518 (40%), Positives = 318/518 (61%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VSWN+ I LA + +A+ +M KP+ T ++L + +
Sbjct: 517 MPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLEL 576
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCV 118
G++IH ++H + + I ++L+ Y KC ++ED +F + + D +SWN++I+G +
Sbjct: 577 GRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI 636
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG+ + + M+ + + ++++ ACA + TL G ++H C IR + +
Sbjct: 637 HNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVV 696
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+DMYAKCG I A F+ M + +I SW ++I G A HG+ A+ LF QM++ G
Sbjct: 697 VGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHG 756
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ V FV VL+ACSH GL+D+ + +F SM + Y +AP EH++ + DLLGRAG +++
Sbjct: 757 QLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKL 816
Query: 299 YEFISNMHAGPTENVWLTLLSA-CRVH-KNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EFI M P +W T+L A CR + +N EL + A+ + ++P N YV+LSN +A
Sbjct: 817 EEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHA 876
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A +W+D R+ MRN +KK CSW+ +K+ + FVAGD++HP +I + LKE++
Sbjct: 877 AGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMN 936
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+M GYVP+TK L+D+E E K+ LL YHSE+LAI F ++ IRIIKNLRVCGD
Sbjct: 937 KMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRIIKNLRVCGD 995
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CHTA K+IS IV R+II+RD++RFHHF+ G CSC DYW
Sbjct: 996 CHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 172/342 (50%), Gaps = 12/342 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSWN++I GL N +EEA+ M + P F++ S L A ++ G
Sbjct: 416 MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLG 475
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG-CVQ 119
++IHG I+ GLD +V + ++L+ +YA+ +E+ ++F L+P D +SWNS I
Sbjct: 476 QQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATS 535
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ +K+F +M+ A KP V+F +I+ A + L+ L LG+Q+H I+++ D+ I
Sbjct: 536 EASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAI 595
Query: 180 ASSLLDMYAKCGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++LL Y KC + IF +M + D VSW A+I G +G H A+ L M + G
Sbjct: 596 ENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKG 655
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ + VL+AC+ +++ + + +A+ D+ + GK+ A
Sbjct: 656 QRLDDFTLATVLSACASVATLERGMEVHACAIRA-CLEAEVVVGSALVDMYAKCGKIDYA 714
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
F M P N+ W +++S H + G A K+F
Sbjct: 715 SRFFELM---PVRNIYSWNSMISGYARHGH----GGKALKLF 749
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI----KGKE 62
V+ N ++VGLAR EEA I ++M ++ ++ ++ + + +L F ++ ++ KG+E
Sbjct: 317 VTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQE 375
Query: 63 IHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H Y IR+ L D + IG++L+N+YAKC ++++ +F L+P KD +SWNSII+G N
Sbjct: 376 VHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNE 435
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F+E + F M + P S S + +CA L + LG+Q+HG I+ G D ++ +++
Sbjct: 436 RFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSN 495
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL-HGNAHDAISLFEQMEKDGVK 240
+LL +YA+ + + +F M +D VSW + I A + AI F +M + G K
Sbjct: 496 ALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWK 555
Query: 241 PNSVAFVAV 249
PN V F+ +
Sbjct: 556 PNRVTFINI 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 120/227 (52%), Gaps = 11/227 (4%)
Query: 51 FADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISW 110
+ D V ++H + GL ++V ++L+N++ + + + +LF +P K+ +SW
Sbjct: 49 YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSW 108
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCI 168
+ +++G QNG+ DE FR ++ A + P H + S + AC L L LG ++HG I
Sbjct: 109 SCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLI 168
Query: 169 IRNGFDDNMFIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
++ + +M +++ L+ MY+ C +I AR +F+++ + SW ++I G+A A
Sbjct: 169 SKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISA 228
Query: 228 ISLFEQMEKDGV----KPNSVAFVAVLT-ACSHAGLIDKAWSYFNSM 269
LF M+++ +PN F +++T ACS L+D + M
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQM 272
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 143/261 (54%), Gaps = 10/261 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY-VDVIK 59
MP +LVSW+ ++ G A+NG+ +EA + R + + L P+ + + S L + +++K
Sbjct: 100 MPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLK 159
Query: 60 -GKEIHGYAIRHGLDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G EIHG + +++ + + L++MY+ C A ++D+ R+F + +K + SWNSII+
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVY 219
Query: 118 VQNGLFDEGLKFF----RQMLIAKIKPRHVSFSSIMPACAHLTT--LHLGKQLHGCIIRN 171
+ G K F R+ +P +F S++ L L L +Q+ I ++
Sbjct: 220 CRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKS 279
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
F ++++ S+L+ +A+ G I A+ IF++MD + V+ +++G A +A +F
Sbjct: 280 SFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF 339
Query: 232 EQMEKDGVKPNSVAFVAVLTA 252
++M KD V+ N+ ++ +L+A
Sbjct: 340 KEM-KDLVEINASSYAVLLSA 359
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 312/510 (61%), Gaps = 5/510 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT+I G AR+ EA+++ M + D++T VL A V G+ H ++
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G +++ + ++LI Y C + +F V+D ++WN +I + GL ++
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 130 FRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGC---IIRNGFDDNMFIASSLLD 185
+M + ++P V+ S++PACA L L GK LH + + + ++ + ++L+D
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVD 259
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAKCG+I LA +F +M + ++ +W A+I G A+HG+ DAISLF+QME D + P+ V
Sbjct: 260 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 319
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
F+A+L ACSHAGL+D+ + F +M + I P EHY V DLL RA K+ +A FI NM
Sbjct: 320 FIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM 379
Query: 306 HAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAA 365
+W TLL ACR + +LA K+ ++ ++P++ G YV+LSN YA +W A
Sbjct: 380 PIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHAL 439
Query: 366 SLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE-GYV 424
LR M+NKG++KTP CSWIE+ + FVAGD+SH +I ++E+ R+ + G+V
Sbjct: 440 KLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHV 499
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P T VL D+EEE+K++ L+ HSE+LAI G+I TP G+ IRI+KNLRVC DCH+ +K
Sbjct: 500 PGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVT 559
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REI+ RD SRFHHF++G CSC D+W
Sbjct: 560 SKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYA--KCARVEDSHRLFCLLPVKDAISWNSII 114
+ K K+ H +R L N S LI+ A + + +LF + D N++I
Sbjct: 24 ISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMI 83
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G ++ E + + M+ + + ++ ++ ACA L + LG++ H +++NGF
Sbjct: 84 RGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFG 143
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+ Y CG+ A +FD+ + D+V+W +I + G + A L ++M
Sbjct: 144 SDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM 203
Query: 235 EK-DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD---YGIAPSFEHYAAVADLLG 290
K D ++P+ V V+++ AC+ G +++ + +S +K+ + I A+ D+
Sbjct: 204 TKLDNLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKELDKFEINCDLVLETALVDMYA 262
Query: 291 RAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
+ G + A + M NV W L+ +H + E A
Sbjct: 263 KCGSIDLALQVFRRMR---VRNVFTWNALIGGLAMHGHGEDA 301
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V ++ +WN +I GLA +G E+A+++ QM + L PD T ++L + V +G
Sbjct: 277 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 336
Query: 61 KEI-----HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
+ + + I ++ C+ +++ + +V+D+ +P+K +++ W +++
Sbjct: 337 LAMFQAMKNKFQIEPRMEHYGCV----VDLLCRARKVDDALAFIENMPIKANSVLWATLL 392
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKP----RHVSFSSIMPACAHLT-TLHLGKQL 164
C G FD K R+++ +++P R+V S++ + L L KQ+
Sbjct: 393 GACRSGGHFDLAEKIGRRVI--ELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 445
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA--KCGNIRLARCIFDKMDLHDIVS 210
H T++ KQ H ++R N +S L+ A G++ AR +F +M D
Sbjct: 19 THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+I G A N ++A+SL+ M + GV ++ + VL AC+ G +
Sbjct: 79 CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAV 127
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/503 (40%), Positives = 313/503 (62%), Gaps = 3/503 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
W + +G +RNG +EAL + +M + +F S L +D D+ G+ +H +
Sbjct: 145 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVL 204
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ D + + ++L+ +Y++ E++ R+F +P ++ +SWNS+IAG V+ E ++
Sbjct: 205 KATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIE 264
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
FR M + V+ ++I+P CA +T L GK++H I+++ + + +SL+DMYA
Sbjct: 265 AFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYA 324
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG + R +F+ M D+ SW +I G A++G +A+ F++M G P+ + F+A
Sbjct: 325 KCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIA 384
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG 308
+L+ CSHAGL D F M D+GI+P+ EHYA + D+LGRAG+++EA E + NM
Sbjct: 385 LLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFK 444
Query: 309 PTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLR 368
PT ++W +LL++CR+H NV LA VA+++F ++PNN G YV+LSN YA A W+ +R
Sbjct: 445 PTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVR 504
Query: 369 VFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN--EALKELLERMEQEGYVPD 426
FM +GM K CSW+++K+K + FVAG S+ F + + + K L+E ME+ GYVPD
Sbjct: 505 EFMEKRGMTKEAGCSWLQIKSKIHTFVAGG-SNEFRNSVEYKKVWKRLMEAMEEVGYVPD 563
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T VLHDV EE + + HSERLA +F +I T G IRI KNLRVC DCH+ +K +SK
Sbjct: 564 TGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSK 623
Query: 487 IVQREIIVRDNSRFHHFEDGKCS 509
+ R I++RD +RFHHF+DG CS
Sbjct: 624 VTGRVIVLRDTNRFHHFKDGVCS 646
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 228/519 (43%), Gaps = 53/519 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LVSWN++I GL + EA+ R M + TL+++LP+ A + G
Sbjct: 238 MPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSG 297
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH ++ + + +SL++MYAKC ++ R+F + KD SWN++I G N
Sbjct: 298 KEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 357
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G E ++ F++M+ + P ++F +++ C+H G +L + + +G +
Sbjct: 358 GRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEH 417
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+D+ + G I+ A I M S W +++ LHGN A ++ +++ +
Sbjct: 418 YACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE-- 475
Query: 239 VKPNSVA-FVAVLTACSHAGL-----IDKAWSYFNSMTKDYG-----IAPSFEHYAAVAD 287
++PN+ +V + ++AG+ + + + MTK+ G I + A
Sbjct: 476 LEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVA--- 532
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGA 347
G + + + + E+ + VW L+ A V G V + M A
Sbjct: 533 --GGSNEFRNSVEY---------KKVWKRLMEAMEEVGYVPDTGVVLHDV----SEEMRA 577
Query: 348 YVILSNTYAAARRWK--DAASLRVFMRNKGMKKTPAC-SWIEVKNKAYAFVAGDKSHPFY 404
+ ++ A + + AS K ++ C SW++ +K V + +
Sbjct: 578 MWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRF 637
Query: 405 HRINEALKELLE-----RMEQEGYVPDT-------KEVLHDVEEEQKKNLLYYHSER--- 449
H + + ++ ++ QE DT K E+ L + +E
Sbjct: 638 HHFKDGVCSSIQISTVYKIFQENLDGDTVGNPFASKPAFACGIEQCVCFLPNFSNEGNVD 697
Query: 450 --LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
LA +F +I T G IRI KNL VC DCH+ +K +SK
Sbjct: 698 VWLATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSK 736
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 11/257 (4%)
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLF------CLLPVKDAISWNSIIAGCVQNGLF 123
H L N + LI +++ C RV+++ R+F LP W ++ G +NG
Sbjct: 102 HNLLNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNGYP 158
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L + +M+ + + +FS + AC+ L L G+ +H +++ D + + ++L
Sbjct: 159 KEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNAL 218
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
L +Y++ G A +FD M ++VSW ++I G +AI F M+ G+ +
Sbjct: 219 LRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSW 278
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V +L C+ + + K P ++ D+ + G + +
Sbjct: 279 VTLTTILPVCARVTALGSGKEIHAVIVKSTA-KPDAPVLNSLVDMYAKCGAMDYCRRVFN 337
Query: 304 NMHAGPTENVWLTLLSA 320
M G W TL++
Sbjct: 338 GMQ-GKDLTSWNTLITG 353
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/515 (38%), Positives = 312/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI-K 59
MP D+V+WN +I G A + ++AL + M + + T+ SVL D++ +
Sbjct: 513 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 572
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H Y + G +++ + +SLI MYAKC + S LF L ++ I+WN+++A
Sbjct: 573 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 632
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E LK +M + SFS + A A L L G+QLHG ++ GF+ + FI
Sbjct: 633 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 692
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++ DMY+KCG I + + SW +I HG + + F +M + G+
Sbjct: 693 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 752
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP V FV++LTACSH GL+DK +Y++ + +D+G+ P+ EH V DLLGR+G+L EA
Sbjct: 753 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 812
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FIS M P + VW +LL++C++H N++ K AE + ++P + YV+ SN +A
Sbjct: 813 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 872
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D ++R M K +KK ACSW+++K+K +F GD++HP I L+++ + ++
Sbjct: 873 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 932
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYV DT + L D +EEQK++ L+ HSERLA+ + ++ TP+G+T+RI KNLR+C DCH+
Sbjct: 933 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 992
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S+++ R I++RD RFHHFE G CSC DYW
Sbjct: 993 VYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
M D +SWN++ A+NG EE+ I M + + +S T+S++L + +VD K
Sbjct: 311 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG-HVDHQKW 369
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IHG ++ G D+ VC+ ++L+ MYA R +++ +F +P KD ISWNS++A V
Sbjct: 370 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 429
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L M+ + +V+F+S + AC G+ LHG ++ +G N I
Sbjct: 430 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 489
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ MY K G + +R + +M D+V+W A+I G A + A++ F+ M +GV
Sbjct: 490 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 549
Query: 240 KPNSVAFVAVLTAC 253
N + V+VL+AC
Sbjct: 550 SSNYITVVSVLSAC 563
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 144/257 (56%), Gaps = 16/257 (6%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +H ++ + +V ++LINMY K RV+ + LF ++PV++ +SWN++++G V+
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-HLGKQLHGCIIRNGFDDNMF 178
GL+ EG++FFR+M IKP +S++ AC ++ G Q+HG + ++G +++
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE------ 232
+++++L +Y G + +R +F++M ++VSWT++++G + G + I +++
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGR 270
Query: 233 ----QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
Q+ K G++ ++++ G +D A F+ M++ I+ + ++A
Sbjct: 271 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-----WNSIAAA 325
Query: 289 LGRAGKLQEAYEFISNM 305
+ G ++E++ S M
Sbjct: 326 YAQNGHIEESFRIFSLM 342
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 129/256 (50%), Gaps = 26/256 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MPV + VSWNT++ G+ R GLY E + R+M ++ +KP SF ++S++ + +
Sbjct: 133 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 192
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++HG+ + GL ++V + ++++++Y V S ++F +P ++ +SW S++ G
Sbjct: 193 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 252
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E + ++ LG+Q+ G ++++G + + +
Sbjct: 253 KGEPEEVIDIYKDE-------------------------SLGRQIIGQVVKSGLESKLAV 287
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ M GN+ A IFD+M D +SW ++ A +G+ ++ +F M +
Sbjct: 288 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 347
Query: 240 KPNSVAFVAVLTACSH 255
+ NS +L+ H
Sbjct: 348 EVNSTTVSTLLSVLGH 363
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 25/262 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++VG + G EE ++I Y D G
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGEPEEVIDI-------------------------YKDESLG 269
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I G ++ GL++ + + +SLI+M V+ ++ +F + +D ISWNSI A QN
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 329
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + F M + + S+++ H+ G+ +HG +++ GFD + +
Sbjct: 330 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 389
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYA G A +F +M D++SW +++ G + DA+ L M G
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
N V F + L AC +K
Sbjct: 450 VNYVTFTSALAACFTPDFFEKG 471
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ +T G+ +H ++ ++ ++L++MY K G ++ AR +FD M + + VSW
Sbjct: 83 SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ G G + + F +M G+KP+S +++TAC +G + + +
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 202
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
G+ A+ L G G + + + M P NV W +L+
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM---PDRNVVSWTSLM 247
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 312/515 (60%), Gaps = 6/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +N ++ GLAR AL + + L PD+ T S L A + + +
Sbjct: 64 IPHPSTNDFNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALALSET 119
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH + +R G A++ +G++LI+ YAKC ++ + R+F +P++D +WN++IAG Q
Sbjct: 120 SQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQG 179
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L F +M K +S + AC+ L L G+ +H C+ + D N+ +
Sbjct: 180 SKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVC 239
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++DMYAKCG +F M +V+W +IM A+HG+ A+ LFE+M K V
Sbjct: 240 NAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQV 299
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ +SV ++AVL AC+HAGL+++ F+ M G+ + +HY +V DLLGRAG+L EAY
Sbjct: 300 EMDSVTYLAVLCACNHAGLVEEGVRLFDEMV-GRGVNRNVKHYGSVVDLLGRAGRLGEAY 358
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I++M P +W +LL AC+ + NVE+A + K+ + N+ G +V+LSN YAA
Sbjct: 359 RIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARE 418
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D +R M+++ ++K P S+IEV+ + FV GD+SHP + I L E+ R++
Sbjct: 419 RWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIK 478
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYV +T VLHD+ EE K+N L +HSE+LA+ FG+I T +GT IR+ KNLR+CGDCH
Sbjct: 479 AFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHV 538
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK ISKI +EIIVRD +RFH F+DG CSC DYW
Sbjct: 539 VIKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/517 (40%), Positives = 310/517 (59%), Gaps = 10/517 (1%)
Query: 1 MPVS--DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP + ++ SWNT++ GL+R+G EA + M N S + ++++ FA D+
Sbjct: 108 MPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARN----SISWNAMVSCFAHAGDMC 163
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+E A N + +++++ Y VE + + F +PV+ +SWN+++AG V
Sbjct: 164 AAEECFEDAPD---KENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYV 220
Query: 119 QNGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+N ++ L F+ M+ A ++P + SS++ C++L+ L G+Q+H + +
Sbjct: 221 KNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRV 280
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+SL+ MY KCG++ A +F +M + D+++W A+I G A HG+ +AI LFE+M+
Sbjct: 281 TAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQ 340
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
GV+PN + FVAVLTAC H G+ D F M + YGI +HY+ + DLL RAG L+
Sbjct: 341 GVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLER 400
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A I +M P + + TLL+A RV+KN+E A A K+ +P N GAYV L+N YA
Sbjct: 401 AVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAV 460
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A +W D + +R +M++ + KTP SW+E+ + F + D+ HP I+E L +L ER
Sbjct: 461 ANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEER 520
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
M+ GYVPD LHDV+E K +L HSE+LAI FG++ T G T+RI KNLRVCGDC
Sbjct: 521 MKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDC 580
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
HTA K ISKI REII+RD +RFHHF G CSCGDYW
Sbjct: 581 HTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/552 (37%), Positives = 315/552 (57%), Gaps = 44/552 (7%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
L+ WNT+I N + + + ++ + L PD+FTL V+ A V +GK+IHG
Sbjct: 81 LIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHG 139
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHR---------------------------- 97
A++ G ++V + SL+NMY+KC ++ + +
Sbjct: 140 LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMI 199
Query: 98 --------------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHV 143
LF +P+ D ++WN +IAG NG F + +K F ML +P H
Sbjct: 200 NGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHA 259
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ S++ A + L L G+ +H + +NGF+ + + +SL++MYAKCG I A +F +
Sbjct: 260 TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAI 319
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ WTA+I+G +HG A+ A++LF +M K G+KPN++ F+ VL AC+HAGL+D
Sbjct: 320 QKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGR 379
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRV 323
YF+ M +Y I P+ EHY + D+L RAG L+EA I NM P + +W++LL R
Sbjct: 380 QYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRN 439
Query: 324 HKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACS 383
H +++ A+++ + P +G Y++LSN YAA+ W+ + +R M +G +K P CS
Sbjct: 440 HGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCS 499
Query: 384 WIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE-EEQKKNL 442
+E K + F+ GD SHP I + E+ E+++ G+VPDT +VL +E E++K+
Sbjct: 500 SVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAE 559
Query: 443 LYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHH 502
L HSERLAI FG+I G IRI+KNLRVC DCH+ K +SKI REIIVRDN RFHH
Sbjct: 560 LENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHH 619
Query: 503 FEDGKCSCGDYW 514
F++G CSC DYW
Sbjct: 620 FKNGSCSCMDYW 631
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ DLV+WN +I G NG + +A+ + M + +P TL SVL + + KG
Sbjct: 218 MPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKG 277
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH Y ++G + + +G+SLI MYAKC +E + +F + K W +II G +
Sbjct: 278 RWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIH 337
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + L F +M +KP + F ++ AC H + G+Q ++ + +
Sbjct: 338 GMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH 397
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHG 222
L+D+ + G++ A+ + M + + V W +++ G+ HG
Sbjct: 398 YGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 441
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 47/257 (18%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVED---SHRLFCLLPVKDAISWNSIIAGC 117
+++H ++++ + + + S L+ +Y+ ++ D + +F + + I WN+II
Sbjct: 33 EQLHAFSLKTAIFNHPFVSSRLLALYSD-PKINDLGYARSIFDRIQRRSLIHWNTIIKCY 91
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
V+N +G+ F + L+ + P + + ++ CA L + GKQ+HG ++ GF ++
Sbjct: 92 VENQFSHDGIVLFHE-LVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDV 150
Query: 178 FIASSLLDMYAKCGNIRLARCIFD------------------------------------ 201
F+ SL++MY+KCG I AR +FD
Sbjct: 151 FVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDS 210
Query: 202 ------KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+M + D+V+W +I G L+G DA+ +F M K G +P+ V+VL+A S
Sbjct: 211 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 270
Query: 256 AGLIDKAWSYFNSMTKD 272
++ K + M K+
Sbjct: 271 LAVLGKGRWIHSYMEKN 287
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLG------KQLHGCIIRNGFDDNMFIASSLLDMYA-- 188
K+ P H S +P HL+ +QLH ++ ++ F++S LL +Y+
Sbjct: 3 KLTPFH-SLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDP 61
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
K ++ AR IFD++ ++ W +I + +HD I LF ++ + + P++
Sbjct: 62 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPC 120
Query: 249 VLTACSHAGLIDKA 262
V+ C+ G++ +
Sbjct: 121 VIKGCARLGVVQEG 134
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/530 (40%), Positives = 315/530 (59%), Gaps = 16/530 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+VSWNT++ GL + G +AL + M + T S L + + V G
Sbjct: 482 LPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELG 541
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--------------- 105
+++HG ++ G + I SSL+ MY KC R++++ + +P+
Sbjct: 542 RQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELK 601
Query: 106 -DAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL 164
+SW +++G V NG +++GLK FR M+ + + ++I+ ACA+ L G+ +
Sbjct: 602 AGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHV 661
Query: 165 HGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA 224
H + G + ++ SSL+DMY+K G++ A IF + + +IV WT++I G ALHG
Sbjct: 662 HAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQG 721
Query: 225 HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAA 284
AI LFE+M G+ PN V F+ VL AC HAGL+++ YF M Y I P EH +
Sbjct: 722 KQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTS 781
Query: 285 VADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNN 344
+ DL GRAG L E FI +VW + LS+CR+HKNVE+ V+E + + P++
Sbjct: 782 MVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSD 841
Query: 345 MGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFY 404
GAYV+LSN A+ RW +AA +R M +G+KK P SWI++K++ + F+ GD+SHP
Sbjct: 842 PGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQD 901
Query: 405 HRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTT 464
I L L+ R+++ GY D K V+ DVEEEQ + L+ +HSE+LA+VFGII T + T
Sbjct: 902 EEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTP 961
Query: 465 IRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IRIIKNLR+C DCH IK+ S+++ REII+RD RFHHF+ G CSCGDYW
Sbjct: 962 IRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 175/375 (46%), Gaps = 57/375 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + +W +I G +R G E + R+M P+ +TLSS+ + +++ G
Sbjct: 350 IPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLG 409
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL------------------- 101
K +H + +R+G+DA+V +G+S++++Y KC E + R+F L
Sbjct: 410 KGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRA 469
Query: 102 ------------LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
LP KD +SWN+I+ G +Q G + L+ M+ + V+FS +
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIAL 529
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH--- 206
+ L+ + LG+QLHG +++ GF + FI SSL++MY KCG + A + + L
Sbjct: 530 ILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLK 589
Query: 207 -------------DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
IVSW ++ G +G D + F M ++ V + +++AC
Sbjct: 590 NGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649
Query: 254 SHAGLIDKAWSYFNSMTKDYG--IAPSFEHY--AAVADLLGRAGKLQEAYEFISNMHAGP 309
++AG+++ F Y I + Y +++ D+ ++G L +A+ + P
Sbjct: 650 ANAGILE-----FGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNE-P 703
Query: 310 TENVWLTLLSACRVH 324
W +++S C +H
Sbjct: 704 NIVFWTSMISGCALH 718
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H ++++G + + L+ +Y K + ++ + +LF +P ++ +W +I+G + G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ K FR+M P + SS+ C+ L LGK +H ++RNG D ++ + +S
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME-KDGVKP 241
+LD+Y KC A +F+ M+ D+VSW +I G+ ++ +F ++ KD V
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 242 NSV 244
N++
Sbjct: 491 NTI 493
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
LH ++NG + A+ LL +Y K N+ AR +FD++ + +WT +I G + G+
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ LF +M G PN ++ CS
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCS 401
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 309/541 (57%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L +N+ I G + + +++ + Q L PD+ T ++ + G + H
Sbjct: 77 NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAH 136
Query: 65 GYAIRHGLDANVCIGSSLINMYA-------------------------------KCARVE 93
G IRHG D++V + +SL+ MY+ K V
Sbjct: 137 GQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVT 196
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ +LF +P K+ ++W+ +I+G +N FD+ ++ + + + S++ +CA
Sbjct: 197 SARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCA 256
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
HL L LG++ H I+RN N+ + ++L+DMYA+CG+I A +FD++ D +SWT
Sbjct: 257 HLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTT 316
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A+HG A A+ F +MEK G+ P + F AVL+ACSH GL+++ F SM +DY
Sbjct: 317 LIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDY 376
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
I P EHY + DLLGRAGKL EA +F++ M P +W LL ACR+HKN E+A +
Sbjct: 377 RIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERA 436
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
+ + + P + G YV+LSN YA +W++ ++R M+ +G+ K P + E+ K +
Sbjct: 437 GKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHK 496
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GDK+HP +I +E+L ++ GY + + L D++EE+K++ ++ HSE+LAI
Sbjct: 497 FTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIA 556
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+ I+ T IRI+KNLRVC DCHTA K ISK+ +RE+IVRD +RFHHF+ G CSC DY
Sbjct: 557 YAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDY 616
Query: 514 W 514
W
Sbjct: 617 W 617
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 126/229 (55%), Gaps = 2/229 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV+W+ +I G A+N +++A+ + + + + + + SV+ A + G
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H Y +R+ + N+ +G++L++MYA+C ++ + +F LP +DA+SW ++IAG +
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G ++ L++F +M A + PR ++F++++ AC+H + G +L + R+ + +
Sbjct: 325 GYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEH 384
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
++D+ + G + A ++M + + W A++ +H N+ A
Sbjct: 385 YGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIA 433
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 43/306 (14%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH + IR +V S LI++ ++ + ++F + + +NS I G +
Sbjct: 32 KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGS 91
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D+ F+ Q + P ++++ ++ AC +L +G Q HG IIR+GFD ++++
Sbjct: 92 KDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQ 151
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM------ 234
+SL+ MY+ G+I+ A +F ++ D+VSWT+++ G G+ A LF++M
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211
Query: 235 -------------------------EKDGVKPNSVAFVAVLTACSHAG---LIDKAWSYF 266
+ +GV N V+V+ +C+H G L ++A Y
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI 271
Query: 267 --NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
N MT + + A+ D+ R G + +A ++ + G W TL++ +H
Sbjct: 272 LRNKMTVNLILG------TALVDMYARCGSIDKAI-WVFDQLPGRDALSWTTLIAGFAMH 324
Query: 325 KNVELA 330
E A
Sbjct: 325 GYAEKA 330
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/519 (39%), Positives = 315/519 (60%), Gaps = 5/519 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSWN VI N +++AL + M L+ + FTL S+L D+
Sbjct: 102 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLA 161
Query: 61 KEIHGYAIRHGLDAN-VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
++IH A G N +G+S++NMYA+C + D+ + F L K ++W+ ++A Q
Sbjct: 162 RQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQ 221
Query: 120 --NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDN 176
+G KFF++M IKP V+F S + ACA + TL G+ +H +GF + +
Sbjct: 222 SKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETS 281
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + +++++MY KCG+ A+ +FD+M ++SW ++I+ A +G+A +A+S ++M
Sbjct: 282 LVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLL 341
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G P+S V++L SHAGL+++ +F S +D+G+ PS + DLL R G L
Sbjct: 342 QGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLD 401
Query: 297 EAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
A E I A + + W+TLL+AC+ + + + + AE++F ++P + G++V+L+N Y
Sbjct: 402 AAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLY 461
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A+ RW DA+ +R M +KK P CSWIE+ + F++G+ HP I E L++L
Sbjct: 462 ASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLT 521
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
RM + GYVPDT V+HDVEE K+ +L HSERLAIVFG++ T G TIR++KNLRVC
Sbjct: 522 LRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCS 581
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A K IS +V REI+VRD+SRFHHF+ G+CSCGD+W
Sbjct: 582 DCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 620
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 34/302 (11%)
Query: 38 KPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR 97
+PD L A ++ G++IH + GL +N+ I +SL+NMY KC V + +
Sbjct: 7 RPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEK 66
Query: 98 LF----------------------C---------LLPVKDAISWNSIIAGCVQNGLFDEG 126
+F C +P KD +SWN++I V N F +
Sbjct: 67 VFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDA 126
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFIASSLLD 185
L+ F M + ++ + S++ AC L L L +Q+H GF N + +S+++
Sbjct: 127 LELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVN 186
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH--GNAHDAISLFEQMEKDGVKPNS 243
MYA+CG++ + FD ++ +V+W+ ++ A G+ A F++ME +G+KP
Sbjct: 187 MYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGE 246
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V FV+ L AC+ ++ S + S + ++ G+ G +A
Sbjct: 247 VTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFD 306
Query: 304 NM 305
M
Sbjct: 307 QM 308
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/554 (37%), Positives = 311/554 (56%), Gaps = 44/554 (7%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIK 59
P V + + I + GL+ AL ++ +M L P + TLS+ LP +
Sbjct: 83 PDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGC---LAV 139
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMY--------------------------------A 87
G+ +HGYA++ L + ++L+ MY A
Sbjct: 140 GRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYA 199
Query: 88 KCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSS 147
K +++D+ LF LP KD + WN+++ G Q+G E L+ FRQML + ++P VS
Sbjct: 200 KMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVL 259
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDD----NMFIASSLLDMYAKCGNIRLARCIFDKM 203
+ A A L T G+ LH + G N + ++L+DMY KCG++ A +F +
Sbjct: 260 ALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDL 319
Query: 204 DL---HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D+V+W A+I G A+HG + +A+ F Q+ G+ P + F+ VL ACSH+GL+D
Sbjct: 320 GGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVD 379
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ + F +M ++YGI P EHY + DLLGRAG+++EA++ + +M A P +W +LL A
Sbjct: 380 EGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGA 439
Query: 321 CRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTP 380
CR+HKN+ L +VA+ + N G YV+LSN YAAA +W++ +R MR G++K P
Sbjct: 440 CRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEP 499
Query: 381 ACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKK 440
CS +EV + FVAGD+SHP I L+E+ G+VP T+ VLHD+++ K+
Sbjct: 500 GCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKE 559
Query: 441 NLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRF 500
L HSE+LA+ FG+I TP T I+I+KNLR C DCH +K +S+ R+I+ RD +RF
Sbjct: 560 RALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRF 619
Query: 501 HHFEDGKCSCGDYW 514
HHF DG CSCGDYW
Sbjct: 620 HHFVDGSCSCGDYW 633
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 42/323 (13%)
Query: 41 SFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC 100
+ T + A + EIH A+R +D + + L YA R++ + L
Sbjct: 21 ALTADRAAALLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLR 80
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTL 158
P A+ + S I GL L +ML+++ + P + S+ +PAC L
Sbjct: 81 RTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACG---CL 137
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDM-------------------------------- 186
+G+ LHG ++ ++A++LL M
Sbjct: 138 AVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSC 197
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAK G + AR +FD + D+V W A++ G HG +A+ LF QM + GV+P+ V+
Sbjct: 198 YAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSV 257
Query: 247 VAVLTACSHAGLIDKA-W--SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V L+A + G + W S+ + + + + A+ D+ + G L+EA
Sbjct: 258 VLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFR 317
Query: 304 NMHAGPTENV--WLTLLSACRVH 324
++ G +V W +++ +H
Sbjct: 318 DLGGGGDRDVVAWNAMINGYAMH 340
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DLV WN ++ G ++G EAL + RQM ++PD ++ L A G
Sbjct: 214 LPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESG 273
Query: 61 KEIHGYAIRHGLDA----NVCIGSSLINMYAKCARVEDSHRLFCLLPV---KDAISWNSI 113
+ +H + G A N +G++L++MY KC +E++ +F L +D ++WN++
Sbjct: 274 RWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAM 333
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-G 172
I G +G E L+ F Q+ + P ++F ++ AC+H + G+ L + G
Sbjct: 334 INGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYG 393
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
+ ++D+ + G + A + M D W +++ LH N
Sbjct: 394 IVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKN 445
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 323/553 (58%), Gaps = 42/553 (7%)
Query: 1 MPVSDLVSWNTVI-----VGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
+P D+ +NT+I + + + L++VR G + P+ +T V + +
Sbjct: 75 IPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFL---PNRYTFVFVFKACGNGL 131
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN---- 111
V++G++I +AI+ GL++N+ + +++I MYA V+++ R+F +D SWN
Sbjct: 132 GVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIG 191
Query: 112 ---------------------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+IIAG VQ G F E L F +ML P +
Sbjct: 192 GYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFT 251
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF-DKM 203
+S + ACA+L L G+ +H I ++ N + +SLLDMYAKCG I A +F D+
Sbjct: 252 LASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEY 311
Query: 204 DLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
L + W A+I G A+HG + +AI LFEQM+ + V PN V FVA+L ACSH L+++
Sbjct: 312 GLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEG 371
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACR 322
YF SM YGI P EHY + DLLGR+G L+EA E + NM P +W LL ACR
Sbjct: 372 RGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACR 431
Query: 323 VHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPAC 382
+HK++E ++ + I +D +++G +V+L+N Y+A+ +W +A ++R + G KKTP C
Sbjct: 432 IHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGC 491
Query: 383 SWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDV-EEEQKKN 441
S IE+ + F+ GD+SHP ++ L E+ +++ GYVP+ EVL D+ +EE K+
Sbjct: 492 SSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKET 551
Query: 442 LLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFH 501
L HSE+LAI FG+I TP GT IRI+KNLRVC DCH A KFISK+ +REIIVRD R+H
Sbjct: 552 ALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYH 611
Query: 502 HFEDGKCSCGDYW 514
HF+DG CSC DYW
Sbjct: 612 HFKDGFCSCKDYW 624
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/542 (38%), Positives = 313/542 (57%), Gaps = 32/542 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D WN +I G + + E +L + ++M + +++T S+L ++ + +IH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G + +V +SLIN YA + +H LF +P D +SWNS+I G V+ G D
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 125 -------------------------------EGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
E L+ F +M + ++P +VS ++ + ACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L GK +H + + + + L+DMYAKCG + A +F + + +WTA
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A HG+ +AIS F +M+K G+KPN + F AVLTACS+ GL+++ F SM +DY
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ P+ EHY + DLLGRAG L EA FI M P +W LL ACR+HKN+EL ++
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
E + IDP + G YV +N +A ++W AA R M+ +G+ K P CS I ++ +
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHD-VEEEQKKNLLYYHSERLAI 452
F+AGD+SHP +I + + ++E+ GYVP+ +E+L D V++++++ +++ HSE+LAI
Sbjct: 499 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAI 558
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
+G+I T GT IRI+KNLRVC DCH K ISKI +R+I++RD +RFHHF DGKCSCGD
Sbjct: 559 TYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 618
Query: 513 YW 514
YW
Sbjct: 619 YW 620
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +SW T+I G + + +EAL + +M N +++PD+ +L++ L A + +G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y + + + +G LI+MYAKC +E++ +F + K +W ++I+G +
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F +M IKP ++F++++ AC++ + GK + + R+ +
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A+ +M L + V W A++ +H N
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/518 (38%), Positives = 313/518 (60%), Gaps = 11/518 (2%)
Query: 5 DLVSWNTVIVGLARN------GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
++V +N +I GL R+ + EAL++ ++ + ++P FT SSV+ D+
Sbjct: 282 NVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIE 341
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
GK+IHG ++H + IGS+LI++Y +ED R F +P +D ++W ++I+GCV
Sbjct: 342 FGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCV 401
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QN LF+ L F ++L A +KP + SS+M ACA L G+Q+ ++GF
Sbjct: 402 QNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTA 461
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +S + MYA+ G++ A F +M+ HDIVSW+AVI +A HG A DA+ F +M
Sbjct: 462 MGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAK 521
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V PN + F+ VLTACSH GL+D+ Y+ +M ++Y ++P+ +H V DLLGRAG+L +A
Sbjct: 522 VVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADA 581
Query: 299 YEFISN--MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
FI + H P +W +LL++CR+H+++E VA++I + P++ +YV L N Y
Sbjct: 582 EAFIRDSIFHDEPV--IWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYL 639
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A A+ +R M+ +G+KK P SWIE+++ ++FVAGDKSHP + I L E+L
Sbjct: 640 DAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLS 699
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++++ D D +++ + +HSE+LA+ G+I P IR++KNLRVC D
Sbjct: 700 KIDKL-TATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRD 758
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH +K ISK +REI++RD RFHHF DG CSC DYW
Sbjct: 759 CHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 172/332 (51%), Gaps = 15/332 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++ VS+N +I +R G E +L R + ++ D FT ++ L + + +
Sbjct: 73 MPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLRE 132
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H ++ G+ V + +SL++MYA+C + + ++F +D +SWN++++G V+
Sbjct: 133 GKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVR 192
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL--TTLHLGKQLHGCIIRNGFDDNM 177
G D+ L+ F M + I + S++ CA + + +HGC+++ GFD ++
Sbjct: 193 AGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV 252
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA------HDAISLF 231
F+AS+++ MYAK G + A +F + ++V + A+I G A +A+SL+
Sbjct: 253 FLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLY 312
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
+++ G++P F +V+ AC+ AG I+ + K F +A+ DL
Sbjct: 313 SEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG-SALIDLYLN 371
Query: 292 AGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+G +++ + +++ P ++V W ++S C
Sbjct: 372 SGCMEDGFRCFTSV---PKQDVVTWTAMISGC 400
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+V+W +I G +N L+E AL + ++ LKPD FT+SSV+ A G
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I +A + G +G+S I+MYA+ V + R F + D +SW+++I+ Q+
Sbjct: 445 EQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQH 504
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
G + L+FF +M+ AK+ P ++F ++ AC+H
Sbjct: 505 GCARDALRFFNEMVDAKVVPNEITFLGVLTACSH 538
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H + +R ++ + ++L+ Y C + RL +P +A+S+N +I + G
Sbjct: 36 VHAHIVRAHPSPSLFLRNTLLAAY--CRLGGHARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93
Query: 123 FDEGLKFF-RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ L+ F R A ++ ++++ + AC+ L GK +H + G +F+++
Sbjct: 94 PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+ MYA+CG++ AR +FD D D VSW A++ G G D + +F M + G+
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213
Query: 242 NSVAFVAVLTACS 254
NS A +V+ C+
Sbjct: 214 NSFALGSVIKCCA 226
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 315/510 (61%), Gaps = 7/510 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G + EEAL + +M ++PD+FT VL + V + +G +IH +
Sbjct: 99 YNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVF 158
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
GL+ +V + + LI+MY KC +E + +F + K SW+SII ++ E L
Sbjct: 159 NAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLM 218
Query: 129 FFRQMLIAKIKPRHVSFSSIM----PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
M + RH + SI+ AC HL + +LG+ +HG ++RN + N+ + +SL+
Sbjct: 219 LLGDM---SREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG++ C+F M + S+T +I G A+HG +A+ +F M ++G+ P+ V
Sbjct: 276 DMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDV 335
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+V VL+ACSHAGL+ + + FN M ++ I P+ +HY + DL+GRAG L+EAY+ I +
Sbjct: 336 VYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKS 395
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P + VW +LLSAC+VH N+E+ A+ IF ++ +N G Y++L+N YA A++W +
Sbjct: 396 MPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANV 455
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M K + +TP S +E Y FV+ DKS P I + ++++ +++ EGY
Sbjct: 456 ARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYT 515
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD +VL DV+E++K+ L +HS++LAI F +I T +G+ +RI +NLR+C DCHT KFI
Sbjct: 516 PDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFI 575
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S I +REI VRD++RFHHF+DG CSC DYW
Sbjct: 576 SVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 107/203 (52%), Gaps = 9/203 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K++H + ++ GL + GS+L+ A CA +E + +F + + +N++I
Sbjct: 48 KKVHAHILKLGLFYDSFCGSNLV---ASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIR 104
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V + +E L + +ML I+P + ++ ++ AC+ L L G Q+H + G +
Sbjct: 105 GNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEV 164
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F+ + L+ MY KCG I A +F++MD + SW+++I +A H+ + L M
Sbjct: 165 DVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMS 224
Query: 236 KDGV-KPNSVAFVAVLTACSHAG 257
++G + V+ L+AC+H G
Sbjct: 225 REGRHRAEESILVSALSACTHLG 247
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/512 (38%), Positives = 308/512 (60%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V+D+ S+N+V+ L +G EEA+ ++R+M + + D T V+ + A D+ G
Sbjct: 183 VNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLR 242
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H +R GL + +GS LI+MY KC V ++ +F L ++ + W +++ +QNG
Sbjct: 243 VHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGY 302
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
F+E L F M P +F+ ++ ACA + L G LH + + GF +++ + ++
Sbjct: 303 FEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNA 362
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++MY+K G+I + +F M DI++W A+I G + HG A+ +F+ M PN
Sbjct: 363 LINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPN 422
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V F+ VL+A SH GL+ + + Y N + +++ I P EHY + LL RAG L EA F+
Sbjct: 423 YVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFM 482
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
W TLL+AC VH+N +L ++AE + +DP+++G Y +LSN YA ARRW
Sbjct: 483 KTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWD 542
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
++R MR + +KK P SW++++N + F++ +HP +I + +++LL ++ G
Sbjct: 543 GVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLG 602
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YVP+ VLHDVE+EQK+ L YHSE+LA+ +G++ P IRIIKNLR+C DCHTA+K
Sbjct: 603 YVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVK 662
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ R IIVRD +RFHHF DG C+C D+W
Sbjct: 663 LISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 164/309 (53%), Gaps = 5/309 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
MP+ ++VSWN ++ G G + E L + + M ++ N P+ + ++ L + V +
Sbjct: 76 MPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKE 135
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP---VKDAISWNSIIAG 116
G + HG + GL + + S+L++MY++C+ VE + ++ +P V D S+NS++
Sbjct: 136 GMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNA 195
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
V++G +E ++ R+M+ + HV++ +M CA + L LG ++H ++R G +
Sbjct: 196 LVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFD 255
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
F+ S L+DMY KCG + AR +FD + ++V WTA++ +G ++++LF M++
Sbjct: 256 EFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDR 315
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+G PN F +L AC+ + ++ + G A+ ++ ++G +
Sbjct: 316 EGTLPNEYTFAVLLNACAGIAALRHG-DLLHARVEKLGFKNHVIVRNALINMYSKSGSID 374
Query: 297 EAYEFISNM 305
+Y ++M
Sbjct: 375 SSYNVFTDM 383
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKI 138
+SL+++Y KC ++ + LF +P+++ +SWN ++AG + G E L F+ M+ +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
P F++ + AC+H + G Q HG + + G + ++ S+L+ MY++C ++ LA
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 199 IFDKMD---LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+ D + ++DI S+ +V+ G +A+ + +M + V + V +V V+ C+
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 152 CAHLTTLHLGKQLHG-CIIRNGFDDNMFIA--SSLLDMYAKCGNIRLARCIFDKMDLHDI 208
CA + L GK +H +IRN ++ I+ +SL+ +Y KCG + LAR +FD M L ++
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 209 VSWTAVIMGNALHGNAH-DAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
VSW V+M LHG H + + LF+ M PN F L+ACSH G + +
Sbjct: 82 VSWN-VLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCH 140
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
+ K +G+ +A+ + R ++ A + + + P E+V
Sbjct: 141 GLLFK-FGLVCHQYVKSALVHMYSRCSHVELALQVLDTV---PGEHV 183
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/510 (39%), Positives = 298/510 (58%), Gaps = 32/510 (6%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
L+PD F L+S+ A + G+++H + + A+ + SSLI+MY KC ED+
Sbjct: 7 LRPDHFVLASLASAAARLRSLRLGRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDAR 66
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM----------------------- 133
++F + VK+ + W ++++G NG E + FR M
Sbjct: 67 KVFDSIGVKNGVVWTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTG 126
Query: 134 ---LIAKIKPRHVS------FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L +++ V ++++ A L L LG+QLHG I GF +M + ++L+
Sbjct: 127 AVGLFVEMRRDGVRIDDAFVLATVVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALV 186
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY+KC +I AR +F + + D+VSWT +++G A HG + ++L+++M G+KPN V
Sbjct: 187 DMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEV 246
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV ++ ACSHAGL+ K F+SM ++YGI P +HY DLL R+G L EA E I+
Sbjct: 247 TFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITT 306
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P E W LLSAC+ H + ++ +VA+ + + P + Y++LSN YA +W
Sbjct: 307 MPYEPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSV 366
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M ++K P SWIE ++ F AG+ I L+EL+ M + GYV
Sbjct: 367 AKVRKIMAEMEIRKEPGYSWIEAGRESRMFHAGEVPLDIGEEITRFLEELVSEMRKRGYV 426
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT V+HD+EE +K+ L+ HSERLA+ FGI+ +P G+ IR++KNLRVCGDCHT +KFI
Sbjct: 427 PDTSSVMHDLEENEKEQHLFLHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFI 486
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S+I QR+IIVRD SRFHHFEDG CSC ++W
Sbjct: 487 SEIAQRKIIVRDASRFHHFEDGNCSCSEFW 516
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 3/228 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIK 59
MP L +W +I G + G A+ + +M ++ D+F L++V+ A+ ++
Sbjct: 103 MPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLATVVGGAAELAALVL 162
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++HG+AI G +++ +G++L++MY+KC+ + + +F + V+D +SW +I+ G Q
Sbjct: 163 GRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQ 222
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G +E L + +ML+A +KP V+F ++ AC+H + G+QL + R G +
Sbjct: 223 HGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQ 282
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
+ LD+ ++ G + A + M D SW A++ H +
Sbjct: 283 HYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKHNDTQ 330
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 299/510 (58%), Gaps = 1/510 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
++ WNTV+ N +EEA I R M + D+ +L +V + KGK IH
Sbjct: 414 IMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHS 473
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
L + ++L+ MYA+ +ED+ +F + ++ ISW +++ Q GL E
Sbjct: 474 LLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNRE 533
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
L+ FR +L+ + P V+F++++ AC +L ++ K + C+ GF N+ +A+ LL
Sbjct: 534 ALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLC 593
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
KCG++ F M + + VSW I NA HGN + LF+ M+ +G+ SV
Sbjct: 594 TLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVT 653
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ VL++CSHAGL+ + +SYF +M DYG EHY+ V DLL RAG L+ A EF+ +
Sbjct: 654 LIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRL 713
Query: 306 HAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
G W+TLL C++H ++E G+ ++I ++P + G Y+++ N YA A +W +A
Sbjct: 714 PFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEA 773
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A++R M G KK P SWIEVK + + F GD SHP I+ L+ L E M++ G+V
Sbjct: 774 AAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFV 833
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D K V++D++ ++K++LL HSE+LAI FG+I T G +RI+KNLRVC DCH+A KFI
Sbjct: 834 CDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFI 893
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S +V REI+VRD RFHHF G CSC D+W
Sbjct: 894 SGLVGREIVVRDAYRFHHFRGGACSCEDFW 923
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D+ T ++++ A D+ +G+ IHG +R+G++ +G+ L+ MY KC E++ +F
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ K ++W S+I ++G E FR+M + + P V++ +++ AC H +
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158
Query: 160 -LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+ ++ C + ++ +A+++++ Y KCG++ A +FD + + D W A+I
Sbjct: 159 TIRARVEAC---GSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
H +A+ LF QM GV PN VA L AC H+ +A + G A +
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADT 275
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
A V ++ G+ GK+ +A E + + W +L+A + + A K ++
Sbjct: 276 VVQTALV-NMYGKFGKVDDAEEIFERIQERDVVS-WNAMLTANACNGFHDKAFKCFREML 333
Query: 339 MID--PNNMGAYVILSNTYAAA 358
++ P+ + IL+ + AA
Sbjct: 334 LVGELPSRITYVAILNACFLAA 355
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 130/251 (51%), Gaps = 8/251 (3%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD--YVDVIKGK-E 62
+V+W ++I AR+G +EA ++ R+M + P+ T +VL VD I+ + E
Sbjct: 106 VVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVE 165
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G L+ +V + ++++N Y KC ++ + +F + V+DA WN++I+ V +
Sbjct: 166 ACG-----SLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQ 220
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
DE L+ FRQM + + P + + + AC H ++H D + + ++
Sbjct: 221 GDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTA 280
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++MY K G + A IF+++ D+VSW A++ NA +G A F +M G P+
Sbjct: 281 LVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPS 340
Query: 243 SVAFVAVLTAC 253
+ +VA+L AC
Sbjct: 341 RITYVAILNAC 351
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D WN +I L + +EAL + RQM + P+ T + L D +
Sbjct: 202 VRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALR 261
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH +A DA+ + ++L+NMY K +V+D+ +F + +D +SWN+++ NG
Sbjct: 262 IHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGF 321
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPAC---AHLTTLHLGKQL---HGCIIRNGFDDN 176
D+ K FR+ML+ P +++ +I+ AC AHL K L GC I + +
Sbjct: 322 HDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIES---VD 378
Query: 177 MFIASSLLDMYAKCGNIRLA----RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
+ + +++++MY++C + + A + D I+ W V+ + +A ++F
Sbjct: 379 VVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFR 438
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
M GV ++V+ + V AC + ++K + +S+ + + A+ + R
Sbjct: 439 LMLLGGVTIDTVSLMTVFNACGSSASLEKG-KWIHSLLTESELTRKTPVQNALVTMYARL 497
Query: 293 GKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
G L++A E M T NV W ++ VH + L + A +IF
Sbjct: 498 GSLEDAREIFDAM---TTRNVISWTAMVG---VHSQLGL-NREALRIF 538
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 13/235 (5%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
+F++++ CA L L G+++HG I+RNG + F+ + LL MY KCG+ AR +F +
Sbjct: 42 TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+V+WT++I NA G+ +A LF +M+ GV PN V +VAVL AC H +D
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIR 161
Query: 264 SYF---NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ S+ D +A AV + G+ G L A+ + VW ++S
Sbjct: 162 ARVEACGSLELDVIVA------TAVMNAYGKCGDLDSAWGVFDGILVRDAA-VWNAMISL 214
Query: 321 CRVHKNVELAGKVAEKIFM--IDPNNMGAYVILSNTYAAARRWKDAASLRVFMRN 373
H+ + A ++ ++ + + PN G V N +R + +A + F R
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNK-GTCVAALNACCHSRDFSEALRIHAFARE 268
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 9/229 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW ++ ++ GL EAL I R + + P+ T ++VL + +
Sbjct: 510 MTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAA 569
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + G NV + + L+ KC +E+ F ++ VK+ +SWN+ IA Q+
Sbjct: 570 KLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQH 629
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ----LHGCIIRNGFDDN 176
G G++ F+ M + I V+ ++ +C+H + G +H + GF
Sbjct: 630 GNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH---VDYGFPAE 686
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGN 223
S ++D+ ++ G + A ++ D + W ++ G LHG+
Sbjct: 687 AEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGD 735
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 311/542 (57%), Gaps = 32/542 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+ ++ +N + EEAL + +M + D + S L + ++V G+ +H
Sbjct: 234 DMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVH 293
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHR--------------------------- 97
G A++ G++ V + ++LI++Y+ C + D+ R
Sbjct: 294 GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSI 353
Query: 98 -----LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
LF +P KD +SW+++I+G Q+ F E L F++M + ++P + S + AC
Sbjct: 354 QDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISAC 413
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
HL TL LGK +H I RN N+ ++++L+DMY KCG + A +F M+ + +W
Sbjct: 414 THLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWN 473
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
AVI+G A++G+ ++++F M+K G PN + F+ VL AC H GL++ YFNSM +
Sbjct: 474 AVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHE 533
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
+ I + +HY + DLLGRAG L+EA E I +M P W LL ACR H++ E+ +
Sbjct: 534 HKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGER 593
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
+ K+ + P++ G +V+LSN YA+ W + +R M G+ KTP CS IE +
Sbjct: 594 LGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVH 653
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F+AGDK+HP + I L + +++ EGYVP T EV D++EE+K+ L+ HSE+LA+
Sbjct: 654 EFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAV 713
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
FG+I T IR+ KNLR+C DCHT +K ISK R+I+VRD RFHHF+ G CSC D
Sbjct: 714 AFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMD 773
Query: 513 YW 514
+W
Sbjct: 774 FW 775
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 105/354 (29%)
Query: 8 SWNTVIVGLARNGLY-----EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+WNT++ R LY +AL + + KPDS+T +L A V +G++
Sbjct: 71 TWNTIM----RAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQ 126
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN----------- 111
+H +A+ G D +V + ++L+N+YA C V + R+F PV D +SWN
Sbjct: 127 LHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGE 186
Query: 112 --------------------SIIA-----GCV---------------------------- 118
S+IA GCV
Sbjct: 187 VEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYE 246
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QN + +E L F +M + + V S + AC+ + + +G+ +HG ++ G +D +
Sbjct: 247 QNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVS 306
Query: 179 IASSLLDMYAKCGNIRLARCIFD--------------------------------KMDLH 206
+ ++L+ +Y+ CG I AR IFD M
Sbjct: 307 LKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEK 366
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D+VSW+A+I G A H +A++LF++M+ GV+P+ A V+ ++AC+H +D
Sbjct: 367 DVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLD 420
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 2/217 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW+ +I G A++ + EAL + ++M ++PD L S + + G
Sbjct: 363 MPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLG 422
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y R+ L NV + ++LI+MY KC VE++ +F + K +WN++I G N
Sbjct: 423 KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMN 482
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFI 179
G ++ L F M P ++F ++ AC H+ ++ G+ +I + + N+
Sbjct: 483 GSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKH 542
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVI 215
++D+ + G ++ A + D M + D+ +W A++
Sbjct: 543 YGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALL 579
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 10/214 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH---RLFCLLPVKDAISWNSIIAG- 116
K++ I GL + S LIN + + H R+F L + +WN+I+
Sbjct: 20 KQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAH 79
Query: 117 -CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
+QN + L ++ L + KP ++ ++ CA + G+QLH + +GFD
Sbjct: 80 LYLQNSP-HQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDG 138
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++++ ++L+++YA CG++ AR +F++ + D+VSW ++ G G +A +FE M
Sbjct: 139 DVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMP 198
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+ N++A +++ G ++KA FN +
Sbjct: 199 ER----NTIASNSMIALFGRKGCVEKARRIFNGV 228
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 308/511 (60%), Gaps = 5/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++NT+I A + +L++ +M + PD FT VL A + G ++H
Sbjct: 52 DTFAFNTIIRAHA-DSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACAR---LQTGLDLH 107
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G D++V + + LI+ Y C ++ + + F +P +D +SW+S+IA +NG
Sbjct: 108 SLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGY 167
Query: 125 EGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
E L F++M L+ +KP V S++ A + L L LGK + G I RNG + + + ++L
Sbjct: 168 EALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTAL 227
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+DM+++CG I + +FD+M ++++WTA+I G A+HG + +A+ +F +M G +P+
Sbjct: 228 VDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDH 287
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V F VL ACSH GL+ + W F S+ +YG+ P EHY + DLLGRAG L EA +F+
Sbjct: 288 VTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVD 347
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M P +W TLL AC H +ELA KV EKI +D + G YV+LSN Y RW +
Sbjct: 348 GMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAE 407
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
A +R MR K + K P CS I V + + FVAGD +HP + I E L +++ ++ GY
Sbjct: 408 KAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGY 467
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
PD VL D+EEE+K++ L YHSE+LA+ F ++C D TIR++KNLR+C DCH +K+
Sbjct: 468 TPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKY 527
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + +REII+RD +RFHHF G CSC DYW
Sbjct: 528 ASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
MP DLVSW+++I A+NG EAL + ++M V +KPD + SV+ + D+
Sbjct: 145 MPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLEL 204
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK I G+ R+GL+ V +G++L++M+++C +E+S R+F + ++ ++W ++I G
Sbjct: 205 GKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAV 264
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+G E L+ F +M +P HV+F+ ++ AC+H
Sbjct: 265 HGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSH 299
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/518 (39%), Positives = 311/518 (60%), Gaps = 11/518 (2%)
Query: 5 DLVSWNTVIVGLARNG------LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
++V +N +I GL R+ + EAL++ ++ + ++P FT SSV+ D+
Sbjct: 282 NVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIE 341
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
GK+IHG ++H + IGS+LI++Y A +ED R F +P +D ++W ++I+GCV
Sbjct: 342 FGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCV 401
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QN LF+ L F ++L +KP + SS+M ACA L + G+Q+ ++GFD
Sbjct: 402 QNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTA 461
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +S + MYA+ GN+ A F +M+ HD+VSW+A+I +A HG A A+ F +M
Sbjct: 462 MGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAK 521
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V PN + F+ VLTACSH GL+D+ Y+ M +YG+ P+ +H V DLLGRAG+L +A
Sbjct: 522 VVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADA 581
Query: 299 YEFISN--MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
FI + H P VW +LL +CR+H+++E VA++I + P + G YV L N Y
Sbjct: 582 EAFIRDSIFHDEPV--VWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYL 639
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A + +R M+ +G+KK P SWIE+++ ++FVAGDKSHP + I L E+L
Sbjct: 640 DAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLS 699
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++++ DT + +++N + HSE+LA+ GII P IR++KNLRVC D
Sbjct: 700 KIDKL-TTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRD 758
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+ +K ISK REII+RD RFHHF DG CSCGDYW
Sbjct: 759 CHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 173/332 (52%), Gaps = 15/332 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP + VS+N +I +R G EE+L + +K D FT ++ L + + +
Sbjct: 73 MPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKE 132
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H A+ GL V + +SL++MYA+C + ++ R+F + +D +SWNS+++G ++
Sbjct: 133 GKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLR 192
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA--HLTTLHLGKQLHGCIIRNGFDDNM 177
G +E L+ F M + + S++ C+ + + + +HGC+++ G D ++
Sbjct: 193 VGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL 252
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG-----NALHGN-AHDAISLF 231
F+AS+++DMYAK G + A +F + ++V + A+I G A+H +A+SL+
Sbjct: 253 FLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLY 312
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
+++ G++P F +V+ AC+ AG I+ + K F +A+ DL
Sbjct: 313 SELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG-SALIDLYFN 371
Query: 292 AGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+ +++ + ++ P ++V W ++S C
Sbjct: 372 SACMEDGFRCFRSV---PKQDVVTWTAMISGC 400
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 118/223 (52%), Gaps = 2/223 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+V+W +I G +N L+E AL + ++ V LKPD FT+SSV+ A V G
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTG 444
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++ +A + G D +G+S I+MYA+ VE + + F + D +SW++II+ Q+
Sbjct: 445 EQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQH 504
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G + L+FF +M+ AK+ P ++F ++ AC+H + G + + + + G +
Sbjct: 505 GCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKH 564
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHD-IVSWTAVIMGNALH 221
+ ++D+ + G + A HD V W +++ +H
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIH 607
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH---RLFCLLPVKDAISWNSIIA 115
+ +HG+ R ++ + ++L+ Y + D+H RL +P ++A+S+N +I
Sbjct: 28 QAAAVHGHIARAHPSPSLFLRNTLLAAYCRLG-AGDTHQARRLLDEMPRRNAVSFNLLID 86
Query: 116 GCVQNGLFDEGLK-FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+ G +E L+ F A++K ++++ + AC+ L GK +H + G
Sbjct: 87 AYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLA 146
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ +F+++SL+ MYA+CG++ AR +FD + D VSW +++ G G + + +F M
Sbjct: 147 EGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALM 206
Query: 235 EKDGVKPNSVAFVAVLTACSHA-GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
+ + NS A +V+ CS G + + G+ +A+ D+ + G
Sbjct: 207 RRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRG 266
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSA-CR----VHKNV 327
L EA ++ P V+ +++ CR VHK V
Sbjct: 267 ALSEAVALFKSV-LDPNVVVFNAMIAGLCRDEAAVHKEV 304
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 308/508 (60%), Gaps = 1/508 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
+NT++ G ++ EEAL ++M +KPD+FT ++L A V +G ++H +
Sbjct: 98 QFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHI 157
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GL+ +V + +SLI+MY KC + +F + + SW+++I G++ + L
Sbjct: 158 LKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCL 217
Query: 128 KFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
+ M + S++ AC HL L LG+ +HG ++RN N+ + +SL++M
Sbjct: 218 RLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEM 277
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG++ C+F KM + +S++ +I G A+HG + + +F +M + G++P+ + +
Sbjct: 278 YLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVY 337
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL ACSHAGL+ + FN M ++GI P+ +HY + DL+GRAGK+ EA E I +M
Sbjct: 338 VGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMP 397
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P + +W +LLSA +VH N++ A+++F +D YV+LSN YA A+RW+D A
Sbjct: 398 MEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAK 457
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
R M +KG+ + P S +EVK K + FV+ D HP + E L ++ +++ EGY PD
Sbjct: 458 TRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPD 517
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T +VL DV+EE+KK L HS++LAI + +I T G+ IRI++NLR+C DCHT K IS
Sbjct: 518 TTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISI 577
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I REI VRD RFHHF+DG CSC DYW
Sbjct: 578 IFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 112/206 (54%), Gaps = 9/206 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K+ H ++ GL + S+L+ A CA ++ + +F + + +N+++
Sbjct: 48 KQSHARILKLGLFGDSFCASNLV---ATCALSDWGSMDYACSIFRQMDELGSFQFNTMMR 104
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V++ +E L +++M +KP + ++ +++ ACA L + G Q+H I++ G ++
Sbjct: 105 GHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEN 164
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F+ +SL+ MY KCG I + +F++M+ + SW+A+I +A G D + L M
Sbjct: 165 DVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMS 224
Query: 236 KDGV-KPNSVAFVAVLTACSHAGLID 260
+G + V+VL+AC+H G +D
Sbjct: 225 NEGYWRAEESILVSVLSACTHLGALD 250
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
M + SW+ +I A G++ + L ++ M N + + L SVL +
Sbjct: 192 MNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDL 251
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +HG+ +R+ NV + +SLI MY KC + LF + K+ +S++ +I+G
Sbjct: 252 GRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAM 311
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMF 178
+G EGL+ F +ML ++P + + ++ AC+H + G Q + + +G + +
Sbjct: 312 HGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQ 371
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G I A + M + + V W +++ + +H N
Sbjct: 372 HYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNN 417
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-----GNIRLARCIFD 201
S++ C+++ KQ H I++ G + F AS+L+ A C G++ A IF
Sbjct: 36 SLLKKCSNMEEF---KQSHARILKLGLFGDSFCASNLV---ATCALSDWGSMDYACSIFR 89
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+MD + ++ G+ N +A+ +++M + GVKP++ + +L AC+ +++
Sbjct: 90 QMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEE 149
Query: 262 A 262
Sbjct: 150 G 150
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +S++ +I GLA +G E L I +M L+PD VL + V +G
Sbjct: 294 MAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEG 353
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII-AGC 117
+ + + HG++ + ++++ + +++++ L +P++ + + W S++ A
Sbjct: 354 LQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASK 413
Query: 118 VQNGL 122
V N L
Sbjct: 414 VHNNL 418
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 311/520 (59%), Gaps = 7/520 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNG------LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY 54
+P +++ +N +I G R+ + EAL++ +M + ++P FT SS+L
Sbjct: 267 VPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLA 326
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII 114
+ GK+IHG ++H + IGS+LI++Y+ +ED +R F LP +D ++W S+I
Sbjct: 327 GEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMI 386
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+GCVQN LF++ L+ F++ + +KP + SS+M ACA L G+Q+ I+ GF+
Sbjct: 387 SGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFN 446
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ +S + M A+ G++ F +M+ D+VSW+AVI +A HG A DA+ +F +M
Sbjct: 447 RFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEM 506
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
V PN V F+ VLTACSH GL+D Y+ M +YG++P+ +H V DLLGRAG+
Sbjct: 507 MNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGR 566
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
L +A FI + VW +LL++CR+H ++E VA++I ++P + +YVIL N
Sbjct: 567 LADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNM 626
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y A A+ R M+ +G+KK P SWIE+++ ++FVAGDKSHP + I + L E+
Sbjct: 627 YLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEM 686
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
L ++E+ D D ++NL+ HSE++A+ FG+I P IR++KNLRVC
Sbjct: 687 LSKIEKLANT-DNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVC 745
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH+ +K IS REII+RD RFHHF G CSCGDYW
Sbjct: 746 RDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 174/336 (51%), Gaps = 23/336 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP + VS+N +I +R GL AL R L+ D FT ++ L + +D+
Sbjct: 62 MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRT 121
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H + GL V + +SL +MYA C + ++ R+F D +SWNS+++G V+
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVR 181
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL--HLGKQLHGCIIRNGFDDNM 177
G +E LK F M + + SI+ CA + + H+ + +HGC+++ G D ++
Sbjct: 182 AGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL 241
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG----NALHGN--AHDAISLF 231
F+AS+++DMYAK G + A +F + +++ + A+I G A G + +A+SL+
Sbjct: 242 FLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLY 301
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF--EHY--AAVAD 287
+M+ G++P+ F ++L AC+ AG F + SF + Y +A+ D
Sbjct: 302 SEMQSRGMQPSEFTFSSILRACNLAGEFG-----FGKQIHGQVLKHSFHDDDYIGSALID 356
Query: 288 LLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
L +G +++ Y ++ P +++ W +++S C
Sbjct: 357 LYSDSGCMEDGYRCFRSL---PKQDIVTWTSMISGC 389
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH--RLFCLLPVKDAISWNSIIAGCVQN 120
+H + R A++ + +SL+ Y + H RL +P ++A+S+N +I+ +
Sbjct: 21 VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRA 80
Query: 121 GLFDEGLK-FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL L+ F R A ++ ++++ + AC+ L GK +H + +G + +F+
Sbjct: 81 GLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFL 140
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++SL MYA CG + AR +FD + HD VSW +++ G G + + +F M G+
Sbjct: 141 SNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGL 200
Query: 240 KPNSVAFVAVLTACS 254
NS A +++ C+
Sbjct: 201 GWNSFALGSIIKCCA 215
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/517 (39%), Positives = 318/517 (61%), Gaps = 7/517 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSWN+++V ++ +AL + +M L D FTL+SVL F + D++ G + H
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFH 263
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAG-CVQNGL 122
I+ G N +GS LI++Y+KC + D ++F + D + WN++I+G + L
Sbjct: 264 AKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDL 323
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-MFIAS 181
DE L+ FRQ+ +P S ++ AC+++++ G+Q+HG ++ N + + +
Sbjct: 324 SDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNN 383
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+ MY+KCGN+R A+ +FD M H+ VS+ ++I G A HG ++ LF++M + P
Sbjct: 384 ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTP 443
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
++ F++VL AC+H G ++ YFN M + +GI P H++ + DLLGRAGKL EA
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I + P W LL ACR+H NVELA K A ++ +DP N YV+L+N Y+ R
Sbjct: 504 IETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRL 563
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DAAS+R MR++G+KK P CSWIEV + + FVA D HP +I E L+E++ ++++
Sbjct: 564 QDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKV 623
Query: 422 GYVPDTKEVL----HDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
GY P+ + V + +++ L +HSE+LA+ FG++ T +G I + KNLR+C DC
Sbjct: 624 GYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDC 683
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H AIK+IS++V+REI VRD+ RFH F+DG+CSCG YW
Sbjct: 684 HNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 145/258 (56%), Gaps = 5/258 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+NT+I AR G + A + +M L D FTLS ++ V +I+
Sbjct: 100 MPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIR- 158
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
++H ++ GLD+ V +G++LI Y+K ++++ R+F L +D +SWNS++ +Q
Sbjct: 159 -QLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + L+ + +M + + + +S++ A ++ L G Q H +I++G+ N +
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV 277
Query: 180 ASSLLDMYAKCGNIRL-ARCIFDKMDLHDIVSWTAVIMGNALHGNAHD-AISLFEQMEKD 237
S L+D+Y+KCG L R +FD++ D+V W +I G +L+ + D A+ F Q++
Sbjct: 278 GSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGV 337
Query: 238 GVKPNSVAFVAVLTACSH 255
G +P+ + V V++ACS+
Sbjct: 338 GHRPDDCSLVCVISACSN 355
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
H D NV ++LI+ YAK + VE +H+LF +P D++S+N++IA + G +
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F +M A + + S I+ AC + L +QLH + G D + + ++L+ Y+K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSK 185
Query: 190 CGNIRLARCIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
G ++ AR IF + + D VSW ++++ H A+ L+ +M G+ + +
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245
Query: 249 VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG----KLQEAYEFISN 304
VLTA ++ + + + K G + + + DL + G ++ ++ ISN
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304
Query: 305 MHAGPTENVWLTLLSACRVHKNV 327
P +W T++S +++++
Sbjct: 305 ----PDLVLWNTMISGYSLYEDL 323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
SF + C L GK LH I++ + ++++ L +Y+KC + AR +FD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
++ S+ +I A A LF++M +P+SV++ ++ A + G A+
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAF 125
Query: 264 SYFNSMTKDY 273
F M + +
Sbjct: 126 QLFLEMREAF 135
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N++I G A++G+ ++L++ ++M ++ P + T SVL A V G
Sbjct: 405 MPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDG 464
Query: 61 K-EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSIIAGCV 118
K + + G++ S +I++ + ++ ++ RL +P W++++ C
Sbjct: 465 KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACR 524
Query: 119 QNGLFDEGLKFFRQML 134
+G + +K ++L
Sbjct: 525 IHGNVELAIKAANRLL 540
>gi|357135729|ref|XP_003569461.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Brachypodium distachyon]
Length = 595
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 301/510 (59%), Gaps = 5/510 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK----EIH 64
W+++I A+NGL A + R+M + ++ S A D ++ +H
Sbjct: 87 WSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPSAAKAVAAAADSLRPPLAPHALH 146
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G A + +V +GS++++MYAKC + D+ RLF +P ++ +SW+++I G G+
Sbjct: 147 GLASKTPFAEDVFVGSAVLDMYAKCGNLLDARRLFDEMPERNVVSWSALIGGYADAGMHP 206
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR L ++ + S I+ CA T LG Q+H I+ D + F+ SSL+
Sbjct: 207 AALWIFRSALEEAVEVNDFTVSCIVRVCATATLFDLGAQVHARSIKTALDASPFVGSSLV 266
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y+KCG + A IF ++ W AV+ +A HG+ A F +M+ DG +PN +
Sbjct: 267 SLYSKCGLVDRAYRIFSAAPERNLGIWNAVLNASAQHGHTATAFERFMEMQNDGFRPNYI 326
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ +LTACSHAGL+D+ YF S+ K+Y I P EHYAA+ DLLGR G++ EA E I +
Sbjct: 327 TFLCLLTACSHAGLVDEGKRYF-SLMKEYTIEPQAEHYAAMVDLLGRVGRITEALELIES 385
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P E+VW LL ACR+ K+ + A A+++F + GA+++LS+TYAAA R DA
Sbjct: 386 MPMEPPESVWGALLMACRMFKDADTAAIAAKRLFQTGSRSSGAHMLLSSTYAAAGRHVDA 445
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A R MR+ G++K SW+E + + FV+ + HP I L+++ E+ME GYV
Sbjct: 446 ALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSDEIYNVLEKVGEKMEGAGYV 505
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
DT V+ DV E+K L YHSERLAI G++ P+G IR++KNLRVC DCH AIK++
Sbjct: 506 ADTSAVVKDVAREEKCETLGYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNAIKYL 565
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK R +I+RDN RFH FEDG CSCGD+W
Sbjct: 566 SKCTGRVVILRDNRRFHRFEDGLCSCGDFW 595
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 16/300 (5%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHG-----LDANVCIGSSLINMYAKCARVEDSHR 97
+L+ +L + + + KG+++HG+ ++ G ++ + L+ YA+CA E R
Sbjct: 14 SLAELLVVLSAARALPKGQQLHGFLLKGGHLPAIASSHALLSHHLLTFYARCALPELCLR 73
Query: 98 LFC-LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA--- 153
F L A +W+S+I+ QNGL FR+ML A + S S A A
Sbjct: 74 AFLDLPAPPPAAAWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPSAAKAVAAAA 133
Query: 154 -HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
L LHG + F +++F+ S++LDMYAKCGN+ AR +FD+M ++VSW+
Sbjct: 134 DSLRPPLAPHALHGLASKTPFAEDVFVGSAVLDMYAKCGNLLDARRLFDEMPERNVVSWS 193
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G A G A+ +F ++ V+ N ++ C+ A L D K
Sbjct: 194 ALIGGYADAGMHPAALWIFRSALEEAVEVNDFTVSCIVRVCATATLFDLGAQVHARSIKT 253
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSACRVHKNVELA 330
A F + V+ L + G + AY S A P N +W +L+A H + A
Sbjct: 254 ALDASPFVGSSLVS-LYSKCGLVDRAYRIFS---AAPERNLGIWNAVLNASAQHGHTATA 309
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 158/336 (47%), Gaps = 13/336 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G A G++ AL I R ++ + FT+S ++ + A G
Sbjct: 184 MPERNVVSWSALIGGYADAGMHPAALWIFRSALEEAVEVNDFTVSCIVRVCATATLFDLG 243
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +I+ LDA+ +GSSL+++Y+KC V+ ++R+F P ++ WN+++ Q+
Sbjct: 244 AQVHARSIKTALDASPFVGSSLVSLYSKCGLVDRAYRIFSAAPERNLGIWNAVLNASAQH 303
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + F +M +P +++F ++ AC+H + GK+ + +
Sbjct: 304 GHTATAFERFMEMQNDGFRPNYITFLCLLTACSHAGLVDEGKRYFSLMKEYTIEPQAEHY 363
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++D+ + G I A + + M + S W A++M + +A A +++ + G
Sbjct: 364 AAMVDLLGRVGRITEALELIESMPMEPPESVWGALLMACRMFKDADTAAIAAKRLFQTGS 423
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + + T + +D A + +D G+ L AG E +
Sbjct: 424 RSSGAHMLLSSTYAAAGRHVDAALA--RKAMRDAGV-----RKETGLSWLEAAG---EVH 473
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
F+SN P + +L +V + +E AG VA+
Sbjct: 474 TFVSNCRRHPRSDEIYNVLE--KVGEKMEGAGYVAD 507
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/480 (42%), Positives = 299/480 (62%), Gaps = 1/480 (0%)
Query: 36 NLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDS 95
N+ P ++T +SV+ AD + G+ +HG+ + HG +V + ++L+ +Y KC + ++
Sbjct: 106 NVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINA 165
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
++F + + ++WNS+I+G QNG E + F +M ++P +F S++ ACAHL
Sbjct: 166 RKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHL 225
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
LG +H I+ NG D N+ + +SL++MY +CGN+ AR +FD M ++V+WTA+I
Sbjct: 226 GAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMI 285
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
G +G A+ LF +M ++G+ PNS+ FVAVL+AC+HAGL+++ F S+ ++Y +
Sbjct: 286 SGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHL 345
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFI-SNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
P EH + D+LGRAG L EAY FI + P + +L AC++HKN +L +VA
Sbjct: 346 VPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVA 405
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
E + +P N YVILSN YA A R +R M K +KK S +EV K Y F
Sbjct: 406 EHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLF 465
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
GDKSH + I L EL+ + + GYVP + V+H++EEE+++ L YHSE+LAI F
Sbjct: 466 SMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAF 525
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
G++ T GT IRI+KNLR+C DCH+AIKFIS I REIIVRD RFHHF+ G CSC DYW
Sbjct: 526 GLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H + I G + + + L+N+ + + ++F +P D+ + S+I ++
Sbjct: 30 QVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSH 89
Query: 122 LFD-EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F L F+ +M+++ + P + +F+S++ +CA L+ L G+ +HG ++ +GF ++++
Sbjct: 90 NFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQ 149
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ +Y KCG++ AR +FDK+ IV+W ++I G +G A +AI LF++M++ GV+
Sbjct: 150 AALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVE 209
Query: 241 PNSVAFVAVLTACSHAG 257
P+S FV+VL+AC+H G
Sbjct: 210 PDSATFVSVLSACAHLG 226
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+V+WN++I G +NG +EA+ + +M ++PDS T SVL A G +H
Sbjct: 176 SIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVH 235
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y + +GLD NV +G+SLINMY +C V + +F + ++ ++W ++I+G NG
Sbjct: 236 EYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-----IRNGFDDNMFI 179
+ ++ F +M + P ++F +++ ACAH ++ G++L I + G + N+
Sbjct: 296 QAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNV-- 353
Query: 180 ASSLLDMYAKCG 191
L+DM + G
Sbjct: 354 --CLVDMLGRAG 363
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++V+W +I G NG +A+ + +M L P+S T +VL A V +G
Sbjct: 273 MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEG 332
Query: 61 KEIHG-----YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN---- 111
+ + Y + G++ NVC L++M + +++++ +K+ I N
Sbjct: 333 RRLFASIREEYHLVPGVEHNVC----LVDMLGRAGLLDEAYNF-----IKEEIPENPAPA 383
Query: 112 ---SIIAGCVQNGLFDEGLKFFRQMLIAKIK-PRH 142
+++ C + FD G + +L A+ + P H
Sbjct: 384 ILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAH 418
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P +++ ++ A L LH Q+H II +G+ + + + LL++ G+I R I
Sbjct: 10 PHSPAYNFLLQAGPRLYLLH---QVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQI 66
Query: 200 FDKMDLHDIVSWTAVIMGNA-LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
F + D +T++I + H + ++ + +M V P++ F +V+ +C+
Sbjct: 67 FLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCA 122
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/516 (38%), Positives = 305/516 (59%), Gaps = 11/516 (2%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE--- 62
+V++N I AR GLY AL + R+M L+ D +TL +L A ++G
Sbjct: 9 VVAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAAQ----LRGPPEAV 64
Query: 63 --IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR--LFCLLPVKDAISWNSIIAGCV 118
+H +R GL ++ + ++L++ YA+ + +F +P +D ++W S++ G
Sbjct: 65 AALHALLLRAGLAPHLHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLA 124
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ G ++ + M+ + ++P + + + +CA T L LG+ +H +R G
Sbjct: 125 RAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRS 184
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+ MYAK G +R AR +FD M ++WTA+I+G A +G ++ ++ M + G
Sbjct: 185 VENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSG 244
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ V F+ +L ACSHAGL+D ++F SM YGIAP +HYA + DLLGRAG+L EA
Sbjct: 245 CRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEA 304
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+ ++ VW +LL ACRVH+N ELA + AE ++ +DP + YV+LSN Y+ A
Sbjct: 305 MDLLNRSSTELDATVWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRA 364
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RRW D A +R M+ +G+ K P CSW+ V + F D+ HP I ++E+ ER+
Sbjct: 365 RRWGDVARIRALMKARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVEEMTERI 424
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
EGYVPDT L D E ++ L YHSERLA+ FG++ P IR+ KNLRVCGDCH
Sbjct: 425 RVEGYVPDTDWALQDEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCH 484
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
TAIK ++K+ REII+RD + FHH +DG+CSCGDYW
Sbjct: 485 TAIKMVAKVYGREIILRDANCFHHMKDGECSCGDYW 520
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 111/226 (49%), Gaps = 2/226 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+W +++ GLAR G + A+ M ++PD F + + L A + G
Sbjct: 108 MPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLG 167
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H A+R GL + +SL++MYAK + D+ +F +P + I+W ++I G QN
Sbjct: 168 RSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQN 227
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFI 179
G + L+ + M+ + +P +V+F ++ AC+H + G+ + G
Sbjct: 228 GRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDH 287
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
+ ++D+ + G + A + ++ D W +++ +H NA
Sbjct: 288 YACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLLGACRVHQNA 333
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/515 (38%), Positives = 311/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI-K 59
MP D+V+WN +I G A N ++AL + + + + T+ SVL D++ +
Sbjct: 524 MPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLER 583
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H Y + G +++ + +SLI MYAKC + S LF L + I+WN+I+A
Sbjct: 584 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAH 643
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E LK +M + SFS + A A L L G+QLHG ++ GF+ + FI
Sbjct: 644 HGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFI 703
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++ DMY+KCG I + + SW +I HG + F +M + G+
Sbjct: 704 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGI 763
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP V FV++LTACSH GL+D+ +Y++ + KD+G+ P+ EH V DLLGR+G+L EA
Sbjct: 764 KPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAE 823
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FIS M P + VW +LL++C++H++++ K AE + ++P + +V+ SN +A
Sbjct: 824 TFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTG 883
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D ++R M K +KK ACSW+++K+K +F GD++HP I L+++ + ++
Sbjct: 884 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 943
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYV DT + L D +EEQK++ L+ HSERLA+ + ++ TP+G+T+RI KNLR+C DCH+
Sbjct: 944 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 1003
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S+++ R I++RD RFHHFE G CSC DYW
Sbjct: 1004 VYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 139/249 (55%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D +SWN+++ A+NG EE+ I M + + +S T+S++L + D G+ IH
Sbjct: 326 DTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIH 385
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G D+ VC+ ++L+ MYA R E++ +F +P KD ISWNS++A V +G
Sbjct: 386 GLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSL 445
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L M+ +V+F+S + AC G+ LHG ++ +G DN I ++L+
Sbjct: 446 DALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALV 505
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY K G + +R + +M D+V+W A+I G A + + A++ F+ + +GV N +
Sbjct: 506 SMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYI 565
Query: 245 AFVAVLTAC 253
V+VL+AC
Sbjct: 566 TVVSVLSAC 574
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 140/252 (55%), Gaps = 1/252 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MPV + VSWNT++ G+ R GLY E + ++M ++ +KP SF ++S++ + +
Sbjct: 119 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFRE 178
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G ++HG+ + GL ++V + ++++++Y V S ++F +P ++ +SW S++ G
Sbjct: 179 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 238
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +E + ++ M ++ S S ++ +C L LG+Q+ G +I++G + + +
Sbjct: 239 KGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAV 298
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ M+ GN+ A IF+++ D +SW +++ A +G+ ++ +F M +
Sbjct: 299 ENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHD 358
Query: 240 KPNSVAFVAVLT 251
+ NS +L+
Sbjct: 359 EVNSTTVSTLLS 370
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++VG + G EE ++I + M ++ + ++S V+ D G
Sbjct: 221 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLG 280
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I G I+ GL++ + + +SLI+M+ V+ ++ +F + +D ISWNSI+A QN
Sbjct: 281 RQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQN 340
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + F M + + S+++ + G+ +HG +++ GFD + +
Sbjct: 341 GHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVC 400
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL MYA G A +F +M D++SW +++ G + DA+ + M + G
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKS 460
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
N V F + L AC DK
Sbjct: 461 VNYVTFTSALAACFSPEFFDKG 482
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 123/204 (60%), Gaps = 1/204 (0%)
Query: 51 FADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISW 110
F+ G+ +H ++ + +V ++LINMY K RV+ + LF +PV++ +SW
Sbjct: 68 FSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSW 127
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-HLGKQLHGCII 169
N++++G V+ GL+ EG++FF++M IKP +S++ AC ++ G Q+HG +
Sbjct: 128 NTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVA 187
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
++G ++++++++L +Y G + +R +F++M ++VSWT++++G + G + I
Sbjct: 188 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVID 247
Query: 230 LFEQMEKDGVKPNSVAFVAVLTAC 253
+++ M +GV+ N + V+++C
Sbjct: 248 IYKSMRGEGVECNENSMSLVISSC 271
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ +T G+ LH ++ ++ ++L++MY K G ++ AR +FDKM + + VSW
Sbjct: 69 SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
++ G G + + F++M G+KP+S +++TAC +G + + +
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
G+ A+ L G G + + + M P NV W +L+
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM---PDRNVVSWTSLM 233
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/511 (39%), Positives = 311/511 (60%), Gaps = 10/511 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N+++ G A N ++ + + +M + ++ + T+ ++ ++ G +HG+
Sbjct: 79 VCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGF 138
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ GLD + +G+ L+ MY K ++ +LF +P K I+WN++I G QNGL +
Sbjct: 139 CVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNV 198
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ +++M P ++ ++ +CAHL L +GK++ + GF N F+ ++L++M
Sbjct: 199 LELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNM 258
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN++ AR IFD M + +VSWTA+I G +HG A+ LF++M + G+KP+ AF
Sbjct: 259 YARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAF 318
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V+VL+ACSHAGL +K YF M + YG+ P EHY+ + DLLGRAG+L EA E I +M
Sbjct: 319 VSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQ 378
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
+W LL AC++H+NVELA E++ ++P N G YV+LSN Y A +
Sbjct: 379 VRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILR 438
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R+ MR + +KK P CS++E K + + F AGD++HP + I + L EL E V D
Sbjct: 439 VRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNEL------ENLVKD 492
Query: 427 ---TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
K+ H+ EE N + HSE+LA+ F ++ T T I IIKNLR+CGDCH IK
Sbjct: 493 LDGCKKNDHERREEY-LNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKL 551
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKIV R+ +VRD +RFHHF++G CSC +YW
Sbjct: 552 VSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 183/394 (46%), Gaps = 36/394 (9%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P++FT + A I GK++H + + G + +SLI+MY KC+ ++++ +L
Sbjct: 8 PNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKL 67
Query: 99 FCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
F P K + +NS+++G N + + F +M ++ V+ ++ C
Sbjct: 68 FDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPG 127
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L LG +HG ++ G D + + + LL MY K G I R +FD+M +++W A+I
Sbjct: 128 NLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMIN 187
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
G A +G A++ + L+++ME G P+ + V VL++C+H G + M + +G +
Sbjct: 188 GYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM-EGFGFS 246
Query: 277 PSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVA 334
+ A+ ++ R G L++A + M P ++V W ++ +H E+A +
Sbjct: 247 SNPFLNNALVNMYARCGNLKKARDIFDGM---PVKSVVSWTAIIGGYGMHGQGEVAVGLF 303
Query: 335 EKIFM--IDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
+++ I P+ +LS A + NKG+ + V + Y
Sbjct: 304 DEMIRGGIKPDGTAFVSVLSACSHAG------------LTNKGL------DYFGVMERKY 345
Query: 393 AFVAGDKSHPFY-------HRINEALKELLERME 419
G + + R+NEA +EL+E M+
Sbjct: 346 GLRPGAEHYSCMVDLLGRAGRLNEA-RELIESMQ 378
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L++WN +I G A+NGL L + ++M + PD TL VL A + G
Sbjct: 174 MPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVG 233
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+ G +N + ++L+NMYA+C ++ + +F +PVK +SW +II G +
Sbjct: 234 KEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMH 293
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G + + F +M+ IKP +F S++ AC+H + G G + R G
Sbjct: 294 GQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEH 353
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S ++D+ + G + AR + + M + D W A++ +H N A FEQ+ +
Sbjct: 354 YSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIE-- 411
Query: 239 VKPNSVAFVAVLT 251
++P + + +L+
Sbjct: 412 LEPTNTGYYVLLS 424
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML + P +F + +CA L+ GKQLH + + G F+ +SL+ MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 193 IRLARCIFDK--MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
I AR +FD+ V + +++ G AL+ D + LF +M + GV+ N V + ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 251 TACSHAG 257
C G
Sbjct: 121 QPCGIPG 127
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 316/550 (57%), Gaps = 36/550 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MP + + WN I+ ++ ++ + + R+M LK ++ T+ VL + +
Sbjct: 584 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNM 643
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKE HGY +R+G D +V +G+SLI+MY K + + +F + ++ +WNS+++G
Sbjct: 644 GKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSF 703
Query: 120 NGLFD-----------------------------------EGLKFFRQMLIAKIKPRHVS 144
G+F+ E L FF QM + P S
Sbjct: 704 KGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSAS 763
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ ++ ACA L+ L GK++H IRNGF +++F+A++L+DMY+K +++ A +F ++
Sbjct: 764 ITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ 823
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ SW +IMG A+ G +AIS+F +M+K GV P+++ F A+L+AC ++GLI + W
Sbjct: 824 NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWK 883
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
YF+SM DY I P EHY + DLLGRAG L EA++ I M P +W LL +CR+H
Sbjct: 884 YFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 943
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
KN++ A A+ +F ++PNN Y+++ N Y+ RW+D LR M G++ SW
Sbjct: 944 KNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSW 1003
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
I++ + + F + +K HP +I L +L+ M++ GYVPD V +++E +K+ +L
Sbjct: 1004 IQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILL 1063
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
H+E+LAI +G+I G IR+IKN R+C DCH+A K+IS + RE+ +RD RFHHF
Sbjct: 1064 SHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFR 1123
Query: 505 DGKCSCGDYW 514
+GKCSC D+W
Sbjct: 1124 EGKCSCNDFW 1133
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 153/276 (55%), Gaps = 3/276 (1%)
Query: 5 DLVSWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+ + WN+ + + G L + +++ + DS S L +D+ G EI
Sbjct: 486 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 545
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG I+ G D +V + +L+N Y +C +E ++++F +P +A+ WN I +Q+
Sbjct: 546 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL 605
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+G++ FR+M + +K + ++ A + L L++GK+ HG ++RNGFD ++++ +S
Sbjct: 606 QKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTS 665
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMY K ++ A+ +FD M +I +W +++ G + G DA+ L QMEK+G+KP+
Sbjct: 666 LIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 725
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
V + +++ + G +A ++F M ++ G+ P+
Sbjct: 726 LVTWNGMISGYAMWGCGKEALAFFAQMQQE-GVMPN 760
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 102 LPVKDAISWNSIIAGCVQN-GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL 160
LP ++ + WNS + + G L+ F+++ + +S + C + + L
Sbjct: 483 LP-RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWL 541
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
G ++HGC+I+ GFD ++++ +L++ Y +C + A +F +M + + W I+ N
Sbjct: 542 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 601
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC-SHAGLID 260
+ LF +M+ +K + V VL A S G ++
Sbjct: 602 SEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLN 642
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 322/525 (61%), Gaps = 19/525 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-----GNVNLKP----DSFTLSSVLPIF 51
+P +VSW ++I G +N +A+ + +++ G+V + DS L V+ F
Sbjct: 39 IPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGCVVSAF 98
Query: 52 AD--YVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS 109
+ + V +G +HG I+ G + V +G++L++ YAK + + ++F + D
Sbjct: 99 SKLGWRGVTEG--VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNESDHYF 155
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
WNS+IA QNGL E F M +K + +++++ L LGK +H +I
Sbjct: 156 WNSVIAEYAQNGLSAEAFSVFGDM----VKSGNFRYNAVIMDXGLSGALQLGKCIHHQVI 211
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
+ +D++F+ +S++D+Y KC + +AR FD M + ++ SWTA++ G +HG A +A+
Sbjct: 212 KMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAME 271
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
+F +M + GVKPN + FV+VL ACSHAG++ + +FN M ++ + P EHY + DLL
Sbjct: 272 IFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCMVDLL 331
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYV 349
GRAG L Y I M+A P +W +LL ACR+HKNVEL A K+F +D +N G YV
Sbjct: 332 GRAGYLX-CYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCGYYV 390
Query: 350 ILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINE 409
+LSN YA A RW + +R+ M+++G+ K P S +E+K + + + GDK HP + +I E
Sbjct: 391 LLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHEKIYE 450
Query: 410 ALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIK 469
L + ++++ GY+P+ VLHDV+EE+K +L HSE+LA+ FGI+ + G+ I IIK
Sbjct: 451 YLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSIIHIIK 510
Query: 470 NLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
NLR+CGDC+ IK I K+V REI+VRD+ RFHHF++G CSCGDYW
Sbjct: 511 NLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH----VSFSSIM 149
DS LF +P + +SW SIIAGCVQN + ++ F+++L+ + V S++
Sbjct: 31 DSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVL 90
Query: 150 PACAHLTTLHLG-----KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
C LG + +HG +I+ GF+ + + ++L+D YAK G + +A+ +FD M+
Sbjct: 91 LGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK-VFDGMN 149
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
D W +VI A +G + +A S+F M K G
Sbjct: 150 ESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG 183
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/516 (39%), Positives = 309/516 (59%), Gaps = 11/516 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I G +N + ++I R++ V + + + +++L + + + +
Sbjct: 279 MPRRNVVSWTTMITGYVQN----QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEA 334
Query: 61 KEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
E+ + I+ +V +++I + + V + ++F + KD +W+++I +
Sbjct: 335 SELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL + L+ FR M I+P S S++ CA L L G+++H ++R+ FD ++++
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS LL MY KCGN+ A+ +FD+ + D+V W ++I G A HG +A+ +F M G+
Sbjct: 450 ASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGI 509
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V FV VL+ACS+ G + K FNSM Y + EHYA + DLLGRAGKL EA
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I M +W LL ACR H ++LA A+K+ +++P N G +++LSN YA+
Sbjct: 570 DLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQG 629
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS-HPFYHRINEALKELLERM 418
RW D A LR MR++ + K P CSWI V+ K + F GD S HP + IN L+ L +
Sbjct: 630 RWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLL 689
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GY PD VLHDV+EE+K L YHSE+LA+ +G++ P G IR++KNLRVCGDCH
Sbjct: 690 REAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCH 749
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK I+K+ REII+RD +RFHHF+DG CSC DYW
Sbjct: 750 AAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SWN+++ G +N +EA N+ +M N + + + ++ + + + +
Sbjct: 124 MRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERN----TISWNGLVSGYINNGMINEA 179
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ + NV ++++ Y K + ++ LF +P K+ +SW ++ G +Q
Sbjct: 180 REVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE 235
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE + F +MP + ++
Sbjct: 236 GRIDEACRLF----------------DMMP-----------------------EKDVVTR 256
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++ Y + G + AR +FD+M ++VSWT +I G + A LFE M +
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----E 312
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V++ A+L ++ G +D+A FN+M +A + A+ G+ G++ +A +
Sbjct: 313 KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACN-----AMILCFGQNGEVPKARQ 367
Query: 301 FISNMHAGPTENVWLTLL 318
M E W ++
Sbjct: 368 VFDQMRE-KDEGTWSAMI 384
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 64/294 (21%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+SLI Y++ ++E + +F + K+ ISWNSI+AG QN E F +M
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM------ 155
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
+ N + L+ Y G I AR +
Sbjct: 156 ---------------------------------SERNTISWNGLVSGYINNGMINEAREV 182
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
FD+M ++VSWTA++ G G +A +LF QM + N V++ +L G I
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRI 238
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMHAGPTENV--W 314
D+A F+ M + + +++G + G+L EA M P NV W
Sbjct: 239 DEACRLFDMMPE--------KDVVTRTNMIGGYCQVGRLVEARMLFDEM---PRRNVVSW 287
Query: 315 LTLLSACRVHKNVELAGKVAEKIFMIDPN-NMGAYVILSNTYAAARRWKDAASL 367
T+++ ++ V+ +A K+F + P N ++ + Y R +A+ L
Sbjct: 288 TTMITGYVQNQQVD----IARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL 337
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 168 IIRNGFDDNMFIAS--SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
++ N F + FI S SL+ Y++ G I AR +FD+M +I+SW +++ G +
Sbjct: 87 LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A ++F++M + N++++ +++ + G+I++A F+ M + ++ + A+
Sbjct: 147 EAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAM 197
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLT----LLSACRVHKNVELAGKVAEKIFM 339
+ G + EA M P +NV W LL R+ + L + EK +
Sbjct: 198 VRGYVKEGMISEAETLFWQM---PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVV 254
Query: 340 IDPNNMGAY 348
N +G Y
Sbjct: 255 TRTNMIGGY 263
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/523 (41%), Positives = 311/523 (59%), Gaps = 37/523 (7%)
Query: 26 LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINM 85
L++VR G + P+ +T V + + V++G++I +AI+ GL++N+ + +++I M
Sbjct: 20 LSMVRVSGFL---PNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRM 76
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWN-------------------------------SII 114
YA V+++ R+F +D SWN +II
Sbjct: 77 YANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTII 136
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
AG VQ G F E L F +ML P + +S + ACA+L L G+ +H I ++
Sbjct: 137 AGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIK 196
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIF-DKMDLH-DIVSWTAVIMGNALHGNAHDAISLFE 232
N + +SLLDMYAKCG I A +F D+ L + W A+I G A+HG + +AI LFE
Sbjct: 197 MNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFE 256
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
QM+ + V PN V FVA+L ACSH L+++ YF SM YGI P EHY + DLLGR+
Sbjct: 257 QMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRS 316
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G L+EA E + NM P +W LL ACR+HK++E ++ + I +D +++G +V+L+
Sbjct: 317 GLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLA 376
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N Y+A+ +W +A ++R + G KKTP CS IE+ + F+ GD+SHP ++ L
Sbjct: 377 NLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLD 436
Query: 413 ELLERMEQEGYVPDTKEVLHDV-EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
E+ +++ GYVP+ EVL D+ +EE K+ L HSE+LAI FG+I TP GT IRI+KNL
Sbjct: 437 EMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNL 496
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVC DCH A KFISK+ +REIIVRD R+HHF+DG CSC DYW
Sbjct: 497 RVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW T+I G + G ++EAL++ +M P+ FTL+S L A+ V + +G
Sbjct: 124 MSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG 183
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGC 117
+ IH Y + + N + +SL++MYAKC ++ + ++F L +K WN++I G
Sbjct: 184 RWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGY 242
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDN 176
+G E + F QM + K+ P V+F +++ AC+H + G+ + + G +
Sbjct: 243 AMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPE 302
Query: 177 MFIASSLLDMYAKCGNIRLA-RCIFDKMDLHDIVSWTAVIMGNALH 221
+ ++D+ + G ++ A +F+ D W A++ +H
Sbjct: 303 IEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIH 348
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 31/165 (18%)
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F + ++ P +F + AC + + G+Q+ I+ G + N+F+ ++++ MYA
Sbjct: 19 FLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYA 78
Query: 189 K-------------------------------CGNIRLARCIFDKMDLHDIVSWTAVIMG 217
G I A+ +FD+M D+VSWT +I G
Sbjct: 79 NWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAG 138
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G +A+ LF +M + G PN + L AC++ +D+
Sbjct: 139 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG 183
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 313/515 (60%), Gaps = 11/515 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYE-EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +D++SW +I G ++G+ E + + + +M N ++KP+ T SS+L A D
Sbjct: 318 MPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDS 377
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H + I+ + +G++L++MYA+ +E++ R+F L + I C+
Sbjct: 378 GRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP-------CIT 430
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G +++ + +F+S++ A A + L G+QLH ++ GF + F+
Sbjct: 431 EG---RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFV 487
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++SL+ MY++CG + A F+++ +++SWT++I G A HG A A+SLF M GV
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN V ++AVL+ACSH GL+ + YF SM +D+G+ P EHYA + DLL R+G ++EA
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEAL 607
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI+ M VW TLL ACR H N+E+ A+ + ++P + YV+LSN YA A
Sbjct: 608 EFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAG 667
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W + A +R MR+ + K SW+EV+N + F AGD SHP I L L+ +++
Sbjct: 668 LWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIK 727
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT VLHD+ +E K+ L HSE++A+ FG+I T IRI KNLRVC DCH+
Sbjct: 728 GMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHS 787
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK++SK +REII+RD++RFH +DG+CSCG+YW
Sbjct: 788 AIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 137/258 (53%), Gaps = 6/258 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTL-SSVLPIFADYVDVIKGK 61
+ D+VSW + LARNG +L ++ +M L P+++TL ++ F + + G
Sbjct: 113 LRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGG 172
Query: 62 EIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ G + GL +V +GS+LI+M A+ + + ++F L K + W +I+ VQ
Sbjct: 173 VVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQG 232
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E ++ F L +P + SS++ AC L ++ LG QLH +R G + ++
Sbjct: 233 ECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVS 292
Query: 181 SSLLDMYAKCG---NIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEK 236
L+DMYAK + A +F++M +D++SWTA+I G G + ++LF +M
Sbjct: 293 CGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLN 352
Query: 237 DGVKPNSVAFVAVLTACS 254
+ +KPN + + ++L +C+
Sbjct: 353 ESIKPNHITYSSILKSCA 370
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 56 DVIKGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSI 113
D+ G+ +H +R L D + + +SL+ +Y++C V + +F + ++D +SW ++
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNG 172
+ +NG L +ML + + P + + AC H +G + G + + G
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 173 F-DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
++ + S+L+DM A+ G++ AR +FD + +V WT +I A +A+ LF
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+DG +P+ ++++AC+ G +
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSV 270
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/516 (39%), Positives = 309/516 (59%), Gaps = 11/516 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW T+I G +N + ++I R++ V + + + +++L + + + +
Sbjct: 279 MPRRNVVSWTTMITGYVQN----QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEA 334
Query: 61 KEI-HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
E+ + I+ +V +++I + + V + ++F + KD +W+++I +
Sbjct: 335 SELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
GL + L+ FR M I+P S S++ CA L L G+++H ++R+ FD ++++
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS LL MY KCGN+ A+ +FD+ + D+V W ++I G A HG +A+ +F M G+
Sbjct: 450 ASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGI 509
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ V FV VL+ACS+ G + K FNSM Y + EHYA + DLLGRAGKL EA
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I M +W LL ACR H ++LA A+K+ +++P N G +++LSN YA+
Sbjct: 570 DLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQG 629
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKS-HPFYHRINEALKELLERM 418
RW D A LR MR++ + K P CSWI V+ K + F GD S HP + IN L+ L +
Sbjct: 630 RWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLL 689
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GY PD VLHDV+EE+K L YHSE+LA+ +G++ P G IR++KNLRVCGDCH
Sbjct: 690 REAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCH 749
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK I+K+ REII+RD +RFHHF+DG CSC DYW
Sbjct: 750 AAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SWN+++ G +N +EA N+ +M N + + + ++ + + + +
Sbjct: 124 MRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERN----TISWNGLVSGYINNGMINEA 179
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ + NV ++++ Y K + ++ LF +P K+ +SW ++ G +Q
Sbjct: 180 REVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE 235
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G DE + F +MP + ++
Sbjct: 236 GRIDEACRLF----------------DMMP-----------------------EKDVVTR 256
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++++ Y + G + AR +FD+M ++VSWT +I G + A LFE M +
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----E 312
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
N V++ A+L ++ G +D+A FN+M +A + A+ G+ G++ +A +
Sbjct: 313 KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACN-----AMILCFGQNGEVPKARQ 367
Query: 301 FISNMHAGPTENVWLTLL 318
M E W ++
Sbjct: 368 VFDQMRE-KDEGTWSAMI 384
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 64/294 (21%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+SLI Y++ ++E + +F + K+ ISWNSI+AG QN E F +M
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM------ 155
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
+ N + L+ Y G I AR +
Sbjct: 156 ---------------------------------SERNTISWNGLVSGYINNGMINEAREV 182
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
FD+M ++VSWTA++ G G +A +LF QM + N V++ +L G I
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRI 238
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMHAGPTENV--W 314
D+A F+ M + + +++G + G+L EA M P NV W
Sbjct: 239 DEACRLFDMMPE--------KDVVTRTNMIGGYCQVGRLVEARMLFDEM---PRRNVVSW 287
Query: 315 LTLLSACRVHKNVELAGKVAEKIFMIDPN-NMGAYVILSNTYAAARRWKDAASL 367
T+++ ++ V+ +A K+F + P N ++ + Y R +A+ L
Sbjct: 288 TTMITGYVQNQQVD----IARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL 337
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 168 IIRNGFDDNMFIAS--SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
++ N F + FI S SL+ Y++ G I AR +FD+M +I+SW +++ G +
Sbjct: 87 LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A ++F++M + N++++ +++ + G+I++A F+ M + ++ + A+
Sbjct: 147 EAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAM 197
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLT----LLSACRVHKNVELAGKVAEKIFM 339
+ G + EA M P +NV W LL R+ + L + EK +
Sbjct: 198 VRGYVKEGMISEAETLFWQM---PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVV 254
Query: 340 IDPNNMGAY 348
N +G Y
Sbjct: 255 TRTNMIGGY 263
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/455 (44%), Positives = 280/455 (61%), Gaps = 16/455 (3%)
Query: 76 VCIGSSLINMYAKCA----RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
+C + L+NM +C+ + LF + + WN++I G V N FD+ ++F+
Sbjct: 42 LCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYG 101
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG---------CIIRNGFDDNMFIASS 182
M P + +F ++ ACA L L LG ++H CI+ G N+F+ +S
Sbjct: 102 LMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTS 161
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD---GV 239
L+DMYAKCGN+ AR +FD M DIVSW A+I G AL+G +AI LF QM+++ G+
Sbjct: 162 LVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGI 221
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ F+ +L C+HAGL+D+ YFNSM + + + PS EHY + DLLGRAG L EA+
Sbjct: 222 KPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAH 281
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I NM VW LL ACR+H++ +LA +++ ++P N G YV+LSN Y+A
Sbjct: 282 QLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANL 341
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W +AA +R+ M K ++K P CSWIEV + F+ GDK HP +I L EL ++M+
Sbjct: 342 KWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMK 401
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVP T VL D+EEE+K++ L HSE+LAI FG+I IR++KNLRVCGDCH
Sbjct: 402 VAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHM 461
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK IS I REI VRDN+RFH F +G CSC DYW
Sbjct: 462 AIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 14/240 (5%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+I GL N +++A+ M + P++FT VL A +D+ G +IH +
Sbjct: 80 WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139
Query: 69 RH---------GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ G+ NV +G+SL++MYAKC +E + +F +P KD +SW ++I G
Sbjct: 140 KEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYAL 199
Query: 120 NGLFDEGLKFFRQMLIAK---IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDD 175
NGL E + F QM IKP +F ++ C H + G++ + R
Sbjct: 200 NGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTP 259
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM 234
++ ++D+ + G + A + M + + + W A++ +H + A +Q+
Sbjct: 260 SIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQL 319
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN---LKPDSFTLSSVLPIFADYVDV 57
MP D+VSW +I G A NGL +EA+++ QM N +KPD T +L V
Sbjct: 182 MPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLV 241
Query: 58 IKGKEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIA 115
+G+ R L ++ ++++ + ++++H+L +P++ +AI W +++
Sbjct: 242 DEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 301
Query: 116 GC 117
C
Sbjct: 302 AC 303
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/517 (39%), Positives = 314/517 (60%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP DLV+WN++I G A G + ++ +M V +P+ T S++ +
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G IHG ++ G+ V + ++L+N+Y K + S +LF L VK+ +SWN++I +
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNGL +EGL +F +KP +F +++ C + + L + +HG I+ GF+ N
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTC 180
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I ++LLD+YAK G + + +F ++ D ++WTA++ A HG DAI FE M G
Sbjct: 181 ITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYG 240
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V F +L ACSH+GL+++ YF +M+K Y I P +HY+ + DL+GR+G LQ+A
Sbjct: 241 LSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDA 300
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y I M P+ VW LL ACRV+K+ +L K A+++F ++P + Y++LSN Y+A+
Sbjct: 301 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSAS 360
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
WKDA+ +R M+ KG+ + S+IE NK + FV GD SHP +I + LKE+ ++M
Sbjct: 361 GLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 420
Query: 419 EQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ E G+ T+ VLHDV+E+ K+ ++ HSE++A+ FG++ I I KNLR+CGDC
Sbjct: 421 KSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDC 480
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H K IS I +R II+RD+ RFHHF +G CSC DYW
Sbjct: 481 HETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 517
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 313/515 (60%), Gaps = 5/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D +++NT+I +R +L+ M + + D+FT VL + +
Sbjct: 48 IPSPDTIAYNTIIRSHSR-FFPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSR---LQIN 103
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +++GL +++ + ++LI +Y C +E + ++F + +D++SW+++IA + N
Sbjct: 104 LHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNN 163
Query: 121 GLFDEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E L F +M L K+ P V+ S++ A +HL L LG+ + I R GF ++ +
Sbjct: 164 GYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVAL 223
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DM+++CG+I + +F+KM + ++++WTA+I G +HG + +A+++F M K GV
Sbjct: 224 GTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGV 283
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V F VL ACSH GL+ + W F S+ K YG+ P +HY + D+LGRAG L EAY
Sbjct: 284 QPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAY 343
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+F+ M P +W TLL AC H N+ LA KV KI I + G V+LSN Y AA
Sbjct: 344 DFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAG 403
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + AS+R MR K + K P CS I V + FV+GD SHP I + L ++ +
Sbjct: 404 RWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLR 463
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY+ TK VLHD+EEE++++ L YHSE+LA+ F I+ D TIRI+KNLR+C DCH+
Sbjct: 464 NRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHS 523
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K IS +R+II+RD +RFHHFE G CSC DYW
Sbjct: 524 FMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 324/549 (59%), Gaps = 43/549 (7%)
Query: 8 SWNTVIVGLAR---------NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
SWNT+I LA N L E L + + ++P+ FT VL A +
Sbjct: 82 SWNTIIRALADSDDDDLFHVNSL-EALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIE 140
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------- 96
+GK++HG+ ++ GL ++ + S+L+ +Y C ++D+H
Sbjct: 141 EGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGY 200
Query: 97 ----------RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
LF +P K +SWN +I+GC QNG F E ++ F M + + P +V+
Sbjct: 201 VRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLV 260
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM-DL 205
S++PA + L + LGK +H +N + + + S+L+DMY+KCG+I A +F+ + +
Sbjct: 261 SVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNK 320
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ ++W+A+I G A+HG A DA+ F +M++ GV P+ V ++ VL+ACSHAGL+++ S
Sbjct: 321 KNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSI 380
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+ M G+ P EHY + DLLGRAG L+EA + I NM P + + LL AC++H
Sbjct: 381 YYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHG 440
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N+E+ ++A+ + P++ G+YV LSN +A+ W+ +R+ M+ ++K P CSWI
Sbjct: 441 NIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWI 500
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
E+ + F+ D SHP I+ L+E+ +R+ GY P+T +VL +++E++K++ L+Y
Sbjct: 501 ELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHY 560
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE++AI FG+I T T ++I+KNLRVC DCH++IK +SKI R+IIVRD RFHHFE+
Sbjct: 561 HSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFEN 620
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 621 GSCSCMDYW 629
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 120/226 (53%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSWN +I G A+NG ++EA+ + M ++ P+ TL SVLP + + G
Sbjct: 216 MPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELG 275
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQ 119
K +H +A ++ ++ + +GS+LI+MY+KC ++ + ++F + K+ I+W++II G
Sbjct: 276 KWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAM 335
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMF 178
+G + L F +M A + P V + ++ AC+H + G+ ++ ++ G +
Sbjct: 336 HGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIE 395
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A + M + D V A++ +HGN
Sbjct: 396 HYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGN 441
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 45/307 (14%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNSII---A 115
K+IH + I+ G + + L+ + ++ + + F + + SWN+II A
Sbjct: 32 KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALA 91
Query: 116 GCVQNGLFD----EGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
+ LF E L +F ML ++P +F ++ ACA L + GKQLHG +++
Sbjct: 92 DSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVK 151
Query: 171 NGFDDNMFIASSLLDMYAKC--------------------------------GNIRLARC 198
G + F+ S+L+ +Y C G++R +R
Sbjct: 152 LGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRE 211
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+FD M +VSW +I G A +G+ +AI +F M+ V PN V V+VL A S G
Sbjct: 212 LFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGA 271
Query: 259 IDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTL 317
I+ W + + + I +A+ D+ + G + +A + + W +
Sbjct: 272 IELGKWVHLFAEKNEIEIDDVLG--SALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAI 329
Query: 318 LSACRVH 324
+ +H
Sbjct: 330 IGGLAMH 336
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 312/553 (56%), Gaps = 40/553 (7%)
Query: 2 PVSDLVSWNTVIVGLAR-----NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
P + WNT+I + G ++I +M ++PD T +L FA
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR------------------------- 91
+ G+ +H +R GL + + +SLI+MY+ C
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 92 ------VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML---IAKIKPRH 142
V+ + LF ++P ++ ISW+ +I G V+ G + E L FR+M + ++P
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
+ S ++ AC L L GK H I + G ++ + ++L+DMYAKCG++ A +F
Sbjct: 200 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 259
Query: 203 MDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+ + D+++W+A+I G A+HG A + + LF +M GV+PN+V F+AV AC H GL+ +
Sbjct: 260 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 319
Query: 262 AWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
Y MT+DY I P+ +HY + DL GRAG+++EA+ + +M P VW LLS
Sbjct: 320 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 379
Query: 322 RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPA 381
R+H ++E +K+ ++P N GAYV+LSN YA RW+D +R M G+KK P
Sbjct: 380 RMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPG 439
Query: 382 CSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKN 441
CS IEV + F GD SHP +I+ L+E+LER++ EGYV +TKEVL D++EE K+
Sbjct: 440 CSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKEL 499
Query: 442 LLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFH 501
L HSE+LA+ +G + T GT IRI+KNLR+C DCH AIK ISK+ REIIVRD +RFH
Sbjct: 500 ALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFH 559
Query: 502 HFEDGKCSCGDYW 514
HF G CSC DYW
Sbjct: 560 HFTQGLCSCRDYW 572
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP +++SW+ +I G R G Y+EAL + R+M G +++P+ FT+S VL +
Sbjct: 156 MPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGAL 215
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC-LLPVKDAISWNSIIAG 116
GK H Y + G+ +V +G++LI+MYAKC VE + +F L P KD ++W+++I+G
Sbjct: 216 EHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISG 275
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+GL +E + F +M+ ++P V+F ++ AC H + GK +R +D
Sbjct: 276 LAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDY----LRRMTEDY 331
Query: 177 MFIAS-----SLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
I + ++D+Y + G I+ A + M + D++ W A++ G+ +HG+
Sbjct: 332 SIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGD 384
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 311/536 (58%), Gaps = 34/536 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVIKGKE 62
++V+WN V+ G R YEE+ + +M + P+S TL +L + D++ GK
Sbjct: 201 EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKC 260
Query: 63 IHGYAIRHGL-DANVCIGSSLINMYAKCA------------------------------- 90
I+ I+ G+ + N+ + ++LI+M+A C
Sbjct: 261 IYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTC 320
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
R++ + + F +P +D +SW ++I G ++ F E L FR M ++ +KP + SI+
Sbjct: 321 RIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILT 380
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
ACAHL L LG+ I +N ++ FI ++L+DMY KCGN+ A+ IF++M D +
Sbjct: 381 ACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFT 440
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
WTA+I+G A +G+ +A+++F M + V P+ + ++ V+ AC+H GL+ K +F++M
Sbjct: 441 WTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMA 500
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+GI P+ HY + DLLGRAG L+EA E I NM P VW +LL ACRVHKNV+LA
Sbjct: 501 VQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLA 560
Query: 331 GKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK 390
A +I ++P N YV+L N YAA ++WK+ ++R M +G+KK P CS +E+
Sbjct: 561 EMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGI 620
Query: 391 AYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERL 450
Y FVAGDKSHP I L+ + + + GY PDT EV DV EE K+ LY HSE+L
Sbjct: 621 VYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKL 680
Query: 451 AIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
AI + +I + G TIRI+KNLR+C DCH +SK+ RE+IVRD +RFHHF G
Sbjct: 681 AIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 167/346 (48%), Gaps = 46/346 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + WNT+I G +R E +++ + M N+KPD FT +L F + + G
Sbjct: 95 IPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYG 154
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K + +A+ HG LD+N+ + I++++ C V + ++F + + ++WN +++G +
Sbjct: 155 KVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNR 214
Query: 120 NGLFDEGLKFFRQM--LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDN 176
++E + F +M + P V+ ++ AC+ L L GK ++ I+ G + N
Sbjct: 215 FKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPN 274
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA----------------- 219
+ + ++L+DM+A CG + AR +FD+M D++SWT+++ G A
Sbjct: 275 LILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPE 334
Query: 220 -------------LHGNA-HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID----- 260
L N + ++LF M+ VKP+ V++LTAC+H G ++
Sbjct: 335 RDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWA 394
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
K + N + D I A+ D+ + G +++A + + M
Sbjct: 395 KTYIDKNKIKNDTFIG------NALIDMYFKCGNVEKAKKIFNEMQ 434
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 116/229 (50%), Gaps = 2/229 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G R ++E L + R M N+KPD FT+ S+L A + G
Sbjct: 332 MPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELG 391
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ Y ++ + + IG++LI+MY KC VE + ++F + KD +W ++I G N
Sbjct: 392 EWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANN 451
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G +E L F ML A + P +++ +M AC H+ + GK + +++G N+
Sbjct: 452 GHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTH 511
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
++D+ + G+++ A + M + + + W +++ +H N A
Sbjct: 512 YGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLA 560
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 142/313 (45%), Gaps = 13/313 (4%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINM--YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+IH I+ GL +N + +I + V + ++F +P WN++I G +
Sbjct: 53 QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGF-DDNMF 178
+ G+ ++ ML+ IKP +F ++ L GK L + +GF D N+F
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLF 172
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-- 236
+ + +++ CG + AR IFD D ++V+W V+ G ++ LF +MEK
Sbjct: 173 VQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKC 232
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+ V PNSV V +L+ACS + +N K+ + P+ A+ D+ G++
Sbjct: 233 ECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMD 292
Query: 297 EAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
A M T +V W ++++ ++LA K ++ + + ++ + +
Sbjct: 293 AARGVFDEM---KTRDVISWTSIVTGFANTCRIDLARKYFDQ---MPERDYVSWTAMIDG 346
Query: 355 YAAARRWKDAASL 367
Y R+K+ +L
Sbjct: 347 YLRMNRFKEVLTL 359
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/539 (39%), Positives = 312/539 (57%), Gaps = 31/539 (5%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V WN +I G R+G +E + M + + T SVL D++ G ++H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 67 AIRHGLDANVCIGSSLINMYAKCA-------------------------------RVEDS 95
+ G+ + + ++L++MYA+C +V+ +
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 96 HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL 155
LF +P +D I+W ++I G VQ G F + L+ FR M I K++ + S++ ACA L
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
L G+ + R G ++F+ ++L+DMY+KCG+I A +F M D +WTA+I
Sbjct: 307 GALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAII 366
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+G A++G +AI +F +M + P+ V FV VLTAC+HAGL+DK +F SMT+ Y I
Sbjct: 367 LGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNI 426
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
+P+ HY + D+LGRAGKL+EA + I M P +W TLL++CRV+ N E+ AE
Sbjct: 427 SPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAE 486
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFV 395
++ +DP+N AY++LSN YA + RWKD +R + KG+KK P CS IE+ + FV
Sbjct: 487 RLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFV 546
Query: 396 AGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFG 455
A D+SHP I L+ +L + GYVPD EVL +V EE+K+ +LY+HSE+LA+ F
Sbjct: 547 AADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFA 606
Query: 456 IICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ + IRI+KNLR+C DCH AIK ISK+ RE+IVRD +RFHHF G CSC DYW
Sbjct: 607 LLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 2/227 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D ++W +I G + G + +AL R M ++ D FT+ SV+ A + G
Sbjct: 253 MPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG 312
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ Y R G+ +V +G++LI+MY+KC +E + +F + +D +W +II G N
Sbjct: 313 EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVN 372
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E + F +ML A P V+F ++ AC H + G++ + +
Sbjct: 373 GRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVH 432
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
L+D+ + G ++ A DKM + + W ++ ++GN+
Sbjct: 433 YGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSE 479
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 47/327 (14%)
Query: 23 EEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE-----IHGYAIRHGLDANVC 77
EEA+ +M +PD++T S+L A IH + ++ G+++N
Sbjct: 33 EEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAH 92
Query: 78 IGSSLINMYAKCARVEDSHRLF---CLLPVKDA-ISWNSIIAGCVQNGLFDEGLKFFRQM 133
SSLI MYA + + CL A + WN++I+G ++G F+ F M
Sbjct: 93 AASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDM 152
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN- 192
+ A V++ S++ AC L LG Q+H ++ +G + + ++L+DMYA+CG+
Sbjct: 153 VRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDM 212
Query: 193 ------------------------------IRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
+ AR +FD M D ++WTA+I G G
Sbjct: 213 DAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVG 272
Query: 223 NAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WS--YFNSMTKDYGIAPSF 279
DA+ F M+ V+ + V+V+TAC+ G ++ W+ Y + GI
Sbjct: 273 RFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRL----GIKMDV 328
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMH 306
A+ D+ + G ++ A + +MH
Sbjct: 329 FVGNALIDMYSKCGSIERALDVFKDMH 355
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 314/510 (61%), Gaps = 34/510 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V + +IVG + +G E+L + R M ++ + +TLSSVL + D+ G+ IH
Sbjct: 243 DVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIH 302
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL++ A++W S+I G VQNG +
Sbjct: 303 GLIVKAGLES--------------------------------AVTWTSVIVGLVQNGREE 330
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FRQML + I P + SS++ AC+ L L GKQ+H +++ G D + ++ ++L+
Sbjct: 331 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 390
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D Y KCG+ +AR +F+ + D+VS ++I A +G H+A+ LF M+ G++PN+V
Sbjct: 391 DFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNV 450
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++ VL+AC++AGL+++ F+S I + +HYA + DLLGRAG+L+EA I+
Sbjct: 451 TWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQ 510
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
++ +W TLLSACR+H +VE+A +V ++ + P + G +V+LSN YA+ W
Sbjct: 511 VNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKV 569
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++ MR +KK PA SW++V+ + + F+AGD SHP + I E L+EL+E++++ GYV
Sbjct: 570 IEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYV 629
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTP-DGTTIRIIKNLRVCGDCHTAIKF 483
PDT+ VL D++EE+K LYYHSE+LA+ F + + TTIRI+KNLRVCGDCHT +KF
Sbjct: 630 PDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKF 689
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+SKIV R+II RD RFHHF +G CSCGDY
Sbjct: 690 VSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 114/195 (58%), Gaps = 3/195 (1%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+I +A++ G + +G+ LI+ Y KC V + ++F +P + ++WNS+IA ++NG
Sbjct: 99 KIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 156
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIA 180
E + +++M+ I P +FSS+ A + L +H G++ HG + G N+F+
Sbjct: 157 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 216
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMYAK G +R AR + D++ D+V +TA+I+G + HG +++ +F M K G++
Sbjct: 217 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 276
Query: 241 PNSVAFVAVLTACSH 255
N +VL C +
Sbjct: 277 ANEYTLSSVLVCCGN 291
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+SS++ C + ++ ++ ++ GF ++ + L+D Y KCG++ AR +FD++
Sbjct: 81 YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 138
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW- 263
IV+W ++I +G + +AI ++++M DG+ P+ F +V A S GL+ +
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++ S+ G++ F +A+ D+ + GK+++A
Sbjct: 199 AHGQSVVLGVGVSNVFVG-SALVDMYAKFGKMRDA 232
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 307/507 (60%), Gaps = 1/507 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT++ G ++ EEAL ++M +KPD+FT ++L A V +G ++H + +
Sbjct: 56 FNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHIL 115
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+ +V + +SLI+MY KC + +F + + SW+++I G++ + L+
Sbjct: 116 KLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLR 175
Query: 129 FFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
M + S++ AC HL L LG+ +HG ++RN N+ + +SL++MY
Sbjct: 176 LLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMY 235
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG + C+F KM + +S++ +I G A+HG + + +F +M + G++P+ + +V
Sbjct: 236 LKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYV 295
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
VL ACSHAGL+ + FN M ++GI P+ +HY + DL+GRAGK+ EA E I +M
Sbjct: 296 GVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPM 355
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
P + +W +LLSA +VH N++ A+++F +D YV+LSN YA A+RW+D A
Sbjct: 356 EPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVART 415
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R M +KG+ + P S +EVK K + FV+ D HP + E L ++ +++ EGY PDT
Sbjct: 416 RTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDT 475
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
+VL DV+EE+KK L HS++LAI + +I T G+ +RI++NLR+C DCHT K IS I
Sbjct: 476 TQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISII 535
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
REI VRD RFHHF+DG CSC DYW
Sbjct: 536 FDREITVRDRHRFHHFKDGACSCRDYW 562
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 112/206 (54%), Gaps = 9/206 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K+ H ++ GL + S+L+ A CA ++ + +F + + +N+++
Sbjct: 5 KQSHARILKXGLFXDSFCASNLV---ATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMR 61
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V++ +E L +++M +KP + ++ +++ ACA L + G Q+H I++ G ++
Sbjct: 62 GHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEN 121
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F+ +SL+ MY KCG I + +F++M+ + SW+A+I +A G D + L M
Sbjct: 122 DVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMS 181
Query: 236 KDGV-KPNSVAFVAVLTACSHAGLID 260
+G + V+VL+AC+H G +D
Sbjct: 182 NEGYWRAEESILVSVLSACTHLGALD 207
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
M + SW+ +I A G++ + L ++ M N + + L SVL +
Sbjct: 149 MNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDL 208
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ +HG+ +R+ NV + +SLI MY KC + LF + K+ +S++ +I+G
Sbjct: 209 GRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAM 268
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMF 178
+G EGL+ F +ML ++P + + ++ AC+H + G Q + + +G + +
Sbjct: 269 HGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQ 328
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G I A + M + + V W +++ + +H N
Sbjct: 329 HYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNN 374
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKC-----GNIRLARCIFDKMDLHDIVSWTAVIM 216
KQ H I++ G + F AS+L+ A C G++ A IF +MD + ++
Sbjct: 5 KQSHARILKXGLFXDSFCASNLV---ATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMR 61
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
G+ N +A+ +++M + GVKP++ + +L AC+ +++
Sbjct: 62 GHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEG 107
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +S++ +I GLA +G E L I +M L+PD VL + V +G
Sbjct: 251 MAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEG 310
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII-AGC 117
+ + + HG++ + ++++ + +++++ L +P++ + + W S++ A
Sbjct: 311 LQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASK 370
Query: 118 VQNGL 122
V N L
Sbjct: 371 VHNNL 375
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/507 (40%), Positives = 312/507 (61%), Gaps = 1/507 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G +EEAL +M +PD+FT +L + +GK+IHG
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+A+V + +SLINMY +C +E S +F L K A SW+S+++ G++ E L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 129 FFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FR M +K S + ACA+ L+LG +HG ++RN + N+ + +SL+DMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KCG + A IF KM+ + ++++A+I G ALHG A+ +F +M K+G++P+ V +V
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
+VL ACSH+GL+ + F M K+ + P+ EHY + DLLGRAG L+EA E I ++
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 308 GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+ +W T LS CRV +N+EL A+++ + +N G Y+++SN Y+ + W D A
Sbjct: 400 EKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVART 459
Query: 368 RVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
R + KG+K+TP S +E+K K + FV+ D+SHP I + L ++ +++ EGY PD
Sbjct: 460 RTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519
Query: 428 KEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKI 487
++L +V+EE+KK L HS+++AI FG++ TP G+ I+I +NLR+C DCHT K IS I
Sbjct: 520 TQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMI 579
Query: 488 VQREIIVRDNSRFHHFEDGKCSCGDYW 514
+REI+VRD +RFH F+ G CSC DYW
Sbjct: 580 YEREIVVRDRNRFHLFKGGTCSCKDYW 606
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/486 (39%), Positives = 296/486 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL G EE+L + M + PD F L SV A DV+ G
Sbjct: 133 MPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTG 192
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C +++ + +LP +S N+IIAG QN
Sbjct: 193 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 252
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L++F M + V+F S + +C+ L L G+Q+HG +++ G D + +
Sbjct: 253 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 312
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY++CG + + +F D +A+I HG+ AI LF+QM G +
Sbjct: 313 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 372
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+A+L ACSH+GL ++ F MTK YGI PS +HY V DLLGR+G L EA
Sbjct: 373 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEA 432
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ KN ++A ++A+++ +DP++ +YV+LSN A +RR
Sbjct: 433 LILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRR 492
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +R MR+ ++K P SW+E+K + F GD+SHP I+E L+E++ ++ Q
Sbjct: 493 WGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQ 552
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLHD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 553 CGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLA 612
Query: 481 IKFISK 486
IK +S+
Sbjct: 613 IKLMSQ 618
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 8/234 (3%)
Query: 25 ALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
AL +RQ+ D FT + ++ +AD D+ +E+ R NV +
Sbjct: 56 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWN 111
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
L Y K + + +LF +P ++ +WN+++AG G +E L F M + P
Sbjct: 112 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHP 171
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG ++ +
Sbjct: 172 DEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 231
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ IVS +I G +G++ A+ F M GV + V FV+ +++CS
Sbjct: 232 RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS + AC L L +QLH +G + F A+ L+ YA G++ AR +F+++
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++SW + G +G+ A LF++M + N + A++ ++ G +++
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPER----NVATWNAMVAGLTNLGFDEESLG 159
Query: 265 YFNSMTKDYGIAP 277
F M ++ G+ P
Sbjct: 160 LFLDMRRE-GMHP 171
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/515 (38%), Positives = 310/515 (60%), Gaps = 36/515 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + ++V+WN +I G +N E+ +++ +M NLKPD T SSVL
Sbjct: 216 MVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVL------------ 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
Y + ++++ ++F + KD + W +I GC QN
Sbjct: 264 -----------------------GAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQN 300
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L F +ML+ +P + SS++ +CA L +L+ G+ +HG G +D++ ++
Sbjct: 301 GKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVS 360
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY KCG R A IF M ++VSW ++I G AL+G +A+SL+E M ++ +K
Sbjct: 361 SALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLK 420
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV FV VL+AC HAGL+++ YF SM+ +G+ P+ +HYA + +L GR+G + +A +
Sbjct: 421 PDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVD 480
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
IS+M P +W T+LS C + +++ A + ++P N Y++LSN YAA R
Sbjct: 481 LISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGR 540
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD AS+R M++K +KK A SWIE+ N+ + FVA D++HP I+ L L+ ++++
Sbjct: 541 WKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQE 600
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTT-IRIIKNLRVCGDCHT 479
G+ P+T VLHD E++K + YHSE+LA+ +G+I P G T IRIIKN+R C DCH
Sbjct: 601 AGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHI 660
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+KF+S I +R +I+RD++RFHHF +GKCSC DYW
Sbjct: 661 FMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 49/318 (15%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+NTVI G A NG AL + +M LKP +T SVL +D+ +G
Sbjct: 115 MPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRG 174
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG I L NV + ++L ++YA+C ++ + RLF + +++ ++WN +I+G ++N
Sbjct: 175 KQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKN 234
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + F +M ++ +KP V+ A
Sbjct: 235 RQPEKCIDLFHEMQVSNLKPDQVT-----------------------------------A 259
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SS+L Y + G I AR +F ++ D V WT +I+G A +G DA+ LF +M + +
Sbjct: 260 SSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENAR 319
Query: 241 PNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
P+ +V+++C+ + G + ++ + D ++ +A+ D+ + G
Sbjct: 320 PDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVS------SALVDMYCKCGVT 373
Query: 296 QEAYEFISNMHAGPTENV 313
++A+ S M T NV
Sbjct: 374 RDAWTIFSTMQ---TRNV 388
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 108/190 (56%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
++++++YAK VED +F +P +D++S+N++I+G NG L F +M +K
Sbjct: 93 NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P + S++ AC L L GKQ+HG II N+F+ ++L D+YA+CG I AR +
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
FD+M + ++V+W +I G + I LF +M+ +KP+ V +VL A AG I
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYI 272
Query: 260 DKAWSYFNSM 269
D+A F +
Sbjct: 273 DEARKVFGEI 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
F +++L +YAK G + R IFD M D VS+ VI G A +G A+ +F +M+K+
Sbjct: 90 FSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKE 149
Query: 238 GVKPNSVAFVAVLTACSHAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+KP V+VL AC+ L+D + + + + A+ DL R G++
Sbjct: 150 GLKPTEYTHVSVLNACTQ--LLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 297 EAYEFISNM 305
+A M
Sbjct: 208 QARRLFDRM 216
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/521 (38%), Positives = 315/521 (60%), Gaps = 9/521 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFT----LSSVLPIFADYVDV 57
PV ++ WN ++ LA +EAL + MG + + DS++ L + + + A +
Sbjct: 135 PVKNIFVWNALLKALALADHGDEALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPA 194
Query: 58 -IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ +E+H +AIR G + + ++LI+ YAK V + +F +P ++ +SW+++I
Sbjct: 195 SARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGC 254
Query: 117 CVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+N + ++ F+ M+ A + P ++ S++ ACA + L GK LH I+R GFD
Sbjct: 255 YAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFD 314
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ + ++L+ MY +CG + + R IF + D+VSW ++I G +HG +A+ +FE+
Sbjct: 315 SLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEE 374
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M G P+ + F++VL ACSHAGL+++ F SM +YG+ P EHYA + DLLGRAG
Sbjct: 375 MIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAG 433
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
+L EA E I +MH P+ VW LL ACR+H +VE A +F ++P N G YV+L++
Sbjct: 434 QLDEAMELIRSMHIEPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLAD 493
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YA A+ L+ + ++K CSWIEVK K ++F + D +P ++ + E
Sbjct: 494 IYARAKLHNQVGVLKELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGE 553
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
+ +M+ +GYVPDT VL+D+E E+K+ +L HSE+LA+ FG+I T G IRI KNLR+
Sbjct: 554 FVAQMKNQGYVPDTGIVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRL 613
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCH+ KFISK +REI+VRD +RFHHF DG CSCGDYW
Sbjct: 614 CEDCHSVTKFISKFTEREIVVRDVNRFHHFRDGVCSCGDYW 654
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP ++VSW+ +I A+N +A+ + + M + +L P+S T+ SVL A +
Sbjct: 240 MPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALS 299
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGC 117
GK +H Y +R G D+ V + ++L+ MY +C +E +F + +D +SWNS+I+G
Sbjct: 300 HGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGY 359
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G E ++ F +M+ P ++F S++ AC+H ++ GK L ++ G
Sbjct: 360 GMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRA 419
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ ++D+ + G + A + M + W A++ +HG+
Sbjct: 420 EHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIHGH 466
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + LI YA + + ++F PVK+ WN+++ DE L M
Sbjct: 110 LSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLADMGRLG 169
Query: 138 IKPRHVSFSSIMPACAHLTTLHLG-----KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
+ S++ + AC ++ H +++H IR G+ + +A++L+D YAK G
Sbjct: 170 VPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGI 229
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK--PNSVAFVAVL 250
+R A +F M ++VSW+A+I A + DAI LF+ M PNS+ V+VL
Sbjct: 230 VRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVL 289
Query: 251 TACS 254
AC+
Sbjct: 290 NACA 293
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
F + F+++ L++ YA G + AR +FD+ + +I W A++ AL + +A++
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 233 QMEKDGVKPNSVAFVAVLTAC 253
M + GV +S ++ L AC
Sbjct: 164 DMGRLGVPVDSYSYTHGLKAC 184
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 312/518 (60%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLA-RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VSWN+VI L+ +A+ QM T ++L +
Sbjct: 397 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCV 118
+IH +++ L + IG++L++ Y KC + + ++F + +D +SWNS+I+G +
Sbjct: 457 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 516
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
N L + + M+ + +F++I+ ACA + TL G ++H C IR + ++
Sbjct: 517 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 576
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+DMY+KCG I A F+ M L ++ SW ++I G A HG+ A+ LF +M DG
Sbjct: 577 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 636
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ V FV VL+ACSH G +++ + +F SM++ Y ++P EH++ + DLLGRAGKL E
Sbjct: 637 QPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 696
Query: 299 YEFISNMHAGPTENVWLTLLSA-CRVH-KNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+FI++M P +W T+L A CR + +N EL + AE + ++P N YV+L+N YA
Sbjct: 697 GDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYA 756
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ +W+D A R M+ +KK CSW+ +K+ + FVAGDK HP I + L+EL
Sbjct: 757 SGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNR 816
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+M GY+P TK L D+E E K+ LL YHSE++A+ F ++ IRI+KNLRVCGD
Sbjct: 817 KMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGD 875
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A +ISKIV R+I++RD++RFHHFEDGKCSCGDYW
Sbjct: 876 CHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 171/382 (44%), Gaps = 58/382 (15%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL----KP-DSFTLSSVLPIFADYVDV 57
+ + +SWN++I +R G A ++ M L KP D+F+ SVL
Sbjct: 266 IRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE-----EGR 320
Query: 58 IKGKEIHGYAIRHGLDAN-VCIGSSLINMYAKCARV------------------------ 92
KG+E+H + IR GL+ N V IG+ L+NMYAK +
Sbjct: 321 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISG 380
Query: 93 -------EDSHRLFCLLPVKDAISWNSIIAGCVQN-GLFDEGLKFFRQMLIAKIKPRHVS 144
ED+ +F L+P D +SWNS+I + + +K+F QM+ V+
Sbjct: 381 LDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVT 440
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM- 203
F +I+ A + L+ + Q+H +++ D+ I ++LL Y KCG + IF +M
Sbjct: 441 FINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMS 500
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+ D VSW ++I G + H A+ L M + G + +S F +L+AC+ +++
Sbjct: 501 ETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGM 560
Query: 264 SYFNSMTKDYGIAPSFEH----YAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
GI E +A+ D+ + G++ A F M P NV W ++
Sbjct: 561 E-----VHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM---PLRNVYSWNSM 612
Query: 318 LSACRVHKNVELAGKVAEKIFM 339
+S H + E A K+ ++ +
Sbjct: 613 ISGYARHGHGEKALKLFTRMML 634
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 34 NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE 93
N L S T S++ + + +E+H +I++G N+ + ++LIN+Y + +
Sbjct: 92 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 151
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+ +LF + ++ ++W +I+G QNG DE FR M+ A P H +F S + AC
Sbjct: 152 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 211
Query: 154 HL--TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-GNIRLARCIFDKMDLHDIVS 210
+ LG Q+HG I + + ++ + + L+ MY C + AR +FD + + + +S
Sbjct: 212 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 271
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGV----KPN 242
W ++I + G+A A LF M+K+G+ KPN
Sbjct: 272 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPN 307
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 129/284 (45%), Gaps = 25/284 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVI 58
M +LV+W +I G +NG +EA R M P+ + S L +
Sbjct: 160 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 219
Query: 59 KGKEIHGY--AIRHGLDANVCIGSSLINMYAKCA-RVEDSHRLFCLLPVKDAISWNSIIA 115
G +IHG R+G D VC + LI+MY C D+ +F + ++++ISWNSII+
Sbjct: 220 LGVQIHGLISKTRYGSDVVVC--NVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 277
Query: 116 GCVQNGLFDEGLKFFRQM----LIAKIKPRHV--SFSSIMPACAHLTTLHLGKQLHGCII 169
+ G F M L KP FS + G+++H +I
Sbjct: 278 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEG------RRKGREVHAHVI 331
Query: 170 RNGFDDN-MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
R G +DN + I + L++MYAK G I A +F+ M D VSW ++I G + + DA
Sbjct: 332 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 391
Query: 229 SLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+F M E D V NSV + L+ + + +A YF M +
Sbjct: 392 EMFSLMPEYDQVSWNSV--IGALSDSEAS--VSQAVKYFLQMMR 431
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 58/96 (60%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
++LH I+ GF N+F++++L+++Y + G++ A+ +FD+M ++V+W +I G +
Sbjct: 119 RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQN 178
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
G +A + F M + G PN AF + L AC +G
Sbjct: 179 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 312/510 (61%), Gaps = 7/510 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+NT+I G + EEAL + +M ++PD+FT VL + + +G +IH +
Sbjct: 98 YNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVF 157
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ GL+ +V + + LINMY KC +E + +F + K SW+SII ++ E L
Sbjct: 158 KAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLM 217
Query: 129 FFRQMLIAKIKPRHVSFSSIM----PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
M + RH + SI+ AC HL + + G+ +HG ++RN + N+ + +SL+
Sbjct: 218 LLGDM---SGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLI 274
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY K G++ C+F M + S+T +I G A+HG +A+S+F M ++G+ P+ V
Sbjct: 275 DMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDV 334
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+V VL+ACSHAGL+++ FN + ++ I P+ +HY + DL+GRAG L+ AY+ I +
Sbjct: 335 VYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKS 394
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P + VW +LLSAC+VH N+E+ AE IF ++ +N G Y++L+N YA A++W D
Sbjct: 395 MPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADV 454
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M K + +TP S +E Y FV+ DKS P I + ++++ +++ EGY
Sbjct: 455 ARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYT 514
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD +VL DV+E++K+ L +HS++LAI F +I T +G+ IRI +N+R+C DCHT KFI
Sbjct: 515 PDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKFI 574
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S I +REI VRD +RFHHF+DG CSC DYW
Sbjct: 575 SVIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCA-----RVEDSHRLFCLLPVKDAISWNSIIA 115
K++H + ++ GL + GS+L+ A CA +E + +F + + +N++I
Sbjct: 47 KQVHAHILKLGLFYDSFCGSNLV---ATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIR 103
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V + +E L + +ML I+P + ++ ++ AC+ L L G Q+H + + G +
Sbjct: 104 GNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEG 163
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F+ + L++MY KCG I A +F++MD + SW+++I +A H+ + L M
Sbjct: 164 DVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMS 223
Query: 236 KDGV-KPNSVAFVAVLTACSHAG 257
+G + V+ L+AC+H G
Sbjct: 224 GEGRHRAEESILVSALSACTHLG 246
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA--KCGNIRLARCIFDKMD 204
S++ C + KQ+H I++ G + F S+L+ A + G++ A IF +++
Sbjct: 35 SLLKRCKSMEEF---KQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIE 91
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ +I GN N +A+ L+ +M + G++P++ + VL ACS G + +
Sbjct: 92 EPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQ 151
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+ K G+ + ++ G+ G ++ A M + W +++ A H
Sbjct: 152 IHAHVFKA-GLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVAS-WSSIIGA---H 206
Query: 325 KNVEL 329
+VE+
Sbjct: 207 ASVEM 211
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 304/540 (56%), Gaps = 32/540 (5%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIKGKEIHG 65
V WN +I G R + EA M P T SVL DV+ G ++HG
Sbjct: 110 VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHG 169
Query: 66 YAIRHGLDANVCIGSSLINMYAKCA-------------------------------RVED 94
+ G+ ++ + ++L++MYA+CA RV++
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ LF +P +D +SW ++I G VQ F E L+ FR+M + + + S++ ACA
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L L +G+ + + R G + F+ ++L+DMY+KCG+I A +F M D +WTA+
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAI 349
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I+G A++G +AI +F +M P+ V F+ VLTAC+HAGL+DK +F SM + Y
Sbjct: 350 ILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYN 409
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
IAP+ HY + DL GRAGK+ EA + I M P +W TLL+ACRVH N E+ V
Sbjct: 410 IAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVT 469
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
E++ +DP N Y +LSN YA RW+D LR + KG+KK P CS IE+ + F
Sbjct: 470 ERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEF 529
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
VAGD+SHP I L+ ++ + GY PD EV +V EE+K+ +L++HSE+LAI F
Sbjct: 530 VAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAF 589
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
++ + T IRI+KNLR+C DCH AIK IS++ RE++VRD +RFHHF G CSC DYW
Sbjct: 590 ALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW +I G + + EAL + R+M N+ D FT+ SV+ A + G
Sbjct: 237 MPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMG 296
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + Y R G+ + +G++LI+MY+KC +E + +F + +D +W +II G N
Sbjct: 297 EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVN 356
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD--DNMF 178
G +E ++ F +M+ P V+F ++ AC H + G++ +R ++ N+
Sbjct: 357 GYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFF-LSMRETYNIAPNVV 415
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH 225
++D++ + G I A D+M + + W ++ +HGN+
Sbjct: 416 HYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSE 463
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 33/300 (11%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
PD++T +L A + +H + ++ G+ N + +SL+ YA + L
Sbjct: 41 PDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARAL 100
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT-T 157
+ WN++I+G + F E F M A P V++ S++ AC T
Sbjct: 101 LSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGD 160
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC--------------------------- 190
+ LG Q+HG ++ +G ++ + ++L+DMYA+C
Sbjct: 161 VLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSG 220
Query: 191 ----GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
G + AR +F +M D VSWTA+I G +A+ +F +M+ V +
Sbjct: 221 LTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTM 280
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V+V+TAC+ G ++ + GI A+ D+ + G ++ A + +MH
Sbjct: 281 VSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMH 339
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/520 (38%), Positives = 311/520 (59%), Gaps = 8/520 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYE-----EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD 56
P ++V +N +I G + + EAL + QM +KP FT SS++ I ++++
Sbjct: 275 PNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKI-CNHIE 333
Query: 57 VIK-GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+ GK+IH + +H + ++ IGS+LI +Y+ ED + F P D +SW ++IA
Sbjct: 334 AFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIA 393
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G QNG F+ L F ++L + KP ++++ ACA + G+Q+HG ++ G
Sbjct: 394 GYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGT 453
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ +S + MYAK GN+ A+ F+++ D+VSW+ +I NA HG+A DAI+LFE M+
Sbjct: 454 LAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMK 513
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G+ PN + F+ VLTACSH GL+++ Y+ SM KDY + + +H + DLL RAG+L
Sbjct: 514 SYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRL 573
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
+A FI N G +W TLLS CR++K++ VAEK+ +DP +YV+L N Y
Sbjct: 574 LDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIY 633
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A A +R M+++G++K P SWIEV N+ ++FV GD SHP I + L+ +L
Sbjct: 634 TDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGML 693
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNL-LYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
E+ + GY+ + + +E K L + +HSE+LA+ FGI+ P ++++KNLRVC
Sbjct: 694 EKKRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVC 753
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH +K IS + +REII+RD+ RFHHF++G CSC DYW
Sbjct: 754 HDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 136/262 (51%), Gaps = 7/262 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++S+N +I G G Y +A+ + + LK D F+ + VL D G
Sbjct: 70 MSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALG 129
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IHG AI GL V + + LI+MY KC R++ + LF D +SWNS+I G +
Sbjct: 130 KVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARV 189
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTL-HLGKQLHGCIIRNGFDDNMF 178
G ++E LK +M ++ + S + +C +L + GK LHG ++ G D ++
Sbjct: 190 GAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIV 249
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-----AHDAISLFEQ 233
+ ++LLDMYAK G + A +F ++V + A+I G + A++A+ LF Q
Sbjct: 250 VGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQ 309
Query: 234 MEKDGVKPNSVAFVAVLTACSH 255
M++ G+KP+ F +++ C+H
Sbjct: 310 MQRQGIKPSDFTFSSIIKICNH 331
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
DS + ++ + I GK H + I+ + + + ++ +N+Y+K + ++ +LF
Sbjct: 8 DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+ + IS+N +I+G G + + + F + +A +K S++ ++ AC +
Sbjct: 68 DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
LGK +HG I G +F+ + L+DMY KC I AR +F+ D D VSW ++I G A
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM---TKDYGIA 276
G + + L +M G++ N+ + L +C ++ SY ++ T G+
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLN--LNNMVSYGKTLHGYTVKQGLD 245
Query: 277 PSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
A+ D+ + G L +A + P +NV
Sbjct: 246 LDIVVGTALLDMYAKTGYLGDAIQL---FRTSPNQNV 279
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 310/518 (59%), Gaps = 9/518 (1%)
Query: 5 DLVSWNTVIVGLAR-------NGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
D+V +NT++ G AR EEA + +M + PD++T S+L A
Sbjct: 99 DVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAG 158
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+G++ HG A++ G + + +LINMYA+C + +F + + +S+N++I
Sbjct: 159 EEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAA 218
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
V++ E L FR+M +K V+ S++ ACA L L LG+ +H + + D +
Sbjct: 219 VRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLV 278
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+DMY KCG++ A +F M+ D +W+ +I+ A H +AISLFE+M+K
Sbjct: 279 KVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQ 338
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+KP+ V F+ VL ACSH+GL+ + YF+SM +++G+ P +HY VADLL R+G+L
Sbjct: 339 GIKPDDVTFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDR 397
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI + PT +W TLLSAC + +L +V E+I +D ++ G YVI SN A
Sbjct: 398 AYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCAN 457
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
RW++ +R M KG+ K P CS IEV N+ + F AGD HP + ++E+
Sbjct: 458 TGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQ 517
Query: 418 MEQEGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
++ GYVP+T V H ++ EE+K L YHSE+LAI FG++ T GTT+R++KNLRVC D
Sbjct: 518 LKLAGYVPNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPD 577
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+ K +S + R II+RD +RFHHFEDG CSCGDYW
Sbjct: 578 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM-----YAKCGNIRLARCIFDK 202
++P TTL QLH +++G + + LL + AK + AR +FD+
Sbjct: 34 LLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDR 93
Query: 203 MD-LHDIVSWTAVIMGNA-------LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ D+V + ++ G A A +A +F +M ++GV P++ FV++L AC+
Sbjct: 94 IPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACA 153
Query: 255 HA 256
A
Sbjct: 154 AA 155
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +W+ +IV A + EA+++ +M +KPD T VL + V +G
Sbjct: 304 MESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEG 363
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD-AISWNSIIAGCVQ 119
+ GL + + ++ A+ +++ ++ LP+K AI W ++++ C
Sbjct: 364 LQYFDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGS 423
Query: 120 NGLFDEGLKFFRQML 134
G D G + F ++L
Sbjct: 424 RGDADLGKQVFERIL 438
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/514 (39%), Positives = 316/514 (61%), Gaps = 6/514 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
V+WN ++ +G EAL + R+M + + +PD F+ S + ++ D+ +G+EIH
Sbjct: 98 VTWNAMMTNYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIH 157
Query: 65 GYAIRHG--LDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSIIAGCVQNG 121
R G L +V +G++L+NMY+KC +E++ ++F + D++ WN++IA Q+G
Sbjct: 158 EMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHG 217
Query: 122 LFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ L +R M + P+ +F +++ CA L+ L G+ +H + FD N+ ++
Sbjct: 218 RGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVS 277
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+ MY KCG + A +F M L D +SW +I A HG++ A+ L+++M+ GVK
Sbjct: 278 NALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVK 337
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P V FV +L+ACSH GL+ YF M D+ I PS H+ + DLLGR G+L EA
Sbjct: 338 PTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAEL 397
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
+ +M W++LL AC+ H +++ + A+++ P G YV+LSN YAAA R
Sbjct: 398 VLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGR 457
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKD +R M +G+KK+P SWIE+ + + FV+GD+SHP I L +++E M+
Sbjct: 458 WKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKG 517
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT V HD+EEE+K++LL HSE+LAIV+G + P + +RI+KNLRVC DCHTA
Sbjct: 518 LGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTA 577
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+S+I R+I+VRD +RFH FE+G CSC DYW
Sbjct: 578 TKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 164/326 (50%), Gaps = 10/326 (3%)
Query: 13 IVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD--VIKGKEIHGYAIRH 70
+ + NG + EAL R+M +PD T S +L A + +G+EIH YA
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 71 GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFF 130
GL NV +G+++I+MY KC R++D+ F L K++++WN+++ +G E L+ F
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 131 RQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG--FDDNMFIASSLLDM 186
R+M +P SFS + AC++L L G+++H + R G ++ + ++LL+M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 187 YAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSV 244
Y+KCG++ AR +FD + D V W A+I A HG A+ L+ M + + P
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV V+ C+ + + + ++ + + A+ + G+ G L EA + +
Sbjct: 241 TFVTVIDVCAELSALKQGRA-IHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299
Query: 305 MHAGPTENVWLTLLSACRVHKNVELA 330
M E W T++S+ H + + A
Sbjct: 300 MKL-KDEISWNTIISSYAYHGHSDQA 324
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP------IFADY 54
M + D +SWNT+I A +G ++AL + ++M +KP T +L + AD
Sbjct: 300 MKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG 359
Query: 55 VDVIKGKEIHGYAIR--HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWN 111
+D Y ++ H + +V +I++ + R+ ++ + +P++ +A+ W
Sbjct: 360 LDYF-------YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 412
Query: 112 SIIAGCVQNGLFDEGLKFFRQML 134
S++ C +G G++ Q++
Sbjct: 413 SLLGACKTHGDLKRGVRAADQVV 435
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/548 (39%), Positives = 316/548 (57%), Gaps = 35/548 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D ++W +V+ L + L + L + L+PD F S+++ A+ +
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKC------------------------------ 89
GK++H + I + + SSL++MYAKC
Sbjct: 61 GKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 90 -ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK-PRHVSFSS 147
R E++ LF LPVK+ SW ++I+G VQ+G E F +M ++ + SS
Sbjct: 121 SGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 180
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ ACA+L G+Q+HG +I GFD +FI+++L+DMYAKC ++ A+ IF +M D
Sbjct: 181 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 240
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSWT++I+G A HG A A++L+++M GVKPN V FV ++ ACSH G + K F
Sbjct: 241 VVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQ 300
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SMTKDYGI PS +HY + DLLGR+G L EA I M P E W LLSAC+
Sbjct: 301 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQG 360
Query: 328 ELAGKVAEKIF-MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIE 386
++ ++A+ + P + Y++LSN YA+A W + R + + ++K P S +E
Sbjct: 361 QMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLGDMEVRKDPGYSSVE 420
Query: 387 VKNKAYAFVAGDKSHPFYHRINEALKELLERME-QEGYVPDTKEVLHDVEEEQKKNLLYY 445
V+ + F AG+ SH I LK+L E M + GYVPDT +LHD++E++K+ LL++
Sbjct: 421 VRKETEVFYAGETSHALKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 480
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSER A+ +G++ GT IRI+KNLRVCGDCH +K IS+I +REIIVRD +R+HHF+
Sbjct: 481 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 540
Query: 506 GKCSCGDY 513
GKCSC D+
Sbjct: 541 GKCSCNDF 548
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/486 (39%), Positives = 295/486 (60%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ +WN ++ GL G EE+L M + PD F L SV A DV+ G
Sbjct: 133 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 192
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H Y +R GLD ++C+GSSL +MY +C +++ + +LP +S N+IIAG QN
Sbjct: 193 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 252
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L++F M + V+F S + +C+ L L G+Q+HG +++ G D + +
Sbjct: 253 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 312
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY++CG + + +F D +A+I HG+ AI LF+QM G +
Sbjct: 313 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 372
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V F+A+L ACSH+GL ++ F MTK YG+ PS +HY V DLLGR+G L EA
Sbjct: 373 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEA 432
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P +W TLLSAC+ KN ++A ++A+++ +DP++ +YV+LSN A +RR
Sbjct: 433 LILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRR 492
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W D + +R MR+ ++K P SW+E+K + F GD+SHP I+E L+E++ ++ Q
Sbjct: 493 WGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQ 552
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY PD VLHD+E+E+K+ L +HSE+LAI F + P+G IR++KNLRVC DCH A
Sbjct: 553 CGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLA 612
Query: 481 IKFISK 486
IK +S+
Sbjct: 613 IKLMSQ 618
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 25 ALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
AL +RQ+ D FT + ++ +AD D+ +E+ R NV +
Sbjct: 56 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWN 111
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
L Y K + + +LF +P ++ +WN+++AG G +E L FF M + P
Sbjct: 112 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 171
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIF 200
S+ CA L + G+Q+H ++R+G D +M + SSL MY +CG ++ +
Sbjct: 172 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 231
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+ IVS +I G +G++ A+ F M GV + V FV+ +++CS
Sbjct: 232 RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
FS + AC L L +QLH +G + F A+ L+ YA G++ AR +F+++
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+++SW + G +G+ A LF++M + N + A++ ++ G +++
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPER----NVATWNAMVAGLTNLGFDEESLG 159
Query: 265 YFNSMTK------DYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+F M + ++G+ F A + D++ G+ AY
Sbjct: 160 FFLDMRREGMHPDEFGLGSVFRCCAGLRDVV--TGRQVHAY 198
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/517 (39%), Positives = 310/517 (59%), Gaps = 7/517 (1%)
Query: 4 SDLVSWNTVIVGLARNGLYEEA-----LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
SD V +NT++ G AR+ + + + +M + PD++T S+L A
Sbjct: 91 SDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGE 150
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G++ H A++ G + + +LINMYA+C + F +S+N++IA V
Sbjct: 151 HGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAV 210
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++ E L FR+M + P V+ S++ ACA L L LG+ LH + + G +
Sbjct: 211 RSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVK 270
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++++L+DMYAKCG++ A +F M+ D +W+ +I+ A HG +AISLFE+M+K G
Sbjct: 271 VSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQG 330
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP+ + F+ +L ACSH+GL+ + YF+ M KD+GI P +HY V DLL R+G+L+ A
Sbjct: 331 MKPDDITFLGLLYACSHSGLVSEGLRYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERA 389
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FI + PT +W TLLSAC H +VEL +V E+I +D ++ G YVI SN A
Sbjct: 390 YKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANT 449
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
W++ +R M +KG+ K P CS IE+ N + F AGD HP + + E+++++
Sbjct: 450 GYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQL 509
Query: 419 EQEGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ GY+PDT V H ++ EE+K L YHSE+LAI FG++ T G T+R++KNLRVC DC
Sbjct: 510 KLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDC 569
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+ KF+S + R II+RD +RFHHFE G CSCGDYW
Sbjct: 570 HSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +W+ +IV A +G EA+++ +M +KPD T +L + V +G
Sbjct: 295 MESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEG 354
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSIIAGCVQ 119
HG+ + + ++ A+ ++E +++ LP+ I W ++++ C
Sbjct: 355 LRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGG 414
Query: 120 NGLFDEGLKFFRQML 134
+G + G + F ++L
Sbjct: 415 HGDVELGKRVFERIL 429
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/513 (40%), Positives = 306/513 (59%), Gaps = 42/513 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN +I G + G E +++ +M LKPD T+S+VL
Sbjct: 220 NVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL---------------- 263
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
N Y +C RV+D+ LF LP KD I W ++I G QNG +
Sbjct: 264 -------------------NAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREE 304
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ F ML +KP + SS++ +CA L +L+ G+ +HG ++ G D++M ++S+L+
Sbjct: 305 DAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALV 364
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG AR IF+ M + ++++W A+I+G A +G +A++L+E+M+++ KP+++
Sbjct: 365 DMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNI 424
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV VL+AC +A ++ + YF+S++ ++GIAP+ +HYA + LLGR+G + +A + I
Sbjct: 425 TFVGVLSACINADMVKEGQKYFDSIS-EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQG 483
Query: 305 MHAGPTENVWLTLLSACRVH--KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
M P +W TLLS C KN ELA A +F +DP N G Y++LSN YAA RWK
Sbjct: 484 MPHEPNYRIWSTLLSVCAKGDLKNAELA---ASHLFELDPRNAGPYIMLSNLYAACGRWK 540
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
D A +R M+ K KK A SW+EV NK + FV+ D HP +I L L+ ++Q G
Sbjct: 541 DVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIG 600
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTT-IRIIKNLRVCGDCHTAI 481
Y PDT VLH+V EE+K + YHSE+LA+ F +I P+G IRIIKN+RVC DCH +
Sbjct: 601 YNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFM 660
Query: 482 KFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF S + R II+RD++RFHHF GKCSC D W
Sbjct: 661 KFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 35/395 (8%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
DSF + +L ++A + + + + + +V ++L++ YAK VE+ H +F
Sbjct: 57 DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKR----DVYSWNTLLSAYAKMGMVENLHVVF 112
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+P +D++S+N++IA NG + LK +M +P S + + AC+ L L
Sbjct: 113 DQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLR 172
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
GKQ+HG I+ +N F+ +++ DMYAKCG+I AR +FD M ++VSW +I G
Sbjct: 173 HGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYV 232
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
GN ++ I LF +M+ G+KP+ V VL A G +D A + F + K I
Sbjct: 233 KMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEIC--- 289
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNM---HAGPTENVWLTLLSAC----RVHKNVELAGK 332
+ + + G+ ++A+ +M + P +++S+C ++ + GK
Sbjct: 290 --WTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGK 347
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
V + M N+M L + Y DA RV ++ +W
Sbjct: 348 V---VVMGIDNSMLVSSALVDMYCKCGVTLDA---RVIFETMPIRNV--ITW-------N 392
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDT 427
A + G + ++ EAL L ERM+QE + PD
Sbjct: 393 AMILGYAQNG---QVLEALT-LYERMQQENFKPDN 423
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 107/193 (55%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D + W T+IVG A+NG E+A + M N+KPDS+T+SS++ A + G
Sbjct: 282 LPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHG 341
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG + G+D ++ + S+L++MY KC D+ +F +P+++ I+WN++I G QN
Sbjct: 342 QVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQN 401
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L + +M KP +++F ++ AC + + G++ I +G +
Sbjct: 402 GQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHY 461
Query: 181 SSLLDMYAKCGNI 193
+ ++ + + G++
Sbjct: 462 ACMITLLGRSGSV 474
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 35/254 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+NT+I A NG +AL ++ +M +P ++ + L + +D+ G
Sbjct: 115 MPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHG 174
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG + L N + +++ +MYAKC ++ + LF + K+ +SWN +I+G V+
Sbjct: 175 KQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKM 234
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E + F +M ++ +KP V+ S+++ A
Sbjct: 235 GNPNECIHLFNEMQLSGLKPDLVTVSNVLNA----------------------------- 265
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
Y +CG + AR +F K+ D + WT +I+G A +G DA LF M + VK
Sbjct: 266 ------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVK 319
Query: 241 PNSVAFVAVLTACS 254
P+S +++++C+
Sbjct: 320 PDSYTISSMVSSCA 333
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ ++++WN +I+G A+NG EAL + +M N KPD+ T VL + V +G
Sbjct: 383 MPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEG 442
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS-WNSIIAGCVQ 119
++ HG+ + + +I + + V+ + L +P + W+++++ C +
Sbjct: 443 QKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAK 502
Query: 120 NGLFDEGLKFFRQMLIAKIKPR----HVSFSSIMPACA 153
L + L + ++ PR ++ S++ AC
Sbjct: 503 GDLKNAELAASH---LFELDPRNAGPYIMLSNLYAACG 537
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/533 (39%), Positives = 306/533 (57%), Gaps = 31/533 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W+ +I +N +YEEA+ M + + D S L A+ + V GK IH
Sbjct: 340 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIH 399
Query: 65 GYAIRHGLDANVCIGSSLINMYAKC-----AR--------------------------VE 93
+++ G ++ + + ++LI MY+KC AR V+
Sbjct: 400 SLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVD 459
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ +F +P KD +SW+S+I+G QN LFDE L F++M ++ KP + S++ ACA
Sbjct: 460 NAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACA 519
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L GK +H I RNG N+ + ++L+DMY KCG + A +F M I +W A
Sbjct: 520 RLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNA 579
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I+G A++G ++ +F M+K V PN + F+ VL AC H GL+D+ +F SM D+
Sbjct: 580 LILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDH 639
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
I P+ +HY + DLLGRAGKLQEA E ++ M P W LL AC+ H + E+ +V
Sbjct: 640 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
K+ + P++ G +V+LSN YA+ +W D +R M + K P CS IE +
Sbjct: 700 GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHE 759
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F+AGDK+HP I + L E+ +++ EGY PD EVL DV+EE+K++ L+ HSE+LAI
Sbjct: 760 FLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIA 819
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
FG+I T IRI+KNLR+C DCHTA K ISK R+I+VRD RFHHFE G
Sbjct: 820 FGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 2/226 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSW+++I G A+N L++E L + ++M KPD TL SV+ A + +G
Sbjct: 468 MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG 527
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y R+GL NV +G++LI+MY KC VE + +F + K +WN++I G N
Sbjct: 528 KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMN 587
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFI 179
GL + L F M + P ++F ++ AC H+ + G+ + I + N+
Sbjct: 588 GLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH 647
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
++D+ + G ++ A + ++M + D+ +W A++ HG++
Sbjct: 648 YGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDS 693
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 164/384 (42%), Gaps = 103/384 (26%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V D VSWN+++ G G EEA +I QM P+ ++S
Sbjct: 276 VLDSVSWNSILAGYIEIGNVEEAKHIYHQM------PERSIIAS---------------- 313
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+S+I ++ V ++ +LF + KD ++W+++IA QN +
Sbjct: 314 -----------------NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEM 356
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++E ++ F M + V S + ACA+L +++GK +H ++ G + + + ++
Sbjct: 357 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 416
Query: 183 LLDMYAKCGNIRLAR-------------------------------CIFDKMDLHDIVSW 211
L+ MY+KCG+I +AR IFD M D+VSW
Sbjct: 417 LIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSW 476
Query: 212 TAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK-----AWSYF 266
+++I G A + + ++LF++M+ G KP+ V+V++AC+ +++ A+
Sbjct: 477 SSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR 536
Query: 267 NSMTKD------------------------YG-IAPSFEHYAAVADLLGRAGKLQEAYEF 301
N +T + YG I + A+ L G ++ + +
Sbjct: 537 NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDM 596
Query: 302 ISNM---HAGPTENVWLTLLSACR 322
SNM H P E ++ +L ACR
Sbjct: 597 FSNMKKCHVTPNEITFMGVLGACR 620
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
A + + M + L D++T ++ + + K++H + ++ G D++V + ++LIN
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
++ C+ + D+ R+F V D++SWNSI+AG ++ G +E + QM
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP---------- 306
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ ++ ++S++ ++ G + A +FD+M
Sbjct: 307 -----------------------------ERSIIASNSMIVLFGMRGLVVEACKLFDEML 337
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
D+V+W+A+I + +AI F M K GV + V V+ L+AC++
Sbjct: 338 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ ML + + ++ ++ AC+ + KQ+H +++ GFD ++++ ++L++
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
++ C N+ A +F++ + D VSW +++ G GN +A ++ QM + + +A
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI----IA 312
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+++ GL+ +A F+ M + + ++A+ + +EA M
Sbjct: 313 SNSMIVLFGMRGLVVEACKLFDEMLEKDMVT-----WSALIACFQQNEMYEEAIRTFVGM 367
Query: 306 H---AGPTENVWLTLLSAC 321
H E V ++ LSAC
Sbjct: 368 HKIGVMVDEVVAVSALSAC 386
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/510 (38%), Positives = 307/510 (60%), Gaps = 1/510 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+V+WN +I G + N E+ VR+M L PD T+ ++LP A ++ GK +H
Sbjct: 293 IVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVH 352
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+AIR+G ++ + ++L++MY +C +++ + LF + ++ ISWN++IA +NG
Sbjct: 353 GFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENR 412
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + F+ + +KP + +SI+PA A L +L +Q+HG + + D N F+++S++
Sbjct: 413 KAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIV 472
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY KCGN+ AR IFD+M D++SW VIM A+HG +I LF +M + G +PN
Sbjct: 473 FMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGS 532
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FV++L +CS AGL+++ W YFNSM +DY I P EHY + DL+GR G L A FI
Sbjct: 533 TFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEE 592
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT +W +LL+A R +VELA AE I ++ +N G YV+LSN YA A RW+D
Sbjct: 593 MPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDV 652
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
++ M+ +G++K+ CS +++ +K + FV D+S + + + L + +++ ++ YV
Sbjct: 653 ERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYV 712
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
+ E+++ N HS RLAI FG+I T G + + KN+R+C CH K I
Sbjct: 713 HSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRI 772
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S+ +REIIVRD+ FHHF G CSCGDYW
Sbjct: 773 SETTKREIIVRDSKIFHHFNGGHCSCGDYW 802
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 187/348 (53%), Gaps = 9/348 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV DLVSWN++I G G +L+ R+M +K D F++ +L + + G
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH +R L+ +V + +SL++MYAKC R++ + RLF + K ++WN++I G N
Sbjct: 247 KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLN 306
Query: 121 GLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E + R+M K+ P ++ +++P CA L + LGK +HG IRNGF ++ +
Sbjct: 307 AQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVL 366
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY +CG ++ A C+F +M+ +++SW A+I +G A++LF+ + +
Sbjct: 367 ETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTL 426
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP++ ++L A + + +A +TK + +F + V + G+ G L A
Sbjct: 427 KPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVF-MYGKCGNLLRAR 485
Query: 300 EFISNMHAGPTENVWLTLLSACRVHK----NVELAGKVAEKIFMIDPN 343
E M + W T++ A +H ++EL ++ EK F +PN
Sbjct: 486 EIFDRMTFKDVIS-WNTVIMAYAIHGFGRISIELFSEMREKGF--EPN 530
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 164/307 (53%), Gaps = 2/307 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D WN +I G NGL+ +A++ +M ++ D+FT V+ D+ +G
Sbjct: 86 MRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEG 145
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG I+ GLD ++ IG+SLI MYAK +E + +F +PV+D +SWNS+I+G V
Sbjct: 146 ERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSV 205
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G L FR+M + IK S I+ AC+ L GK++H ++R+ + ++ +
Sbjct: 206 GDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQ 265
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-V 239
+SL+DMYAKCG + A +FD++ IV+W A+I G +L+ + ++ + +M++ G +
Sbjct: 266 TSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKL 325
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + + +L C+ I S ++ G P A+ D+ G GKL+ A
Sbjct: 326 HPDWITMINLLPPCAQLEAILLGKSVHGFAIRN-GFLPHLVLETALVDMYGECGKLKPAE 384
Query: 300 EFISNMH 306
M+
Sbjct: 385 CLFGQMN 391
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 102/177 (57%)
Query: 83 INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
++ Y + ++++ LF + D WN +I G V NGLF + + F+ +M ++ +
Sbjct: 67 LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
++ ++ AC L L G+++HG +I++G D +++I +SL+ MYAK G I A +F +
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
M + D+VSW ++I G G+ ++S F +M+ G+K + + + +L ACS G +
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 119/222 (53%), Gaps = 7/222 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +L+SWN +I +NG +A+ + + + N LKPD+ T++S+LP +A+ + +
Sbjct: 390 MNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREA 449
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGY + LD+N + +S++ MY KC + + +F + KD ISWN++I +
Sbjct: 450 EQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIH 509
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ F +M +P +F S++ +C+ ++ G + + R+ ++ N I
Sbjct: 510 GFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRD-YNINPGIE 568
Query: 181 --SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL 220
+LD+ + GN+ A+ ++M L + TA I G+ L
Sbjct: 569 HYGCILDLIGRTGNLDHAKNFIEEMPL----APTARIWGSLL 606
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/517 (40%), Positives = 313/517 (60%), Gaps = 7/517 (1%)
Query: 4 SDLVSWNTVIVGLAR--NGLYEEALNIVR---QMGNVNLKPDSFTLSSVLPIFADYVDVI 58
+D V +NT++ G AR N EA VR +M + PD++T S+L A
Sbjct: 91 ADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGE 150
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G++ H A++ G + + +LINMYA+C + +F +S+N++IA V
Sbjct: 151 EGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAV 210
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++ E L FR+M +KP V+ S++ ACA L L LG+ +H + + G +
Sbjct: 211 RSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVK 270
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++++L+DMYAKCG++ A +F M+ D +W+ +I+ A HG +AISLFE+M+K+G
Sbjct: 271 VSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEG 330
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+KP+ + F+ VL ACSH+GL+ + YF+ M KD+GI P +HY V DLL R+G+L+ A
Sbjct: 331 MKPDDITFLGVLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERA 389
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y+FI + PT +W TLLSAC H + EL +V E+I +D ++ G YVI SN A
Sbjct: 390 YKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANT 449
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
W++ +R M KG+ K P CS IE+ N + F AGD HP + + E+++++
Sbjct: 450 GYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQL 509
Query: 419 EQEGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ GYVP+T V H ++ EE+K L YHSE+LAI FG++ T G T+R++KNLRVC DC
Sbjct: 510 KLVGYVPNTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDC 569
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+ K +S + R II+RD +RFHHFE+G CSCGDYW
Sbjct: 570 HSMAKLVSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +W+ +IV A +G EA+++ +M +KPD T VL + V +G
Sbjct: 295 MESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEG 354
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNSIIAGCVQ 119
+ HG+ + + ++ A+ ++E +++ LP+ I W ++++ C
Sbjct: 355 LQYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGG 414
Query: 120 NGLFDEGLKFFRQML 134
+G F+ G + F ++L
Sbjct: 415 HGDFELGKRVFERIL 429
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 136/344 (39%), Gaps = 72/344 (20%)
Query: 133 MLIAKIK---PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY-- 187
+L AK K P+ S +P C L TL QLH ++ G + + + LL +
Sbjct: 13 LLPAKPKSPPPQQHPVLSHLPHCTSLRTL---AQLHAAAVKAGLAAHPALVTRLLTLCTG 69
Query: 188 --AKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGN-----AHDAISLFEQMEKDGV 239
A ++ AR +FD++ D V + ++ G A N A A+ +F +M ++GV
Sbjct: 70 PDAGPAHLAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGV 129
Query: 240 KPNSVAFVAVLTACSHA----------------GLIDKAW---SYFNSMTK--------- 271
P++ FV++L AC+ A G D + + N +
Sbjct: 130 APDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARV 189
Query: 272 -----DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKN 326
D G S+ A A R G+ + + PT +++LSAC +
Sbjct: 190 MFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGA 249
Query: 327 VELAGKVAEKIFMIDPNNMGAYVILS----NTYAAARRWKDAASLRVFMRNKGMKKTPAC 382
+EL V + + I +G+ V +S + YA +DA + VF +GM+
Sbjct: 250 LELGRWVHDYVRKI---GLGSLVKVSTALIDMYAKCGSLEDA--IDVF---QGMESKDRQ 301
Query: 383 SWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+W V AYA H L E M++EG PD
Sbjct: 302 AW-SVMIVAYA----------NHGYGREAISLFEEMKKEGMKPD 334
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 317/550 (57%), Gaps = 39/550 (7%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V DLVS+NT+I G A E AL + +M N + PD FT ++ + + + GK+
Sbjct: 174 VRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQ 233
Query: 63 IHG--YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV---------------- 104
IH Y +D+N+ + S++++MYAKC + + R+F +
Sbjct: 234 IHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYAR 293
Query: 105 ----------------KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+D ISW ++I+G Q G E L+ F++M IKP V+ ++
Sbjct: 294 CGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAV 353
Query: 149 MPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGNIRLARCIFDKM--DL 205
+ ACA L LGK+L+ I NG F+ N + ++++DMYAKCG+I A IF ++ ++
Sbjct: 354 LSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNM 413
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+ ++I G A HG AI++F ++ G+KP+ V FV VL AC H+GLI++
Sbjct: 414 KTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKL 473
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F SM YGI P EHY + DLLGR G L+EAY+ + M +W LLSACR H
Sbjct: 474 FESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
NV++ +K+ ++ + YV+LSN A A +W++A +R M + G++K P S+I
Sbjct: 534 NVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYI 593
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
E+ + FVA DKSHP I LK++ R++ GYVP+T +V+ D++EE+K++++ Y
Sbjct: 594 ELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSY 653
Query: 446 HSERLAIVFGII-CTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
HSE+LA+ FG++ C+P TIRI+KNLR+C DCH A K +S+I REI VRD RFHHF
Sbjct: 654 HSEKLALAFGLMYCSPT-DTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFR 712
Query: 505 DGKCSCGDYW 514
+G CSC D+W
Sbjct: 713 NGSCSCMDFW 722
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 167/343 (48%), Gaps = 39/343 (11%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WNT+I G +R+ EA+ + M + P++FT +L A + G E+
Sbjct: 74 NLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEV 133
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H + I+HG ++++ + ++LI++Y+ + + LF V+D +S+N++I G +
Sbjct: 134 HSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP 193
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMFIAS 181
+ L F +M + I P +F ++ C+ L ++GKQ+H + +N D N+ + S
Sbjct: 194 ESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKS 253
Query: 182 SLLDMYAK--------------------------------CGNIRLARCIFDKMDLHDIV 209
+++DMYAK CG I +AR +F+ M D++
Sbjct: 254 AIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI 313
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SWTA+I G + G +A+ LF++ME G+KP+ V VAVL+AC+ G D ++
Sbjct: 314 SWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQY 373
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI----SNMHAG 308
++ + AAV D+ + G + A E NM G
Sbjct: 374 IENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTG 416
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 171/361 (47%), Gaps = 19/361 (5%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR---VEDSHRLFCLLPVKDAISWNSIIA 115
+G +IH I +GL + S LI+ ++ ++ S LF + + WN++I
Sbjct: 24 QGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIR 83
Query: 116 GCVQNGLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G ++ E + + M+ I P + +F ++ +CA L++L G ++H II++GF+
Sbjct: 84 GYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFE 143
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ ++L+ +Y+ GN+ LAR +FD+ + D+VS+ +I G A A+ LF +M
Sbjct: 144 SDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEM 203
Query: 235 EKDGVKPNSVAFVAVLTACS-----HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
+ G+ P+ FVA+ + CS + G A Y N + D I +A+ D+
Sbjct: 204 QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLK----SAIVDMY 259
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF-MIDPNNMGAY 348
+ G + A S M + W +++ C + E+ VA K+F + ++ ++
Sbjct: 260 AKCGLINIAERVFSTMGTSKSAAAWSSMV--CGYARCGEI--NVARKLFNHMHERDVISW 315
Query: 349 VILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN 408
+ + Y+ A + +A L M G+K + + V + A D YH+
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPDEV-TLVAVLSACARLGAFDLGKRLYHQYI 374
Query: 409 E 409
E
Sbjct: 375 E 375
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 309/517 (59%), Gaps = 6/517 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL +++ + G G ++E L+++R+ N + ++ T S L +F++ D+
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +R G +A V +LINMY KC +V + R+F ++ +I+ Q+
Sbjct: 257 LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQD 316
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F+E L F +M ++ P +F+ ++ + A L+ L G LHG ++++G+ +++ +
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG 376
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAK G+I AR F M DIV+W +I G + HG +A+ F++M G
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+ VL ACSH G +++ YFN + K + + P +HY + LL +AG ++A +
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED 496
Query: 301 FISNMHAGPTE---NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
F M P E W TLL+AC V +N L KVAE PN+ G YV+LSN +A
Sbjct: 497 F---MRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAK 553
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+R W+ A +R M N+G+KK P SWI ++N+ + F+A D HP I +KE++ +
Sbjct: 554 SREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSK 613
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
++ GY PD HDV+EEQ+++ L YHSE+LA+ +G+I TP+ + + + KN+R+C DC
Sbjct: 614 IKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDC 673
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+AIK ISKI +R I++RD++RFHHF DG+CSC DYW
Sbjct: 674 HSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 159/325 (48%), Gaps = 3/325 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSW ++ G +G E L + + M + +P+ F + V ++ + +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+ HG +++GL ++ + ++L+ MY+ C+ ++ R+ LP D ++S ++G ++
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G F EGL R+ ++++ S + ++L L+L Q+H ++R GF+ +
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA 274
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+L++MY KCG + A+ +FD +I T ++ + +A++LF +M+ V
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN F +L + + L+ K + + G A+ ++ ++G +++A
Sbjct: 335 PPNEYTFAILLNSIAELSLL-KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 300 EFISNMHAGPTENVWLTLLSACRVH 324
+ S M W T++S C H
Sbjct: 394 KAFSGMTFRDIV-TWNTMISGCSHH 417
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KI 138
+SLIN+Y KC + +LF L+P ++ +SW +++ G +G E LK F+ M + +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
+P + + +C++ + GKQ HGC ++ G + F+ ++L+ MY+ C A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+ D + D+ +++ + G G + + + + + N++ +++ L S+
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL--T 316
++ A + M + +G E A+ ++ G+ GK+ A + HA +N++L T
Sbjct: 253 LNLALQVHSRMVR-FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHA---QNIFLNTT 308
Query: 317 LLSACRVHKNVELAGKVAEKIFMID-PNNMGAYVILSNTYA 356
++ A K+ E A + K+ + P N + IL N+ A
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCII---RNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
+ ++ CA+ + L +G+ +H +I ++ ++ + +SL+++Y KC AR +FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLID 260
M ++VSW A++ G G + + LF+ M G +PN V +CS++G I+
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 261 KAWSYFNSMTKDYGI 275
+ + K YG+
Sbjct: 154 EGKQFHGCFLK-YGL 167
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 314/524 (59%), Gaps = 33/524 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
SD+V+W++VI G A+ G EA+++ RQM +P+ TL S+L A ++ GKE
Sbjct: 330 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 389
Query: 64 HGYAIRHGLDA-------NVCIGSSLINMYAKCARVEDSHRLFCLLPVKD--AISWNSII 114
H Y+++ L ++ + ++LI+MYAKC +E + +F + KD ++W +I
Sbjct: 390 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 449
Query: 115 AGCVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
G Q+G + L+ F +M I P + S ++ ACA L L GKQ+H ++R
Sbjct: 450 GGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRS 509
Query: 173 FDDN--MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
D+ +F+A+ L+DMY+K G++ A+ +FD M + VSWT+++ G +HG + DA +
Sbjct: 510 RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRV 569
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F++M K+ + + + F+ VL ACSH+G+ D+G+ P EHYA + DLLG
Sbjct: 570 FDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLG 616
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
RAG+L EA I++M PT VW+ LLSACR+H N ELA A+K+ + +N G Y +
Sbjct: 617 RAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTL 676
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YA ARRWKD A + M+ G+KK P SW++ + F GD++H +I E
Sbjct: 677 LSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYET 736
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L +L++R++ LHDV++E+K + L HSE+LA+ + I+ P G IRI KN
Sbjct: 737 LADLIKRIK-------ANFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKN 789
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LR+CGD H+AI +IS IV+ EII+RD+SRFH F++G CSC YW
Sbjct: 790 LRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 147/270 (54%), Gaps = 4/270 (1%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S + WN +I AL + R+M ++ PD +T V + + G I
Sbjct: 89 SSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASI 148
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF---CLLPVKDAISWNSIIAGCVQN 120
HG IR G ++NV + +++I+MY KC V + ++F C + D+++WNSI++
Sbjct: 149 HGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHC 208
Query: 121 GLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + + FR+M + I P V +I+P C +L G+Q+HG +R+G +++F+
Sbjct: 209 FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFV 268
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMYAKCG + A +F++M D+V+W A++ G + +G DA+SLF +M ++ +
Sbjct: 269 GNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKI 328
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+ + V + +V++ + G +A F M
Sbjct: 329 ESDVVTWSSVISGYAQRGFGCEAMDVFRQM 358
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 312/546 (57%), Gaps = 37/546 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P V + + I + GL+ AL ++ +M L P S TLSS LP + G+
Sbjct: 94 PDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHG---LALGR 150
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYA-------------------------------KCA 90
+H YA + L + + ++L+ MYA K
Sbjct: 151 ALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMG 210
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
++D+ LF +P KD I WN++I G Q+G +E L+ FR ML + + P V+ +
Sbjct: 211 ALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALS 270
Query: 151 ACAHLTTLHLGKQLHGCIIRNG--FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
A A L T G+ LH ++N N + ++L+DMY KCG++ A +F+ + DI
Sbjct: 271 AVAQLGTAESGRWLH-SYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDI 329
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
V W A+I G A+HG++ A+ +F Q+ G+ P + F+ +L ACSH+GL+D+ +F S
Sbjct: 330 VVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQS 389
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M ++Y I P EHY + DLLGRAG ++EA+ + +M P +W++LL+ACR+HKN+
Sbjct: 390 MEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMA 449
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
L ++A+ + N G Y++LSN YAA W++ A +R M+ G++K P CS IEV
Sbjct: 450 LGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVG 509
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
K Y FVAGD SHP I L+++ ++++G+VP T+ VLHD++E K+ L HSE
Sbjct: 510 RKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSE 569
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LA+ FG+I T G TI+I+KNLR C DCH +K ISKI R+I+ RD +RFHHF DG C
Sbjct: 570 KLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSC 629
Query: 509 SCGDYW 514
+CGDYW
Sbjct: 630 TCGDYW 635
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 34/275 (12%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+H A+R G+D + +G L YA R++ + L L P + + S I G
Sbjct: 53 ELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRG 112
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L L +ML + P + SS +PAC L LG+ LH + + ++A+
Sbjct: 113 LHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLA---LGRALHAYAFKLALAGDSYVAT 169
Query: 182 SLLDMYAKCGNIRLARCIFDKM-DLH------------------------------DIVS 210
+LL MYA+ G+ AR +FD+M D H D +
Sbjct: 170 ALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFIC 229
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W A+I G HG ++A+ LF M + GV P+ VA + L+A + G + + +
Sbjct: 230 WNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVK 289
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + A+ D+ + G L++A +++
Sbjct: 290 NSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI 324
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D + WN +I G ++G EAL + R M + PD + L A G
Sbjct: 222 MPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESG 281
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +H Y + N +G++LI+MY KC +ED+ +F + KD + WN++I G
Sbjct: 282 RWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAM 341
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L+ F Q+ + P ++F ++ AC+H + G Q
Sbjct: 342 HGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFF-------------- 387
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+ + YA I C+ D ++G A G +A L + M +
Sbjct: 388 -QSMEEEYAIVPKIEHYGCMVD-------------LLGRA--GLIEEAFHLVQSMT---I 428
Query: 240 KPNSVAFVAVLTAC 253
P++V +V++L AC
Sbjct: 429 APDTVMWVSLLAAC 442
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 312/546 (57%), Gaps = 37/546 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P V + + I + GL+ AL ++ +M L P S TLSS LP + G+
Sbjct: 93 PDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHG---LALGR 149
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYA-------------------------------KCA 90
+H YA + L + + ++L+ MYA K
Sbjct: 150 ALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMG 209
Query: 91 RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMP 150
++D+ LF +P KD I WN++I G Q+G +E L+ FR ML + + P V+ +
Sbjct: 210 ALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALS 269
Query: 151 ACAHLTTLHLGKQLHGCIIRNG--FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
A A L T G+ LH ++N N + ++L+DMY KCG++ A +F+ + DI
Sbjct: 270 AVAQLGTAESGRWLH-SYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDI 328
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
V W A+I G A+HG++ A+ +F Q+ G+ P + F+ +L ACSH+GL+D+ +F S
Sbjct: 329 VVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQS 388
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M ++Y I P EHY + DLLGRAG ++EA+ + +M P +W++LL+ACR+HKN+
Sbjct: 389 MEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMA 448
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
L ++A+ + N G Y++LSN YAA W++ A +R M+ G++K P CS IEV
Sbjct: 449 LGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVG 508
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
K Y FVAGD SHP I L+++ ++++G+VP T+ VLHD++E K+ L HSE
Sbjct: 509 RKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSE 568
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LA+ FG+I T G TI+I+KNLR C DCH +K ISKI R+I+ RD +RFHHF DG C
Sbjct: 569 KLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSC 628
Query: 509 SCGDYW 514
+CGDYW
Sbjct: 629 TCGDYW 634
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 34/275 (12%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+H A+R G+D + +G L YA R++ + L L P + + S I G
Sbjct: 52 ELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRG 111
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
L L +ML + P + SS +PAC L LG+ LH + + ++A+
Sbjct: 112 LHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLA---LGRALHAYAFKLALAGDSYVAT 168
Query: 182 SLLDMYAKCGNIRLARCIFDKM-DLH------------------------------DIVS 210
+LL MYA+ G+ AR +FD+M D H D +
Sbjct: 169 ALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFIC 228
Query: 211 WTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
W A+I G HG ++A+ LF M + GV P+ VA + L+A + G + + +
Sbjct: 229 WNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVK 288
Query: 271 KDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + A+ D+ + G L++A +++
Sbjct: 289 NSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI 323
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D + WN +I G ++G EAL + R M + PD + L A G
Sbjct: 221 MPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESG 280
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ +H Y + N +G++LI+MY KC +ED+ +F + KD + WN++I G
Sbjct: 281 RWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAM 340
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G + L+ F Q+ + P ++F ++ AC+H + G Q
Sbjct: 341 HGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFF-------------- 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+ + YA I C+ D ++G A G +A L + M +
Sbjct: 387 -QSMEEEYAIVPKIEHYGCMVD-------------LLGRA--GLIEEAFHLVQSMT---I 427
Query: 240 KPNSVAFVAVLTAC 253
P++V +V++L AC
Sbjct: 428 APDTVMWVSLLAAC 441
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 283/440 (64%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ + +++I+ Y++ RVED+ +F + KD + W+++I+G ++ E L F +M
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ IKP V+ S++ ACA L L K +H + +NG + + ++L+DMYAKCGN+
Sbjct: 73 VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLG 132
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
AR +F+KM +++SWT++I A+HG+A +A+ F QM+ + +KPN V FV VL ACS
Sbjct: 133 AARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACS 192
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVW 314
HAGL+++ F SMT ++ I P EHY + DL GRA L++A E + M P +W
Sbjct: 193 HAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIW 252
Query: 315 LTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNK 374
+L++AC++H EL A+++ ++P++ GA V LSN YA RRW+D LR M+ +
Sbjct: 253 GSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQR 312
Query: 375 GMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDV 434
G+ K CS IE+ N+ Y FV DK H +I E L E+++ ++ GY P+T+ VL DV
Sbjct: 313 GISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDV 372
Query: 435 EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIV 494
EEE KK ++ +HSE+LA+ +G++ G+ IRI+KNLRVC DCHT IK +SK+ EIIV
Sbjct: 373 EEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIV 432
Query: 495 RDNSRFHHFEDGKCSCGDYW 514
RD +RFHH++ G CSC DYW
Sbjct: 433 RDRTRFHHYKAGVCSCNDYW 452
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M DLV W+ +I G A + +EALN+ +M +KPD T+ SV+ A + +
Sbjct: 40 MEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRA 99
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y ++GL + + ++LI+MYAKC + + +F + ++ ISW S+I +
Sbjct: 100 KWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIH 159
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFI 179
G LKFF QM IKP V+F ++ AC+H + G++ + +
Sbjct: 160 GDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEH 219
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHG 222
++D++ + +R A + + M L ++V W +++ +HG
Sbjct: 220 YGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHG 263
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 37/171 (21%)
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD----------------- 237
+A+ +F K+ ++V TA+I G + G DA +F+QME+
Sbjct: 1 MAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDK 60
Query: 238 --------------GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYA 283
G+KP+ V ++V++AC+ G++D+A + + G+ +
Sbjct: 61 PQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRA-KWIHMYVDKNGLGGALPVNN 119
Query: 284 AVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGK 332
A+ D+ + G L A M + NV W ++++A +H + A K
Sbjct: 120 ALIDMYAKCGNLGAARGVFEKMQ---SRNVISWTSMINAFAIHGDASNALK 167
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 319/540 (59%), Gaps = 37/540 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
++ +I ARNG + ++ + M N N+ P SFT S+ +F+ + G ++H +A
Sbjct: 80 YSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSA---LFSLLKNPSLGSQLHLHAF 136
Query: 69 RHGLDANVCIGSSLINMYAK-----CARV---EDSHR----------------------- 97
G ++ +G+++I+MY K CAR E HR
Sbjct: 137 LFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACE 196
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
LF LPVKD ++W S++ G QN + + L+FFR+M A + ++ + ACA L
Sbjct: 197 LFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGV 256
Query: 158 LHLGKQLHGCI--IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
+ R G N+F+ S+L+DMY+KCGN+ A +F M ++ S++++I
Sbjct: 257 SGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMI 316
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+G A+HG A AI LF +M ++G+KPN V FV + TACSHAG++++ F +M + YG+
Sbjct: 317 VGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGV 376
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
+P+ +HYA +ADLLGRAG L++A + + M P VW LL A +H N ++A +
Sbjct: 377 SPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASR 436
Query: 336 KIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNK-AYAF 394
+F ++P+N+G Y++LS TYA A +W D + +R MR K ++K P CSW+E KN + F
Sbjct: 437 SLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEF 496
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVF 454
AGD HP + I +AL +LL+R++ GY P V +D+++E K+ LL HSE+LA+ +
Sbjct: 497 FAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAY 556
Query: 455 GIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
G++ T G+TI+I+KNLR+C DCH + SK+ R+IIVRDN RFHHF +G CSC ++W
Sbjct: 557 GLLSTDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 15/250 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD-----YV 55
+PV D+V+W +++ G ++N + ++AL R+M + D TL + A Y
Sbjct: 201 LPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYA 260
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D I +EI + R G +NV +GS+LI+MY+KC VE+++ +F + + S++S+I
Sbjct: 261 DWI--REI-AESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIV 317
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFD 174
G +G +K F +ML IKP HV+F + AC+H + G+QL G + G
Sbjct: 318 GFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVS 377
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA----IS 229
+ + D+ + G++ A + M + + W A++ + +HGN A S
Sbjct: 378 PTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRS 437
Query: 230 LFEQMEKDGV 239
LFE +E D +
Sbjct: 438 LFE-LEPDNL 446
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISWNSIIAG 116
K++H + R+ L + + ++L+ + H LF + + ++++I
Sbjct: 27 AKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRA 86
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+NG F ++ + ML + P +FS++ + L LG QLH GF ++
Sbjct: 87 YARNGPFHHSIRLYTSMLNNNVSPVSFTFSALF---SLLKNPSLGSQLHLHAFLFGFVND 143
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN------------- 223
+++ ++++ MY K G + AR +FD+M D+V+WT +I+ A G+
Sbjct: 144 LYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPV 203
Query: 224 ------------------AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WS 264
A+ F +M + GV + + V ++AC+ G+ A W
Sbjct: 204 KDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWI 263
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + +G + +A+ D+ + G ++EAY M
Sbjct: 264 REIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGM 304
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M++ +I R + + ++ +H TTL+ KQLH I RN + ++ ++LL +
Sbjct: 1 MVVGRI--RVLEWEAVRIIESHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPH 58
Query: 193 IRL---ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
I + +F ++ + ++A+I A +G H +I L+ M + V P S F A+
Sbjct: 59 IPVHTYPHLLFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSAL 118
Query: 250 LTACSHAGL 258
+ + L
Sbjct: 119 FSLLKNPSL 127
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 306/490 (62%), Gaps = 1/490 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW ++I G A+N + EA+ ++ M KP+ FT +S+L Y D G +IH
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIH 175
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ +V +GS+L++MYA+C +++ + +F L K+ +SWN++I+G + G +
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L F +M + H ++SSI A A + L GK +H +I++ F+ +++L
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTML 295
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAK G++ AR +F+++ D+V+W +++ A +G +A+S FE+M K G+ N +
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+F+ +LTACSH GL+ + YF+ M K+Y + P EHY V DLLGRAG L A FI
Sbjct: 356 SFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFK 414
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT VW LL+ACR+HKN ++ A+ +F +DP++ G V+L N YA+ W A
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAA 474
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R M+ G+KK PACSW+E++N + FVA D +HP I + E+ ++ +EGYV
Sbjct: 475 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYV 534
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PD VL V+E++++ L YHSE++A+ F +I P G TIRI+KN+R+CGDCH+A K+I
Sbjct: 535 PDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYI 594
Query: 485 SKIVQREIIV 494
SK+ +REI++
Sbjct: 595 SKVFEREIVI 604
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 128/237 (54%)
Query: 26 LNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINM 85
L+ + + + L P + + A ++ ++IH + + + +SLI++
Sbjct: 36 LHDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHL 95
Query: 86 YAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
Y KC V ++H++F + KD +SW S+IAG QN + E + ML + KP +F
Sbjct: 96 YCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S++ A +G Q+H ++ + +++++ S+LLDMYA+CG + +A +FDK+D
Sbjct: 156 ASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
+ VSW A+I G A G+ A+ +F +M+++G + + ++ +A + G +++
Sbjct: 216 KNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQG 272
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 313/515 (60%), Gaps = 11/515 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
M +D++SW +I G ++G+ E + ++ +M N ++KP+ T SS+L A+ D
Sbjct: 318 MRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDS 377
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+++H + I+ A +G++L++MYA+ +E++ R+F L + IS C+
Sbjct: 378 GRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS-------CIT 430
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G D L + I +F+S++ A A + L G+QLH ++ GF + F+
Sbjct: 431 EGR-DAPLDHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFV 487
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++SL+ MY++CG + A F+++ +++SWT++I G A HG A A+SLF M GV
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN V ++AVL+ACSH GL+ + YF SM +D+G+ P EHYA + DLL R+G ++EA
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEAL 607
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
EFI+ M VW TLL ACR H N+E+ A+ + ++P + YV+LSN YA A
Sbjct: 608 EFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAG 667
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W + A +R MR+ + K SW+EV+N + F AGD SHP I L L+ ++
Sbjct: 668 LWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIK 727
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT VLHD+ +E K+ L HSE++A+ FG+I T IRI KNLRVC DCH+
Sbjct: 728 GMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHS 787
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK++SK +REII+RD++RFH +DG+CSCG+YW
Sbjct: 788 AIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 140/260 (53%), Gaps = 8/260 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIKGK 61
+ D+VSW + LARNG E+L ++ +M L P+++TL +V F + + G
Sbjct: 113 LRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGG 172
Query: 62 EIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ G + GL ++ +GS+LI+M A+ + + ++F L K + W +I+ VQ
Sbjct: 173 VVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQG 232
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E ++ F L +P + SS++ AC L ++ LG QLH +R GF + ++
Sbjct: 233 ECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVS 292
Query: 181 SSLLDMYAKCGNIR----LARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQME 235
L+DMYAK NI A +F++M +D++SWTA+I G G + + LF +M
Sbjct: 293 CGLVDMYAK-SNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEML 351
Query: 236 KDGVKPNSVAFVAVLTACSH 255
+ +KPN + + ++L AC++
Sbjct: 352 NESIKPNHITYSSILKACAN 371
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 56 DVIKGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSI 113
D+ G+ +H +R L D + + +SL+ +Y++C V + +F + ++D +SW ++
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNG 172
+ +NG E L +ML + + P + ++ AC H +G + G + + G
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 173 F-DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
++ + S+L+DM A+ G++ AR +FD + +V WT +I A +A+ +F
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLI 259
+DG +P+ ++++AC+ G +
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSV 270
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 318/580 (54%), Gaps = 70/580 (12%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN ++ G +G EE LNI+++M KP+S +++SVL ++ + GKE H
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 393
Query: 65 GYAIRHGLDA-------------------------------NVCIGSSLINMYAKCARVE 93
GY +R+G D N+ +SL++ Y+ E
Sbjct: 394 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 453
Query: 94 DSHRLF---------------------------------------CLLPVKDAISWNSII 114
D+ RL L + +SW ++I
Sbjct: 454 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALI 513
Query: 115 AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+G Q G + LKFF QM + P S + ++ ACA L+ L GK++H IRNGF
Sbjct: 514 SGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFI 573
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+++F+A++L+DMY+K +++ A +F ++ + SW +IMG A+ G +AIS+F +M
Sbjct: 574 EDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEM 633
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+K GV P+++ F A+L+AC ++GLI + W YF+SM DY I P EHY + DLLGRAG
Sbjct: 634 QKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGY 693
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNT 354
L EA++ I M P +W LL +CR+HKN++ A A+ +F ++PNN Y+++ N
Sbjct: 694 LDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNL 753
Query: 355 YAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL 414
Y+ RW+D LR M G++ SWI++ + + F + +K HP +I L +L
Sbjct: 754 YSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQL 813
Query: 415 LERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
+ M++ GYVPD V +++E +K+ +L H+E+LAI +G+I G IR+IKN R+C
Sbjct: 814 VSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRIC 873
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH+A K+IS + RE+ +RD RFHHF +GKCSC D+W
Sbjct: 874 SDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 180/359 (50%), Gaps = 39/359 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + + WN I+ ++ ++ + + R+M LK ++ T+ VL +
Sbjct: 194 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAA 253
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG---- 116
K+IHGY R GLD++V + + LI+MY+K ++E + R+F + ++ SWNS+I+
Sbjct: 254 KQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAAL 313
Query: 117 --------------------------CVQNGLF-----DEGLKFFRQMLIAKIKPRHVSF 145
C+ +G F +E L ++M KP S
Sbjct: 314 GFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSM 373
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
+S++ A + L L++GK+ HG ++RNGFD ++++ +SL+DMY K ++ A+ +FD M
Sbjct: 374 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN 433
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+I +W +++ G + G DA+ L QMEK+G+KP+ V + +++ + G +A +
Sbjct: 434 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAV 493
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAG---PTENVWLTLLSAC 321
+ TK G+ P+ + A+ +AG +++ +F + M P LL AC
Sbjct: 494 LHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRAC 551
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 5 DLVSWNTVIVGLARN-GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+ + WN+ + + G L + +++ + DS S L +D+ G EI
Sbjct: 96 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 155
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG I+ G D +V + +L+N Y +C +E ++++F +P +A+ WN I +Q+
Sbjct: 156 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL 215
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+G++ FR+M + +K + ++ AC + L+ KQ+HG + R G D ++ + + L
Sbjct: 216 QKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 275
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY+K G + LAR +FD M+ + SW ++I A G +DA SLF ++E +KP+
Sbjct: 276 ISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDI 335
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
V + +L+ G ++ + M + G P+ +V + G L E
Sbjct: 336 VTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKE 391
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/468 (41%), Positives = 290/468 (61%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D ++W T++ GL +NGL EAL++ R+M + D +T S+L + +GK+IH
Sbjct: 242 DSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIH 301
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
Y R + NV +GS+L++MY+KC + + +F + ++ ISW ++I G QN +
Sbjct: 302 AYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ F +M + IKP + S++ +CA+L +L G Q H + +G + ++++L+
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALV 421
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I A +FD+M HD VSWTA++ G A G A + I LFE+M +G+KP+ V
Sbjct: 422 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGV 481
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACS AGL++K YF+SM KD+GI P +HY + DL R+G+ +EA EFI
Sbjct: 482 TFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQ 541
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLS+CR+ N+E+ AE + DP N +YV+L + +AA +W +
Sbjct: 542 MPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEV 601
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR++ +KK P CSWI+ KNK + F A D+SHPF RI E L+ L +M +EGY
Sbjct: 602 AHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYK 661
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
PD VLHDV + K +++ +HSE+LAI FG+I P IRI+KNLR
Sbjct: 662 PDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 174/337 (51%), Gaps = 33/337 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D VS+N +I G + G ++ + R + +++P TLS+++ + + D
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRAL 164
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
G +H +R G A +GS L++MYAK
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +ED+ LF L+ +D+I+W +++ G QNGL E L FR+M + +F SI
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ AC L L GKQ+H I R ++DN+F+ S+L+DMY+KC +IRLA +F +M +I
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
+SWTA+I+G + + +A+ F +M+ DG+KP+ +V+++C++ +++ + F+
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG-AQFHC 403
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ G+ A+ L G+ G +++A+ M
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 14/231 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +IVG +N EEA+ +M +KPD FTL SV+ A+ + +G
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ H A+ GL + + ++L+ +Y KC +ED+HRLF + D +SW +++ G Q
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF 458
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-------KQLHGCIIRNGF 173
G E + F +ML +KP V+F ++ AC+ + G ++ HG +
Sbjct: 459 GKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV---PI 515
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
DD+ + ++D+Y++ G + A +M D W ++ L GN
Sbjct: 516 DDHY---TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P +F L+ +L +A + + + + D N+ ++L++ A V D RL
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRV----FDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTT 157
F +P +DA+S+N++I G G ++ +R +L + ++P ++ S+++ + L+
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
LG +H ++R GF F+ S L+DMYAK G IR AR +F +M+ +V + +I G
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
DA LF+ M V +S+ + ++T + GL +A F M + G+
Sbjct: 222 LLRCKMIEDAKGLFQLM----VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE-GVGI 276
Query: 278 SFEHYAAVADLLGRAGKLQEAYE 300
+ ++ G L+E +
Sbjct: 277 DQYTFGSILTACGALAALEEGKQ 299
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 313/523 (59%), Gaps = 15/523 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG------------NVNLKPDSFTLSSVLPIFA 52
++VS+N +I G ++GL EAL + R M N++++P+ T++ LP A
Sbjct: 180 NVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACA 239
Query: 53 DYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D +GKEIHGY +R+G + N+ + S+L++MYAKC ++ ++++F + ++ +SWN+
Sbjct: 240 DLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNA 299
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++AG + N +E LK F +ML ++P ++F + PAC + + G+ LHG +
Sbjct: 300 LMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQ 359
Query: 173 FDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
D+ IAS+L+DMYAKCG+I A+ +FD D+ W A+I ++HG A +A ++F
Sbjct: 360 LDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVF 419
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
QME G+ P+ + FV++L+AC+ GL+++ W YFNSM YG+A + EHY + +LG
Sbjct: 420 VQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGG 479
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG L EA +FI M P +W TLL ACRVH N E+ + A+ +F ++P+N Y++L
Sbjct: 480 AGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLL 539
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN Y ++ W A +LR FMR + + CS++ V + F G+ SHP I EA
Sbjct: 540 SNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESSHPELEEILEAW 599
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
+L +ME GY P + + D EE++ H+E+LAI FGII + + + KN+
Sbjct: 600 DKLARKMELSGYFP--LDPVFDDEEKELDPFSCLHTEKLAICFGIISSNTYRPVHVSKNI 657
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R+C DCHT+ K ISKI REI V+D +HH +DG CSC D W
Sbjct: 658 RMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICSCQDRW 700
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
SWN II+GCVQNG ++ L F +ML P ++ +SI+PAC L L LGK +H
Sbjct: 12 SWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHAIA 71
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+++G N+++ S++DMY+KCG+ A +F K + + W +I G DA+
Sbjct: 72 LKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDAL 131
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
L M+KDG KP+ + + +L+ + GL +A+ + M + G+ P+ + +
Sbjct: 132 GLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQ-MGLKPNVVSFNVLISG 190
Query: 289 LGRAGKLQEAYEFISNMHA 307
++G EA + M +
Sbjct: 191 FQQSGLSYEALKVFRIMQS 209
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 47/339 (13%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G +NG E+AL++ +M P+ T++S+LP + GK IH A
Sbjct: 12 SWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHAIA 71
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++HG+ NV + S+I+MY+KC + + ++F K+ WN +IA V G ++ L
Sbjct: 72 LKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDAL 131
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF-IASSLLDM 186
R M KP +++++I+ A RNG F + S ++ M
Sbjct: 132 GLLRSMQKDGWKPDVITYNTILSGHA----------------RNGLKTQAFELLSEMVQM 175
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KDG------ 238
K ++VS+ +I G G +++A+ +F M+ DG
Sbjct: 176 GLK----------------PNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEV 219
Query: 239 ----VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
++PN + L AC+ L + + T G P+ +A+ D+ +
Sbjct: 220 LNLSMRPNPITITGALPACADLNLWCQG-KEIHGYTLRNGFEPNIFVSSALVDMYAKCHD 278
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ A + + T + W L++ +K E A K+
Sbjct: 279 MDSANKVFFRIDGRNTVS-WNALMAGYIYNKQPEEALKL 316
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/519 (40%), Positives = 315/519 (60%), Gaps = 5/519 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +++ G G AL + QM + P+ FT ++++ + ++ G
Sbjct: 85 MPHRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIG 144
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH GL +N+ SSLI+MY KC V+++ +F + ++ +SW S+I QN
Sbjct: 145 RRIHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQN 204
Query: 121 GLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
L+ F++ +++ KP H S + ACA L +L GK HG +IR G + + I
Sbjct: 205 AQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVI 264
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+DMYAKCG + + IF ++ ++ +T++I+G A +G ++ LF++M +
Sbjct: 265 ASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRI 324
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN + FV VL ACSH+GL+DK +SM YG+ P +HY +AD+LGR G+++EAY
Sbjct: 325 KPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAY 384
Query: 300 EFISNMH--AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
+ ++ +W TLLSA R++ V++A + + ++ + GAYV LSN YA
Sbjct: 385 QLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYAL 444
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHR-INEALKELLE 416
A W++A +LR M++ G+ K P SWIE+K Y F AGD S R I L+EL E
Sbjct: 445 AGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELEE 504
Query: 417 RMEQEGYVPDTKE-VLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
RM+ GYV TK V DVEEE K+ ++ HSE+LA+ FG+I TP G TIRI+KNLR+C
Sbjct: 505 RMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMKNLRMCR 564
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A K IS IV+RE++VRD +RFHHF++G C+CGD+W
Sbjct: 565 DCHGAFKLISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 1/203 (0%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D+ H ++ GL + + LIN Y + ++ + +LF +P ++ +SW S++A
Sbjct: 39 DLTSATSTHSNVVKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDEMPHRNVVSWTSLMA 98
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G V G + L F QM + P +F++++ AC+ L L +G+++H + +G
Sbjct: 99 GYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSGLGS 158
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N+ SSL+DMY KC ++ AR IFD M ++VSWT++I + + H A+ LF++
Sbjct: 159 NLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFN 218
Query: 236 KDGV-KPNSVAFVAVLTACSHAG 257
+ KPN + ++AC+ G
Sbjct: 219 HSRLDKPNHFMLCSAVSACASLG 241
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 316/541 (58%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LV +NT++ ++GL E L ++ +M +PD T+ S + A D+ GK H
Sbjct: 288 NLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSH 347
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG--- 121
Y R+GL+ I +++I+MY KC + E + ++F + K ++WNS+IAG V++G
Sbjct: 348 AYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELE 407
Query: 122 ----------------------------LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+F+E + R+M IK V+ I AC
Sbjct: 408 LALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACG 467
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+L L L K ++ I +N +M + ++L+DM+++CG+ A +F+ M+ D+ +WTA
Sbjct: 468 YLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTA 527
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
I A+ GNA AI LF++M K VK + FVA+LTA SH G +D+ F +M K +
Sbjct: 528 AIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIH 587
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G++P HY + DLLGRAG L+EA++ + +M P + +W + L+ACR HKNVE A
Sbjct: 588 GVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYA 647
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
EKI + P +G +V+LSN YA+A +W D A +R+ M+ KG +K S IEV
Sbjct: 648 DEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIRE 707
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F +GD+SH +I L+E+ R+ Q GYVPDT VL DV+E++K++LL HSE+LA+
Sbjct: 708 FTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMA 767
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+G+I T G IR++KNLR+C DCH+ K +SK+ REI VRDN+R+H F++G CSC D+
Sbjct: 768 YGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDF 827
Query: 514 W 514
W
Sbjct: 828 W 828
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 192/378 (50%), Gaps = 16/378 (4%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
L + NT+I G A +GL +EA+ I M V + PD+FT +L + + +G ++H
Sbjct: 86 LYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVH 145
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ GL ++ + +SLI+ YA C +V+ ++F + ++ +SW S+I G +
Sbjct: 146 GVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAK 205
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E + F +M+ ++P V+ + ACA L L LGK++ + G N + ++LL
Sbjct: 206 EAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALL 265
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY KCG++ R IFD+ ++V + ++ HG A + + + ++M + G +P+ V
Sbjct: 266 DMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKV 325
Query: 245 AFVAVLTACSHAGLI-----DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
++ + AC+ G + A+ + N + + I+ A+ D+ + GK + A
Sbjct: 326 TMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISN------AIIDMYMKCGKREAAC 379
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ +M + T W +L++ +ELA ++ + + +N+ ++ + A
Sbjct: 380 KVFDSM-SNKTVVTWNSLIAGLVRDGELELALRIFGE---MPESNLVSWNTMIGAMVQAS 435
Query: 360 RWKDAASLRVFMRNKGMK 377
+++A L M+N+G+K
Sbjct: 436 MFEEAIDLLREMQNQGIK 453
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSW ++I G + + +EA+ + +M V ++P+ T+ + A D+ GK++
Sbjct: 187 NVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVC 246
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G+ +N + ++L++MY KC + +F K+ + +N+I++ VQ+GL
Sbjct: 247 NLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG 306
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L +ML +P V+ S + ACA L L +GK H + RNG + I+++++
Sbjct: 307 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 366
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-------------------- 224
DMY KCG A +FD M +V+W ++I G G
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
Query: 225 -----------HDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKD 272
+AI L +M+ G+K + V V + +AC + G +D A W Y D
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
I + A+ D+ R G A NM
Sbjct: 487 IHI--DMQLGTALVDMFSRCGDPLNAMRVFENME 518
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP S+LVSWNT+I + + ++EEA++++R+M N +K D T+ + +
Sbjct: 416 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA 475
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I+ Y ++ + ++ +G++L++M+++C ++ R+F + +D +W + I
Sbjct: 476 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 535
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G ++ F +ML +K F +++ A +H + G+QL + + +G +
Sbjct: 536 GNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVH 595
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDA 227
++D+ + G + A + M + +D++ W + + H N A
Sbjct: 596 YGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVI-WGSFLAACRKHKNVEFA 644
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 276/439 (62%), Gaps = 1/439 (0%)
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
VC+ ++++ A + + LF +P +D ++WN++IAG V G E L+ F +M
Sbjct: 262 VCV-TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 320
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A V+ S + ACA L L GK +H C G ++ + ++L+DMY+KCG +
Sbjct: 321 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 380
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +FD M ++ +WT+ + G A++G D ++LF++ME GV+PN V FV VL CS
Sbjct: 381 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 440
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL 315
AGL+D+ + F+SM ++GI P EHY + DL GRAG+L +A FI+ M P E VW
Sbjct: 441 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 500
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
LL+A R+HKNVEL +K+ I+ N A+V+LSN YA ++ WK +++R M+ KG
Sbjct: 501 ALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 560
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE 435
+KK P CS IEV K + F G K+HP + I L E+ +R+ +GY+ +TKEVL D+E
Sbjct: 561 VKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIE 620
Query: 436 EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVR 495
EE K++ + HSE+LAI FG++ P+ IRI+KNLRVC DCH K ISK+ REI++R
Sbjct: 621 EEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMR 680
Query: 496 DNSRFHHFEDGKCSCGDYW 514
D +RFHHF+DG CSC DYW
Sbjct: 681 DRNRFHHFKDGACSCKDYW 699
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+WN +I G G EAL + +M + TL S L A + +G
Sbjct: 287 MPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERG 346
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H A G+ +V +G++LI+MY+KC V + +F + ++ +W S ++G N
Sbjct: 347 KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMN 406
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + L F++M ++P V+F ++ C+ + G+ + N G D +
Sbjct: 407 GMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEH 466
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGN 223
++D+Y + G + A + M L H+ V W A++ + +H N
Sbjct: 467 YGCMVDLYGRAGRLDDAVNFINGMPLEPHEGV-WGALLNASRIHKN 511
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL--------------------------- 195
+H +R+G + + S + MYA G++
Sbjct: 216 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 275
Query: 196 ----ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +FD M D V+W A+I G G + +A+ LF++M G V V+ LT
Sbjct: 276 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALT 335
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
AC+ G +++ + +S G+ S A+ D+ + G + A E +M
Sbjct: 336 ACAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSM 388
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 276/439 (62%), Gaps = 1/439 (0%)
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
VC+ ++++ A + + LF +P +D ++WN++IAG V G E L+ F +M
Sbjct: 269 VCV-TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A V+ S + ACA L L GK +H C G ++ + ++L+DMY+KCG +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +FD M ++ +WT+ + G A++G D ++LF++ME GV+PN V FV VL CS
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 447
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL 315
AGL+D+ + F+SM ++GI P EHY + DL GRAG+L +A FI+ M P E VW
Sbjct: 448 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 507
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
LL+A R+HKNVEL +K+ I+ N A+V+LSN YA ++ WK +++R M+ KG
Sbjct: 508 ALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 567
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE 435
+KK P CS IEV K + F G K+HP + I L E+ +R+ +GY+ +TKEVL D+E
Sbjct: 568 VKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIE 627
Query: 436 EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVR 495
EE K++ + HSE+LAI FG++ P+ IRI+KNLRVC DCH K ISK+ REI++R
Sbjct: 628 EEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMR 687
Query: 496 DNSRFHHFEDGKCSCGDYW 514
D +RFHHF+DG CSC DYW
Sbjct: 688 DRNRFHHFKDGACSCKDYW 706
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+WN +I G G EAL + +M + TL S L A + +G
Sbjct: 294 MPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERG 353
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H A G+ +V +G++LI+MY+KC V + +F + ++ +W S ++G N
Sbjct: 354 KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMN 413
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + L F++M ++P V+F ++ C+ + G+ + N G D +
Sbjct: 414 GMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEH 473
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGN 223
++D+Y + G + A + M L H+ V W A++ + +H N
Sbjct: 474 YGCMVDLYGRAGRLDDAVNFINGMPLEPHEGV-WGALLNASRIHKN 518
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL--------------------------- 195
+H +R+G + + S + MYA G++
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 282
Query: 196 ----ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +FD M D V+W A+I G G + +A+ LF++M G V V+ LT
Sbjct: 283 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALT 342
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
AC+ G +++ + +S G+ S A+ D+ + G + A E +M
Sbjct: 343 ACAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSM 395
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 305/505 (60%), Gaps = 7/505 (1%)
Query: 14 VGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLD 73
+G ++NG EAL + +M ++P +F S+ L AD ++ G+ +H ++
Sbjct: 3 IGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEG 62
Query: 74 ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM 133
+ + + L+ +Y +C + ++F +P ++ SWNS+I+G V+ E L FR+M
Sbjct: 63 PDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRM 122
Query: 134 LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ V+ ++I+P CA +T L GK++H I+++ ++ + +SL+DMY KCG +
Sbjct: 123 QREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVV 182
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
R +FD M D+ SW ++ G A++G A+ LF +M G++P+ V F+A+L+ C
Sbjct: 183 DYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGC 242
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
SHAGL + F+ M D+G++PS EHYA + D+LGRAG++ A + NM + ++
Sbjct: 243 SHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSI 302
Query: 314 WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRN 373
W +LL++CR+H V LA +A ++F ++P N G YV+LSN YA A W +R M+
Sbjct: 303 WGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQT 362
Query: 374 KGMKKTPACSWIEVKNKAYAFVAGD----KSHPFYHRINEALKELLERMEQEGYVPDTKE 429
+ ++K CSWI+VKNK ++FVAG ++ Y +I L+E ME+ GY+P+T
Sbjct: 363 RRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREA---MEEFGYIPNTDV 419
Query: 430 VLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQ 489
VLHDV EE K + HSERLA VF +I T G IRI KNLRVC DCH+ IK +S++
Sbjct: 420 VLHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTG 479
Query: 490 REIIVRDNSRFHHFEDGKCSCGDYW 514
R I++RD +RFHHF++G CSC DYW
Sbjct: 480 RVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ SWN++I G + EAL++ R+M + TL+++LPI A ++ G
Sbjct: 91 MPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSG 150
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIH ++ +V + +SL++MY KC V+ RLF + KD SWN+++ G N
Sbjct: 151 KEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAIN 210
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL-HGCIIRNGFDDNMFI 179
G + F +M I+P V+F +++ C+H G++L H + G ++
Sbjct: 211 GYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEH 270
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQM-EKD 237
+ L+DM + G I A + M + S W +++ LH A ++ ++ E +
Sbjct: 271 YACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELE 330
Query: 238 GVKPNSVAFVAVLTACSHAGLID 260
P + ++ + A +AG+ D
Sbjct: 331 PYNPGNYVMLSNIYA--NAGMWD 351
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 307/514 (59%), Gaps = 6/514 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+++I A++G + A+ ++ M ++P++ T +VL GKEIH
Sbjct: 284 DIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIH 343
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ G +VC+ S+L+ MY VE + +F +D +SW+S+IAG QN
Sbjct: 344 ARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPA 403
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M + ++P V+F S + ACA + L G QLH + G D ++ +A++L+
Sbjct: 404 RALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALV 463
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
++Y KCG + A +F M ++++WT++ M +G+ ++ L ME G+KP+ +
Sbjct: 464 NLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGI 523
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
FVA+L +C++AG + K Y+N MT+D+GIAP+ EH + D+LGRAGKL+ A + I+
Sbjct: 524 VFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINT 583
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + W+ LL+AC+ H + A + AEKIF ++P N YV+LS+ + AA W+ A
Sbjct: 584 MKF-ESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAA 642
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINE---ALKELLERMEQE 421
R M +G+++ S IE+ ++ + FVA P +H + E AL++L M+
Sbjct: 643 EETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLP-HHLVGEIFAALEKLGREMQGA 701
Query: 422 GYVPDTKEV-LHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPD V L DVEE K+N + YHSE LA+ GII TP GT +RI KNLR+C DCH A
Sbjct: 702 GYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIA 761
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+V R I VRD R HHFE+G CSCGDYW
Sbjct: 762 TKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 166/295 (56%), Gaps = 2/295 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++ SW +I A+NG E L ++ +M +KPD +T ++VL + + K +H
Sbjct: 182 NVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILH 241
Query: 65 GYAIRH-GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
I GLD + +G++LIN+Y KC +E++ +F + KD +SW+S+IA Q+G
Sbjct: 242 AATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQA 301
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ M + ++P +V+F +++ A L GK++H I++ G+ D++ + S+L
Sbjct: 302 KSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSAL 361
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY G + AR IF+ D+VSW+++I G + + + A+SLF +ME DGV+PNS
Sbjct: 362 VKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNS 421
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V FV+ + AC+ G + + + + + G+ A+ +L G+ G+L+EA
Sbjct: 422 VTFVSAIDACAGVGALRRG-TQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 140/256 (54%), Gaps = 2/256 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV-DVIK 59
M ++V+W ++I G + +A+ + R+M + PD T +S+L ++ ++ +
Sbjct: 76 MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK +H + ++ G + + + + ++ MY KC VE + +F + + SW IIA Q
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
NG E L+ +M A +KP +F++++ AC + L K LH I + G D +
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+++Y KCG + A +F ++D DIVSW+++I A G A AI L M+ +G
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315
Query: 239 VKPNSVAFVAVLTACS 254
V+PN+V FV VL A +
Sbjct: 316 VRPNNVTFVNVLEAVT 331
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 136/261 (52%), Gaps = 6/261 (2%)
Query: 45 SSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSL-----INMYAKCARVEDSHRLF 99
+++L +D + +GK +HG +R L + SL I MY +C + + +F
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA-CAHLTTL 158
+ ++ ++W S+I+ G F + + FR+ML++ + P ++F+SI+ L
Sbjct: 74 DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
GK++H I++ G++ + + + +++MY KCG++ A +FD + ++ SWT +I
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
A +G+ + + L +M + GVKP+ F VL AC+ G +++A + G+
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253
Query: 279 FEHYAAVADLLGRAGKLQEAY 299
A+ +L G+ G L+EA+
Sbjct: 254 AAVGTALINLYGKCGALEEAF 274
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/506 (41%), Positives = 307/506 (60%), Gaps = 5/506 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM---GNVNLKPDSFTLSSVLPIFADYVDV 57
MP + V+W+ +I G +A + + M G L P S ++S L A +
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHL 241
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+++H + G+ A++ G+SL++MYAK ++ + LF + VKD +S++++++G
Sbjct: 242 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 301
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQNG +E F++M ++P + S++PAC+HL L G+ HG +I G
Sbjct: 302 VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 361
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
I ++L+DMYAKCG I L+R +F+ M DIVSW +I G +HG +A +LF +M
Sbjct: 362 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 421
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G P+ V F+ +L+ACSH+GL+ + +F+ M YG+ P EHY + DLL R G L E
Sbjct: 422 GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 481
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
AYEFI +M VW+ LL ACRV+KN++L KV+ I + P G +V+LSN Y+A
Sbjct: 482 AYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
A R+ +AA +R+ + +G KK+P CSWIE+ +AFV GD+SHP I L +L
Sbjct: 542 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVG 601
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+++ GY PDT VL D+EEE+K+ L HSE+LAI +GI+ + TI + KNLRVCGDC
Sbjct: 602 IKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDC 661
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHF 503
HT IK IS + +R IIVRD +RFHHF
Sbjct: 662 HTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 194/363 (53%), Gaps = 28/363 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALN--IVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
MP DLV+WN ++ G A +G+Y A+ + QM L+P++ TL ++LP+ A +
Sbjct: 71 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 59 KGKEIHGYAIRHGLDAN----------VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAI 108
+G +H Y IR L N V +G++L++MYAKC + + R+F +P ++ +
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 190
Query: 109 SWNSIIAGCVQNGLFDEGLKFFRQML---IAKIKPRHVSFSSIMPACAHLTTLHLGKQLH 165
+W+++I G V + F+ ML + + P S +S + ACA L L +G+QLH
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLH 248
Query: 166 GCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
+ ++G ++ +SLL MYAK G I A +FD+M + D VS++A++ G +G A
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+A +F++M+ V+P++ V+++ ACSH + S+ G+A A+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNAL 367
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFMIDPN 343
D+ + G++ + + + M P+ ++ W T+++ +H GK A +F+ + N
Sbjct: 368 IDMYAKCGRIDLSRQVFNMM---PSRDIVSWNTMIAGYGIHG----LGKEATALFL-EMN 419
Query: 344 NMG 346
N+G
Sbjct: 420 NLG 422
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 60/338 (17%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
+ P+++T L + D G+ IH +AI GL A++ + ++L++MY KCA + D+
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFF--RQMLIAKIKPRHVSFSSIMPACAH 154
+F +P +D ++WN+++AG +G++ + QM + +++P + +++P A
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 155 LTTLHLGKQLHGCIIR----------NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
L G +H IR + D + + ++LLDMYAKCG++ AR +FD M
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG---VKPNSVAFVAVLTAC-------- 253
+ V+W+A+I G L A LF+ M G + P S+A + L AC
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRM 243
Query: 254 ---------------------------SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA 286
+ AGLID+A + F+ M ++ Y+A+
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALV 298
Query: 287 DLLGRAGKLQEAYEFISNMHA---GPTENVWLTLLSAC 321
+ G+ +EA+ M A P ++L+ AC
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
ML ++ P + +F + AC+ L H G+ +H I G ++F++++LLDMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS--LFEQMEKDGVKPNSVAFVAVL 250
+ A IF M D+V+W A++ G A HG H A++ L QM+ ++PN+ VA+L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 251 TACSHAGLIDKAWS 264
+ G + + S
Sbjct: 121 PLLAQQGALAQGTS 134
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 276/439 (62%), Gaps = 1/439 (0%)
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
VC+ ++++ A + + LF +P +D ++WN++IAG V G E L+ F +M
Sbjct: 269 VCV-TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
A V+ S + ACA L L GK +H C G ++ + ++L+DMY+KCG +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +FD M ++ +WT+ + G A++G D ++LF++ME GV+PN V FV VL CS
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 447
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL 315
AGL+D+ + F+SM ++GI P EHY + DL GRAG+L +A FI+ M P E VW
Sbjct: 448 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 507
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
LL+A R+HKNVEL +K+ I+ N A+V+LSN YA ++ WK +++R M+ KG
Sbjct: 508 ALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 567
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE 435
+KK P CS IEV K + F G K+HP + I L E+ +R+ +GY+ +TKEVL D+E
Sbjct: 568 VKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIE 627
Query: 436 EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVR 495
EE K++ + HSE+LAI FG++ P+ IRI+KNLRVC DCH K ISK+ REI++R
Sbjct: 628 EEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMR 687
Query: 496 DNSRFHHFEDGKCSCGDYW 514
D +RFHHF+DG CSC DYW
Sbjct: 688 DRNRFHHFKDGACSCKDYW 706
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+WN +I G G EAL + +M + TL S L A + +G
Sbjct: 294 MPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERG 353
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H A G+ +V +G++LI+MY+KC V + +F + ++ +W S ++G N
Sbjct: 354 KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMN 413
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + L F++M ++P V+F ++ C+ + G+ + N G D +
Sbjct: 414 GMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEH 473
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGN 223
++D+Y + G + A + M L H+ V W A++ + +H N
Sbjct: 474 YGCMVDLYGRAGRLDDAVNFINGMPLEPHEGV-WGALLNASRIHKN 518
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL--------------------------- 195
+H +R+G + + S + MYA G++
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 282
Query: 196 ----ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
AR +FD M D V+W A+I G G + +A+ LF++M G V V+ LT
Sbjct: 283 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALT 342
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
AC+ G +++ + +S G+ S A+ D+ + G + A E +M
Sbjct: 343 ACAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSM 395
>gi|357452657|ref|XP_003596605.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485653|gb|AES66856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/512 (40%), Positives = 309/512 (60%), Gaps = 61/512 (11%)
Query: 24 EALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLI 83
+ LN+ +MG +K D T+SS+LP AD D+ GK IHG+A+R+G+ NV + ++L+
Sbjct: 145 KGLNVFHEMGWNGVKLDPVTVSSILPACADLKDLKSGKAIHGFAVRNGMVENVFVCNALV 204
Query: 84 NMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQM---------- 133
N+YAKC V ++H +F L+P +D +SW+ ++ N +++GL F QM
Sbjct: 205 NLYAKCLCVREAHAIFDLMPHRDVVSWSGVLTY-FTNKEYEKGLSLFSQMCRDGVETNEV 263
Query: 134 ------LIAKI-----KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
++ K+ KP ++ SSI+ AC +L + K++H + R
Sbjct: 264 TWKAMEMLRKMQNMGFKPNEITISSILQACYLSESLRMCKEIHYYVFR------------ 311
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+ K N+ FD + + D+V+WT +I NA+HGN +A+ LFE+M VKP+
Sbjct: 312 ----HWKVWNV------FDMIAIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPD 361
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
SV F+ VL++CSH+ L+++ FNSM+KD+ + P+ HY+ V D+ RAG+L EAYEFI
Sbjct: 362 SVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEAYEFI 421
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
M GPT W +LL+ CRV+KNVELA A+K+F I+P+ YV L N A+ W
Sbjct: 422 QRMPMGPTAGAWKSLLAGCRVYKNVELAKISAKKLFEIEPSRSRDYVALCNILVTAKLWS 481
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+A+ +R+FM+ G+ KTP CSW+ V N+ + FVAGDKS+ ME E
Sbjct: 482 EASKIRMFMKESGITKTPGCSWLHVGNRVHNFVAGDKSN----------------MENEN 525
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
+ DT VLHD+++E+K L HSE+LA+ FGI+ +TIR+ KNLR+CGDCH AIK
Sbjct: 526 -LGDTDNVLHDIDQEEKVESLCKHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIK 584
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+++K+V I+VRD+ RFHHF++G CSC D W
Sbjct: 585 YMAKVVDVMIVVRDSFRFHHFKNGNCSCNDLW 616
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 175/357 (49%), Gaps = 27/357 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D + +T+I L +GL EA+NI + +K D +V A D +
Sbjct: 38 IPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLDIPVFMAVAKACAASRDALNV 97
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KE+H A R G NV +G++LI+ Y KC VE R+F + V+D
Sbjct: 98 KELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFDDMVVRDV------------- 144
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+GL F +M +K V+ SSI+PACA L L GK +HG +RNG +N+F+
Sbjct: 145 ----KGLNVFHEMGWNGVKLDPVTVSSILPACADLKDLKSGKAIHGFAVRNGMVENVFVC 200
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+++YAKC +R A IFD M D+VSW+ V+ + +SLF QM +DGV+
Sbjct: 201 NALVNLYAKCLCVREAHAIFDLMPHRDVVSWSGVLT-YFTNKEYEKGLSLFSQMCRDGVE 259
Query: 241 PNSVAFVA--VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
N V + A +L + G + +S+ + ++ S + + R K+
Sbjct: 260 TNEVTWKAMEMLRKMQNMGFKPNEIT-ISSILQACYLSESLRMCKEIHYYVFRHWKVWNV 318
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILSN 353
++ I A W T+++A +H N + A + EK+ M+ P+++ +LS+
Sbjct: 319 FDMI----AIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPDSVTFICVLSS 371
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+ +LF +P D + +++I+ +GL +E + + IK F ++ ACA
Sbjct: 31 ARQLFDNIPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLDIPVFMAVAKACAA 90
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
K+LH R G N+F+ ++L+ Y KC + R +FD M + D+
Sbjct: 91 SRDALNVKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFDDMVVRDV------ 144
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+++F +M +GVK + V ++L AC+
Sbjct: 145 -----------KGLNVFHEMGWNGVKLDPVTVSSILPACA 173
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/475 (43%), Positives = 299/475 (62%), Gaps = 1/475 (0%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
D + SSV A+ ++ GK++HG A++ G+ V I +SL +MY KC D +LF
Sbjct: 83 DEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLF 142
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLH 159
+D ++WN +I V N +++ F M P S+SS++ +CA+L L+
Sbjct: 143 SNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALY 202
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
G +H IIR+GF N+ +ASSL+ MYAKCG++ A IF++ + ++V WTA+I
Sbjct: 203 QGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQ 262
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
HG+A+ + LFEQM ++G+KP+ + FV+VL+ACSH G +++ + YFNSM K +GI P
Sbjct: 263 QHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGH 322
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM 339
EHYA + DLL RAG+L A FI M P +VW LLSACR H N+ + +VA K+F
Sbjct: 323 EHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD 382
Query: 340 IDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK 399
++P+N G YV+L N +A +R M + G++K P CSWI++KN Y F DK
Sbjct: 383 LEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDK 442
Query: 400 SHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICT 459
SH I E L++L E ++++GYV +T+ + + EE K+ L+YHSE++A+ FG++
Sbjct: 443 SHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSL 501
Query: 460 PDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
P G IRI KNLR CGDCHT +KF S+I REIIVRD +RFHHF +G CSCGDYW
Sbjct: 502 PAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 35/318 (11%)
Query: 39 PDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL 98
P+ +T S+VL D + G+++H +HG A V + S+L++MYAKC + + ++
Sbjct: 8 PNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKV 67
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F +P L E L + VSFSS+ ACA+ L
Sbjct: 68 FEEMPT-----------------LLLENLTALDE----------VSFSSVFSACANAGNL 100
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
GKQ+HG ++ G + ++I +SL DMY KCG +F D+V+W +IM
Sbjct: 101 EFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAY 160
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ N DA + F M + G P+ ++ +VL +C++ + + N + + G +
Sbjct: 161 VYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRS-GFVKN 219
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEK 336
+++ + + G L +A++ NV W +++AC+ H + ++ E+
Sbjct: 220 LRVASSLITMYAKCGSLVDAFQIFEETE---DRNVVCWTAIIAACQQHGHANWVVELFEQ 276
Query: 337 IFM--IDPNNMGAYVILS 352
+ I P+ + +LS
Sbjct: 277 MLREGIKPDYITFVSVLS 294
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 11/264 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+WN +I+ N YE+A N M PD + SSVL A+ + +G IH
Sbjct: 149 DVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIH 208
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR G N+ + SSLI MYAKC + D+ ++F ++ + W +IIA C Q+G +
Sbjct: 209 NQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHAN 268
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFIASSL 183
++ F QML IKP +++F S++ AC+H + G +I+ +G + +
Sbjct: 269 WVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACI 328
Query: 184 LDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN----AHDAISLFEQMEKDG 238
+D+ ++ G + A+ + M + D W A++ H N A+ LF+ +E D
Sbjct: 329 VDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD-LEPD- 386
Query: 239 VKPNSVAFVAVLTACSHAGLIDKA 262
N +V + + G++++A
Sbjct: 387 ---NPGNYVLLCNILTRNGMLNEA 407
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + + P H +FS+++ AC T G+Q+H + ++GF +F+ S+L+DMYAKC +
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ +A +F++M + + TA+ + V+F +V +A
Sbjct: 61 MLMAEKVFEEMPTLLLENLTAL---------------------------DEVSFSSVFSA 93
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA 307
C++AG ++ + + G+ +++D+ G+ G + + SN A
Sbjct: 94 CANAGNLEFG-KQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGA 147
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/518 (38%), Positives = 302/518 (58%), Gaps = 6/518 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ SW ++ A NG Y +ALN++ M + P+S T +L A + +G+
Sbjct: 119 PRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGR 178
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H G A++ + + LINMYAKC + D+ +F L + I+W +++A NG
Sbjct: 179 ALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNG 238
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F + LK F M + ++P V+F +++ CA + +G+++HG +I + N+ + +
Sbjct: 239 FFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGN 297
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD---- 237
+L++MY KC + AR +FD M DI++W ++I +G A+ ++++M++
Sbjct: 298 ALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTI 357
Query: 238 -GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ + + F+ VL ACSHAGL+ + ++SM DYG P+ + DLLGRAG L
Sbjct: 358 LGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLD 417
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA EFI++M P +W LL AC H +VE A + A++I + P + G+YV LSN YA
Sbjct: 418 EAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYA 477
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A RW D A +R M +G+ K S IE+ + F+AGD SHP I E L+ +
Sbjct: 478 LAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEG 537
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ + GYVPD K VLH+ E K+ + +HSERLAI FG+I +P GT +RI+KNLRVC D
Sbjct: 538 VIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPD 597
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K ISK R+IIVRD +RFH F +G CSC DYW
Sbjct: 598 CHSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 122/228 (53%)
Query: 27 NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMY 86
+ V+ + + ++ P + L+ L + +GK IH + + G ++ + + L+ MY
Sbjct: 43 DAVQLLEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMY 102
Query: 87 AKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
KC ++ + +F + P ++ SW ++A NG + + L M + I P ++F
Sbjct: 103 GKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFI 162
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
++ A A L+ L G+ LH I GF ++F+A+ L++MYAKC ++ A +F+ +
Sbjct: 163 ELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSR 222
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+++WTA++ AL+G DA+ +F M DGV+P V FV V+ C+
Sbjct: 223 SVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCA 270
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 69/125 (55%)
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ P + + C + GK++H I+ GF + ++ + L++MY KCG+++ A+
Sbjct: 53 VSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAK 112
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+F ++ SWT ++ A +G+ DA++L E M+ +G+ PNS+ F+ +L A +
Sbjct: 113 SVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALS 172
Query: 258 LIDKA 262
+D+
Sbjct: 173 WLDRG 177
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 299/511 (58%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D +N+V+ L +G EA+ ++ +M + + DS T SV+ + D+ G ++
Sbjct: 190 NDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQV 249
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H ++ GL +V +GS L++M+ KC V + ++F L ++ + W S++ +QNG F
Sbjct: 250 HAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEF 309
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
+E L M +F+ ++ A A + L G LH + + G + + + ++L
Sbjct: 310 EETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNAL 369
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
++MY+KCG I + +F M DI++W A+I G + HG A+ LF+ M G PN
Sbjct: 370 INMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNH 429
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V FV VL+AC+H L+++ + Y N + K + + P EHY V +L RAG L+EA F+
Sbjct: 430 VTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMR 489
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
W LL+AC +H+N L K+AE I +DP +MG Y +LSN YA AR W
Sbjct: 490 TTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDS 549
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+R MR + +KK P SWIE++N + F + +HP +I ++ LLE ++Q GY
Sbjct: 550 VTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGY 609
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
VP+ + VLHDVE+EQK++ L YHSE+LAI +G++ P IR+IKNLR+C DCHTA+K
Sbjct: 610 VPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKL 669
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISK+ R IIVRD SRFHHF DG C+C D+W
Sbjct: 670 ISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 137/257 (53%), Gaps = 5/257 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +VS+N ++ G +G + E + + + M + +P+ + ++VL A V +G
Sbjct: 81 MSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEG 140
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF-----CLLPVKDAISWNSIIA 115
+ HG+ + GL + + SSL++MY+KC V+ + ++ + DA +NS++
Sbjct: 141 MQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLN 200
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
V++G E ++ +M+ + V++ S+M C + L LG Q+H +++ G
Sbjct: 201 ALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTF 260
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
++F+ S L+DM+ KCG++ AR +FD + ++V WT+++ +G + ++L M+
Sbjct: 261 DVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMD 320
Query: 236 KDGVKPNSVAFVAVLTA 252
++G N F +L A
Sbjct: 321 REGTMSNEFTFAVLLNA 337
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 17/256 (6%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N+ +SLIN+Y KC+++ + LF + ++ +S+N ++ G + +G E +K F+ M+
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIR 194
+ +P F++++ ACAH + G Q HG + + G + F+ SSL+ MY+KC ++
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 195 LARCIFDKM-----DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
LA + + + +D + +V+ G +A+ + +M +GV +SV +V+V
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 250 LTACSH-----AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+ C GL A +T D + + + D+ G+ G + A +
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG------SMLVDMFGKCGDVLSARKVFDG 287
Query: 305 MHAGPTENVWLTLLSA 320
+ VW +L++A
Sbjct: 288 LQ-NRNVVVWTSLMTA 302
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/514 (38%), Positives = 302/514 (58%), Gaps = 3/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW ++ A N ++E N+ R+M + PD FTL++ L + G
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLG 657
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH GL+A++ + ++L+NMY+ C ++ F + +D +SWN + A Q
Sbjct: 658 KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + FRQM + +KP ++FS+ + + GK H +G D ++ +A
Sbjct: 718 GLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVA 777
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ +YAKCG + A +F +V A+I A HG + +A+ +F +M+++GV+
Sbjct: 778 TGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVR 837
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V++++AC HAG++++ S F +M + +GI+P+ EHYA DLLGRAG+L+ A +
Sbjct: 838 PDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQ 897
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M VW +LL C++ + EL + A++I +DP+N A+V+LSN Y A +
Sbjct: 898 IIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGK 957
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKDA R M ++ +K P SW E+ + + FVAGD+SHP I L +L M +
Sbjct: 958 WKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRR 1017
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY D DVE+E K+ L YHSER+AI FG+I TP TT++I+KNLRVCGDCHTA
Sbjct: 1018 AGYEADKG---LDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTA 1074
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS ++ REIIVRD+ RFHHF +G CSC D W
Sbjct: 1075 TKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P LV+WN ++ A+N +EA + +M + PD+ + +SVL + Y +
Sbjct: 501 LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS--SCYCS--QE 556
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ I + C+ ++LI+M+ +C +E + +F + D +SW ++++ +N
Sbjct: 557 AQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAEN 616
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E FR+M + + P + ++ + C TTL LGK +H C+ G + ++ +
Sbjct: 617 RDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVE 676
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL+MY+ CG+ R A F+ M D+VSW + A G A +A+ LF QM+ +GVK
Sbjct: 677 NALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVK 736
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ + F L + L+ F+++ + G+ + L + GKL EA
Sbjct: 737 PDKLTFSTTLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEA 793
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 20/366 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
M ++VSW +I A+ G + A + R M + P+S+TL ++L A+ D+
Sbjct: 86 MEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145
Query: 60 GKEIHGYAIRHGLD----ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
G+ IH GL+ +G+++INMYAKC +ED+ +F +P KD +SW ++
Sbjct: 146 GRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAG 205
Query: 116 GCVQNGLF-DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
Q F + L+ FR+ML+ + P ++F + + AC T+L G LH +
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLG 262
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLH---DIVSWTAVIMGNALHGNAHDAISLF 231
+ +++L++MY KCG+ A +F M D+VSW A+I + G DA+++F
Sbjct: 263 FDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
++ +G++PNSV + +L A + +G+ A F+ + G A+ + +
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAK 382
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEK-----IFMIDPNNMG 346
G A+ + W T+L A K+ GKV + IDPN +
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSF---GKVVNTFHHMLLAGIDPNKVS 439
Query: 347 AYVILS 352
IL+
Sbjct: 440 FIAILN 445
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 137/254 (53%), Gaps = 5/254 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIKGKEI 63
DLVSWN +I G + +A+ I R++ ++P+S TL ++L + A VD +
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGF 357
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQNGL 122
HG G +V IG+++I+MYAKC + +F + K D ISWN+++
Sbjct: 358 HGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKS 417
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIAS 181
F + + F ML+A I P VSF +I+ AC++ L G+++H I+ D +A+
Sbjct: 418 FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477
Query: 182 SLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
L+ MY KCG+I A +F +M L +V+W ++ A + + +A +M + GV
Sbjct: 478 MLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537
Query: 240 KPNSVAFVAVLTAC 253
P++++F +VL++C
Sbjct: 538 LPDALSFTSVLSSC 551
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 151/308 (49%), Gaps = 18/308 (5%)
Query: 27 NIVRQMGN------VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGS 80
+I+RQ+ + V+ D +++L D D+ KGK H GL+ ++ +G+
Sbjct: 5 SIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGN 64
Query: 81 SLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIK 139
LINMY +C +E++H +F + ++ +SW ++I+ Q G F FR ML+ +
Sbjct: 65 CLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAA 124
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD----DNMFIASSLLDMYAKCGNIRL 195
P + +++ ACA+ L +G+ +H I G + + +++++MYAKCG++
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLED 184
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +F + D+VSWTA+ A + DA+ +F +M + PN + F+ L AC+
Sbjct: 185 AIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT 244
Query: 255 HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV- 313
L D W + G P + A+ ++ G+ G + AY M + ++
Sbjct: 245 --SLRDGTWLHSLLHEASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLV 300
Query: 314 -WLTLLSA 320
W ++SA
Sbjct: 301 SWNAMISA 308
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 227/525 (43%), Gaps = 43/525 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNG-LYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D+VSW + A+ Y +AL I R+M L P+ T + L D
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD--- 248
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK---DAISWNSIIAG 116
G +H L + ++LINMY KC E ++ +F + + D +SWN++I+
Sbjct: 249 GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA 308
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPA-CAHLTTLHLGKQLHGCIIRNGFDD 175
V+ G + + FR++ + ++P V+ +I+ A A + HG I +G+
Sbjct: 309 SVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLR 368
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM 234
++ I ++++ MYAKCG A +F ++ D++SW ++ + + ++ F M
Sbjct: 369 DVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHM 428
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLID---KAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
G+ PN V+F+A+L ACS++ +D K S + +DY + S + + G+
Sbjct: 429 LLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSVA--TMLVSMYGK 485
Query: 292 AGKLQEAYEFISNMHAGPTENV--WLTLLSA-CRVHKNVELAGKVAEKI-FMIDPNNMGA 347
G + EA E + P+ ++ W +L A + ++ E G + E + + P+ +
Sbjct: 486 CGSISEA-ELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSF 544
Query: 348 YVILSNTYAAARRWKDAASLRVFMRNKGMKKT----------PACSWIEVKNKAYAFVA- 396
+LS+ Y + ++A LR+ + G + C +E + +
Sbjct: 545 TSVLSSCYCS----QEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDH 600
Query: 397 GD-------KSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
GD S +R + + L RM+ EG +PD + ++ L
Sbjct: 601 GDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVI 660
Query: 450 LAIVFGIICTPDGTTIRIIKNLRV-CGDCHTAIKFISKIVQREII 493
A V I D + N+ CGD A+ F + R+++
Sbjct: 661 HACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 313/522 (59%), Gaps = 10/522 (1%)
Query: 1 MPVSDLVSWNTVIVGLARN--GLYEEALNIVR-QMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP D VSWN++I LAR+ L E + + Q L +F+ + ++
Sbjct: 476 MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFC-LLPVKDAISWNSIIAG 116
GK+IHG A+++ + ++LI Y KC ++ ++F + +D ++WNS+I+G
Sbjct: 536 --GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+ N L + L ML + +++++ A A + TL G ++H C +R + +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+L+DMY+KCG + A F+ M + + SW ++I G A HG +A+ LFE M+
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 237 DG-VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
DG P+ V FV VL+ACSHAGL+++ + +F SM+ YG+AP EH++ +AD+LGRAG+L
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 296 QEAYEFISNMHAGPTENVWLTLLSAC-RVH-KNVELAGKVAEKIFMIDPNNMGAYVILSN 353
+ +FI M P +W T+L AC R + + EL K AE +F ++P N YV+L N
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YAA RW+D R M++ +KK SW+ +K+ + FVAGDKSHP I + LKE
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGT-TIRIIKNLR 472
L +M GYVP T L+D+E+E K+ +L YHSE+LA+ F + T IRI+KNLR
Sbjct: 894 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 953
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
VCGDCH+A K+ISKI R+II+RD++RFHHF+DG CSC D+W
Sbjct: 954 VCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 143/252 (56%), Gaps = 6/252 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFT-LSSVLPIF--ADYVD 56
M + V+ N ++VGL R EEA + M + +++ P+S+ L S P + A+ V
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 57 VIKGKEIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
+ KG+E+HG+ I GL D V IG+ L+NMYAKC + D+ R+F + KD++SWNS+I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G QNG F E ++ ++ M I P + S + +CA L LG+Q+HG ++ G D
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNA-HDAISLFEQM 234
N+ ++++L+ +YA+ G + R IF M HD VSW ++I A + +A+ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 235 EKDGVKPNSVAF 246
++ G K N + F
Sbjct: 509 QRAGQKLNRITF 520
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 5/239 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVI 58
MP+ + VSW ++ G +RNG ++EAL +R M + + + SVL + V ++
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKC-ARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G++IHG + + + + LI+MY KC V + F + VK+++SWNSII+
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT--LHLGKQLHGCIIRNGFDD 175
Q G + F M +P +F S++ LT + L +Q+ I ++G
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
++F+ S L+ +AK G++ AR +F++M+ + V+ +++G +A LF M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 15/302 (4%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H ++ LD +V + ++LIN Y + + ++F +P+++ +SW I++G +NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL--GKQLHGCIIRNGFDDNMFIA 180
E L F R M+ I +F S++ AC + ++ + G+Q+HG + + + + ++
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 181 SSLLDMYAKC-GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L+ MY KC G++ A C F +++ + VSW ++I + G+ A +F M+ DG
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 240 KPNSVAFVA-VLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P F + V TACS + + G+ + + ++G L A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNM-----GAYVILSN 353
+ + M T N L+ V + G+ A K+FM D N+M +YVIL +
Sbjct: 263 RKVFNQME---TRNA--VTLNGLMVGLVRQKWGEEATKLFM-DMNSMIDVSPESYVILLS 316
Query: 354 TY 355
++
Sbjct: 317 SF 318
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/548 (37%), Positives = 316/548 (57%), Gaps = 34/548 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADY--VDVI 58
+P D V+W TV+ + L +A +I + + L+PD F SS++ A+ V V
Sbjct: 69 LPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVK 128
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------ 88
GK++H + + + SSL++MYAK
Sbjct: 129 LGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYA 188
Query: 89 -CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK-PRHVSFS 146
R ++ LF P K+ +W ++I+G VQ+G ++ L F +M + + S
Sbjct: 189 RSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLS 248
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
S++ ACA+ LGKQ+H +I G++ +FI+++L+DMYAKC ++ A+ IF +M
Sbjct: 249 SVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRK 308
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
D+VSWT++I+G A HG A +A++L++ M GVKPN V FV ++ ACSH GL+ K + F
Sbjct: 309 DVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALF 368
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKN 326
SM +D+GI PS +HY + DL R+G L EA I M P E W LLSAC+ H N
Sbjct: 369 KSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGN 428
Query: 327 VELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIE 386
++A ++A+ + + P + +Y++LSN YA A W++ + +R M K +KK P S ++
Sbjct: 429 TKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVD 488
Query: 387 VKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYH 446
+ + F AG+ S P I + +L M + GYVPDT VL D+++++K+ L++H
Sbjct: 489 LGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWH 548
Query: 447 SERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
SERLA+ +G++ GTTIRI+KNLRVCGDCHT +K IS I REI VRD R+HHF+DG
Sbjct: 549 SERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDG 608
Query: 507 KCSCGDYW 514
KCSC D+W
Sbjct: 609 KCSCNDFW 616
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 14/238 (5%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
LK F+L P A K++H I+ GL+ + +LI+ Y KC ++D+
Sbjct: 12 LKSQLFSLGRKNPFIA--------KKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDAL 63
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
+LF LP +D ++W ++++ C + L + +L ++P H FSS++ ACA+L
Sbjct: 64 KLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLG 123
Query: 157 TLH--LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
++H LGKQLH + + F ++ + SSL+DMYAK R +FD + +SWTA+
Sbjct: 124 SVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAM 183
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
I G A G +A+ LF ++ N A+ A+++ +G + A F M ++
Sbjct: 184 ISGYARSGRKLEALELF----RESPFKNLYAWTALISGLVQSGNANDALYLFVEMRRE 237
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/521 (41%), Positives = 312/521 (59%), Gaps = 9/521 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLP--IFADYVDVIK 59
PV + WN ++ LA EEAL + MG + + DS++ + L I A V
Sbjct: 141 PVKSIFVWNALLKALALADHGEEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPA 200
Query: 60 G---KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+EIH +A+R G + + ++LI+ YAK V + +F +P ++ +SW ++I
Sbjct: 201 SALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGC 260
Query: 117 CVQNGLFDEGLKFFRQMLIAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
+N + + F++M+ + + P V+ I+ A A + L GK LH I+R GFD
Sbjct: 261 YAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFD 320
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ + ++L+ MY KCG + R IFD + D+VSW +I G +HG H+A+ +FE
Sbjct: 321 SLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFED 380
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
M + GV PN + F++VL ACSHAGL+D+ F SM DY + P EHYA + DLLGRAG
Sbjct: 381 MTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMV-DYNVTPRAEHYACMVDLLGRAG 439
Query: 294 KLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSN 353
L EA E I MH P+ VW +LL ACR+H++VE A ++F ++P N G YV+L++
Sbjct: 440 HLDEAVELIQGMHIRPSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLAD 499
Query: 354 TYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKE 413
YA A+ + L+ + ++K P CSWIEVK + + FV+ D +P + + E
Sbjct: 500 IYARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGE 559
Query: 414 LLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRV 473
+ +M+ +GYVPDT VL+D+EEE+K+ +L HSE+LA+ FG+I T G IRI KNLR+
Sbjct: 560 FVTQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRL 619
Query: 474 CGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
C DCH+ KFISK +REIIVRD +RFHHF DG CSCGDYW
Sbjct: 620 CEDCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW 660
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP ++VSW +I A+N +A+ + ++M + +L P+S T+ +L FA +
Sbjct: 246 MPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALG 305
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGC 117
+GK +H Y +R G D+ V + ++L+ MY KC +E +F L+ KD +SWN++I+G
Sbjct: 306 QGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGY 365
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+G E ++ F M + P ++F S++ AC+H + GK+L ++
Sbjct: 366 GMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRA 425
Query: 178 FIASSLLDMYAKCGNI 193
+ ++D+ + G++
Sbjct: 426 EHYACMVDLLGRAGHL 441
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + LI+ YA + + ++F PVK WN+++ +E L M +
Sbjct: 116 LSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADMGRLR 175
Query: 138 IKPRHVSFSSIMPACAHLTTLH-----LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
+ S++ + AC +T H L +++H +R G+ + +A++L+D YAK G
Sbjct: 176 VPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGI 235
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFVAVL 250
+ A +F M ++VSWTA+I A + DAI LF++M + + PNSV V +L
Sbjct: 236 VSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCIL 295
Query: 251 TA 252
A
Sbjct: 296 HA 297
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
F + F+++ L+D YA G + AR +FD+ + I W A++ AL + +A++
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169
Query: 233 QMEKDGVKPNSVAFVAVLTAC 253
M + V +S ++ L AC
Sbjct: 170 DMGRLRVPVDSYSYAHGLKAC 190
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/551 (37%), Positives = 320/551 (58%), Gaps = 37/551 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V+WNT+I R GL +EA + +M + N+ PD L +++ ++
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 61 KEIHGYAIR-------HGLDA------------------------NVCIGSSLINMYAKC 89
+ I+ + I H L A N+ + +++++ Y+KC
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
R++D+ +F KD + W ++I+ V++ E L+ F +M + IKP VS S++
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
ACA+L L K +H CI NG + + I ++L++MYAKCG + R +F+KM ++V
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW+++I ++HG A DA+SLF +M+++ V+PN V FV VL CSH+GL+++ F SM
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
T +Y I P EHY + DL GRA L+EA E I +M +W +L+SACR+H +EL
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 531
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A++I ++P++ GA V++SN YA +RW+D ++R M K + K S I+
Sbjct: 532 GKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNG 591
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K++ F+ GDK H + I L E++ +++ GYVPD VL DVEEE+KK+L+ +HSE+
Sbjct: 592 KSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEK 651
Query: 450 LAIVFGIICTPDGT------TIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHF 503
LA+ FG++ IRI+KNLRVC DCH K +SK+ +REIIVRD +RFH +
Sbjct: 652 LALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCY 711
Query: 504 EDGKCSCGDYW 514
++G CSC DYW
Sbjct: 712 KNGLCSCRDYW 722
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 164/351 (46%), Gaps = 37/351 (10%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+ +N + L+R+ + +++ +V + D F+ +L + + +G E+HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
A + + + + ++MYA C R+ + +F + +D ++WN++I + GL DE
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--------------- 171
K F +M + + P + +I+ AC + + ++ +I N
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 172 ----GFDD------------NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
G D N+F++++++ Y+KCG + A+ IFD+ + D+V WT +I
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
+A+ +FE+M G+KP+ V+ +V++AC++ G++DKA + +S G+
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGL 375
Query: 276 APSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
A+ ++ + G L + M P NV W ++++A +H
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKM---PRRNVVSWSSMINALSMH 423
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/543 (37%), Positives = 313/543 (57%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D WN +I GL+ + + +L + +M + +++T +L ++ + +IH
Sbjct: 74 DTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIH 133
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII---------- 114
+ + G ++ +SLIN YA + +H LF + DA+SWNS+I
Sbjct: 134 AHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMD 193
Query: 115 ----------------------AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC 152
+G VQ G+ E L+ F +M + + P +VS +S + AC
Sbjct: 194 MALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSAC 253
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
+ L L GK +H + + + L+DMYAKCG + A +F M + WT
Sbjct: 254 SQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWT 313
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G A HG +AIS F +M+ GVKPN++ F AVLTACS+ GL+++ S FN++ +D
Sbjct: 314 ALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERD 373
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
Y + P+ EHY + DLLGRAG L EA FI M P +W +LL AC++HKN+EL K
Sbjct: 374 YNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEK 433
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
+ E + +D N+ G YV ++N +A ++W AA R MR +G+ K P CS I ++ +
Sbjct: 434 IGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTH 493
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHD-VEEEQKKNLLYYHSERLA 451
F+AGD+SH I + + ++E+ GYVP+ +++L D V++E+K+ +++ HSE+LA
Sbjct: 494 EFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLA 553
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I +G++ T GTTIRI+KNLRVC DCH + ISKI +R+I++RD +RFHHF+DGKCSCG
Sbjct: 554 ITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCG 613
Query: 512 DYW 514
DYW
Sbjct: 614 DYW 616
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 6/224 (2%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++ +SW T+I G + G+ +EAL + +M N N+ PD+ +L+S L + + +GK I
Sbjct: 206 NNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWI 265
Query: 64 HGYA--IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
H YA R +D+ +C LI+MYAKC +E++ +F + K W ++I+G +G
Sbjct: 266 HSYANKTRTRIDSVLC--CVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHG 323
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIA 180
L E + F +M +KP ++F++++ AC++ + GK + I R+ +
Sbjct: 324 LGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHY 383
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A KM L + V W +++ +H N
Sbjct: 384 GCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKN 427
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + W +I G A +GL EA++ +M N+ +KP++ T ++VL + V +G
Sbjct: 304 MKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEG 363
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
K + R + L + ++++ + + +++R +P+K +A+ W S++ C
Sbjct: 364 KSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKAC 422
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 311/515 (60%), Gaps = 5/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D +++NT+I +R +L M + + D+FT VL + +
Sbjct: 48 IPSPDTIAYNTIIRSHSR-FFPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSR---LQIN 103
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H +++GLD+++ + ++LI +Y C +E + ++F + +D++SW+++IA + N
Sbjct: 104 LHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNN 163
Query: 121 GLFDEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E L F +M L K+ P V+ S++ A +HL L LG+ + I R G ++ +
Sbjct: 164 GYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVAL 223
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DM+++CG+I + +F+KM + ++++WTA+I G +HG + +A+++F M K GV
Sbjct: 224 GTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGV 283
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V F VL ACSH GL+ + W F S+ K Y + P +HY + D+LGRAG L EAY
Sbjct: 284 QPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAY 343
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+F+ M P +W TLL AC H N+ LA KV KI I + G V+LSN Y AA
Sbjct: 344 DFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAG 403
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + AS+R MR K + K P CS I V + FV+GD SHP I + L ++ +
Sbjct: 404 RWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLR 463
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY+ TK VLHD+EEE++++ L YHSE+LA+ F I+ D TIRI+KNLR+C DCH+
Sbjct: 464 NRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHS 523
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K IS +R+II+RD +RFHHFE G CSC DYW
Sbjct: 524 FMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 310/526 (58%), Gaps = 16/526 (3%)
Query: 1 MPVSDLVSWNTVIVGLA--RNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
+PV +++SWN +I G RNG EEALN+ R+M PD +T SS L +
Sbjct: 65 LPVRNVISWNAMIAGYTNERNG--EEALNLFREMREKGEVPDGYTYSSSLKACSCADAAG 122
Query: 59 KGKEIHGYAIRHGLD--ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+G +IH IRHG A + +L+++Y KC R+ ++ ++F + K +SW+++I G
Sbjct: 123 EGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILG 182
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD- 175
Q E + FR++ ++ + SSI+ A L GKQ+H I+ +
Sbjct: 183 YAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLL 242
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
M +A+S+LDMY KCG A +F +M ++VSWT +I G HG + A+ LF +M+
Sbjct: 243 EMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQ 302
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++G++P+SV ++AVL+ACSH+GLI + YF+ + + I P EHYA + DLLGR G+L
Sbjct: 303 ENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRL 362
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
+EA I M P +W TLLS CR+H +VE+ +V E + + NN YV++SN Y
Sbjct: 363 KEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMY 422
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
A A WK++ +R ++ KG+KK SW+E+ + + F GD HP I+E LKE+
Sbjct: 423 AHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEME 482
Query: 416 ERMEQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG------TTIRII 468
+R+++E GYV LHDVEEE K L HSE+LAI G++ G IRI
Sbjct: 483 KRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAI--GLVLVRRGLKLKGERVIRIF 540
Query: 469 KNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KNLRVCGDCH IK +SK+++ +VRD +RFH FE+G CSCGDYW
Sbjct: 541 KNLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
+ I+ C+ L GKQ+HG + + GFD + +S++DMY+KCG + A +F+ +
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS---------- 254
+ +++SW A+I G N +A++LF +M + G P+ + + L ACS
Sbjct: 67 VRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQ 126
Query: 255 -HAGLIDKAWSYF 266
HA LI + Y
Sbjct: 127 IHAALIRHGFPYL 139
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/514 (38%), Positives = 303/514 (58%), Gaps = 3/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW ++ A N ++E ++ R+M + PD FTL++ L D + G
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG 657
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH GL+A++ + ++L+NMY+ C ++ F + +D +SWN + A Q
Sbjct: 658 KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E + FR M + +KP ++FS+ + + GK HG +G D ++ +A
Sbjct: 718 GLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVA 777
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ +YAKCG + A +F +V A+I A HG + +A+ +F +M+++GV+
Sbjct: 778 TGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVR 837
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ V++++AC HAG++++ S F +M + +GI+P+ EHYA DLLGRAG+L+ A +
Sbjct: 838 PDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQ 897
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M VW +LL C++ + EL + A++I +DP+N A+V+LSN Y A +
Sbjct: 898 IIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGK 957
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WKDA R + ++ +K P SW+E+ + + FVAGD+SHP I L +L M +
Sbjct: 958 WKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRR 1017
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GY D D E+E K+ L YHSER+AI FG+I TP TT++I+KNLRVCGDCHTA
Sbjct: 1018 AGYEADKG---LDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTA 1074
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K+IS I+ REIIVRD+ RFHHF +G CSC D W
Sbjct: 1075 TKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 174/366 (47%), Gaps = 20/366 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
M ++VSW +I A++G + A + R M + P+S+TL ++L A+ D+
Sbjct: 86 MEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145
Query: 60 GKEIHGYAIRHGLD----ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
G+ IH GL+ +G+++INMYAKC ED+ +F +P KD +SW ++
Sbjct: 146 GRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAG 205
Query: 116 GCVQNGLF-DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
Q F + L+ FR+ML+ + P ++F + + AC T+L G LH + G
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLG 262
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLH---DIVSWTAVIMGNALHGNAHDAISLF 231
+ ++L++MY KCG+ A +F M D+VSW A+I + G DA+++F
Sbjct: 263 FDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
++ +G++PNSV + +L A + +G+ A F+ + G A+ + +
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAK 382
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEK-----IFMIDPNNMG 346
G A+ + W T+L A K+ GKV + IDPN +
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSF---GKVVNTFHHMLLAGIDPNKVS 439
Query: 347 AYVILS 352
IL+
Sbjct: 440 FIAILN 445
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 148/298 (49%), Gaps = 5/298 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P LV+WN ++ A+N +EA + +M + PD+ + +SVL + Y +
Sbjct: 501 LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS--SCYCS--QE 556
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ I + C+ ++LI+M+ +C +E + +F + D +SW ++++ +N
Sbjct: 557 AQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAEN 616
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F E FR+M + + P + ++ + C TTL LGK +H C+ G + ++ +
Sbjct: 617 RDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVE 676
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LL+MY+ CG+ R A F+ M D+VSW + A G A +A+ LF M+ +GVK
Sbjct: 677 NALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVK 736
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ + F L + L+ F+ + + G+ + L + GKL EA
Sbjct: 737 PDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEA 793
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 138/254 (54%), Gaps = 5/254 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-PIFADYVDVIKGKEI 63
DLVSWN +I G + +A+ I R++ ++P+S TL ++L + A VD ++
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKF 357
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQNGL 122
HG G +V +G+++I+MYAKC + +F + K D ISWN+++
Sbjct: 358 HGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKS 417
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFIAS 181
F + + F ML+A I P VSF +I+ AC++ L G+++H I+ D +A+
Sbjct: 418 FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477
Query: 182 SLLDMYAKCGNIRLARCIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
L+ MY KCG+I A +F +M L +V+W ++ A + + +A +M + GV
Sbjct: 478 MLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537
Query: 240 KPNSVAFVAVLTAC 253
P++++F +VL++C
Sbjct: 538 LPDALSFTSVLSSC 551
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 152/307 (49%), Gaps = 18/307 (5%)
Query: 28 IVRQMGN------VNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSS 81
I+RQ+ + V+ D +++L D D+ KGK H GL+ ++ +G+
Sbjct: 6 IIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNC 65
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI-AKIKP 140
LINMY +C +E++H +F + ++ +SW ++I+ Q+G F FR ML+ + P
Sbjct: 66 LINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAP 125
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN----MFIASSLLDMYAKCGNIRLA 196
+ +++ ACA+ L +G+ +H I G + + +++++MYAKCG+ A
Sbjct: 126 NSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDA 185
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+F + D+VSWTA+ A + DA+ +F +M + PN + F+ L AC+
Sbjct: 186 IAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT- 244
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV-- 313
L D W +S+ + G+ A+ ++ G+ G + AY M + ++
Sbjct: 245 -SLRDGTW--LHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVS 301
Query: 314 WLTLLSA 320
W ++SA
Sbjct: 302 WNAMISA 308
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 318/541 (58%), Gaps = 31/541 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V+WN +I G +NG Y++AL + M + ++KPDS L +VL ++ G+ IH
Sbjct: 186 DAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIH 245
Query: 65 GYAIRHGLDANVCIGSSLINMYAKC-----AR--------------------------VE 93
+ +G + + ++LINMYA C AR V+
Sbjct: 246 EFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVK 305
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
D+ +F + +D + W+++I+G ++ E LK F +ML + P ++ S++ AC+
Sbjct: 306 DARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACS 365
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
H+ L +H + R+GF + + ++L+DMYAKCGN+ AR +F+ M +++SW++
Sbjct: 366 HVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSS 425
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I A+HGNA AI LF +M++ ++PN V F+ VL AC HAGL+++ F+SM ++
Sbjct: 426 MINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEH 485
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
GI+P+ EHY + DL RA L++A E I M P +W +L+SAC+VH EL
Sbjct: 486 GISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFA 545
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+++ ++P++ GA V+LSN YA +RW D +R M KG+ K A S IE+ N+ +
Sbjct: 546 AKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHM 605
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F+ D+ H I E L E++ +++ GY P T +L D+EEE KK L+ +HSE+LA+
Sbjct: 606 FMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVC 665
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+G+I + + IRI+KNLR+C DCH+ +K +SK+ Q EI+VRD +RFHH G CSC DY
Sbjct: 666 YGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDY 725
Query: 514 W 514
W
Sbjct: 726 W 726
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 182/372 (48%), Gaps = 40/372 (10%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
N ++ L+R+ E+ + + + +N D F+ S+L + G EIHG A
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + I + LI MYA C R+ D+ LF + DA++WN II G QNG +D+ L+
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F M + +KP V +++ AC H L G+ +H + NG+ + + ++L++MYA
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 189 KCGNIRL-------------------------------ARCIFDKMDLHDIVSWTAVIMG 217
CG + L AR IFD+M D+V W+A+I G
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A +A+ LF++M + P+ + ++V++ACSH G + +A ++ ++ G
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGR 387
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAE 335
+ A+ D+ + G L +A E NM P +NV W ++++A +H N + A K+
Sbjct: 388 ALSVNNALIDMYAKCGNLVKAREVFENM---PRKNVISWSSMINAFAMHGNADSAIKLFR 444
Query: 336 KI--FMIDPNNM 345
++ I+PN +
Sbjct: 445 RMKEVNIEPNGV 456
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW+++I A +G + A+ + R+M VN++P+ T VL V +G
Sbjct: 415 MPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEG 474
Query: 61 KEIHGYAI-RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCV 118
+++ I HG+ ++++Y + + + L +P + I W S+++ C
Sbjct: 475 EKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQ 534
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRH 142
+G + L F + +++P H
Sbjct: 535 VHG--EAELGEFAAKRLLELEPDH 556
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/519 (39%), Positives = 315/519 (60%), Gaps = 6/519 (1%)
Query: 1 MPVSDLVSWNTVI-VGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
M D+VSWN+++ V + E++ + M L P+ T + L +
Sbjct: 545 MSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLEL 604
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP-VKDAISWNSIIAGCV 118
GK+IH ++HG+ + + ++L++ YAK V+ RLF + +DAISWNS+I+G +
Sbjct: 605 GKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYI 664
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG E + M+ ++ H +FS ++ ACA + L G ++H +R+ + ++
Sbjct: 665 YNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVV 724
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+L+DMY+KCG I A +F M + SW ++I G A HG A+ +FE+M++ G
Sbjct: 725 VESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESG 784
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
P+ V FV+VL+ACSHAGL+++ YF M +DYGI P EHY+ V DLLGRAG+L +
Sbjct: 785 ESPDHVTFVSVLSACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKI 843
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKN---VELAGKVAEKIFMIDPNNMGAYVILSNTY 355
E++ M P +W T+L AC+ K+ ++L + + + ++P N YV+ S +
Sbjct: 844 QEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFH 903
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
AA RW+D A R M+ +KK SW+ + + + F+AGD+SHP I E L L+
Sbjct: 904 AAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLI 963
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
+++ GYVP T+ VLHD+EEE K+ LL YHSE+LA+ F + + G IRI+KNLRVCG
Sbjct: 964 QKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCG 1023
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCHTA ++IS+IV R+II+RD+ RFHHF+DGKCSCGDYW
Sbjct: 1024 DCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 12/322 (3%)
Query: 7 VSWNTVIVGLARNGLYEEALNI---VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
V+ N +I GL + E A I R VN+ LS++ + KG+E+
Sbjct: 345 VTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREV 404
Query: 64 HGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H + +R G + + + + L+NMYAKC ++ + R+F L+ +D ISWN+II QNG
Sbjct: 405 HAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGY 464
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+ + + M I P + + S + +CA L L G+QLH ++ G + ++++
Sbjct: 465 CEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNA 524
Query: 183 LLDMYAKCGNIRLARC--IFDKMDLHDIVSWTAVIMGNALHGNA--HDAISLFEQMEKDG 238
L+ MY +CG R++ C IF+ M HD+VSW + IMG A +++ +F M K G
Sbjct: 525 LVKMYGECG--RMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSG 581
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ PN V FV L A + +++ + M K +G+ A+ ++G +
Sbjct: 582 LVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALMSCYAKSGDVDSC 640
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
S M W +++S
Sbjct: 641 ERLFSRMSGRRDAISWNSMISG 662
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 163/344 (47%), Gaps = 16/344 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SWNT+I L +NG E A+ M ++ P +F S L A + G
Sbjct: 444 MEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAG 503
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A++ GL + + ++L+ MY +C R+ + +F + D +SWNSI+ +
Sbjct: 504 QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASS 563
Query: 121 -GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E ++ F M+ + + P V+F + + A L+ L LGKQ+H ++++G ++ +
Sbjct: 564 QAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAV 623
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++L+ YAK G++ +F +M D +SW ++I G +G+ +A+ M
Sbjct: 624 DNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSE 683
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADLLGRAGK 294
+ F VL AC+ +++ +G+ E +A+ D+ + G+
Sbjct: 684 QMMDHCTFSIVLNACASVAALERGME-----MHAFGLRSHLESDVVVESALVDMYSKCGR 738
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
+ A + +M + E W +++S H G+ A +IF
Sbjct: 739 IDYASKVFHSM-SQKNEFSWNSMISGYARHG----LGRKALEIF 777
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 157/317 (49%), Gaps = 33/317 (10%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H ++ GL ++ + + L+N YAK AR++ + R+F +P ++A+SW +I+G V +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 121 GLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLG--KQLHGCIIRNGFDDN 176
GL ++ FR ML +P +F S++ AC LG Q+HG + + F N
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 177 MFIASSLLDMYAKC--GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
+ ++L+ MY C G LA+ +FD + D+++W A++ A G+A +LF M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 235 EKDG----VKPNSVAFVAVLTA-----CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
+ D ++P F +++TA CS GL+D+ F + K G + +A+
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQ---LFVRVLKS-GCSSDLYVGSAL 319
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENVWLTL--LSACRVHKNVELAGKVAEKIFMIDPN 343
R G L EA +++ G E +TL L A V + G+ A +IFM +
Sbjct: 320 VSAFARHGMLDEA----KDIYLGLKERNAVTLNGLIAGLVKQQ---HGEAAAEIFMGARD 372
Query: 344 ----NMGAYVILSNTYA 356
N+ YV+L + A
Sbjct: 373 SAAVNVDTYVVLLSAIA 389
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 24/269 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP + VSW +I G +GL E+A + R M +P SFT SVL D
Sbjct: 126 MPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQD----- 180
Query: 59 KGKEIHGYAIR-HGL------DANVCIGSSLINMYAKCARVED--SHRLFCLLPVKDAIS 109
G + G+A++ HGL +N + ++LI+MY C+ + R+F PV+D I+
Sbjct: 181 SGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLIT 240
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHLG--KQ 163
WN++++ + G FR M +++P +F S++ A +L++ LG Q
Sbjct: 241 WNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQ 299
Query: 164 LHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN 223
L ++++G ++++ S+L+ +A+ G + A+ I+ + + V+ +I G +
Sbjct: 300 LFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQH 359
Query: 224 AHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
A +F +D N +V +L+A
Sbjct: 360 GEAAAEIF-MGARDSAAVNVDTYVVLLSA 387
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 317/548 (57%), Gaps = 34/548 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVD--VI 58
MP ++ +W + + NG + EAL R+M +PD T S +L A +
Sbjct: 123 MPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAID 182
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+EIH YA GL NV +G+++I+MY KC R++D+ F L K++++WN+++
Sbjct: 183 QGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK 242
Query: 119 QNGLFDEGLKFFRQM----------LIA----------------------KIKPRHVSFS 146
+G E L+ FR+M +IA + P+ +F
Sbjct: 243 LDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFV 302
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ CA L+ L G+ +H + FD N+ ++++L+ MY KCG + A +F M L
Sbjct: 303 TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLK 362
Query: 207 DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYF 266
D +SW +I A HG++ A+ L+++M+ GVKP V FV +L+ACSH GL+ YF
Sbjct: 363 DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYF 422
Query: 267 NSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKN 326
M D+ I PS H+ + DLLGR G+L EA + +M W++LL AC+ H +
Sbjct: 423 YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGD 482
Query: 327 VELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIE 386
++ + A+++ P G YV+LSN YAAA RWKD +R M +G+KK+P SWIE
Sbjct: 483 LKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIE 542
Query: 387 VKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYH 446
+ + + FV+GD SHP I L +++E M+ GYVPDT V HD+EEE+K++LL H
Sbjct: 543 IGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCH 602
Query: 447 SERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDG 506
SE+LAIV+G + P + +RI+KNLRVC DCHTA KF+S+I R+I+VRD +RFH FE+G
Sbjct: 603 SEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENG 662
Query: 507 KCSCGDYW 514
CSC DYW
Sbjct: 663 SCSCRDYW 670
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LI MY KC R+ + LF +P ++ +W +A NG E L FFR+M + +P
Sbjct: 103 LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPD 162
Query: 142 HVSFSSIMPACAHLTTLHL--GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
V+FS I+ A A + + G+++H +G N+ + ++++ MY KCG + AR
Sbjct: 163 RVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAA 222
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F+++ + V+W A++ L G +A+ LF +M +SV + A++ A + G
Sbjct: 223 FEELQWKNSVTWNAMMTNYKLDGRDREALELFREMH----DADSVCWNAMIAAYAQHGRG 278
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+A + SM +AP + V D+ L++
Sbjct: 279 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQG 317
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM--FIASSLLDMYAKCGNIRLARCIF 200
V +++++ C + ++LH I+ ++ F+A+ L++MY KCG + AR +F
Sbjct: 61 VGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELF 120
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL--TACSHAGL 258
+ M ++ +WT + + +G +A+ F +M + G +P+ V F +L A A
Sbjct: 121 ESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAA 180
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
ID+ + + G+ P+ AV + G+ G+L +A
Sbjct: 181 IDQG-REIHRYARISGLLPNVVVGTAVISMYGKCGRLDDA 219
>gi|242053821|ref|XP_002456056.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
gi|241928031|gb|EES01176.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
Length = 592
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 306/518 (59%), Gaps = 19/518 (3%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL-----------PIFADYVD 56
+W+++I A+NGL A + R+M + + S P FA +
Sbjct: 83 AWSSLISSFAQNGLAAAAFDTFRRMLAAGVPATDRNIPSAAKAVAAAETLSRPPFAPHA- 141
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+HG A + +V +GS++++MYAKC + D+ RLF +P ++ +SW+++I G
Sbjct: 142 ------LHGLAAKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMPERNVVSWSALICG 195
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
G+ + FR L + + SSI+ CA T LG Q+H + D +
Sbjct: 196 YADAGMHPAAMGIFRLALEEAVPVNDFTVSSIIRVCAAATLFELGAQVHARATKTALDAS 255
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
F+ SSL+ +Y+KCG + A +F++ ++ W AV++ +A HG+ A F +M+
Sbjct: 256 PFVGSSLVSVYSKCGLVECAYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFMEMQN 315
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G +PN + F+ ++TACSHAGL+D+ YF S+ KDYGI P EHYA++ DLLGR G+++
Sbjct: 316 AGFRPNHITFLCLVTACSHAGLVDEGKRYF-SLMKDYGIEPQAEHYASMVDLLGRVGRIK 374
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA + I +M P E+VW LL +CR+ K+ + A A+++F + GA+++LS+TYA
Sbjct: 375 EALDLIESMPMEPPESVWGALLMSCRIFKDADTAEIAAKRLFETGSRSSGAHMLLSSTYA 434
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA R DAA R MR+ G++K SW+E + + FV+ + H I + L+++ E
Sbjct: 435 AAGRHIDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHQRSEEIYKVLEKVGE 494
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ME GYV DT V+ DV+ ++K+ + YHSERLAI G++ P G IR++KNLRVC D
Sbjct: 495 KMEAAGYVADTSAVVKDVDGDEKRATVRYHSERLAIGLGLLIVPQGVPIRVMKNLRVCDD 554
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+AIK+++K R +++RDN RFH FEDG CSCGD+W
Sbjct: 555 CHSAIKYLTKCTGRVVVLRDNRRFHRFEDGVCSCGDFW 592
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 156/338 (46%), Gaps = 27/338 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G A G++ A+ I R + + FT+SS++ + A G
Sbjct: 181 MPERNVVSWSALICGYADAGMHPAAMGIFRLALEEAVPVNDFTVSSIIRVCAAATLFELG 240
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H A + LDA+ +GSSL+++Y+KC VE ++R+F P K+ WN+++ Q+
Sbjct: 241 AQVHARATKTALDASPFVGSSLVSVYSKCGLVECAYRVFNEAPEKNLGIWNAVLIASAQH 300
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + F +M A +P H++F ++ AC+H + GK+ + G +
Sbjct: 301 GHTAAAFERFMEMQNAGFRPNHITFLCLVTACSHAGLVDEGKRYFSLMKDYGIEPQAEHY 360
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S++D+ + G I+ A + + M + S W A++M + +A A +++ + G
Sbjct: 361 ASMVDLLGRVGRIKEALDLIESMPMEPPESVWGALLMSCRIFKDADTAEIAAKRLFETGS 420
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + + T + ID A + +D G+ L AG E +
Sbjct: 421 RSSGAHMLLSSTYAAAGRHIDAALA--RKAMRDAGV-----RKETGLSWLEAAG---EVH 470
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
F+SN CR H+ E KV EK+
Sbjct: 471 TFVSN----------------CRRHQRSEEIYKVLEKV 492
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 16/284 (5%)
Query: 59 KGKEIHGYAIRHG-----LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA-ISWNS 112
KG+++HG+ ++ G ++ +G L+ YA+CA + S R F LP + +W+S
Sbjct: 27 KGQQLHGHLLKAGHVPATASSHTLLGHHLLTFYARCALPDLSLRAFLDLPAPPSPAAWSS 86
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK----QLHGCI 168
+I+ QNGL FR+ML A + + S A A TL LHG
Sbjct: 87 LISSFAQNGLAAAAFDTFRRMLAAGVPATDRNIPSAAKAVAAAETLSRPPFAPHALHGLA 146
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
+ F ++F+ S++LDMYAKCG++ AR +FD+M ++VSW+A+I G A G A+
Sbjct: 147 AKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGMHPAAM 206
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+F ++ V N +++ C+ A L + TK A F + V+ +
Sbjct: 207 GIFRLALEEAVPVNDFTVSSIIRVCAAATLFELGAQVHARATKTALDASPFVGSSLVS-V 265
Query: 289 LGRAGKLQEAYEFISNMHAGPTEN--VWLTLLSACRVHKNVELA 330
+ G ++ AY + P +N +W +L A H + A
Sbjct: 266 YSKCGLVECAYRVFNE---APEKNLGIWNAVLIASAQHGHTAAA 306
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/542 (37%), Positives = 313/542 (57%), Gaps = 32/542 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D WN +I G + + E +L + ++M + +++T S+L ++ + + +IH
Sbjct: 108 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIH 167
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSII---------- 114
+ G + +V +SLIN YA + +H LF +P DA+SWNS+I
Sbjct: 168 AQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMD 227
Query: 115 ---------------------AGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+G VQ G+ E L+ F +M + ++P +VS ++ + ACA
Sbjct: 228 IALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACA 287
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L GK +H + + + + L+DMYAKCG++ A +F + + +WTA
Sbjct: 288 QLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTA 347
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A HG+ +AIS F +M+K G+KPN + F VLTACS+ GL+++ F +M +DY
Sbjct: 348 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDY 407
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ P+ EHY V DLL RAG L EA FI M P +W LL ACR+HKN+EL ++
Sbjct: 408 NLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 467
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
E + IDP + G YV +N +A ++W AA R M+ +G+ K P CS I ++ +
Sbjct: 468 GEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 527
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPD-TKEVLHDVEEEQKKNLLYYHSERLAI 452
F+AGD+SHP +I K + ++E+ GYVP+ +L V++++++ +++ HSE+LAI
Sbjct: 528 FLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAI 587
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
+G+I T GTTIRI+KNLRVC DCH K ISKI +R+I++RD +RFHHF DGKCSCGD
Sbjct: 588 TYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 647
Query: 513 YW 514
YW
Sbjct: 648 YW 649
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +SW T+I G + G+++EAL + +M N +++PD+ +L++ L A + +G
Sbjct: 236 MVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 295
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y + + + +G LI+MYAKC + ++ +F + K +W ++I+G +
Sbjct: 296 KWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYH 355
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F +M IKP ++F++++ AC++ + GK + + R+ +
Sbjct: 356 GHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEH 415
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ ++ G + A+ +M L + V W A++ +H N
Sbjct: 416 YGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 460
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/515 (37%), Positives = 310/515 (60%), Gaps = 9/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G A+NG +N+ R++ V + + + +++L + V
Sbjct: 200 MPKRNVVSWTAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDA 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ H + A C ++++ + + V+ + +F + +D +W+++I QN
Sbjct: 256 AELFNAMPEHPVAA--C--NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQN 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FR+ML ++P + S SI+ CA L L G+++H ++R FD ++F
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ MY KCGN+ A+ +F + DIV W ++I G A HG A+ +F M G+
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + ++ LTACS+ G + + FNSMT + I P EHY+ + DLLGR+G ++EA++
Sbjct: 432 PDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFD 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P +W L+ ACR+H+N E+A A+K+ ++P N G YV+LS+ Y + R
Sbjct: 492 LIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK-SHPFYHRINEALKELLERME 419
W+DA+ +R F+ ++ + K+P CSWIE + + F +GD +HP + I L++L +
Sbjct: 552 WEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLM 611
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY D VLHD++EEQK + L YHSER A+ +G++ P+G IR++KNLRVCGDCH+
Sbjct: 612 ESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHS 671
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK I+KI REI++RD +RFHHF+DG CSC DYW
Sbjct: 672 AIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 65/279 (23%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ S+N ++ G RN L + AL + R+M + +L A Y +I G
Sbjct: 43 MPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL--------------ASYNALISG 88
Query: 61 KEIHGYAIRHGLDANVCIG--------SSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
+ + A I +SL+ Y + + D+ RLF +P ++ +S+
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++ G + G +E + F +M
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMP-------------------------------------- 170
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
D ++ +++L Y + G I AR +FD+M ++VSWTA+I G A +G + A LFE
Sbjct: 171 -DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
M + N V++ A+L AG ++ A FN+M +
Sbjct: 230 VMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPE 264
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 126/256 (49%), Gaps = 18/256 (7%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VS+ +++ G R+GL +A+ + +QM N + L +L D V + + +
Sbjct: 112 VVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLL----DAGRVNEARRL-- 165
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
D +V +++++ Y + R+ ++ LF +P ++ +SW ++I+G QNG +
Sbjct: 166 --FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNL 223
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SSLL 184
K F M + VS+++++ + + G + N ++ A ++++
Sbjct: 224 ARKLFEVM----PERNEVSWTAML-----VGYIQAGHVEDAAELFNAMPEHPVAACNAMM 274
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+ + G + A+ +F+KM D +W+A+I + +A+S F +M GV+PN
Sbjct: 275 VGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334
Query: 245 AFVAVLTACSHAGLID 260
+ +++LT C+ ++D
Sbjct: 335 SVISILTVCAALAVLD 350
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/515 (37%), Positives = 312/515 (60%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D+ S+N+++ L +G EA ++++M + + DS T SVL + A D+ G
Sbjct: 189 VPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLG 248
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+IH ++ GL +V + S+LI+ Y KC V ++ + F L ++ ++W +++ +QN
Sbjct: 249 LQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQN 308
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F+E L F +M + +P +F+ ++ ACA L L G LHG I+ +GF +++ +
Sbjct: 309 GHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVG 368
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+K GNI + +F M D+++W A+I G + HG A+ +F+ M G
Sbjct: 369 NALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGEC 428
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ VL+AC H L+ + + YF+ + K + + P EHY + LLGRAG L EA
Sbjct: 429 PNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAEN 488
Query: 301 FISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
F+ + V W TLL+AC +H+N L ++ E + +DP+++G Y +LSN +A AR
Sbjct: 489 FMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKAR 548
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W +R M+ + +KK P SW++++N + FV+ +HP +I E +++LL ++
Sbjct: 549 KWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIK 608
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY PD VLHDVE+EQK+ L +HSE+LA+ +G++ P IRIIKNLR+C DCH
Sbjct: 609 PLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHI 668
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K ISK R IIVRD +RFHHF +G C+C D+W
Sbjct: 669 AVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 169/310 (54%), Gaps = 10/310 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLK-PDSFTLSSVLPIFADYVDVIK 59
M ++VSW+ +++G G E L + R + +++ P+ + + VL AD V +
Sbjct: 87 MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+ HGY ++ GL + + ++LI+MY++C V+ + ++ +P D S+NSI++ V+
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G E + ++M+ + V++ S++ CA + L LG Q+H +++ G ++F+
Sbjct: 207 SGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFV 266
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+S+L+D Y KCG + AR FD + ++V+WTAV+ +G+ + ++LF +ME +
Sbjct: 267 SSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDT 326
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL----GRAGKL 295
+PN F +L AC A L+ A + + + F+++ V + L ++G +
Sbjct: 327 RPNEFTFAVLLNAC--ASLVALA---YGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNI 381
Query: 296 QEAYEFISNM 305
+Y SNM
Sbjct: 382 DSSYNVFSNM 391
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 108/200 (54%), Gaps = 4/200 (2%)
Query: 60 GKEIHGYAI---RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
GK IH + + D+++ +SLIN+Y+KC + + + +LF + ++ +SW++++ G
Sbjct: 42 GKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMG 101
Query: 117 CVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
+ G E L FR ++ + P F+ ++ CA + GKQ HG ++++G
Sbjct: 102 YLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLL 161
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++ ++L+ MY++C ++ A I D + D+ S+ +++ G +A + ++M
Sbjct: 162 HQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMV 221
Query: 236 KDGVKPNSVAFVAVLTACSH 255
+ V +SV +V+VL C+
Sbjct: 222 DECVIWDSVTYVSVLGLCAQ 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 133 MLIAKIKPRHVSFSSIMPACAHLT-------------TLHLGKQLHG-CIIRNGF--DDN 176
ML+ K+ +FS +P L +L GK +H ++RN D +
Sbjct: 1 MLVLKLPRVTPAFSMYLPHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSD 60
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-E 235
+ +SL+++Y+KCG + AR +FD+M ++VSW+A++MG G + + LF +
Sbjct: 61 ITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVS 120
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKA 262
D PN F VL+ C+ +G + +
Sbjct: 121 LDSAYPNEYIFTIVLSCCADSGRVKEG 147
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 310/515 (60%), Gaps = 9/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G A+NG +N+ R++ V + + + +++L + V
Sbjct: 200 MPKRNVVSWTAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDA 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ H + A C ++++ + + V+ + +F + +D +W+++I QN
Sbjct: 256 AELFNAMPEHPVAA--C--NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FR+ML ++P + S SI+ CA L L G+++H ++R FD ++F
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ MY KCGN+ A+ +F + DIV W ++I G A HG A+ +F M G+
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + ++ LTACS+ G + + FNSMT + I P EHY+ + DLLGR+G ++EA++
Sbjct: 432 PDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFD 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P +W L+ ACR+H+N E+A A+K+ ++P N G YV+LS+ Y + R
Sbjct: 492 LIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK-SHPFYHRINEALKELLERME 419
W+DA+ +R F+ ++ + K+P CSWIE + + F +GD +HP + I L++L +
Sbjct: 552 WEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLM 611
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY D VLHD++EEQK + L YHSER A+ +G++ P+G IR++KNLRVCGDCH+
Sbjct: 612 ESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHS 671
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK I+KI REII+RD +RFHHF+DG CSC DYW
Sbjct: 672 AIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 65/279 (23%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ S+N ++ G RN L + AL + R+M + +L A Y +I G
Sbjct: 43 MPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL--------------ASYNALISG 88
Query: 61 KEIHGYAIRHGLDA--------NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
+ + A +V +SL+ Y + + D+ RLF +P ++ +S+
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++ G + G +E + F +M
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMP-------------------------------------- 170
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
D ++ +++L Y + G I AR +FD+M ++VSWTA+I G A +G + A LFE
Sbjct: 171 -DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
M + N V++ A+L AG ++ A FN+M +
Sbjct: 230 VMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPE 264
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 126/256 (49%), Gaps = 18/256 (7%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VS+ +++ G R+GL +A+ + +QM N + L +L D V + + +
Sbjct: 112 VVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLL----DAGRVNEARRL-- 165
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
D +V +++++ Y + R+ ++ LF +P ++ +SW ++I+G QNG +
Sbjct: 166 --FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNL 223
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SSLL 184
K F M + VS+++++ + + G + N ++ A ++++
Sbjct: 224 ARKLFEVM----PERNEVSWTAML-----VGYIQAGHVEDAAELFNAMPEHPVAACNAMM 274
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+ + G + A+ +F+KM D +W+A+I + +A+S F +M GV+PN
Sbjct: 275 VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334
Query: 245 AFVAVLTACSHAGLID 260
+ +++LT C+ ++D
Sbjct: 335 SVISILTVCAALAVLD 350
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 310/515 (60%), Gaps = 9/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I G A+NG +N+ R++ V + + + +++L + V
Sbjct: 200 MPKRNVVSWTAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDA 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ H + A C ++++ + + V+ + +F + +D +W+++I QN
Sbjct: 256 AELFNAMPEHPVAA--C--NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L FR+ML ++P + S SI+ CA L L G+++H ++R FD ++F
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+ MY KCGN+ A+ +F + DIV W ++I G A HG A+ +F M G+
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + ++ LTACS+ G + + FNSMT + I P EHY+ + DLLGR+G ++EA++
Sbjct: 432 PDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFD 491
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I NM P +W L+ ACR+H+N E+A A+K+ ++P N G YV+LS+ Y + R
Sbjct: 492 LIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGR 551
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK-SHPFYHRINEALKELLERME 419
W+DA+ +R F+ ++ + K+P CSWIE + + F +GD +HP + I L++L +
Sbjct: 552 WEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLM 611
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY D VLHD++EEQK + L YHSER A+ +G++ P+G IR++KNLRVCGDCH+
Sbjct: 612 ESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHS 671
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK I+KI REII+RD +RFHHF+DG CSC DYW
Sbjct: 672 AIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 65/279 (23%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP+ S+N ++ G RN L + AL + R+M + +L A Y +I G
Sbjct: 43 MPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL--------------ASYNALISG 88
Query: 61 KEIHGYAIRHGLDANVCIG--------SSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
+ + A I +SL+ Y + + D+ RLF +P ++ +S+
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++ G + G +E + F +M
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMP-------------------------------------- 170
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
D ++ +++L Y + G I AR +FD+M ++VSWTA+I G A +G + A LFE
Sbjct: 171 -DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
M + N V++ A+L AG ++ A FN+M +
Sbjct: 230 VMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPE 264
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 126/256 (49%), Gaps = 18/256 (7%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+VS+ +++ G R+GL +A+ + +QM N + L +L D V + + +
Sbjct: 112 VVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLL----DAGRVNEARRL-- 165
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
D +V +++++ Y + R+ ++ LF +P ++ +SW ++I+G QNG +
Sbjct: 166 --FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNL 223
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SSLL 184
K F M + VS+++++ + + G + N ++ A ++++
Sbjct: 224 ARKLFEVM----PERNEVSWTAML-----VGYIQAGHVEDAAELFNAMPEHPVAACNAMM 274
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+ + G + A+ +F+KM D +W+A+I + +A+S F +M GV+PN
Sbjct: 275 VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334
Query: 245 AFVAVLTACSHAGLID 260
+ +++LT C+ ++D
Sbjct: 335 SVISILTVCAALAVLD 350
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 303/510 (59%), Gaps = 2/510 (0%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
LV+ N I +R GL+ AL + +M L+ D +TL +L A
Sbjct: 9 LVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHAL 68
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
L +++ + ++L++ YAK +R+ + +F +P +D ++W S++ G + G
Sbjct: 69 LLRAG-LASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGL 127
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD 185
++ +R M+ A + + ++++ +CA T L LG+ +H +R+G + + + +SL+
Sbjct: 128 AVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVS 187
Query: 186 MYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVA 245
MYAK G++R AR +FD M ++WTA+I+G A +G ++++++ M + G +P+ V
Sbjct: 188 MYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVT 247
Query: 246 FVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
FV +L ACSHAGL+D ++F SM ++GI+P +HYA + DLLGRAG+L EA + +
Sbjct: 248 FVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRS 307
Query: 306 HAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
A + VW LL+ACR H+N LA + A ++ +DP + YV+LSN Y+ ARRW D
Sbjct: 308 PAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDV 367
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A +R MR++G+ K P CSW+ V + F AGD+ H I +E+ R+ G+V
Sbjct: 368 ARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHV 427
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT+ L D E ++ L +H ERLA+ FG++ P IR+ KNLRVCGDCH AIK +
Sbjct: 428 PDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMV 487
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+++ REII+RD++ FHH +DG CSCGDYW
Sbjct: 488 AEVYGREIILRDSNCFHHMKDGSCSCGDYW 517
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V+W +++ GLAR G + A+ R M + D F +++VL A + G
Sbjct: 104 MPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELG 163
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H A+R G + + +G+SL++MYAK + D+ +F + + AI+W ++I G QN
Sbjct: 164 RSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQN 223
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFI 179
G E L + M + +P +V+F ++ AC+H L G+ +G
Sbjct: 224 GRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDH 283
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH--DIVSWTAVIMGNALHGNA 224
+ ++D+ + G + A + D+ D W A++ H NA
Sbjct: 284 YACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNA 330
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/478 (40%), Positives = 298/478 (62%)
Query: 37 LKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSH 96
L+ D T +SV+ A D+ G+ +H I G + + +G++LINMY++C + +
Sbjct: 6 LRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDVPDKAI 65
Query: 97 RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLT 156
+F + K + W ++IA Q G E L+ F++M I ++ V+FS ++ CA+L
Sbjct: 66 EVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLA 125
Query: 157 TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIM 216
L + LH + + +M + ++L++MY KCG + AR +F+KM D+VSWT++I
Sbjct: 126 ALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSIIA 185
Query: 217 GNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIA 276
A G+A A LF M++ G ++V FV V++ C+HAGL+ A ++F SM +DYG++
Sbjct: 186 AYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGLS 245
Query: 277 PSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEK 336
P E+YA + DLLGR G+LQ+ + + NM P W++ L+AC+VHK+++ + A++
Sbjct: 246 PVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKDMKRGVRAAQR 305
Query: 337 IFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVA 396
+ ++ N +YV+LS+ +A ++ AA LR + KK P SWIE+K+K + F +
Sbjct: 306 LVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFAS 365
Query: 397 GDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGI 456
G ++HP I L+ L M + GYVPDT+ VL DVEEE+K+ +L YHSE+ A+ FG+
Sbjct: 366 GSRTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGL 425
Query: 457 ICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
I TP GT +R++KNLRVC DCHTA KFISKI R+I VRD +RFH F+DG CSC DYW
Sbjct: 426 ISTPSGTPLRVVKNLRVCTDCHTATKFISKITGRQITVRDANRFHEFKDGFCSCKDYW 483
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+V W +I ++ G EAL + ++M ++ D S VL + A+ + + + +H
Sbjct: 76 VVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQARILHA 135
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDE 125
L+ ++ + ++L+NMY KC ++ ++ ++F + KD +SW SIIA Q G
Sbjct: 136 TVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSIIAAYAQQGSASA 195
Query: 126 GLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFIASSLL 184
+ F M A V F +M C H L + ++++ G + +L
Sbjct: 196 AFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPVNENYACIL 255
Query: 185 DMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
D+ + G ++ + + M L D ++W + + +H + + +++ + + NS
Sbjct: 256 DLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKDMKRGVRAAQRLVQLN-RRNS 314
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
++V + + G D A + +D G
Sbjct: 315 ASYVLLSDIHAVCGKFDAAAKLRRRIGRDCG 345
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 283/442 (64%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D NV + +++ AKC +E++ LF + K+ ISW+++I G ++ G + E L+ F
Sbjct: 224 DKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNV 283
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M +I+PR SS++ ACA+L L G+ +H + N + + ++L+DMYAKCG
Sbjct: 284 MQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGR 343
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ +A +F+KM+ ++ +W A+I G +HG A DAI LF +M+K +PN + + VL+A
Sbjct: 344 LDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSA 403
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
C+H+G++D+ FNSM + YGI P EHY V DLLGRAG L EA E + +M P+
Sbjct: 404 CAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAA 463
Query: 313 VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
VW LL ACR H +VEL +V + + ++P N G Y +LSN YA A RW D A++R M+
Sbjct: 464 VWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMK 523
Query: 373 NKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLH 432
+G+K + S I+ + F GD SHP I LK +++R++ EG+ P+T +VL
Sbjct: 524 ERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLF 583
Query: 433 DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREI 492
D+EEE+K+ L YHSE+LAI FG+I T GTTI ++KNLR+C DCH+A K IS++ REI
Sbjct: 584 DIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREI 643
Query: 493 IVRDNSRFHHFEDGKCSCGDYW 514
IVRD +R+HHF+ G CSC D+W
Sbjct: 644 IVRDRARYHHFKTGTCSCKDFW 665
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +SW+ +I G + G Y+EAL + M ++P F LSSVL A+ + +G
Sbjct: 253 MKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQG 312
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH Y + + +G++L++MYAKC R++ + +F + K+ +WN++I G +
Sbjct: 313 RWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMH 372
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMFI 179
G ++ ++ F +M K +P ++ ++ ACAH + G ++ + G + M
Sbjct: 373 GRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEH 432
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
++D+ + G + A + M + + W A++ HG+
Sbjct: 433 YGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGD 477
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 14/266 (5%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAK--CARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K++H A+R G + + +L+ YA + + + ++F +P + +N II GC+
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QN + + + +M+IA +P ++ ++ AC G Q+H +I+ G ++
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I S+ + MY G + AR + + D++ + A+I G G A LF ME
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKN 226
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V +V +++ + G+I++A FN M + I+ ++A+ D + G +EA
Sbjct: 227 VGSWNV----MVSGMAKCGMIEEARELFNEMKEKNEIS-----WSAMIDGYIKGGYYKEA 277
Query: 299 YEFISNMHAG---PTENVWLTLLSAC 321
E + M P + V ++L+AC
Sbjct: 278 LEVFNVMQREEIRPRKFVLSSVLAAC 303
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK--CGNIRLARCIFDKMDLHDIVSWTA 213
T+LH KQ+H +R G + +++ +L+ YA N+ A +F+ + ++ +
Sbjct: 41 TSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNI 100
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+I G + AI + +M +PN + + AC+
Sbjct: 101 IIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACT 141
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 292/490 (59%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
+L I M ++ PDS T +VL A D GK IHG I+ G +V ++L++
Sbjct: 73 SLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVH 132
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+Y C + D+ +LF +P ++A++WN++I G N F + + FR ML +P +
Sbjct: 133 LYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERT 192
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++ AC+HL + GK +H I N N+F+ ++L+DMYAKCG + +F+++
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIR 252
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++ +W +I G A++G A+ F +M + KP+ V F+ VL AC H GL+ +
Sbjct: 253 EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
F SM + +G+ P EHY + DLLGRAG L+EA E I +M P +W LL ACRVH
Sbjct: 313 QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVH 372
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
N +L + +++ ++PNN YV+LSN Y+ RRW + LR M +G++K P CS
Sbjct: 373 GNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSS 432
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
IE+ N Y FVA + P + I + L L++++++ GYV T L+D+E+E+K++ +
Sbjct: 433 IEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVM 492
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
YHSE+LA+ FG++ +P T+RI+KNLR+C DCH K +S + +R I+VRD +RFHHF
Sbjct: 493 YHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFY 552
Query: 505 DGKCSCGDYW 514
+G CSC DYW
Sbjct: 553 EGFCSCRDYW 562
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 2/226 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+WN +I G N + +A++ R M +P T+ VL + +G
Sbjct: 150 MPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQG 209
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH + + L NV +G++LI+MYAKC V + ++F + K+ +WN +I+G N
Sbjct: 210 KWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMN 269
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFI 179
G D L+ F +ML+ KP V+F ++ AC H + G+ Q + G +
Sbjct: 270 GQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEH 329
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
++D+ + G + A + M + D + W A++ +HGN
Sbjct: 330 YGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 292/490 (59%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
+L I M ++ PDS T +VL A D GK IHG I+ G +V ++L++
Sbjct: 73 SLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVH 132
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+Y C + D+ +LF +P ++A++WN++I G N F + + FR ML +P +
Sbjct: 133 LYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERT 192
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++ AC+HL + GK +H I N N+F+ ++L+DMYAKCG + +F+++
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIR 252
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
++ +W +I G A++G A+ F +M + KP+ V F+ VL AC H GL+ +
Sbjct: 253 EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
F SM + +G+ P EHY + DLLGRAG L+EA E I +M P +W LL ACRVH
Sbjct: 313 QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVH 372
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
N +L + +++ ++PNN YV+LSN Y+ RRW + LR M +G++K P CS
Sbjct: 373 GNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSS 432
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
IE+ N Y FVA + P + I + L L++++++ GYV T L+D+E+E+K++ +
Sbjct: 433 IEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVM 492
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
YHSE+LA+ FG++ +P T+RI+KNLR+C DCH K +S + +R I+VRD +RFHHF
Sbjct: 493 YHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFY 552
Query: 505 DGKCSCGDYW 514
+G CSC DYW
Sbjct: 553 EGFCSCRDYW 562
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 2/226 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + V+WN +I G N + +A++ R M +P T+ VL + +G
Sbjct: 150 MPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQG 209
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH + + L NV +G++LI+MYAKC V + ++F + K+ +WN +I+G N
Sbjct: 210 KWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMN 269
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK-QLHGCIIRNGFDDNMFI 179
G D L+ F +ML+ KP V+F ++ AC H + G+ Q + G +
Sbjct: 270 GQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEH 329
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNA 224
++D+ + G + A + M + D + W A++ +HGN
Sbjct: 330 YGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/512 (38%), Positives = 296/512 (57%), Gaps = 31/512 (6%)
Query: 34 NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYA------ 87
N NL PD++T + ++ A + G +HG I+HG + + + + L+ MYA
Sbjct: 105 NNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLS 164
Query: 88 -------------------------KCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
KC ++ + ++F +P +D ++WN++IAG Q G
Sbjct: 165 SCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGR 224
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L F M + +K VS ++ AC HL L G+ +H + R + + ++
Sbjct: 225 SREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTA 284
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+DMYAKCGN+ A +F M ++ +W++ I G A++G +++ LF M+++GV+PN
Sbjct: 285 LVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPN 344
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
+ F++VL CS GL+++ +F+SM YGI P EHY + D+ GRAG+L+EA FI
Sbjct: 345 GITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFI 404
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
++M P W LL ACR++KN EL KI ++ N GAYV+LSN YA + W+
Sbjct: 405 NSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWE 464
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+SLR M+ KG+KK P CS IEV + + F+ GDKSHP Y I L+E+ + + G
Sbjct: 465 SVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSG 524
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
YV +T VL D+EEE+K++ L HSE++AI FG+I IR++ NLR+C DCH K
Sbjct: 525 YVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAK 584
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
ISKI REIIVRD +RFHHF+DG+CSC DYW
Sbjct: 585 MISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 4/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+WN +I G A+ G EAL++ M +K + ++ VL + G
Sbjct: 204 MPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHG 263
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H Y R+ + V +G++L++MYAKC V+ + ++F + ++ +W+S I G N
Sbjct: 264 RWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMN 323
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMF 178
G +E L F M ++P ++F S++ C+ + + G++ H +RN G +
Sbjct: 324 GFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRK-HFDSMRNVYGIGPQLE 382
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIV-SWTAVIMGNALHGN 223
++DMY + G ++ A + M + V +W+A++ ++ N
Sbjct: 383 HYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKN 428
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 316/556 (56%), Gaps = 46/556 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V WNT++ GL +N ++EA+ I M + DS T+++VLP A+ D+ G I
Sbjct: 171 DTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQ 230
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A++ G ++ + + L +Y+KC +E + LF + D +S+N++I+G N +
Sbjct: 231 CLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETE 290
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
++ F+++L++ K S ++P LHL + +HG ++G N ++++L
Sbjct: 291 SSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALT 350
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN-- 242
+Y++ I AR +FD+ + SW A+I G A +G AISLF++M+K V+PN
Sbjct: 351 TVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPV 410
Query: 243 --------------------------------------------SVAFVAVLTACSHAGL 258
V F++VL ACSHAGL
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRESFESNIFMLHSRVSPTGVTFLSVLYACSHAGL 470
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLL 318
+ + F SM D+G P EHYA + DLLGRAG L +A +FI M P VW LL
Sbjct: 471 VREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALL 530
Query: 319 SACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKK 378
AC +HK+ LA ++K+F +DP N+G YV+LSN Y+A + + +AAS+R ++ + + K
Sbjct: 531 GACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAK 590
Query: 379 TPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ 438
TP C+ IEV N + F +GD+SHP I L++L +M + G+ +T LHDVEEE+
Sbjct: 591 TPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEE 650
Query: 439 KKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNS 498
K+ ++ HSE+LAI FG+I + GT IRIIKNLRVC DCH A KFISKI +R I+VRD +
Sbjct: 651 KELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDAN 710
Query: 499 RFHHFEDGKCSCGDYW 514
RFHHF+DG CSCGDYW
Sbjct: 711 RFHHFKDGICSCGDYW 726
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 134/251 (53%), Gaps = 4/251 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P DL +N +I + N A+++ + + L+PD+FT + V+ + +
Sbjct: 68 IPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVI---SGASSLGL 124
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +H ++I G +++ +GS+++ Y K +RV + ++F + +D + WN++++G V+
Sbjct: 125 GLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVK 184
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N FDE + F M+ I + ++++P A L L LG + ++ GF + ++
Sbjct: 185 NSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ L +Y+KCG I AR +F ++ D+VS+ A+I G + ++ LF+++ G
Sbjct: 245 ITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE 304
Query: 240 KPNSVAFVAVL 250
K NS + V ++
Sbjct: 305 KVNSSSIVGLI 315
>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 311/515 (60%), Gaps = 8/515 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+ SWNT+I A+NG EAL++ G + ++PD T +VL D+ +G+ IH
Sbjct: 278 DVCSWNTMIAAFAKNGHVFEALDL---YGRMTIRPDGVTFVNVLEACDCPDDLERGESIH 334
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A HG D+++ + ++L++MY +C R++ + +F + I+ N+IIA Q G D
Sbjct: 335 RDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRAD 394
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFD---DNMFIA 180
L FRQML I+P + +++ ACA + LH + D ++ +
Sbjct: 395 GSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVR 454
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAKCG++ AR IFD ++ +W A++ G A HG A A+ L +M+ G+
Sbjct: 455 NALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGIS 514
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ ++F A L+A SHA ++ F ++++DYG+ PS EHY AV DLLGRAG L+EA
Sbjct: 515 PDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEG 574
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
F+ +M W+ LL ACR+HK+ + A + AE I IDP++ +Y +LSN Y+AA R
Sbjct: 575 FLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGR 634
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME- 419
W +A +R M G +K P SWIEVKN+ + F D+SHP I E L EL ++
Sbjct: 635 WDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKS 694
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+E YVPD VLHDVE+E ++NLL++HSE+LA+ FG+I T +G+ I IIKNLR+C DCH
Sbjct: 695 EEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHV 754
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K SK +REI+VRD RFHHF G CSC D W
Sbjct: 755 VMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 156/313 (49%), Gaps = 14/313 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VSWN VI A+ G + +L ++M PD+ S++ + +G
Sbjct: 73 MPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGT---IQEG 129
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + +A + G D + +G++LI MY +C R++ + F + + +SWN++I +
Sbjct: 130 EIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRG 189
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSF----SSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
++ L+ FR+ML+ I P V+ S++ A +TT G +H C I +G
Sbjct: 190 DEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTC--GNLIHACSIDSGLISV 247
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+A+S+++++ + GNI A IF+K+D D+ SW +I A +G+ +A+ L+ +M
Sbjct: 248 TTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT- 306
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
++P+ V FV VL AC +++ S + +G A+ + R G+L
Sbjct: 307 --IRPDGVTFVNVLEACDCPDDLERGESIHRD-ARAHGYDSDLIVATALVSMYRRCGRLD 363
Query: 297 EAYE-FISNMHAG 308
A E F + H G
Sbjct: 364 RAAEVFAAIQHPG 376
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 5/263 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G++IH I G ++ + + L++MYA+ D+ L +P ++A+SWN++I
Sbjct: 30 QGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANA 89
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G F L FF++ML P V F S++ A T+ G+ + ++GFD +
Sbjct: 90 QAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPG---TIQEGEIVQDFAKKSGFDRSFV 146
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MY +CG + A+ FD++ +VSW A+I + ++ +F +M G
Sbjct: 147 VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQG 206
Query: 239 VKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ PN+V + + +A + A I + ++ + D G+ ++ +L GR G +
Sbjct: 207 IAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISR 266
Query: 298 AYEFISNMHAGPTENVWLTLLSA 320
A E + + W T+++A
Sbjct: 267 ANEIFEKVDQRDVCS-WNTMIAA 288
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
T+L G+++H +I +G+ D++F+++ LL MYA+ + R A + D+M + VSW AVI
Sbjct: 26 TSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVI 85
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
NA G+ ++ F++M +DG P++V F++++ A G I + K G
Sbjct: 86 RANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGTIQEG-EIVQDFAKKSGF 141
Query: 276 APSFEHYAAVADLLGRAGKLQEAYE 300
SF A+ + GR G+L A +
Sbjct: 142 DRSFVVGTALIGMYGRCGRLDRAKD 166
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 309/523 (59%), Gaps = 15/523 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMG------------NVNLKPDSFTLSSVLPIFA 52
++VS+N +I G ++GL EAL + R M N++++P+ T++ LP A
Sbjct: 489 NVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACA 548
Query: 53 DYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D +GKEIHGY +R+G + N+ + S+L++MYAKC ++ ++++F + ++ +SWN+
Sbjct: 549 DLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNA 608
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
++AG + N +E LK F +ML ++P ++F + PAC + + G+ LHG +
Sbjct: 609 LMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQ 668
Query: 173 FDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
D+ I S+L+DMYAKCG+I A+ +FD D+ W A+I ++HG A +A ++F
Sbjct: 669 LDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVF 728
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
QME G+ P+ + FV++L+AC+ GL+++ W YFNSM YG+A + EHY + +LG
Sbjct: 729 XQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGG 788
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG L EA +FI M P +W TLL ACRVH N E+ + A+ +F ++P+N Y++L
Sbjct: 789 AGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLL 848
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN Y ++ W A +LR FMR + + CS++ V + F G+ SHP I E
Sbjct: 849 SNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEEILETW 908
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
L +ME GY P + + D EE++ H+E+LAI FGII + + + KN+
Sbjct: 909 DXLARKMELSGYFP--LDPVFDDEEKELDPFSCLHTEKLAICFGIISSNXYRPVHVSKNI 966
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
R+C DCHT+ K ISKI REI V+D +HH +DG C C D W
Sbjct: 967 RMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 32/307 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSW +I GL +EA +I M +KPD + S++L FA ++
Sbjct: 244 MQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLA 303
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E GL V SWN II+GCVQN
Sbjct: 304 LETLEEMPERGLQPTVN-------------------------------SWNGIISGCVQN 332
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ L F +ML P ++ +SI+PAC L L LGK +H ++G N+++
Sbjct: 333 GYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVE 392
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S++DMY+KCG+ A +F K + + W +I G DA+ L M+KDG K
Sbjct: 393 GSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWK 452
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + + +L+ + GL +A + M + G+ P+ + + ++G EA +
Sbjct: 453 PDVITYNTILSGHARNGLKTQAXELLSEMVQ-MGLKPNVVSFNVLISGFQQSGLSYEALK 511
Query: 301 FISNMHA 307
M +
Sbjct: 512 VFRIMQS 518
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 140/278 (50%), Gaps = 6/278 (2%)
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCA-RVEDSHRLFCLLPVKDAISWNSIIAGCV 118
++IH ++ + L IG+ L+ +Y K +ED+ +L +P + ++ ++I
Sbjct: 100 RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
++ +DE FR M+ + P +I+ AC+ + +GK +HG +IR + ++F
Sbjct: 160 RSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVF 219
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ Y+ CG++ +R +F M D+VSWTA+I G +A +F M+ DG
Sbjct: 220 VGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDG 279
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ +++ A+L+ + G ID A M + G+ P+ + + + G L++A
Sbjct: 280 VKPDLISWSALLSGFARNGEIDLALETLEEM-PERGLQPTVNSWNGIISGCVQNGYLEDA 338
Query: 299 YEFISNMHAGPTENVWLT---LLSACRVHKNVELAGKV 333
+ S M P + +T +L AC K + L +
Sbjct: 339 LDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAI 376
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 44/303 (14%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G +NG E+AL++ +M P+ T++S+LP + GK IH A
Sbjct: 321 SWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIA 380
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+HG+ NV + S+I+MY+KC + + ++F K+ WN +IA V G ++ L
Sbjct: 381 XKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDAL 440
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
R M KP +++++I+ A RNG A LL
Sbjct: 441 GLLRSMQKDGWKPDVITYNTILSGHA----------------RNGLKTQ---AXELLSEM 481
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME--KDG------- 238
+ G ++VS+ +I G G +++A+ +F M+ DG
Sbjct: 482 VQMGLKP------------NVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVL 529
Query: 239 ---VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
++PN + L AC+ L + + T G P+ +A+ D+ + +
Sbjct: 530 NLSMRPNPITITGALPACADLNLWCQG-KEIHGYTLRNGFEPNIFVSSALVDMYAKCHDM 588
Query: 296 QEA 298
A
Sbjct: 589 DSA 591
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 312/547 (57%), Gaps = 41/547 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D ++ ++I GL + G +EA I +M ++ T ++++ + V
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDA 222
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I + +S++ Y + R+ED+ LF ++PVK I+ N++I+G Q
Sbjct: 223 RKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQK 278
Query: 121 G-------LFD------------------------EGLKFFRQMLIAKIKPRHVSFSSIM 149
G +FD E L F M ++P + SI+
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
CA L +LH GKQ+H ++R FD ++++AS L+ MY KCG + ++ IFD+ DI+
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDG-VKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
W ++I G A HG +A+ +F +M G KPN V FVA L+ACS+AG++++ + S
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M +G+ P HYA + D+LGRAG+ EA E I +M P VW +LL ACR H ++
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
+A A+K+ I+P N G Y++LSN YA+ RW D A LR M+ + ++K+P CSW EV+
Sbjct: 519 VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Query: 389 NKAYAFVAGD-KSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHS 447
NK +AF G SHP I + L EL + + GY PD LHDV+EE+K N L YHS
Sbjct: 579 NKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHS 638
Query: 448 ERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGK 507
ERLA+ + ++ +G IR++KNLRVC DCHTAIK ISK+ +REII+RD +RFHHF +G+
Sbjct: 639 ERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGE 698
Query: 508 CSCGDYW 514
CSC DYW
Sbjct: 699 CSCKDYW 705
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 19/234 (8%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D N+ + L++ Y K ++++ ++F L+P ++ +SW +++ G V NG D F +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA-SSLLDMYAKCG 191
M + VS++ ++ + L G+ C + D IA +S++ K G
Sbjct: 136 M----PEKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 192 NIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLT 251
+ AR IFD+M +++WT ++ G + DA +F+ M + V++ ++L
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLM 242
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G I+ A F M + P A ++ LG+ G++ +A +M
Sbjct: 243 GYVQNGRIEDAEELFEVMP----VKPVIACNAMISG-LGQKGEIAKARRVFDSM 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 58/288 (20%)
Query: 83 INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
I ++ ++ ++ +LF K SWNS++AG N + + K F +M
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP-------- 75
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
D N+ + L+ Y K G I AR +FD
Sbjct: 76 -------------------------------DRNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M ++VSWTA++ G +G A SLF +M + N V++ +L G ID A
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDA 160
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLG--RAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
K Y + P ++ A + + G + G++ EA E M + + W T+++
Sbjct: 161 -------CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM-SERSVITWTTMVTG 212
Query: 321 CRVHKNVELAGKVAEKIFMIDPNNMG-AYVILSNTYAAARRWKDAASL 367
+ V+ A KIF + P ++ + Y R +DA L
Sbjct: 213 YGQNNRVD----DARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/481 (40%), Positives = 292/481 (60%), Gaps = 8/481 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
PV D+ +W V+ G A+NG+ EEA + M N + + ++++ + + + K
Sbjct: 251 PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAK 306
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ NV ++++ YA+ +E++ +F +P KDA+SW +++A Q G
Sbjct: 307 ELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+E L+ F +M +F+ ++ CA + L G QLHG +IR G+ F+ +
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MY KCGN+ AR F++M+ D+VSW +I G A HG +A+ +F+ M KP
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + V VL ACSH+GL++K SYF SM D+G+ EHY + DLLGRAG+L EA++
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
+ +M P +W LL A R+H+N EL AEKIF ++P N G YV+LSN YA++ +W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
+DA +RV M +G+KK P SWIEV+NK + F AGD HP +I L++L RM++
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GYV T VLHDVEEE+K+++L YHSE+LA+ +GI+ P G IR+IKNLRVCGDCH A
Sbjct: 663 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 722
Query: 482 K 482
K
Sbjct: 723 K 723
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VSW ++ ++ G EE L + +MG + + VL AD + G
Sbjct: 343 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 402
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG IR G +G++L+ MY KC +ED+ F + +D +SWN++IAG ++
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E L+ F M KP ++ ++ AC+H + G + + G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEH 522
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++D+ + G + A + M D W A++ + +H N S E++ +
Sbjct: 523 YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFE-- 580
Query: 239 VKPNSVAFVAVLT 251
++P + +L+
Sbjct: 581 LEPENAGMYVLLS 593
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D VSWN ++ RNG EEA R + N + D + ++++ + + + + +
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 213
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
E+ + G D V + +++ YA+ + ++ RLF PV+D +W ++++G QNG
Sbjct: 214 EL--FDRMPGRD--VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +E + F M + VS+++++ A + K+L + N+ +
Sbjct: 270 MLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWN 321
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
++L YA+ G + A+ +FD M D VSW A++ + G + + + LF +M + G
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 242 NSVAFVAVLTACS 254
N AF VL+ C+
Sbjct: 382 NRSAFACVLSTCA 394
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 34/324 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++N ++ G + NG A ++ R + +PD+++ +++L A +
Sbjct: 64 MPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----RPDNYSYNTLLHALAVSSSLADA 119
Query: 61 KEIHG-YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + +R + NV I S +A V + F L P KDA+SWN ++A V+
Sbjct: 120 RGLFDEMPVRDSVTYNVMISS-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 174
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMF 178
NG +E R + ++ + +S++++M + ++L + R+ N+
Sbjct: 175 NGRVEEA----RGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
++ YA+ G++ AR +FD + D+ +WTAV+ G A +G +A +F+ M +
Sbjct: 231 VSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER- 284
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
N+V++ A++ A ++D+A FN M + + + +AG L+EA
Sbjct: 285 ---NAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGMLEEA 336
Query: 299 YEFISNMHAGPTENV--WLTLLSA 320
M P ++ W +L+A
Sbjct: 337 KAVFDTM---PQKDAVSWAAMLAA 357
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 128/309 (41%), Gaps = 76/309 (24%)
Query: 72 LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFR 131
L+ V + I + + RV D+ RLF +P + ++N+++AG NG FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 132 QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQL---------------------HGCI-- 168
A +P + S+++++ A A ++L + L HG +
Sbjct: 94 ----AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 169 -----------------------IRNG--------FDD----NMFIASSLLDMYAKCGNI 193
+RNG F+ ++ ++L+ Y + G +
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
AR +FD+M D+VSW ++ G A G+ +A LF+ V + AV++
Sbjct: 210 SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGY 265
Query: 254 SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
+ G++++A F++M + ++ + A VA + R + EA E + M P NV
Sbjct: 266 AQNGMLEEARRVFDAMPERNAVSWN----AMVAAYIQRR-MMDEAKELFNMM---PCRNV 317
Query: 314 --WLTLLSA 320
W T+L+
Sbjct: 318 ASWNTMLTG 326
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 319/515 (61%), Gaps = 6/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +VSWN ++ G A+NGL EEAL + +M N ++PD T +V+ + D
Sbjct: 220 MPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLA 279
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + + N + ++L++MYAK ++ + +LF +P ++ ++WNS+IAG QN
Sbjct: 280 ASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQN 339
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G ++ F++M+ AK + P V+ S++ AC HL L LG + + N ++
Sbjct: 340 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++ MY++CG++ A+ +F +M D+VS+ +I G A HG+ +AI+L M++ G+
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 459
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ V F+ VLTACSHAGL+++ F S+ KD P+ +HYA + DLLGR G+L++A
Sbjct: 460 EPDRVTFIGVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGRVGELEDAK 514
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ M P V+ +LL+A R+HK VEL A K+F ++P+N G +++LSN YA+A
Sbjct: 515 RTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAG 574
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RWKD +R M+ G+KKT SW+E K + F+ D+SH I + L EL ++M
Sbjct: 575 RWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMR 634
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY+ D VL DVEEE+K+ ++ HSE+LAI + ++ + G IR++KNLRVC DCHT
Sbjct: 635 EAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHT 694
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISK+ R IIVRDN+RFH F DG CSC DYW
Sbjct: 695 AIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ NV ++++ YAK +E + R F +P + +SWN++++G QNGL +E L+ F +
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 250
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M+ A I+P ++ +++ AC+ L L + + N F+ ++LLDMYAK G+
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGD 310
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLT 251
+ AR +F+ M ++V+W ++I G A +G + AI LF++M + P+ V V+V++
Sbjct: 311 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 370
Query: 252 ACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
AC H G ++ +T++ I S + A+ + R G +++A M
Sbjct: 371 ACGHLGALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 126/294 (42%), Gaps = 52/294 (17%)
Query: 31 QMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCA 90
QM ++PD+F V PI G H + ++ G ++ + +++I+MYA+
Sbjct: 90 QMQGCGVRPDAF----VYPILIKSAGT-GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLG 144
Query: 91 RVEDSHRLFCLLP--VKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+ + ++F +P + WN++++G + + F +
Sbjct: 145 PIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLF----------------DV 188
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
MP + N+ ++++ YAK ++ AR FD M +
Sbjct: 189 MP-----------------------ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV 225
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSW A++ G A +G A +A+ LF++M G++P+ +V V++ACS G A S +
Sbjct: 226 VSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRT 285
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
+ + F A+ D+ + G L A + + M P NV W ++++
Sbjct: 286 LHQKRIQLNCFVR-TALLDMYAKFGDLDSARKLFNTM---PGRNVVTWNSMIAG 335
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 161 GKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGN 218
G H +++ G + F+ ++++DMYA+ G I AR +FD++ ++ + W A++ G
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
+ A LF+ M + N + + A++T + ++ A YF+ M + S
Sbjct: 174 WKWESEGQAQWLFDVMPER----NVITWTAMVTGYAKVKDLEAARRYFDCMPER-----S 224
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNM-HAG--PTENVWLTLLSACRVHKNVELAGKVAE 335
+ A+ + G +EA M +AG P E W+T++SAC + LA +
Sbjct: 225 VVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 336 KI 337
+
Sbjct: 285 TL 286
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/519 (38%), Positives = 321/519 (61%), Gaps = 5/519 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++S+ +++ G + G + AL I +M + P++FT ++V+ + D+ G
Sbjct: 88 MREPNVISFTSLMAGFIKVGRPKSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTG 147
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH + G+ N+ + SSLI+MY KC V+D+ R+F + ++ +SW S+I QN
Sbjct: 148 QKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQN 207
Query: 121 GLFDEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
L + L+ FR+ + P H +S++ ACA L L GK H +IR G + N +
Sbjct: 208 ALGECALQLFREFNGLPLSSPNHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVV 267
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
AS+L+DMYAKCG I + +F ++ ++ +T++I+G A +G ++ +F++M +
Sbjct: 268 ASALVDMYAKCGCIGYSDKVFRRIPDPSVIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRI 327
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KPN V FV VL ACSH+GL+D Y +SM K +G+ P +HY V D+LGR G+L EA+
Sbjct: 328 KPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAH 387
Query: 300 EFISNMHAGPTEN--VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
+ ++ P + +W TLLSA R++ V++A + ++ + + AYV +SNTYA
Sbjct: 388 QLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAVEASKWLIESNQQVAAAYVTMSNTYAM 447
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSH-PFYHRINEALKELLE 416
A +W++ S+R M++ G+ K P CSW+E+++ AY F AGD S + L+EL
Sbjct: 448 AGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAYVFYAGDVSLCARGSEVASLLRELER 507
Query: 417 RMEQEGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
RM++ GYV ++ ++ DVEEE K+ ++ HSERLA+ FG+I P G TIR++KNLR+C
Sbjct: 508 RMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTIRVMKNLRMCR 567
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A K IS+IV+R+ +VRD +RFHHFE+G C+C D+W
Sbjct: 568 DCHEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 606
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 43 TLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL 102
T + ++ D D+ H ++ G + + LIN Y + R D+ +LF +
Sbjct: 29 TKTQLIQRLQDCNDITSVSFSHTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEM 88
Query: 103 PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGK 162
+ IS+ S++AG ++ G L F +ML + + P +F++++ AC+ L L G+
Sbjct: 89 REPNVISFTSLMAGFIKVGRPKSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQ 148
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
++H + G N+ + SSL+DMY KC N+ AR +FD MD ++VSWT++I +
Sbjct: 149 KIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNA 208
Query: 223 NAHDAISLFEQMEKDGV-KPNSVAFVAVLTACSHAG 257
A+ LF + + PN +V+ AC+ G
Sbjct: 209 LGECALQLFREFNGLPLSSPNHFMLASVINACASLG 244
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 310/522 (59%), Gaps = 21/522 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEE-ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP +++SW +I G ++G+ E + + R+M N +++P+ T S++L A+ D
Sbjct: 310 MPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDS 369
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G++IH + ++ + +G++L++MYA+ +E++ + F L + +S + +
Sbjct: 370 GRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERN 429
Query: 120 NGL-------FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
N D+G+ F +F+S++ A A + L G++LH ++ G
Sbjct: 430 NASCSSKIEGMDDGVSTF-------------TFASLLSAAASVGLLTKGQKLHALSMKAG 476
Query: 173 FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE 232
F + I++SL+ MYA+CG + A FD+M H+++SWT++I G A HG A A+S+F
Sbjct: 477 FRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFH 536
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
M GVKPN V ++AVL+ACSH GL+ + +F SM KD+G+ P EHYA + DLL R+
Sbjct: 537 DMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARS 596
Query: 293 GKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILS 352
G ++EA +FI+ M VW TLLSACR + N E+ A + ++P + YV+LS
Sbjct: 597 GLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLS 656
Query: 353 NTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALK 412
N YA A W + A +R MR+K + K SW++V N + F AGD SHP I L
Sbjct: 657 NLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLV 716
Query: 413 ELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLR 472
L+ ++ GYVPDT VLHD+ EE K+ L HSE++A+ FG+I T +RI KNLR
Sbjct: 717 TLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLR 776
Query: 473 VCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
VC DCH+AIK+ISK REII+RD++RFH +DG CSCG+YW
Sbjct: 777 VCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 144/259 (55%), Gaps = 6/259 (2%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTL-SSVLPIFADYVDVIKGK 61
V DLVSW + LARNG E+L ++ +M + L+P++FTL ++ F + + G
Sbjct: 105 VRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGG 164
Query: 62 EIHGYAIRHGL-DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ G+ ++ G +V +G +LI+M+A+ + + R+F L + ++ W +I VQ
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + ++ F ML +P S SS++ AC L ++ LG+QLH +R G + ++
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284
Query: 181 SSLLDMYAKCG---NIRLARCIFDKMDLHDIVSWTAVIMGNALHG-NAHDAISLFEQMEK 236
L+DMYAK ++ AR +F M H+++SWTA+I G G ++ ++LF +M
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344
Query: 237 DGVKPNSVAFVAVLTACSH 255
+ ++PN + + +L AC++
Sbjct: 345 ESIRPNHITYSNLLKACAN 363
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 56 DVIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLF-CLLPVKDAISWNSI 113
D+ G+ +H +R LD + + +SL+ MY+KC VE + R+F + V+D +SW ++
Sbjct: 55 DLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAM 114
Query: 114 IAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHL-GKQLHGCIIRNG 172
+ +NG E L+ +ML ++P + + AC L G + G +++ G
Sbjct: 115 ASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTG 174
Query: 173 F-DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
F ++ + +L+DM+A+ G++ A+ +FD + V WT +I G A + LF
Sbjct: 175 FWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELF 234
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLI 259
M DG +P+ + ++++AC+ G +
Sbjct: 235 LHMLDDGFEPDGYSMSSMISACTELGSV 262
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 304/505 (60%), Gaps = 31/505 (6%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN+ + LA +A+ + ++ ++ PD+FT SSVL + +D+ G+ +HG
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWN----------------- 111
+ G +N+ + + ++++YA C + ++ LF +P +D ++WN
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 112 --------------SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
S+IAG VQ G E + F +M A +K V+ +++ ACA L
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L LG ++H R+GF N+ I+++L+DMY KCG + A +F++M+ +VSW+A+I G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A+HG A +A+ LF M + G++PN V F+ +L ACSH GLI + +F SMT+DYGI P
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
EHY + DLL RAG L EA+EFI NM P VW LL ACRVHKNVE+A + + +
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
+DP N G YV+LSN YA A RW+D A +R FM+++ +KKTP S I V + FVAG
Sbjct: 456 LELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAG 515
Query: 398 DKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGII 457
++SHP +I + +ELLE M +GYVP+T VL D+EE +K + HSE+LA+VFG++
Sbjct: 516 EESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM 575
Query: 458 CTPDGTTIRIIKNLRVCGDCHTAIK 482
TP T IRI+KNLR+C DCH+A +
Sbjct: 576 NTPAETPIRIMKNLRICEDCHSAFQ 600
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 2/229 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++ SW ++I G + G +EA+++ +M +K + T+ +VL AD + G
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG 279
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH Y+ RHG NV I ++LI+MY KC +E++ ++F + + +SW+++I G +
Sbjct: 280 MRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMH 339
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G +E L+ F M I+P V+F ++ AC+H+ + G++ + R+ G +
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEH 399
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDA 227
++D+ ++ G + A M + + V W A++ +H N A
Sbjct: 400 YGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/510 (37%), Positives = 302/510 (59%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L WNT+I G + + A+ + R M + P+S+T VL + + +G+E+H
Sbjct: 71 NLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELH 130
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ GLD + + LI +YA C ++ + +F +P D+ SW+++++G QNG
Sbjct: 131 SQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAV 190
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E LK FR+M + + +S++ C L L LGK +H + + G ++ + ++L+
Sbjct: 191 EALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALV 250
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MY+KCG++ A +F M D+ +W+ +I G A+HG+ A+ LF+ M++ PN V
Sbjct: 251 GMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCV 310
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F +VL+ACSH+GL++K F +M +Y I P +HY + DL RAG + A++FI
Sbjct: 311 TFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQT 370
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +W TLL AC+ H +L ++ KI +DP++ YV++SN YA+ RW
Sbjct: 371 MPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSV 430
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+R M++K KK S IE+ + F+ GD+SHP +I L ++ +++Q G+V
Sbjct: 431 CQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHV 490
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
T +VLHD++EE+K+ L HSERLAI +G++ TP+G+ IRI+KNLRVC DCH IK I
Sbjct: 491 NSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLI 550
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S++ REIIVRD RFHHF + CSC DYW
Sbjct: 551 SEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 121/224 (54%), Gaps = 2/224 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D SW+T++ G A+NG EAL + R+M N+ D+FTL+SV+ + D + G
Sbjct: 168 MPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLG 227
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y + G+ +V +G++L+ MY+KC ++++ ++F + +D +W+++IAG +
Sbjct: 228 KWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIH 287
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
G ++ L+ F M +K P V+F+S++ AC+H + G Q+ + +
Sbjct: 288 GHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKH 347
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHG 222
++D++ + G + A M + ++V W ++ HG
Sbjct: 348 YGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 391
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKC--ARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K I + +R L + + S LI A V +HR+F + WN+II G
Sbjct: 24 KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYS 83
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ + +R M + I P +F ++ AC L L G++LH I++ G D
Sbjct: 84 ISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETP 143
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+ +YA CG + A +FD+M D SW+ ++ G A +G A +A+ LF +M+ +
Sbjct: 144 LVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAEN 203
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V ++ +V+ C G +D + M K+ G+ A+ + + G L A
Sbjct: 204 VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKE-GVKIDVVLGTALVGMYSKCGSLDNA 262
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELA 330
+ M A W T+++ +H + E A
Sbjct: 263 LKVFQGM-AERDVTAWSTMIAGYAIHGHGEKA 293
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/508 (37%), Positives = 300/508 (59%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N +I + + E+ + R+M + P+ + S V+ ++ G +IH +
Sbjct: 136 YNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARIL 195
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
R G ++ + ++L+++Y+ C + E++ ++F +P D +SWN +I+ C+ N + L+
Sbjct: 196 RDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALR 255
Query: 129 FF--RQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
F Q +P V+ ++ ACA+L L G+++H I +G+D + + +SL+ M
Sbjct: 256 MFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITM 315
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y++CG + A IF +MD ++VSW+A+I G A+HG +AI FEQM++ GV P+
Sbjct: 316 YSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTL 375
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
VL+ACSH GL+D +F+ M+K +GI P+ HY + DLLGRAG L +AY+ I +M
Sbjct: 376 TGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMV 435
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W TLL ACR+H++ L +V + + G YV+L N Y++ W
Sbjct: 436 IKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTD 495
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
LR FM+ KG++ +P CS IE+K K + FV D HP I E L E+ ++++ GYV +
Sbjct: 496 LRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAE 555
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
LH++ E+K N L YHSE+LAI FG++ TP GTTIR+ KNLR+C DCH K +S
Sbjct: 556 LSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 615
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RE+++RD +RFHHF +G+CSC YW
Sbjct: 616 AYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 139/299 (46%), Gaps = 12/299 (4%)
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVED--SHRLFCLLPVKDAISWNSIIAGCVQ 119
+IH + IR L N I ++ A + S ++F + +N +I
Sbjct: 86 QIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSM 145
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ ++G +R+M + P +S S +M +C +++L G Q+H I+R+G + +
Sbjct: 146 SHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLL 205
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK--D 237
++L+D+Y+ C A +FD++ D VSW +I + DA+ +F+ M+ D
Sbjct: 206 LTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTAD 265
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G +P+ V + +L AC++ G ++ N + +++G + ++ + R G+L++
Sbjct: 266 GFEPDDVTCLLLLQACANLGALEFGERVHNYI-EEHGYDGALNLCNSLITMYSRCGRLEK 324
Query: 298 AYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKI--FMIDPNNMGAYVILS 352
AY M NV W ++S +H A + E++ + P++ +LS
Sbjct: 325 AYSIFKRMDE---RNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLS 380
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW+ +I G A +G EA+ QM + + PD TL+ VL + V G
Sbjct: 332 MDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDG 391
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+ G++ N+ ++++ + ++ +++L + +K D+ W +++ C
Sbjct: 392 LMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGAC 450
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 306/525 (58%), Gaps = 11/525 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEE-ALNIV-RQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
+P + +NT+I LA + A ++ R + + LKP+ FT S+ +
Sbjct: 66 IPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLR 125
Query: 59 KGKEIHGYAIRH-GLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+ +H + ++ + + ++L+N YAKC +V LF + D SWNSI++
Sbjct: 126 HGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAY 185
Query: 118 VQNG--------LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII 169
V N L E L F +M + IK V+ +++ ACA L L G H ++
Sbjct: 186 VHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVL 245
Query: 170 RNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAIS 229
++ N F+ ++L+DMY+KCG + LA +FD++ D + + A+I G A+HG H A+
Sbjct: 246 KHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALD 305
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL 289
LF++M +G+ P+ V V + +CSH GL+++ F SM + YG+ P EHY + DLL
Sbjct: 306 LFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLL 365
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYV 349
GRAG+L+EA E + NM P +W +LL A RVH N+E+ V + + ++P G YV
Sbjct: 366 GRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYV 425
Query: 350 ILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINE 409
+LSN YA+ RW D +R M++ G+ K P S +EV + F+ GDK+HP I
Sbjct: 426 LLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYL 485
Query: 410 ALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIK 469
L+E+ R+ + G+ P T EVL D+EEE+K++ L YHSERLAI F +I + IRIIK
Sbjct: 486 KLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIK 545
Query: 470 NLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
NLRVCGDCHT+ K ISKI +REIIVRD +RFHHF++G CSC DYW
Sbjct: 546 NLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 303/538 (56%), Gaps = 24/538 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSS------------VL 48
MPV D+V+ +I GL R G +EA I +M N+ + ++ +
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 49 PIFADYVDVIKGKEIHGYAIRHGLD-----------ANVCIGSSLINMYAKCARVEDSHR 97
+ + +V + GY + ++ V +++I + + + + R
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 98 LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT 157
+F L+ +D +W +I + G E L F QM ++P S SI+ CA L +
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346
Query: 158 LHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMG 217
L G+Q+H ++R FDD++++AS L+ MY KCG + A+ +FD+ DI+ W ++I G
Sbjct: 347 LQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISG 406
Query: 218 NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
A HG +A+ +F +M G PN V +A+LTACS+AG +++ F SM + + P
Sbjct: 407 YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP 466
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKI 337
+ EHY+ D+LGRAG++ +A E I +M P VW LL AC+ H ++LA A+K+
Sbjct: 467 TVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKL 526
Query: 338 FMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAG 397
F +P+N G YV+LS+ A+ +W D A +R MR + K P CSWIEV K + F G
Sbjct: 527 FENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Query: 398 D-KSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGI 456
K+HP I L++ + + GY PD VLHDV+EE+K + L HSERLA+ +G+
Sbjct: 587 GIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGL 646
Query: 457 ICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ P+G IR++KNLRVCGDCH AIK ISK+ +REII+RD +RFHHF +G+CSC DYW
Sbjct: 647 LKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 144/338 (42%), Gaps = 46/338 (13%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN+++ G NGL +EA + +M N+ + + ++ + +++ + +
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNVFELM 105
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
+ NV ++++ Y + V ++ LF +P ++ +SW + G + +G D+
Sbjct: 106 P----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKAR 161
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD----NMFIASSL 183
K + M +K S + I C G+ +I FD+ N+ +++
Sbjct: 162 KLYDMM---PVKDVVASTNMIGGLCRE------GRVDEARLI---FDEMRERNVVTWTTM 209
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ Y + + +AR +F+ M VSWT++++G L G DA FE M +KP
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP---MKP-V 265
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKD-----YGIAPSFEHYAAVADLLGRAGKLQEA 298
+A A++ G I KA F+ M G+ ++E R G EA
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE----------RKGFELEA 315
Query: 299 YEFISNMHAG---PTENVWLTLLSACRVHKNVELAGKV 333
+ + M P+ +++LS C +++ +V
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 121/307 (39%), Gaps = 67/307 (21%)
Query: 83 INMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH 142
I+ ++ ++ ++ + F L K SWNSI++G NGL E + F +M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 143 VSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDK 202
+ N+ + L+ Y K I AR +F+
Sbjct: 75 ------------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M ++VSWTA++ G G +A SLF +M + N V++ + G IDKA
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLG---RAGKLQEAYEFISNMHAGPTENV--WLTL 317
++ M + A +++G R G++ EA M NV W T+
Sbjct: 161 RKLYDMM--------PVKDVVASTNMIGGLCREGRVDEARLIFDEMRE---RNVVTWTTM 209
Query: 318 LSACRVHKNVELAGKVAEKIFMIDPNNMG-AYVILSNTYAAARRWKDAASLRVFMRNKGM 376
++ R + V+ VA K+F + P ++ + Y + R +DA F M
Sbjct: 210 ITGYRQNNRVD----VARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE---FFEVMPM 262
Query: 377 KKTPACS 383
K AC+
Sbjct: 263 KPVIACN 269
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/490 (41%), Positives = 297/490 (60%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
AL + R+M ++ + +S+L + D+ G++IH I GL +G++LI+
Sbjct: 2 ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
MY+KC ++ + +F K AISW ++I GCVQNG +E L+ F M A + P +
Sbjct: 62 MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
SSI+ + + L + +G+QLH + +G ++F S+LLDMYAKCG + A F++M
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
+ ++W AVI A +G A +AI +F+ M G P+ V F++VL ACSH GL ++
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMK 241
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
YF+ M ++P EHY+ V D LGRAG + + + M +W ++L +CR++
Sbjct: 242 YFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIY 301
Query: 325 KNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSW 384
N +LA AE +F + P + AYVILSN YA A W+ AA ++ MR++G++K SW
Sbjct: 302 GNQDLATVAAENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNSW 361
Query: 385 IEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLY 444
+E+K K Y F + D ++P I E L+ L E M+++GY PDT LH V+ +QK L
Sbjct: 362 VEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESLK 421
Query: 445 YHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFE 504
YHSERLAI F +I TP GT I ++KNL C DCH AIK ISKIV R+IIVRD+ RFHHF+
Sbjct: 422 YHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHHFK 481
Query: 505 DGKCSCGDYW 514
DG CSCGDYW
Sbjct: 482 DGFCSCGDYW 491
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 44/321 (13%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+SW +I G +NG +EEAL + M L PD T SS++ + + G+++H Y
Sbjct: 85 ISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRATCSSIIKSSSSLGVIGIGRQLHAY 144
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
G ++V GS+L++MYAKC ++++ R F +P K++I+WN++I+ Q G
Sbjct: 145 LTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNA 204
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAH----------------LTTLHLGKQLHGCIIR 170
++ F ML P V+F S++ AC+H ++ K+ + C+I
Sbjct: 205 IRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNSMSPWKEHYSCVI- 263
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAIS 229
D + G + + D+M D V W++++ ++GN A
Sbjct: 264 --------------DALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIYGNQDLATV 309
Query: 230 LFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI-APSFEHYAAVADL 288
E + V ++ A+V + + AG + A + + +D G+ S + +
Sbjct: 310 AAENLFT-MVPTDATAYVILSNIYAKAGNWEGA-ARVKKIMRDRGVRKESGNSWVEIK-- 365
Query: 289 LGRAGKLQEAYEFISNMHAGP 309
Q+ Y F SN H P
Sbjct: 366 -------QKIYMFSSNDHTNP 379
>gi|297795827|ref|XP_002865798.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311633|gb|EFH42057.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 701
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 313/518 (60%), Gaps = 4/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +L S+N++I G G YEEA + + M ++ T + +L A V G
Sbjct: 184 MPERNLFSYNSIISGFVNFGNYEEAFELFKLMWEELSDCETHTFAVMLRASAGLWSVYVG 243
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H A++ G+ N + LI+MY+KC +ED+ F +P K ++WN+I+AG +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYALH 303
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G +E L +M + + + S ++ L L L KQ H +IR+GF+ +
Sbjct: 304 GYSEEALCLLYEMRDSGVSMDQFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIVAN 363
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+D Y+K G + AR +FDK+ +I+SW A++ G A HG DA+ LFE+M V
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAKVA 423
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+AVL+AC+++GL ++ W F SM++ +GI P HYA + +LLGR G L EA
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIA 483
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI T N+W LL+ACR+ N+EL VAEK++ + P +G YV+L N Y + +
Sbjct: 484 FIRRAPLKTTVNMWAALLNACRMQGNLELGRVVAEKLYGMGPEKLGNYVVLYNMYNSMGK 543
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRIN----EALKELLE 416
+AA + + +KG+ PAC+W+EV ++ ++F++GD+ + + + + EL+E
Sbjct: 544 TAEAAGVLETLESKGLSMIPACTWVEVGDQTHSFLSGDRFDSYNETVKREVYQKVDELME 603
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
+ + GY+ + K +L DV+E++++ + YHSE+LAI +G++ TP+ ++I +N R+C D
Sbjct: 604 EIYEYGYLAEEKNLLPDVDEKEEERVGRYHSEKLAIAYGLMNTPEWNPLQITQNHRICKD 663
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH ++FIS + RE++VRD SRFHHF++GKCSCG YW
Sbjct: 664 CHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 147/296 (49%), Gaps = 8/296 (2%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K ++G+ I +G + + + ++ M+ KC + D+ RLF +P ++ S+NSII+G V
Sbjct: 143 KRVYGFIISNGFEPEKYMMNRILLMHVKCGMIIDARRLFDEMPERNLFSYNSIISGFVNF 202
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E + F+ M +F+ ++ A A L ++++GKQLH C ++ G DN F++
Sbjct: 203 GNYEEAFELFKLMWEELSDCETHTFAVMLRASAGLWSVYVGKQLHVCALKLGVVDNTFVS 262
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
L+DMY+KCG+I ARC F+ M V+W ++ G ALHG + +A+ L +M GV
Sbjct: 263 CGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYALHGYSEEALCLLYEMRDSGVS 322
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ ++ + ++ S+ + G A+ D + G++ A
Sbjct: 323 MDQFTLSIMIRISTRLAKLELTKQAHASLIRS-GFESEIVANTALVDFYSKWGRVDTARY 381
Query: 301 FISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
+ P +N+ W L+ H A ++ E++ + PN++ +LS
Sbjct: 382 VFDKL---PRKNIISWNALMGGYANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLS 434
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 123 FDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
F E + F + I K ++ +++ AC L ++ K+++G II NGF+ ++ +
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFIISNGFEPEKYMMN 162
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L M+ KCG I AR +FD+M ++ S+ ++I G GN +A LF+ M ++
Sbjct: 163 RILLMHVKCGMIIDARRLFDEMPERNLFSYNSIISGFVNFGNYEEAFELFKLMWEELSDC 222
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYF 266
+ F +L A AGL WS +
Sbjct: 223 ETHTFAVMLRA--SAGL----WSVY 241
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/512 (39%), Positives = 297/512 (58%), Gaps = 24/512 (4%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI--FADYVDVIKGKE 62
+VSW +I G R+ +E +M L P+ TL S++ F +D+ GK
Sbjct: 256 SVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDL--GKW 313
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
H Y +R+G ++ + ++LI+MY KC +V + LF + KD W+ +I+
Sbjct: 314 FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSC 373
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D+ F +ML +KP +V+ S++ CA L LGK H I R+G + ++ + ++
Sbjct: 374 MDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 433
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L++MYAKCG++ +AR +F++ DI W ++ G ++HG +A+ LF +ME GV+PN
Sbjct: 434 LINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPN 493
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
+ FV++ ACSH+GL+ EHY + DLLGRAG L EA+ I
Sbjct: 494 DITFVSIFHACSHSGLM--------------------EHYGCLVDLLGRAGHLDEAHNII 533
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
NM P +W LL+AC++HKN+ L A KI +DP N G V+ SN YA+A+RW
Sbjct: 534 ENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 593
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
D S+R M + GMKK P SWIEV + F +GDK+ ++ E + E+ ++ + G
Sbjct: 594 DVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESG 653
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
Y P+T VL +++EE+K++ L YHSE+LA FG+I T GT IRI+KNLR+C DCH A K
Sbjct: 654 YTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATK 713
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SKI R IIVRD +RFHHF +G CSC YW
Sbjct: 714 LLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 161/316 (50%), Gaps = 5/316 (1%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
++N +I N L + + N M N D+F L S+L A G+E+HG+
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
A ++G ++V + ++L+NMY KC + + +F +P +D +SW +++ V++ F E
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA--SSLL 184
L+ R+M +K V+ S++ +L + G+ +HG I+RN D+ M ++ ++L+
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMY K G + A+ +FD++ +VSWT +I G + F +M ++ + PN +
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++++T C G +D +F++ G S A+ D+ G+ G++ A +
Sbjct: 294 TLLSLITECGFVGTLDLG-KWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNG 352
Query: 305 MHAGPTENVWLTLLSA 320
+ + +W L+SA
Sbjct: 353 VKKKDVK-IWSVLISA 367
>gi|326507562|dbj|BAK03174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/511 (38%), Positives = 301/511 (58%), Gaps = 5/511 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV----IKGKEI 63
+W+++I A+NGL A + R+M + ++ A D + +
Sbjct: 89 AWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPPAAKAVAAAADSSRPPLAPHAL 148
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG A + +V +GS++++MYAKC + D+ R+F +P ++ +SW+++I G G+
Sbjct: 149 HGLASKTPFAGDVFVGSAVLDMYAKCGNLSDARRVFDEMPERNVVSWSALIGGYADAGMH 208
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
L FR L ++ + S I+ CA T LG Q+H I+ D + F+ SSL
Sbjct: 209 PSALCIFRSALEEAVQVNDFTVSCIVRVCAAATLFELGAQVHARSIKTALDASPFVGSSL 268
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ +Y+KCG + A +F ++ W AV++ +A HG+ A F +M+ G +PN
Sbjct: 269 VSLYSKCGLVDCAYRVFSAAPERNLGIWNAVLIASAQHGHTSTAFERFTKMQHAGFRPNF 328
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
+ F+ +LTACSHAGL+D+ YF S+ K+Y I P EHYAA+ DLLGR G++ EA + I
Sbjct: 329 ITFLCLLTACSHAGLVDEGKRYF-SLMKEYRIEPEVEHYAAMVDLLGRVGRITEALDLIE 387
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
+M P ++VW LL ACR+ K+ + A A+++F + GA+++LS+TYAAA R D
Sbjct: 388 SMPMEPPDSVWGALLMACRMFKDADTAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHVD 447
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
AA R MR+ G++K SW+E + + FV+ + HP + I L+++ E+M GY
Sbjct: 448 AALARKAMRDAGIRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMAVAGY 507
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V DT V+ DV+ ++K L YHSERLAI G++ P+G IR++KNLRVC DCH A+K+
Sbjct: 508 VADTSAVVKDVDRDEKCASLGYHSERLAIALGLLIVPEGVPIRVMKNLRVCDDCHNAVKY 567
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SK R +++RDN RFH FEDG CSCGD+W
Sbjct: 568 LSKCTGRVVVLRDNRRFHRFEDGLCSCGDFW 598
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 159/336 (47%), Gaps = 13/336 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW+ +I G A G++ AL I R ++ + FT+S ++ + A G
Sbjct: 187 MPERNVVSWSALIGGYADAGMHPSALCIFRSALEEAVQVNDFTVSCIVRVCAAATLFELG 246
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +I+ LDA+ +GSSL+++Y+KC V+ ++R+F P ++ WN+++ Q+
Sbjct: 247 AQVHARSIKTALDASPFVGSSLVSLYSKCGLVDCAYRVFSAAPERNLGIWNAVLIASAQH 306
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + F +M A +P ++F ++ AC+H + GK+ + + +
Sbjct: 307 GHTSTAFERFTKMQHAGFRPNFITFLCLLTACSHAGLVDEGKRYFSLMKEYRIEPEVEHY 366
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++++D+ + G I A + + M + S W A++M + +A A +++ + G
Sbjct: 367 AAMVDLLGRVGRITEALDLIESMPMEPPDSVWGALLMACRMFKDADTAAIAAKRLFETGS 426
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + + T + +D A + +D GI L AG E +
Sbjct: 427 RSSGAHMLLSSTYAAAGRHVDAALA--RKAMRDAGI-----RKETGLSWLEAAG---EVH 476
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAE 335
F+SN P N +L +V + + +AG VA+
Sbjct: 477 TFVSNCRRHPRSNEIYNVLE--KVGEKMAVAGYVAD 510
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 305/517 (58%), Gaps = 6/517 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P DL +++ + G G ++E ++R+M +L D+ T S L + ++ D+
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLA 256
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH +R G ++ V ++INMY KC +V + R+F ++ + +I+ Q+
Sbjct: 257 RQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQD 316
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F+E L F +M ++ P +F+ + + A L+ L G LHG ++++G+ +++ +
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVG 376
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MYAK G+I AR F M DIV+W +I G + HG + + F++M G
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEI 436
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+ VL ACSH G +++ YFN + K + + P +HY + LL +AG ++A +
Sbjct: 437 PNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAED 496
Query: 301 FISNMHAGPTE---NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
F M P E W LL+AC V +N L KVAE PN+ G YV+LSN +A
Sbjct: 497 F---MRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAK 553
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
+R W+ A +R M +G+KK P SWI ++N+ + F+A + HP I +KE+L +
Sbjct: 554 SREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSK 613
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ GY PD V HDV+EEQ+++ L YHSE+LA+ +G++ TP+ + + + KN+R+C DC
Sbjct: 614 IRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDC 673
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H+AIK ISKI +R I++RD++RFHHF DG+CSC DYW
Sbjct: 674 HSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 155/306 (50%), Gaps = 2/306 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSW ++ G +G E L + + M + +P+ F + V + + +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEE 154
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK+ HG ++ GL ++ + ++L+ MY+ C+ ++ R+ LP D ++S ++G ++
Sbjct: 155 GKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G F EG + R+M + ++++ S + C++L L+L +Q+H ++R GF+ +
Sbjct: 215 CGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEA 274
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ ++++MY KCG + A+ +FD +IV T ++ + +A++LF +M+ V
Sbjct: 275 SGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN F L + + L+ K + + G A+ ++ ++G +++A
Sbjct: 335 PPNEYTFAISLNSIAELSLL-KHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 300 EFISNM 305
+ S M
Sbjct: 394 KAFSGM 399
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 156/320 (48%), Gaps = 11/320 (3%)
Query: 44 LSSVLPIFADYVDVIKGKEIHGYAI---RHGLDANVCIGSSLINMYAKCARVEDSHRLFC 100
L+ +L + A+ + G+ IHG+ I + +V +SLIN+Y KC + ++F
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 101 LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLH 159
L+P ++ +SW +++ G +G E LK F+ M+ + + +P + + +C+ +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153
Query: 160 LGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
GKQ HGC +++G + F+ ++L+ MY+ C A + D + D+ +++ + G
Sbjct: 154 EGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSF 279
G + + +M K+ + +++ +++ L CS+ ++ A + M + G
Sbjct: 214 ECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVR-LGFNSEV 272
Query: 280 EHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL--TLLSACRVHKNVELAGKVAEKI 337
E A+ ++ G+ GK+ A N HA +N+ L T++ A K+ E A + K+
Sbjct: 273 EASGAIINMYGKCGKVLYAQRVFDNTHA---QNIVLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 338 FMID-PNNMGAYVILSNTYA 356
+ P N + I N+ A
Sbjct: 330 DTKEVPPNEYTFAISLNSIA 349
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 297/508 (58%), Gaps = 40/508 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
M D+VSWN +I G A GL+ A+++ R++ + KPD+ T++S+LP
Sbjct: 183 MQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSM-------- 234
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL---FCLLPVKDAISWNSIIAG 116
GK ARVED L F + K ISWN+++A
Sbjct: 235 GK----------------------------ARVEDIALLKGVFDEMRFKGLISWNAMLAV 266
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
N + E ++ F +M I+P V+ ++++P+C ++ L LGK++H I R +
Sbjct: 267 YTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSS 326
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
M + ++L+DMYA CG ++ AR +FD M D+VSWT++I HG+ +AI LFE+M
Sbjct: 327 MLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCG 386
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G++P+S+AFVA+L ACSHAGL+D YF SMT ++ IAP EHYA + DLLGRAG ++
Sbjct: 387 QGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIR 446
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EAY+FI M P E VW LL ACR+H N+++ A+ + + P G YV+LSN YA
Sbjct: 447 EAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYA 506
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A RW D + +R M +KG+KK P S E+ ++ + F GD SHP I + L ELL
Sbjct: 507 RAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLR 566
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R+ + GY P+ + LHDVEEE K+ L HSE+LAI F +I T GT IRI NLR C D
Sbjct: 567 RIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSD 626
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFE 504
CH A K IS I REII++D +R H+ +
Sbjct: 627 CHHAAKLISTIAGREIILKDVNRIHYMK 654
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 172/361 (47%), Gaps = 50/361 (13%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNI---VRQMGNVNLKPDSFTLSSVLPIFADYVDVI 58
P V +N ++ GL L+ +AL + +R G+ PD +T L A ++
Sbjct: 81 PDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACF-PDHYTYPLALKSCAATDGLV 139
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
G++IH R GLD NV + S I+MYA+C R +D++++F + +D +SWN++I+G
Sbjct: 140 LGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFA 199
Query: 119 QNGLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
GLF + FR+++ + KP + +SI+P+ +GK
Sbjct: 200 HAGLFGRAMDVFRELVALQCPKPDAGTMASILPS--------MGK--------------- 236
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT---AVIMGNALHGNAHDAISLFEQM 234
A+ +I L + +FD+M ++SW AV N +H +A+ LF +M
Sbjct: 237 ----------ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHV---EAVELFMRM 283
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+KDG++P++V VL +C + + + K + S A+ D+ G
Sbjct: 284 QKDGIEPDAVTLATVLPSCGEVSALSLG-KRIHEVIKRRRMCSSMLLENALMDMYANCGC 342
Query: 295 LQEAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVIL 351
L+EA + +M G + V W +++SA H + A + EK+ ++P+++ IL
Sbjct: 343 LKEARDVFDSM--GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAIL 400
Query: 352 S 352
+
Sbjct: 401 A 401
>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
Length = 789
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/519 (40%), Positives = 311/519 (59%), Gaps = 8/519 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+ SWNT+I A+NG AL++ G + ++PD T +VL D+ +G
Sbjct: 274 MDRRDVCSWNTMISAFAQNGHSSGALDL---YGRMTIRPDGVTFVNVLEACDCPDDLERG 330
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH HG D+++ + ++L++MY +C R++ + +F + I+ N+IIA Q
Sbjct: 331 ESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQF 390
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFD---DN 176
G D L FRQML I+P + +++ ACA + LH + D +
Sbjct: 391 GRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHD 450
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + ++L++MYAKCG++ AR IFD ++ +W A++ G A HG A+ A+ L +M+
Sbjct: 451 ILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQL 510
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G+ P+ ++F A L+A SHA ++ F ++++DYG+ PS EHY AV DLLGRAG L+
Sbjct: 511 AGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLE 570
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EA F+ +M W+ LL ACR+HK+ + A + AE I IDP++ +Y +LSN Y+
Sbjct: 571 EAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYS 630
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
AA RW +A +R M G +K P SWIEVKN+ + F D+SHP I E L EL
Sbjct: 631 AAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRV 690
Query: 417 RME-QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
++ +E YVPD VLHDVE+E ++NLL++HSE+LA+ FG+I T +G+ I IIKNLR+C
Sbjct: 691 VLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICE 750
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH +K SK +REI+VRD RFHHF G CSC D W
Sbjct: 751 DCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 156/313 (49%), Gaps = 14/313 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + +SWN VI A+ G + +L ++M PD+ L + + +G
Sbjct: 73 MPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVF---LSLIKAPRTIQEG 129
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ + +A + G D + +G++LI MY +C R++ + F + + +SWN++I +
Sbjct: 130 EIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRG 189
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSF----SSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
++ L+ FR+ML+ I P V+ S++ A +TT G +H C I +G
Sbjct: 190 DEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTC--GNLIHSCSIDSGLISV 247
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+A+S+++++ + GNI A IF+KMD D+ SW +I A +G++ A+ L+ +M
Sbjct: 248 TTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT- 306
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
++P+ V FV VL AC +++ S + + +G A+ + R G+L
Sbjct: 307 --IRPDGVTFVNVLEACDCPDDLERGESIHRDV-RAHGYDSDLIVATALVSMYRRCGRLD 363
Query: 297 EAYE-FISNMHAG 308
A E F + H G
Sbjct: 364 RAAEVFAAIQHPG 376
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 5/263 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G++IH I G ++ + + L++MYA+ D+ L +P ++A+SWN++I
Sbjct: 30 QGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANA 89
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
Q G F L FF++ML P V F S++ A T+ G+ + ++GFD +
Sbjct: 90 QAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAP---RTIQEGEIVQEFAEKSGFDRSFV 146
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MY +CG + A+ FD++ +VSW A+I + ++ +F +M G
Sbjct: 147 VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQG 206
Query: 239 VKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
+ PN+V + + +A + A I + +S + D G+ ++ +L GR G +
Sbjct: 207 IAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITR 266
Query: 298 AYEFISNMHAGPTENVWLTLLSA 320
A + M + W T++SA
Sbjct: 267 ANDIFEKMDRRDVCS-WNTMISA 288
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVI 215
T+L G+++H +I +G+ D++F+++ LL MYA+ + R A + D+M + +SW AVI
Sbjct: 26 TSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVI 85
Query: 216 MGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGI 275
NA G+ ++ F++M +DG P++V F++++ A + + G
Sbjct: 86 RANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTI----QEGEIVQEFAEKSGF 141
Query: 276 APSFEHYAAVADLLGRAGKLQEAYE 300
SF A+ + GR G+L A +
Sbjct: 142 DRSFVVGTALIGMYGRCGRLDRAKD 166
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 282/435 (64%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIK 139
+++I+ YA V + +F +DA SW+S+I+ + E L+ +R+M +A +
Sbjct: 151 NTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVA 210
Query: 140 PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCI 199
P +S S++ AC+ + L +G ++H + N + +M + ++L+DMYAKCG+I + +
Sbjct: 211 PDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKV 270
Query: 200 FDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLI 259
F M + D+++W+++I+G A HG HDA+SLF +M G++PN + F+ VL AC+H GL+
Sbjct: 271 FHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLV 330
Query: 260 DKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLS 319
+ YF+SM+ +G+ P EHY + DLLGRAG ++EA E I +M P +W TLL
Sbjct: 331 NDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLG 390
Query: 320 ACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKT 379
ACR+HKNVE+A + K+ ++DP G YV+LSN YA A W+ A +R +R + +++
Sbjct: 391 ACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRV 450
Query: 380 PACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQK 439
P S IE +N + FV+GD+SHP I + L+E+++R+ Q GY P T VL D++E+ K
Sbjct: 451 PGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSK 510
Query: 440 KNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSR 499
K L HSE+LAI FG++ TP +T+RI KNLR C DCH+AIK IS R++IVRD +R
Sbjct: 511 KRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDRNR 570
Query: 500 FHHFEDGKCSCGDYW 514
FHHF +G+CSC DYW
Sbjct: 571 FHHFSEGQCSCKDYW 585
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 120/227 (52%), Gaps = 14/227 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D SW+++I A+ +EAL + R+M + PD ++ SVL + + G E+H
Sbjct: 177 DAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVH 236
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ + ++ ++ +G++L++MYAKC +E+S ++F +PVKD ++W+S+I G +GL
Sbjct: 237 RFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGH 296
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQ-------LHGCIIRNGFDDNM 177
+ L F +M+ ++P ++F ++ AC H+ ++ GK+ +HG + R M
Sbjct: 297 DALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPR------M 350
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G++ A + M D + W ++ +H N
Sbjct: 351 EHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKN 397
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 92/226 (40%), Gaps = 71/226 (31%)
Query: 160 LGKQLHGCIIRNGFDD-NMFIASSLLDMYAK--CGNIRLARC------------------ 198
LG LH +R+GF ++F+ ++L++MYAK G I LAR
Sbjct: 65 LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124
Query: 199 -------------IFDKMDLHDIVSWTAVIMGNALHGN---------------------- 223
+FD M D+VSW +I G A+ G+
Sbjct: 125 AYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSM 184
Query: 224 ---------AHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
+ +A+ L+ +M GV P+ ++ V+VL+ACS G + + + +
Sbjct: 185 ISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIG-AEVHRFVESNR 243
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLL 318
+ + A+ D+ + G ++ + + HA P ++V W +++
Sbjct: 244 VEVDMKLGTALVDMYAKCGDIENSLKVF---HAMPVKDVLTWSSMI 286
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+++W+++I+GLA +GL +AL++ +M + L+P+ T VL I +V ++
Sbjct: 274 MPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVL-IACTHVGLVND 332
Query: 61 --KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
K + HG+ + ++++ + VE++ L + K D I W +++ C
Sbjct: 333 GKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGAC 392
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 293/515 (56%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK- 59
MP D+VS N + G A A+ + M +KP+ T+ ++ D+
Sbjct: 409 MPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSY 468
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +H Y + GL ++ I +SLI MYA C +E S +F + K ISWN+IIA V+
Sbjct: 469 GMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVR 528
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+G +E +K F A K + + + A+L +L G QLHG ++NG D + +
Sbjct: 529 HGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHV 588
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++ +DMY KCG + W +I G A +G +A F+ M G
Sbjct: 589 VNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQ 648
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V FVA+L+ACSHAGLIDK Y+NSM +G++P +H + DLLGR GK EA
Sbjct: 649 KPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAE 708
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+FI M P + +W +LLS+ R HKN+++ K A+ + +DP + AYV+LSN YA
Sbjct: 709 KFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNA 768
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW D LR M+ + K PACSW+++KN+ F GD+SH +I L E+L ++
Sbjct: 769 RWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLR 828
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GYV DT LHD +EEQK++ L+ HSE+LA+ +G++ P+G+TIRI KNLRVC DCH
Sbjct: 829 EVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHL 888
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K +S + REI++RD RFH F+ G CSC D+W
Sbjct: 889 VFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 1/258 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D +SWN +I + +Y + ++ M + +KPD TL S++ + A V G
Sbjct: 206 MEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALG 265
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH + GL +V + ++L+NMY+ +++++ LF + +D ISWN++I+ VQ+
Sbjct: 266 SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQS 325
Query: 121 GLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
E L+ Q+L + P ++FSS + AC+ L G+ +H I++ + + I
Sbjct: 326 NSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLI 385
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY+KC ++ +F+ M +D+VS + G A + +A+ +F M G+
Sbjct: 386 GNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGI 445
Query: 240 KPNSVAFVAVLTACSHAG 257
KPN + + + C G
Sbjct: 446 KPNYITMINLQGTCKSLG 463
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW ++V L+ NG EEAL R+M + ++ L++V+ + D + G
Sbjct: 105 MPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAG 164
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ + + GL +V + +SLI M+ RV+D+ RLF + +D ISWN++I+
Sbjct: 165 LQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHE 224
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + M ++KP + S++ CA + LG +H + +G ++ +
Sbjct: 225 EVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI 284
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ-MEKDGV 239
++L++MY+ G + A +F M D++SW +I + +A+ Q ++ D
Sbjct: 285 NALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG 344
Query: 240 KPNSVAFVAVLTACS 254
PNS+ F + L ACS
Sbjct: 345 PPNSMTFSSALGACS 359
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 4/308 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFAD---YVDV 57
MP SW T + G AR GL A ++R M ++ F L+S++
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G IH R GL NV IG++L+++Y V ++ RLF +P ++ +SW +I+
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
NG +E L +R+M + + ++++ C L G Q+ ++ +G ++
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+A+SL+ M+ ++ A +FD+M+ D +SW A+I + + M
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
VKP+ ++++ C+ + L+ S +S+ G+ S A+ ++ AGKL E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALG-SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 298 AYEFISNM 305
A NM
Sbjct: 300 AESLFRNM 307
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 307/524 (58%), Gaps = 38/524 (7%)
Query: 25 ALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLIN 84
AL ++ M L P + TLS+ LP + G+ +HGYA + L + + ++L+
Sbjct: 373 ALALLSDMLAQGLLPTAHTLSASLPACRG---LSPGRALHGYAFKLALAGDSYVATALLG 429
Query: 85 MYAKC-----AR---------------------------VEDSHRLFCLLPVKDAISWNS 112
MYA+ AR ++D+ LF LP KD + WN+
Sbjct: 430 MYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNA 489
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
+I G Q+G +E L+ FR+ML + ++P V+ ++ A A L T+ GK LH ++N
Sbjct: 490 MIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHS-YVKNS 548
Query: 173 --FDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
++ + ++L+DMY KCG++ A +F + DIV W A+I G A+HG++ A+ +
Sbjct: 549 RRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEM 608
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F Q + G+ P + F+ +L ACSH+G++++ +F SM ++YGI P EHY + DLLG
Sbjct: 609 FVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLG 668
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
RAG ++EA+ + +M P +W++LL+ACR+HKN+ L ++A+ + N G Y++
Sbjct: 669 RAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYIL 728
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEA 410
LSN YAA W + A +R M+ G++K P CS IE+ + Y FVAGD SHP I
Sbjct: 729 LSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVM 788
Query: 411 LKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKN 470
L ++ +++ G+VP T+ VLHD++E K+ L HSE+LA+ FG+I T G TI+I+KN
Sbjct: 789 LDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKN 848
Query: 471 LRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
LR C DCH +K IS+I R+I+ RD +RFHHF DG CSCGDYW
Sbjct: 849 LRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V WN +I G ++G EAL + R+M ++PD T+ VL A V G
Sbjct: 479 LPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESG 538
Query: 61 KEIHGYAIR-HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H Y + +V +G++LI+MY KC + D+ +F + KD + WN++I G
Sbjct: 539 KWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAM 598
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G + L+ F Q + P ++F ++ AC+H + G++ + R G D +
Sbjct: 599 HGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIE 658
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQM 234
++D+ + G I+ A C+ M + D V W +++ LH N +SL +Q+
Sbjct: 659 HYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKN----MSLGQQI 711
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 59 KGKEIHGYAIRHGL-DA-NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ E+H +R GL DA + + L YA R++ S L AI + S I
Sbjct: 304 RAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHA 363
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
G L ML + P + S+ +PAC L+ G+ LHG + +
Sbjct: 364 HSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSP---GRALHGYAFKLALAGD 420
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKM--DLH---------------------------- 206
++A++LL MYA+ G+ AR +FD M D H
Sbjct: 421 SYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLP 480
Query: 207 --DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS 264
D V W A+I G HG ++A+ LF +M GV+P+ V V VL+A + G ++
Sbjct: 481 TKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKW 540
Query: 265 YFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + + S A+ D+ + G L +A +
Sbjct: 541 LHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVD 576
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 297/508 (58%), Gaps = 40/508 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIK 59
M D+VSWN +I G A GL+ A+++ R++ + KPD+ T++S+LP
Sbjct: 73 MQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSM-------- 124
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL---FCLLPVKDAISWNSIIAG 116
GK ARVED L F + K ISWN+++A
Sbjct: 125 GK----------------------------ARVEDIALLKGVFDEMRFKGLISWNAMLAV 156
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
N + E ++ F +M I+P V+ ++++P+C ++ L LGK++H I R +
Sbjct: 157 YTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSS 216
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
M + ++L+DMYA CG ++ AR +FD M D+VSWT++I HG+ +AI LFE+M
Sbjct: 217 MLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCG 276
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
G++P+S+AFVA+L ACSHAGL+D YF SMT ++ IAP EHYA + DLLGRAG ++
Sbjct: 277 QGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIR 336
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
EAY+FI M P E VW LL ACR+H N+++ A+ + + P G YV+LSN YA
Sbjct: 337 EAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYA 396
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
A RW D + +R M +KG+KK P S E+ ++ + F GD SHP I + L ELL
Sbjct: 397 RAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLR 456
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R+ + GY P+ + LHDVEEE K+ L HSE+LAI F +I T GT IRI NLR C D
Sbjct: 457 RIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSD 516
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFE 504
CH A K IS I REII++D +R H+ +
Sbjct: 517 CHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 46/303 (15%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
++ G++IH R GLD NV + S I+MYA+C R +D++++F + +D +SWN++I+G
Sbjct: 28 LVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISG 87
Query: 117 CVQNGLFDEGLKFFRQMLIAKI-KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
GLF + FR+++ + KP + +SI+P+ +GK
Sbjct: 88 FAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS--------MGK------------- 126
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT---AVIMGNALHGNAHDAISLFE 232
A+ +I L + +FD+M ++SW AV N +H +A+ LF
Sbjct: 127 ------------ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHV---EAVELFM 171
Query: 233 QMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRA 292
+M+KDG++P++V VL +C + + + K + S A+ D+
Sbjct: 172 RMQKDGIEPDAVTLATVLPSCGEVSALSLG-KRIHEVIKRRRMCSSMLLENALMDMYANC 230
Query: 293 GKLQEAYEFISNMHAGPTENV-WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYV 349
G L+EA + +M G + V W +++SA H + A + EK+ ++P+++
Sbjct: 231 GCLKEARDVFDSM--GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVA 288
Query: 350 ILS 352
IL+
Sbjct: 289 ILA 291
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS 210
+CA L LG+Q+H R G D N+F+A S + MYA+CG A +F++M D+VS
Sbjct: 21 SCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVS 80
Query: 211 WTAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKA 262
W A+I G A G A+ +F ++ KP++ ++L + A + D A
Sbjct: 81 WNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIA 133
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 312/542 (57%), Gaps = 43/542 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+ VSW +I G + G + E+L + QM + D F L++++ ++ +D+ +++H
Sbjct: 359 NTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLH 418
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD------------------ 106
+++ G V I +SLI+MYAKC ++++ +F + +D
Sbjct: 419 SLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIG 478
Query: 107 -------------AISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPAC 152
I+WN+++ +Q+G ++GLK + ML K + P V++ ++ C
Sbjct: 479 KAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGC 538
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A + LG Q+ G ++ G + + ++++ MY+KCG I AR IFD + D+VSW
Sbjct: 539 ADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWN 598
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G + HG AI +F+ M K G KP+ +++VAVL++CSH+GL+ + YF+ + +D
Sbjct: 599 AMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRD 658
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
+ ++P EH++ + DLL RAG L EA I M PT VW LLSAC+ H N ELA
Sbjct: 659 HNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAEL 718
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
A+ +F +D + G Y++L+ YA A + D+A +R MR+KG+KK P SW+EVKNK +
Sbjct: 719 AAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVH 778
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAI 452
F A D SHP I E L EL+E++ Q GYV T+ + ++ +HSE+LA+
Sbjct: 779 VFKAEDVSHPQVIAIREKLDELMEKIAQLGYVR-TESLRSEI----------HHSEKLAV 827
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
FGI+ P I I+KNLR+CGDCHT IK IS + RE ++RD RFHHF+ G CSCGD
Sbjct: 828 AFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGD 887
Query: 513 YW 514
YW
Sbjct: 888 YW 889
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 36/338 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VSWN ++ L+++G EAL++ M N ++ DS T +S L A + G
Sbjct: 254 MPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWG 313
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H IR + + S+++ +YAKC +++ R+F L ++ +SW +I G +Q
Sbjct: 314 KQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQY 373
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F E L+ F QM + + ++I+ C++ + L +QLH +++G + I+
Sbjct: 374 GCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVIS 433
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM------ 234
+SL+ MYAKCGN++ A IF M+ DIVSWT ++ + GN A F+ M
Sbjct: 434 NSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVI 493
Query: 235 --------------EKDGVK------------PNSVAFVAVLTACSHAGLIDKAWSYFNS 268
E+DG+K P+ V +V + C+ G +K
Sbjct: 494 TWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMG-ANKLGDQITG 552
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEA---YEFIS 303
T G+ AV + + G++ EA ++F+S
Sbjct: 553 HTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 163/353 (46%), Gaps = 36/353 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D+ SWNT++ G ++G + +A+ + V + + P++FT +
Sbjct: 121 MPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEV 180
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHR---------------------- 97
++ G + G + + + +++M+ +C V+ + +
Sbjct: 181 ALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAK 240
Query: 98 ---------LFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
LF +P +D +SWN +++ Q+G E L M ++ +++S
Sbjct: 241 SYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSS 300
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+ ACA L++L GKQLH +IR+ + ++AS+++++YAKCG + AR +F + +
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNT 360
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWS-YFN 267
VSWT +I G +G +++ LF QM + + + A +++ CS+ +D + +
Sbjct: 361 VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR--MDMCLARQLH 418
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
S++ G + ++ + + G LQ A S+M + W +L+A
Sbjct: 419 SLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVS-WTGMLTA 470
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 118/226 (52%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M ++++WN ++ ++G E+ L + M ++ PD T ++ AD
Sbjct: 487 MSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKL 546
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +I G+ ++ GL + + +++I MY+KC R+ ++ ++F L KD +SWN++I G Q
Sbjct: 547 GDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQ 606
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G+ + ++ F ML KP ++S+ +++ +C+H + GK + R+ +
Sbjct: 607 HGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLE 666
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
S ++D+ A+ GN+ A+ + D+M + W A++ HGN
Sbjct: 667 HFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGN 712
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ NV + ++N YAK + D+ LF +P +D SWN++++G Q+G F + ++ F
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 133 MLIAKIK-PRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCG 191
M + P +F M +C L + QL G + + GF + +A+ ++DM+ +CG
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 192 NIRLAR------------C-------------------IFDKMDLHDIVSWTAVIMGNAL 220
+ A C +F+ M D+VSW ++ +
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
G A +A+S+ M GV+ +S + + LTAC+ + + + P +
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL---PCID 328
Query: 281 HYAAVA--DLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH----KNVELAGKVA 334
Y A A +L + G +EA S++ T + W L+ + +++EL ++
Sbjct: 329 PYVASAMVELYAKCGCFKEARRVFSSLRDRNTVS-WTVLIGGFLQYGCFSESLELFNQMR 387
Query: 335 EKIFMID 341
++ +D
Sbjct: 388 AELMTVD 394
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 307/508 (60%), Gaps = 2/508 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + WNT+ G RN L E++ + ++M ++ ++PD FT V+ + + G
Sbjct: 69 MPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCG 128
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+H + +++G + + + L+ MY K + + LF + VKD ++WN+ IA CVQ
Sbjct: 129 VSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQT 188
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G L++F +M ++ + S++ AC L +L +G++++ + + N+ +
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVE 248
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++ LDM+ KCG+ AR +FD M ++VSW+ +I+G A++G++ +A++LF M+ +G++
Sbjct: 249 NARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLR 308
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTK--DYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN V F+ VL+ACSHAGL+++ YF+ M + D + P EHYA + DLLGR+G L+EA
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
YEFI M P +W LL AC VH+++ L KVA+ + P+ +V+LSN YAAA
Sbjct: 369 YEFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W +R MR G KK A S +E K + F GD SHP I E L E+L+++
Sbjct: 429 GKWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKI 488
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
GYVPDT V HDVE E+K++ L +HSE+LAI FG+I G IR++KNLR C DCH
Sbjct: 489 RNMGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCH 548
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDG 506
KF+S++ REII+RD +RFHHF +G
Sbjct: 549 VFSKFVSRLTSREIIMRDKNRFHHFRNG 576
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH IR G + + L+ + + ++F +P WN++ G V+N
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRN 87
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
L E + +++M ++P ++ ++ A + L L G LH +++NGF+ +A
Sbjct: 88 QLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVA 147
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+ MY K G + A +F+ M + D+V+W A I GN+ A+ F +M D V+
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
+S V++L+AC G +D ++ K+
Sbjct: 208 FDSFTVVSMLSACGQLGSLDIGEEIYDRARKE 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,193,121,755
Number of Sequences: 23463169
Number of extensions: 334343106
Number of successful extensions: 1188948
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8747
Number of HSP's successfully gapped in prelim test: 2766
Number of HSP's that attempted gapping in prelim test: 1053890
Number of HSP's gapped (non-prelim): 55416
length of query: 514
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 367
effective length of database: 8,910,109,524
effective search space: 3270010195308
effective search space used: 3270010195308
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 79 (35.0 bits)