BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040365
(514 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/514 (67%), Positives = 426/514 (82%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+VS+NT+I G A++G+YE+AL +VR+MG +LKPDSFTLSSVLPIF++YVDVIKG
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGY IR G+D++V IGSSL++MYAK AR+EDS R+F L +D ISWNS++AG VQN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++E L+ FRQM+ AK+KP V+FSS++PACAHL TLHLGKQLHG ++R GF N+FIA
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DMY+KCGNI+ AR IFD+M++ D VSWTA+IMG+ALHG+ H+A+SLFE+M++ GVK
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN VAFVAVLTACSH GL+D+AW YFNSMTK YG+ EHYAAVADLLGRAGKL+EAY
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FIS M PT +VW TLLS+C VHKN+ELA KVAEKIF +D NMGAYV++ N YA+ R
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
WK+ A LR+ MR KG++K PACSWIE+KNK + FV+GD+SHP +INE LK ++E+ME+
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
EGYV DT VLHDV+EE K+ LL+ HSERLA+ FGII T GTTIR+ KN+R+C DCH A
Sbjct: 622 EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 681
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IKFISKI +REIIVRDNSRFHHF G CSCGDYW
Sbjct: 682 IKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 187/385 (48%), Gaps = 40/385 (10%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
+++W +VI L+ +AL +M PD SVL +D+ G+ +HG
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 66 YAIRHGLDANVCIGSSLINMYAKC-----------------ARVEDS------------- 95
+ +R G+D ++ G++L+NMYAK R +S
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 96 ------HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
R+F ++P KD +S+N+IIAG Q+G++++ L+ R+M +KP + SS++
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
P + + GK++HG +IR G D +++I SSL+DMYAK I + +F ++ D +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SW +++ G +G ++A+ LF QM VKP +VAF +V+ AC+H + +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
+ G + +A+ D+ + G ++ A + M+ E W ++ +H +
Sbjct: 370 LRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHE 427
Query: 330 AGKVAEKIFM--IDPNNMGAYVILS 352
A + E++ + PN + +L+
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLT 452
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+ K++H IR ++ S +I++Y + ++ LF L ++W S+I
Sbjct: 23 QAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
LF + L F +M + P H F S++ +C + L G+ +HG I+R G D +++
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 179 IASSLLDMYAK---------CGN---------------------------IRLARCIFDK 202
++L++MYAK GN I R +F+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 203 MDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA 262
M D+VS+ +I G A G DA+ + +M +KP+S +VL S + K
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 263 WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ + GI +++ D+ ++ +++++ S ++
Sbjct: 262 KEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/546 (42%), Positives = 345/546 (63%), Gaps = 35/546 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+++VSWN ++ G R+G ++EA+ + +++ ++ PD T+SSVLP D + G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA---------------- 107
HGY I+ GL + C+ S++I+MY K V LF + +A
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 108 -------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
+SW SIIAGC QNG E L+ FR+M +A +KP HV+ S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PAC ++ L G+ HG +R DN+ + S+L+DMYAKCG I L++ +F+ M ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
V W +++ G ++HG A + +S+FE + + +KP+ ++F ++L+AC GL D+ W YF
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 269 MTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVE 328
M+++YGI P EHY+ + +LLGRAGKLQEAY+ I M P VW LL++CR+ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVK 388
LA AEK+F ++P N G YV+LSN YAA W + S+R M + G+KK P CSWI+VK
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 389 NKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSE 448
N+ Y +AGDKSHP +I E + E+ + M + G+ P+ LHDVEE++++ +L+ HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 449 RLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKC 508
+LA+VFG++ TPDGT +++IKNLR+CGDCH IKFIS REI +RD +RFHHF+DG C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 509 SCGDYW 514
SCGD+W
Sbjct: 755 SCGDFW 760
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 184/410 (44%), Gaps = 76/410 (18%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + S++++I L + L+ +++ + +M + L PDS L ++ + A+ G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDA------------- 107
K+IH + GLD + + S+ +MY +C R+ D+ ++F + KD
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 108 ----------------------ISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
+SWN I++G ++G E + F+++ P V+
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++P+ L++G+ +HG +I+ G + + S+++DMY K G++ +F++ ++
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 206 HD-----------------------------------IVSWTAVIMGNALHGNAHDAISL 230
+ +VSWT++I G A +G +A+ L
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F +M+ GVKPN V ++L AC + + S + + + + +A+ D+
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYA 434
Query: 291 RAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF 338
+ G++ + + + NM PT+N+ W +L++ +H + + E +
Sbjct: 435 KCGRINLS-QIVFNMM--PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
K + H ++ G + I + LI Y+ D+ + +P S++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
+ LF + + F +M + P ++ CA L+ +GKQ+H +G D + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ S+ MY +CG + AR +FD+M D+V+ +A++ A G + + + +ME G
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
++ N V++ +L+ + +G +A F +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +LV WN+++ G + +G +E ++I + LKPD + +S+L +G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 61 -KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC- 117
K + +G+ + S ++N+ + ++++++ L +P + D+ W +++ C
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 118 VQNGL 122
+QN +
Sbjct: 569 LQNNV 573
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 333/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D V+W T+I G +++ +AL QM P+ FTLSSV+ A G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG+ ++ G D+NV +GS+L+++Y + ++D+ +F L ++ +SWN++IAG +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L+ F+ ML +P H S++S+ AC+ L GK +H +I++G F
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++LLDMYAK G+I AR IFD++ D+VSW +++ A HG +A+ FE+M + G++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN ++F++VLTACSH+GL+D+ W Y+ M KD GI P HY V DLLGRAG L A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M PT +W LL+ACR+HKN EL AE +F +DP++ G +VIL N YA+ R
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W DAA +R M+ G+KK PACSW+E++N + FVA D+ HP I +E+L ++++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVPDT V+ V++++++ L YHSE++A+ F ++ TP G+TI I KN+RVCGDCHTA
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK SK+V REIIVRD +RFHHF+DG CSC DYW
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+I+G+ +H + ++ ++ +G++L+NMYAKC +E++ ++F +P +D ++W ++I+G
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
Q+ + L FF QML P + SS++ A A G QLHG ++ GFD N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+LLD+Y + G + A+ +FD ++ + VSW A+I G+A A+ LF+ M +
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
DG +P+ ++ ++ ACS G +++ M K +F + D+ ++G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIH 314
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVH 324
+A + + A W +LL+A H
Sbjct: 315 DARKIFDRL-AKRDVVSWNSLLTAYAQH 341
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 124 DEGLKFFRQMLIAKIKPRHVS----------FSSIMPACAHLTTLHLGKQLHGCIIRNGF 173
DE LKF L+ + + +++++ C L G+ +H I+++ F
Sbjct: 32 DESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIF 91
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
++ + ++LL+MYAKCG++ AR +F+KM D V+WT +I G + H DA+ F Q
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 234 MEKDGVKPNSVAFVAVLTACS 254
M + G PN +V+ A +
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAA 172
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 329/514 (64%), Gaps = 1/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +VSW ++ A+NG EAL I QM +++KPD L SVL F D+ +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ IH ++ GL+ + SL MYAKC +V + LF + + I WN++I+G +N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E + F +M+ ++P +S +S + ACA + +L + ++ + R+ + D++FI+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S+L+DM+AKCG++ AR +FD+ D+V W+A+I+G LHG A +AISL+ ME+ GV
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN V F+ +L AC+H+G++ + W +FN M D+ I P +HYA V DLLGRAG L +AYE
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I M P VW LLSAC+ H++VEL A+++F IDP+N G YV LSN YAAAR
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W A +RV M+ KG+ K CSW+EV+ + AF GDKSHP Y I ++ + R+++
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+V + LHD+ +E+ + L HSER+AI +G+I TP GT +RI KNLR C +CH A
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISK+V REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 151/276 (54%), Gaps = 3/276 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P + WN +I G +RN +++AL + M + PDSFT +L + + G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF--CLLPVKDAISWNSIIAGCV 118
+ +H R G DA+V + + LI +YAKC R+ + +F LP + +SW +I++
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNG E L+ F QM +KP V+ S++ A L L G+ +H +++ G +
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SL MYAKCG + A+ +FDKM +++ W A+I G A +G A +AI +F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DY 273
V+P++++ + ++AC+ G +++A S + + + DY
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH + GL + + + LI+ + + + ++F LP WN+II G +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
F + L + M +A++ P +F ++ AC+ L+ L +G+ +H + R GFD ++F+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHD--IVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ L+ +YAKC + AR +F+ + L + IVSWTA++ A +G +A+ +F QM K
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ VA V+VL A + + + S S+ K G+ + ++ + + G++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 299 YEFISNMHAGPTENVWLTLLSA 320
M + P +W ++S
Sbjct: 277 KILFDKMKS-PNLILWNAMISG 297
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
++S++ + H L KQ+H ++ G + F+ + L+ + G+I AR +FD +
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 205 LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
I W A+I G + + + DA+ ++ M+ V P+S F +L ACS
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/541 (43%), Positives = 336/541 (62%), Gaps = 31/541 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D+VSWNT+I G A++G +EA RQ+ + + D FT ++++ + V +
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 61 KEIH----------------GYAIRHGLDA-----------NVCIGSSLINMYAKCARVE 93
+E+ GY ++ NV +++I YA+C ++
Sbjct: 301 RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKIS 360
Query: 94 DSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
++ LF +P +D +SW ++IAG Q+G E L+ F QM + SFSS + CA
Sbjct: 361 EAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
+ L LGKQLHG +++ G++ F+ ++LL MY KCG+I A +F +M DIVSW
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 480
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G + HG A+ FE M+++G+KP+ VAVL+ACSH GL+DK YF +MT+DY
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDY 540
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
G+ P+ +HYA + DLLGRAG L++A+ + NM P +W TLL A RVH N ELA
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETA 600
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
A+KIF ++P N G YV+LSN YA++ RW D LRV MR+KG+KK P SWIE++NK +
Sbjct: 601 ADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHT 660
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIV 453
F GD+ HP I L+EL RM++ GYV T VLHDVEEE+K+ ++ YHSERLA+
Sbjct: 661 FSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVA 720
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
+GI+ G IR+IKNLRVC DCH AIK++++I R II+RDN+RFHHF+DG CSCGDY
Sbjct: 721 YGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDY 780
Query: 514 W 514
W
Sbjct: 781 W 781
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 22/270 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP VS+N +I G RNG +E A + +M +L + + ++ + ++ K
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNLGKA 145
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E+ + I D VC +++++ YA+ V+D+ +F +P K+ +SWN++++ VQN
Sbjct: 146 REL--FEIMPERD--VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 201
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-IRNGFDDNMFI 179
+E F+ ++ VS++ ++ + +Q + +R+ N I
Sbjct: 202 SKMEEACMLFK----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
YA+ G I AR +FD+ + D+ +WTA++ G + +A LF++M
Sbjct: 258 TG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP---- 308
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+ N V++ A+L ++ A F+ M
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 125/267 (46%), Gaps = 22/267 (8%)
Query: 73 DANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
D+++ + I+ Y + R ++ R+F +P ++S+N +I+G ++NG F+ K F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M + VS++ ++ L ++L + + ++ +++L YA+ G
Sbjct: 121 MPERDL----VSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGC 172
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
+ AR +FD+M + VSW A++ + +A LF+ E + V++ +L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGG 228
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
I +A +F+SM ++ + + ++GK+ EA + P ++
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVS-----WNTIITGYAQSGKIDEARQLFDE---SPVQD 280
Query: 313 V--WLTLLSACRVHKNVELAGKVAEKI 337
V W ++S ++ VE A ++ +K+
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKM 307
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +VS+ ++I G AR GL EA+ + +M + PD +T+++VL A Y + +G
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H + + L ++ + ++L++MYAKC ++++ +F + VKD ISWN+II G +N
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E L F +L K P + + ++PACA L+ G+++HG I+RNG+ + +
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
A+SL+DMYAKCG + LA +FD + D+VSWT +I G +HG +AI+LF QM + G+
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ + ++FV++L ACSH+GL+D+ W +FN M + I P+ EHYA + D+L R G L +AY
Sbjct: 597 EADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAY 656
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
FI NM P +W LL CR+H +V+LA KVAEK+F ++P N G YV+++N YA A
Sbjct: 657 RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAE 716
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W+ LR + +G++K P CSWIE+K + FVAGD S+P I L+++ RM
Sbjct: 717 KWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMI 776
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY P TK L D EE +K+ L HSE+LA+ GII + G IR+ KNLRVCGDCH
Sbjct: 777 EEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHE 836
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
KF+SK+ +REI++RD++RFH F+DG CSC +W
Sbjct: 837 MAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 11/303 (3%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN ++ LA++G + ++ + ++M + ++ DS+T S V F+ V G+++HG+ +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G +G+SL+ Y K RV+ + ++F + +D ISWNSII G V NGL ++GL
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F QML++ I+ + S+ CA + LG+ +H ++ F ++LLDMY+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG++ A+ +F +M +VS+T++I G A G A +A+ LFE+ME++G+ P+ A
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 249 VLTACSHAGLIDKA-----WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
VL C+ L+D+ W N + D ++ A+ D+ + G +QEA S
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN------ALMDMYAKCGSMQEAELVFS 456
Query: 304 NMH 306
M
Sbjct: 457 EMR 459
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D++SWN++I G NGL E+ L++ QM ++ D T+ SV AD + G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H ++ ++L++MY+KC ++ + +F + + +S+ S+IAG +
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E +K F +M I P + ++++ CA L GK++H I N ++F++
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFE-QMEKDGV 239
++L+DMYAKCG+++ A +F +M + DI+SW +I G + + A++A+SLF +E+
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 240 KPNSVAFVAVLTACSHAGLIDKA 262
P+ VL AC+ DK
Sbjct: 496 SPDERTVACVLPACASLSAFDKG 518
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 135/250 (54%), Gaps = 2/250 (0%)
Query: 10 NTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIR 69
NT + +G E A+ ++ G ++ P TL SVL + AD + GKE+ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 70 HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKF 129
+G + +GS L MY C ++++ R+F + ++ A+ WN ++ ++G F +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 130 FRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK 189
F++M+ + ++ +FS + + + L ++H G+QLHG I+++GF + + +SL+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 190 CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAV 249
+ AR +FD+M D++SW ++I G +G A +S+F QM G++ + V+V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 250 LTACSHAGLI 259
C+ + LI
Sbjct: 303 FAGCADSRLI 312
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/516 (44%), Positives = 328/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D+VSWN +I G A G Y+EAL + + M N++PD T+ +V+ A + G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H + HG +N+ I ++LI++Y+KC +E + LF LP KD ISWN++I G
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR--NGFDDNMF 178
L+ E L F++ML + P V+ SI+PACAHL + +G+ +H I + G +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL+DMYAKCG+I A +F+ + + SW A+I G A+HG A + LF +M K G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
++P+ + FV +L+ACSH+G++D F +MT+DY + P EHY + DLLG +G +EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
E I+ M P +W +LL AC++H NVEL AE + I+P N G+YV+LSN YA+A
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW + A R + +KGMKK P CS IE+ + + F+ GDK HP I L+E+ +
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E+ G+VPDT EVL ++EEE K+ L +HSE+LAI FG+I T GT + I+KNLRVC +CH
Sbjct: 646 EKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 705
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K ISKI +REII RD +RFHHF DG CSC DYW
Sbjct: 706 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 179/334 (53%), Gaps = 34/334 (10%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+L+ WNT+ G A + AL + M ++ L P+S+T VL A +G++IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSH---------------------------- 96
G+ ++ G D ++ + +SLI+MY + R+ED+H
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 97 ---RLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
+LF +PVKD +SWN++I+G + G + E L+ F+ M+ ++P + +++ ACA
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
++ LG+Q+H I +GF N+ I ++L+D+Y+KCG + A +F+++ D++SW
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 214 VIMGNALHGNAH-DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKA-WSYFNSMTK 271
+I G H N + +A+ LF++M + G PN V +++L AC+H G ID W + +
Sbjct: 338 LI-GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 272 DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
G+ + ++ D+ + G ++ A++ +++
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLD---MYAKCGNIRLARCIFDKM 203
S++ C L +L + +H +I+ G + + S L++ + + A +F +
Sbjct: 38 SLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
+++ W + G+AL + A+ L+ M G+ PNS F VL +C+ + +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSAC 321
+ K G + ++ + + G+L++A++ P +V + L+
Sbjct: 155 QIHGHVLK-LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK---SPHRDVVSYTALIKGY 210
Query: 322 RVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASL 367
+E A K+ ++I + D + A + + YA +K+A L
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMI---SGYAETGNYKEALEL 253
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/515 (43%), Positives = 331/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D VS+N VI ++ YE +L+ R+M + +F +++L I A+ + G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H A+ D+ + +G+SL++MYAKC E++ +F LP + +SW ++I+G VQ
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL GLK F +M + ++ +F++++ A A +L LGKQLH IIR+G +N+F
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG 490
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
S L+DMYAKCG+I+ A +F++M + VSW A+I +A +G+ AI F +M + G++
Sbjct: 491 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV+ + VLTACSH G +++ YF +M+ YGI P +HYA + DLLGR G+ EA +
Sbjct: 551 PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 610
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDP-NNMGAYVILSNTYAAAR 359
+ M P E +W ++L+ACR+HKN LA + AEK+F ++ + AYV +SN YAAA
Sbjct: 611 LMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
W+ ++ MR +G+KK PA SW+EV +K + F + D++HP I + EL +E
Sbjct: 671 EWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGY PDT V+ DV+E+ K L YHSERLA+ F +I TP+G I ++KNLR C DCH
Sbjct: 731 REGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHA 790
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIK ISKIV+REI VRD SRFHHF +G CSCGDYW
Sbjct: 791 AIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D V++NT+I G ++GLY E++++ +M +P FT S VL D G
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H ++ G + +G+ +++ Y+K RV ++ LF +P D +S+N +I+ Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L FFR+M R+ F++++ A+L++L +G+QLH + D + +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKC A IF + VSWTA+I G G + LF +M ++
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 241 PNSVAFVAVLTACSHAG--LIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ F VL A + L+ K F + + + F + + D+ + G +++A
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAF--IIRSGNLENVFSG-SGLVDMYAKCGSIKDA 506
Query: 299 YEFISNMHAGPTENV--WLTLLSA 320
+ M P N W L+SA
Sbjct: 507 VQVFEEM---PDRNAVSWNALISA 527
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 4/255 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN--LKPDSFTLSSVLPIFADYVDVI 58
MP +V+W ++ ARN ++EA + RQM + PD T +++LP D V
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 59 KGKEIHGYAIRHGLDAN--VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
++H +A++ G D N + + + L+ Y + R++ + LF +P KD++++N++I G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
++GL+ E + F +M + +P +FS ++ A L LG+QLH + GF +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + +LD Y+K + R +FD+M D VS+ VI + ++ F +M+
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 237 DGVKPNSVAFVAVLT 251
G + F +L+
Sbjct: 345 MGFDRRNFPFATMLS 359
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
N +++I+ + K V + LF +P + ++W ++ +N FDE K FRQM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 135 IAK--IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS--LLDMYAKC 190
+ P HV+F++++P C + Q+H ++ GFD N F+ S LL Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 191 GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+ LA +F+++ D V++ +I G G ++I LF +M + G +P+ F VL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 251 TA 252
A
Sbjct: 258 KA 259
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+++ II+ GFD + ++ +++ + G + AR ++D+M + VS +I G+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
G+ A LF+ M V V + ++ + D+A+ F M +
Sbjct: 93 GDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQMCR 138
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 329/510 (64%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WN ++ G ++ + L + M + D FTL++V + +GK++H
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
YAI+ G D ++ + S +++MY KC + + F +PV D ++W ++I+GC++NG +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
F QM + + P + +++ A + LT L G+Q+H ++ ++ F+ +SL+
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG+I A C+F ++++ +I +W A+++G A HG + + LF+QM+ G+KP+ V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL+ACSH+GL+ +A+ + SM DYGI P EHY+ +AD LGRAG +++A I +
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M + +++ TLL+ACRV + E +VA K+ ++P + AYV+LSN YAAA +W +
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ +KK P SWIEVKNK + FV D+S+ I +K+++ ++QEGYV
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T L DVEEE+K+ LYYHSE+LA+ FG++ TP T IR+IKNLRVCGDCH A+K+I
Sbjct: 901 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYI 960
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K+ REI++RD +RFH F+DG CSCGDYW
Sbjct: 961 AKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
VS+++ N + +G Y L M +++ D T +L + G++
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H A++ GLD + + +SLINMY K + + +F + +D ISWNS+IAG QNGL
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTT-LHLGKQLHGCIIRNGFDDNMFIAS 181
E + F Q+L +KP + +S++ A + L L L KQ+H I+ + F+++
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+D Y++ ++ A +F++ + D+V+W A++ G + H + LF M K G +
Sbjct: 457 ALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS 515
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH----YAAVADLLGRAGKLQE 297
+ V C I++ Y I ++ + + D+ + G +
Sbjct: 516 DDFTLATVFKTCGFLFAINQG-----KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 298 AYEFISNMHAGPTENVWLTLLSAC 321
A +F + P + W T++S C
Sbjct: 571 A-QFAFDSIPVPDDVAWTTMISGC 593
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+PV D V+W T+I G NG E A ++ QM + + PD FT++++ + + +G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IH A++ + +G+SL++MYAKC ++D++ LF + + + +WN+++ G Q+
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL-----HLGKQLHGCIIRNGFDD 175
G E L+ F+QM IKP V+F ++ AC+H + H+ + +HG G
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM-RSMHG---DYGIKP 753
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+ S L D + G ++ A + + M +
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESMSME 784
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 32/254 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D+V WN ++ G EEA+++ + L P+ TL + I D D
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---A 262
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ +A +G DA+ V + I N ++ + +
Sbjct: 263 GQVKSFA--NGNDAS---------------------------SVSEIIFRNKGLSEYLHS 293
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + LK F M+ + ++ V+F ++ + +L LG+Q+H ++ G D + ++
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL++MY K AR +FD M D++SW +VI G A +G +A+ LF Q+ + G+K
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 241 PNSVAFVAVLTACS 254
P+ +VL A S
Sbjct: 414 PDQYTMTSVLKAAS 427
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D++ GK H + + + ++LI+MY+KC + + R+F +P +D +SWNSI+A
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 116 GCVQNGL-----FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
Q+ + FR + + ++ S ++ C H + + HG +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
G D + F+A +L+++Y K G ++ + +F++M D+V W ++ G +AI L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 231 FEQMEKDGVKPNSVAF 246
G+ PN +
Sbjct: 234 SSAFHSSGLNPNEITL 249
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGL-----YEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV 55
MP DLVSWN+++ A++ ++A + R + + TLS +L +
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
V + HGYA + GLD + + +L+N+Y K +V++ LF +P +D + WN ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSF 145
++ G +E + + + P ++
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/510 (43%), Positives = 331/510 (64%), Gaps = 1/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
++VSWN++I +N +EA+ I ++M + +KP ++ L AD D+ +G+ IH
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ GLD NV + +SLI+MY KC V+ + +F L + +SWN++I G QNG
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ L +F QM +KP ++ S++ A A L+ H K +HG ++R+ D N+F+ ++L+
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG I +AR IFD M + +W A+I G HG A+ LFE+M+K +KPN V
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F++V++ACSH+GL++ F M ++Y I S +HY A+ DLLGRAG+L EA++FI
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P NV+ +L AC++HKNV A K AE++F ++P++ G +V+L+N Y AA W+
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKV 660
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
+RV M +G++KTP CS +E+KN+ ++F +G +HP +I L++L+ +++ GYV
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT VL VE + K+ LL HSE+LAI FG++ T GTTI + KNLRVC DCH A K+I
Sbjct: 721 PDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REI+VRD RFHHF++G CSCGDYW
Sbjct: 780 SLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 155/262 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLVSWNT++ G ++NG+ AL +V+ M NLKP T+ SVLP + + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
KEIHGYA+R G D+ V I ++L++MYAKC +E + +LF + ++ +SWNS+I VQN
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E + F++ML +KP VS + ACA L L G+ +H + G D N+ +
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY KC + A +F K+ +VSW A+I+G A +G DA++ F QM VK
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 241 PNSVAFVAVLTACSHAGLIDKA 262
P++ +V+V+TA + + A
Sbjct: 436 PDTFTYVSVITAIAELSITHHA 457
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 156/256 (60%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V ++T++ G A+ ++AL +M +++P + + +L + D ++ GKEIHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ G ++ + L NMYAKC +V ++ ++F +P +D +SWN+I+AG QNG+
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ + M +KP ++ S++PA + L + +GK++HG +R+GFD + I+++L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YAKCG++ AR +FD M ++VSW ++I + N +A+ +F++M +GVKP V+
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 247 VAVLTACSHAGLIDKA 262
+ L AC+ G +++
Sbjct: 341 MGALHACADLGDLERG 356
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 128/249 (51%), Gaps = 9/249 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++I ++GL + L++++ + V+++ R+F + K + +++++ G +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D+ L+FF +M ++P +F+ ++ C L +GK++HG ++++GF ++F
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L +MYAKC + AR +FD+M D+VSW ++ G + +G A A+ + + M ++ +K
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHY----AAVADLLGRAGKLQ 296
P+ + V+VL A S LI Y + F+ A+ D+ + G L+
Sbjct: 234 PSFITIVSVLPAVSALRLIS-----VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 297 EAYEFISNM 305
A + M
Sbjct: 289 TARQLFDGM 297
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 334/515 (64%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNV-NLKPDSFTLSSVLPIFADYVDVIK 59
M D SW ++ G + EEAL + M V N +P+ FT+S + A + +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GKEIHG+ +R GLD++ + SSL++MY KC ++++ +F + KD +SW S+I +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+ + EG F +++ + +P +F+ ++ ACA LTT LGKQ+HG + R GFD F
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SSL+DMY KCGNI A+ + D D+VSWT++I G A +G +A+ F+ + K G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
KP+ V FV VL+AC+HAGL++K +F S+T+ + ++ + +HY + DLL R+G+ ++
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
IS M P++ +W ++L C + N++LA + A+++F I+P N YV ++N YAAA
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
+W++ +R M+ G+ K P SW E+K K + F+A D SHP Y++I E L+EL ++M+
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+EGYVP T VLHDVE+EQK+ L YHSE+LA+ F I+ T +GT I++ KNLR C DCH
Sbjct: 597 EEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHG 656
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFIS I +R+I VRD++RFH FE+G+CSCGDYW
Sbjct: 657 AIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 45/352 (12%)
Query: 12 VIVGLARNGLYEEALNI----------VRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
V+ L R + EA+++ V+ +G KP + T +++ + + + +GK
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAK-KPPASTYCNLIQVCSQTRALEEGK 105
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP------------------ 103
++H + G + I + L+ MYAKC + D+ ++F +P
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165
Query: 104 -------------VKDAISWNSIIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIM 149
KD+ SW +++ G V+ +E L + M + +P + S +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
A A + + GK++HG I+R G D + + SSL+DMY KCG I AR IFDK+ D+V
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
SWT++I + SLF ++ +PN F VL AC+ + M
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSAC 321
T+ G P +++ D+ + G ++ A + P W +L+ C
Sbjct: 346 TR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC-PKPDLVSWTSLIGGC 395
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 126 GLKFFR---QMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
G K R Q+L KP ++ +++ C+ L GK++H I +GF + I +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKP 241
LL MYAKCG++ AR +FD+M D+ SW ++ G A G +A LF++M EKD
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD---- 181
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP-----SFEHYAAVADLLGRAGKLQ 296
S ++ A++T ++A ++ M + P S AA A R GK
Sbjct: 182 -SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK-- 238
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
E + I E +W +L+ ++ A + +KI D + ++ + + Y
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD---VVSWTSMIDRYF 295
Query: 357 AARRWKDAASL 367
+ RW++ SL
Sbjct: 296 KSSRWREGFSL 306
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/523 (43%), Positives = 328/523 (62%), Gaps = 14/523 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V+W+ I G A+ GL EAL + RQM + +KP+ TL SVL A ++ GKEIH
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 65 GYAIRHGLD--------ANVCIGSSLINMYAKCARVEDSHRLFCLLPVK--DAISWNSII 114
YAI++ +D N+ I + LI+MYAKC +V+ + +F L K D ++W +I
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 115 AGCVQNGLFDEGLKFFRQMLI--AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG 172
G Q+G ++ L+ +M + +P + S + ACA L L +GKQ+H +RN
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 173 FDD-NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
+ +F+++ L+DMYAKCG+I AR +FD M + V+WT+++ G +HG +A+ +F
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
++M + G K + V + VL ACSH+G+ID+ YFN M +G++P EHYA + DLLGR
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGR 627
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG+L A I M P VW+ LS CR+H VEL AEKI + N+ G+Y +L
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
SN YA A RWKD +R MR+KG+KK P CSW+E F GDK+HP I + L
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
+ ++R++ GYVP+T LHDV++E+K +LL+ HSE+LA+ +GI+ TP G IRI KNL
Sbjct: 748 LDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNL 807
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVCGDCHTA ++S+I+ +II+RD+SRFHHF++G CSC YW
Sbjct: 808 RVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 185/378 (48%), Gaps = 50/378 (13%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGN-VNLKPDSFTLSSVLPIFADYVDVIK 59
M V D+VSWN++I A+ G + AL + +M N +PD+ TL +VLP A
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
GK++H +A+ + N+ +G+ L++MYAKC +++++ +F + VKD +SWN+++AG Q
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 120 NGLFDEGLKFF-----------------------------------RQMLIAKIKPRHVS 144
G F++ ++ F RQML + IKP V+
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 145 FSSIMPACAHLTTLHLGKQLHGCII-------RNGFDDNMFIASSLLDMYAKCGNIRLAR 197
S++ CA + L GK++H I +NG D + + L+DMYAKC + AR
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 198 CIFDKMDL--HDIVSWTAVIMGNALHGNAHDAISLFEQM-EKD-GVKPNSVAFVAVLTAC 253
+FD + D+V+WT +I G + HG+A+ A+ L +M E+D +PN+ L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 254 -SHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
S A L + ++ P F + D+ + G + +A NM A E
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI-DMYAKCGSISDARLVFDNMMA-KNEV 545
Query: 313 VWLTLLSACRVHKNVELA 330
W +L++ +H E A
Sbjct: 546 TWTSLMTGYGMHGYGEEA 563
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 4/302 (1%)
Query: 2 PVSD--LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIK 59
P SD + WN++I NG + L + M +++ PD++T V + V
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ H ++ G +NV +G++L+ MY++C + D+ ++F + V D +SWNSII +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 120 NGLFDEGLKFFRQMLIA-KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G L+ F +M +P +++ +++P CA L T LGKQLH + + NMF
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ + L+DMYAKCG + A +F M + D+VSW A++ G + G DA+ LFE+M+++
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+K + V + A ++ + GL +A M GI P+ +V G L
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHG 384
Query: 299 YE 300
E
Sbjct: 385 KE 386
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + V+W +++ G +G EEAL I +M + K D TL VL + + +G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 61 KEIHG-----YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSII 114
E + + G + C L+++ + R+ + RL +P++ + W + +
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYAC----LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Query: 115 AGCVQNGLFDEG 126
+ C +G + G
Sbjct: 655 SCCRIHGKVELG 666
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/510 (42%), Positives = 325/510 (63%), Gaps = 3/510 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V++N +I G NG E +L++ +++ + S TL S++P+ + + IH
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IH 342
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
GY ++ ++ + ++L +Y+K +E + +LF P K SWN++I+G QNGL +
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
+ + FR+M ++ P V+ + I+ ACA L L LGK +H + F+ +++++++L+
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I AR +FD M + V+W +I G LHG +A+++F +M G+ P V
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F+ VL ACSHAGL+ + FNSM YG PS +HYA + D+LGRAG LQ A +FI
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEA 582
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P +VW TLL ACR+HK+ LA V+EK+F +DP+N+G +V+LSN ++A R + A
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQA 642
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A++R + + + K P + IE+ + F +GD+SHP I E L++L +M + GY
Sbjct: 643 ATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQ 702
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P+T+ LHDVEEE+++ ++ HSERLAI FG+I T GT IRIIKNLRVC DCHT K I
Sbjct: 703 PETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLI 762
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKI +R I+VRD +RFHHF+DG CSCGDYW
Sbjct: 763 SKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 170/339 (50%), Gaps = 10/339 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D + WNT+I G +N +Y E++ + R + N + + D+ TL +LP A+ ++
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G +IH A + G ++ + + I++Y+KC +++ LF D +++N++I G
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NG + L F++++++ + R + S++P HL ++ +HG +++ F + +
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASV 356
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+++L +Y+K I AR +FD+ + SW A+I G +G DAISLF +M+K
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V +L+AC+ G + + + + + S A+ + + G + EA
Sbjct: 417 SPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
++ E W T++S +H G+ A IF
Sbjct: 476 RLF-DLMTKKNEVTWNTMISGYGLHGQ----GQEALNIF 509
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 140/257 (54%), Gaps = 2/257 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
D+ +N ++ G + N +L++ + + +LKP+S T + + + + D G+ I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG A+ G D+ + +GS+++ MY K RVED+ ++F +P KD I WN++I+G +N ++
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 124 DEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E ++ FR ++ + + I+PA A L L LG Q+H + G + ++ +
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
+ +Y+KCG I++ +F + DIV++ A+I G +G ++SLF+++ G +
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 243 SVAFVAVLTACSHAGLI 259
S V+++ H LI
Sbjct: 322 SSTLVSLVPVSGHLMLI 338
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 137/252 (54%), Gaps = 4/252 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P L SWN +I G +NGL E+A+++ R+M P+ T++ +L A + GK
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+H ++++ + ++LI MYAKC + ++ RLF L+ K+ ++WN++I+G +G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCII-RNGFDDNMFIA 180
E L F +ML + I P V+F ++ AC+H + G ++ +I R GF+ ++
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+ ++D+ + G+++ A + M + S W ++ +H + + A ++ E++ + +
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--L 618
Query: 240 KPNSVAFVAVLT 251
P++V + +L+
Sbjct: 619 DPDNVGYHVLLS 630
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHG 222
Q H II +GF +++ + + L + G I AR IF + D+ + ++ G +++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 223 NAHDAISLFEQMEKDG-VKPNSVAFVAVLTACS 254
+ H ++S+F + K +KPNS + ++A S
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 327/514 (63%), Gaps = 6/514 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++VSW +I G +N EEA+++ +M ++P+ FT S +L VI E
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSE 414
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H ++ + + +G++L++ Y K +VE++ ++F + KD ++W++++AG Q G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHL-TTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ +K F ++ IKP +FSSI+ CA ++ GKQ HG I++ D ++ ++S
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+LL MYAK GNI A +F + D+VSW ++I G A HG A A+ +F++M+K VK
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ V F+ V AC+HAGL+++ YF+ M +D IAP+ EH + + DL RAG+L++A +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 302 ISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRW 361
I NM +W T+L+ACRVHK EL AEKI + P + AYV+LSN YA + W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 362 KDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE 421
++ A +R M + +KK P SWIEVKNK Y+F+AGD+SHP +I L++L R++
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 422 GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAI 481
GY PDT VL D+++E K+ +L HSERLAI FG+I TP G+ + IIKNLRVCGDCH I
Sbjct: 775 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVI 834
Query: 482 KFISKIVQREIIVRDNSRFHHF-EDGKCSCGDYW 514
K I+KI +REI+VRD++RFHHF DG CSCGD+W
Sbjct: 835 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 169/306 (55%), Gaps = 6/306 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++V+W T+I G ARN + +E L + +M N +P+SFT ++ L + A+ +G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++H +++GLD + + +SLIN+Y KC V + LF VK ++WNS+I+G N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL E L F M + ++ SF+S++ CA+L L +QLH +++ GF + I
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 181 SSLLDMYAKCGNIRLARCIFDKMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+ Y+KC + A +F ++ + ++VSWTA+I G + +A+ LF +M++ GV
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + +LTA +I + + + +Y + + A+ D + GK++EA
Sbjct: 394 RPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAA 448
Query: 300 EFISNM 305
+ S +
Sbjct: 449 KVFSGI 454
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 145/254 (57%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P D S+ +++ G +R+G +EA + + + ++ D SSVL + A D + G+
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGR 113
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++H I+ G +V +G+SL++ Y K + +D ++F + ++ ++W ++I+G +N
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
+ DE L F +M +P +F++ + A G Q+H +++NG D + +++
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
SL+++Y KCGN+R AR +FDK ++ +V+W ++I G A +G +A+ +F M + V+
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 242 NSVAFVAVLTACSH 255
+ +F +V+ C++
Sbjct: 294 SESSFASVIKLCAN 307
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%)
Query: 90 ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIM 149
+R+ ++H LF P +D S+ S++ G ++G E + F + ++ FSS++
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
A L G+QLH I+ GF D++ + +SL+D Y K N + R +FD+M ++V
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+WT +I G A + + ++LF +M+ +G +PNS F A L + G+
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 327/516 (63%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DL+SWN++I N A+++ ++M ++PD TL S+ I + D+
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 61 KEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ + G+ +R G ++ IG++++ MYAK V+ + +F LP D ISWN+II+G Q
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 120 NGLFDEGLKFFRQMLI-AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
NG E ++ + M +I ++ S++PAC+ L G +LHG +++NG ++F
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ +SL DMY KCG + A +F ++ + V W +I + HG+ A+ LF++M +G
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
VKP+ + FV +L+ACSH+GL+D+ F M DYGI PS +HY + D+ GRAG+L+ A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+FI +M P ++W LLSACRVH NV+L +E +F ++P ++G +V+LSN YA+A
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 667
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
+W+ +R KG++KTP S +EV NK F G+++HP Y + L L ++
Sbjct: 668 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 727
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+ GYVPD + VL DVE+++K+++L HSERLAI F +I TP TTIRI KNLRVCGDCH
Sbjct: 728 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 787
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KFISKI +REIIVRD++RFHHF++G CSCGDYW
Sbjct: 788 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 196/358 (54%), Gaps = 14/358 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+ SWN +I G ++G +EAL + + + DS T+ S+L + D +G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG 266
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
IH Y+I+HGL++ + + + LI++YA+ R+ D ++F + V+D ISWNSII N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFI 179
+ F++M +++I+P ++ S+ + L + + + G +R G F +++ I
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG- 238
++++ MYAK G + AR +F+ + D++SW +I G A +G A +AI ++ ME++G
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ N +V+VL ACS AG + + + K+ G+ ++AD+ G+ G+L++A
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 299 YEFISNMHAGPTENV--WLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
+S + P N W TL++ H + E A + +++ + P+++ +LS
Sbjct: 506 ---LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLF 99
+S + V +F ++ K +H + NVCI + L+N+Y V + F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 100 CLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ-MLIAKIKPRHVSFSSIMPACAHLTTL 158
+ +D +WN +I+G + G E ++ F ML + + P + +F S++ AC T+
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 166
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
G ++H ++ GF ++++A+SL+ +Y++ + AR +FD+M + D+ SW A+I G
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 219 ALHGNAHDAISLFEQMEKDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAP 277
GNA +A++L +G++ +SV V++L+AC+ AG ++ + +S + +G+
Sbjct: 227 CQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLES 280
Query: 278 SFEHYAAVADLLGRAGKLQEAYEFISNMH 306
+ DL G+L++ + M+
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 331/510 (64%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
LVSWNT+I RN + EAL+I +M N K FT+SSVL D ++ K++H
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+++ +D N+ +G++L+++YAKC ++D+ ++F + K +++W+S++AG VQN ++
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L +R+ ++ + SS++ AC++L L GKQ+H I ++GF N+F+ASS +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYAKCG++R + IF ++ ++ W +I G A H + + LFE+M++DG+ PN V
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
F ++L+ C H GL+++ +F M YG++P+ HY+ + D+LGRAG L EAYE I +
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
+ PT ++W +LL++CRV+KN+ELA AEK+F ++P N G +V+LSN YAA ++W++
Sbjct: 426 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 485
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A R +R+ +KK SWI++K+K + F G+ HP I L L+ + + GY
Sbjct: 486 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYK 545
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
P + LHDVE +K+ LL HSE+LA+VFG++C P+ + +RI+KNLR+C DCH +K
Sbjct: 546 PSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAA 605
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S +R IIVRD +RFHHF DG CSCGD+W
Sbjct: 606 SMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 47 VLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKD 106
+L + A V++ K HG IR L+ +V + + LIN Y+KC VE + ++F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 107 AISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHG 166
+SWN++I +N + E L F +M K + SS++ AC K+LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 167 CIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHD 226
++ D N+++ ++LLD+YAKCG I+ A +F+ M V+W++++ G + N +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 227 AISLFEQMEKDGVKPNSVAFVAVLTACSH-AGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
A+ L+ + ++ ++ N +V+ ACS+ A LI+ +++ G + ++
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG--KQMHAVICKSGFGSNVFVASSA 304
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
D+ + G L+E+Y S + E +W T++S H
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLE-LWNTIISGFAKH 342
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 325/514 (63%), Gaps = 5/514 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I ++ ++++AL ++ M N++P+ +T SSVL DV
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--- 178
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H I+ GL+++V + S+LI+++AK ED+ +F + DAI WNSII G QN
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
D L+ F++M A + +S++ AC L L LG Q H I++ +D ++ +
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMY KCG++ A +F++M D+++W+ +I G A +G + +A+ LFE+M+ G K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + V VL ACSHAGL++ W YF SM K YGI P EHY + DLLG+AGKL +A +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
++ M P W TLL ACRV +N+ LA A+K+ +DP + G Y +LSN YA +++
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +R MR++G+KK P CSWIEV + +AF+ GD SHP +++ L +L+ R+
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
GYVP+T VL D+E EQ ++ L +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVF 596
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K SK+ R I++RD R+HHF+DGKCSCGDYW
Sbjct: 597 CKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 132/257 (51%), Gaps = 9/257 (3%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
LINMY K + D+H+LF +P ++ ISW ++I+ + + + L+ ML ++P
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
++SS++ +C ++ + + LH II+ G + ++F+ S+L+D++AK G A +FD
Sbjct: 162 VYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 202 KMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDK 261
+M D + W ++I G A + + A+ LF++M++ G +VL AC+ L++
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 262 AWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+ K D + + A+ D+ + G L++A + M W T++S
Sbjct: 279 GMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKERDV-ITWSTMISG 333
Query: 321 CRVHKNVELAGKVAEKI 337
+ + A K+ E++
Sbjct: 334 LAQNGYSQEALKLFERM 350
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/549 (41%), Positives = 339/549 (61%), Gaps = 35/549 (6%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
M D+V+WN++I G + G AL+I +M + L PD FTL+SVL A+ +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRL--------------------- 98
GK+IH + + G D + + ++LI+MY++C VE + RL
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 99 ------------FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFS 146
F L +D ++W ++I G Q+G + E + FR M+ +P + +
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 147 SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLH 206
+++ + L +L GKQ+HG +++G ++ ++++L+ MYAK GNI A FD +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 207 -DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
D VSWT++I+ A HG+A +A+ LFE M +G++P+ + +V V +AC+HAGL+++ Y
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
F+ M I P+ HYA + DL GRAG LQEA EFI M P W +LLSACRVHK
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 326 NVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWI 385
N++L AE++ +++P N GAY L+N Y+A +W++AA +R M++ +KK SWI
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 386 EVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYY 445
EVK+K + F D +HP + I +K++ + +++ GYVPDT VLHD+EEE K+ +L +
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 446 HSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFED 505
HSE+LAI FG+I TPD TT+RI+KNLRVC DCHTAIKFISK+V REIIVRD +RFHHF+D
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 506 GKCSCGDYW 514
G CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 180/404 (44%), Gaps = 66/404 (16%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P D VSW T+IVG G Y +A+ ++ M ++P FTL++VL A + G
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K++H + ++ GL NV + +SL+NMYAKC + +F + V+D SWN++IA +Q
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 121 GLFDEGLKFFRQM--------------------------LIAK------IKPRHVSFSSI 148
G D + F QM + +K + P + +S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR----------- 197
+ ACA+L L +GKQ+H I+ GFD + + ++L+ MY++CG + AR
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 198 ----------------------CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
IF + D+V+WTA+I+G HG+ +AI+LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKL 295
G +PNS A+L+ S + S K G S A+ + +AG +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNI 464
Query: 296 QEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM 339
A + W +++ A H + E A ++ E + M
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 37/255 (14%)
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+H I+ GL +V + ++L+N+Y+K + +LF +P++ A SWN++++ + G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 123 FDEGLKFFRQ-------------------------------MLIAKIKPRHVSFSSIMPA 151
D +FF Q M+ I+P + ++++ +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
A + GK++H I++ G N+ +++SLL+MYAKCG+ +A+ +FD+M + DI SW
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 212 TAVIMGNALHGNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMT 270
A+I + G A++ FEQM E+D V NS +++ + G +A F+ M
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS-----MISGFNQRGYDLRALDIFSKML 270
Query: 271 KDYGIAPSFEHYAAV 285
+D ++P A+V
Sbjct: 271 RDSLLSPDRFTLASV 285
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/508 (42%), Positives = 319/508 (62%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNL-KPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WNT+I G A G A ++ R+M L +PD+ T ++ DV G+ IH
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR G + + + +SL+++YA C V ++++F +P KD ++WNS+I G +NG +E L
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
+ +M IKP + S++ ACA + L LGK++H +I+ G N+ ++ LLD+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK-DGVKPNSVAF 246
A+CG + A+ +FD+M + VSWT++I+G A++G +AI LF+ ME +G+ P + F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V +L ACSH G++ + + YF M ++Y I P EH+ + DLL RAG++++AYE+I +M
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W TLL AC VH + +LA +I ++PN+ G YV+LSN YA+ +RW D
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M G+KK P S +EV N+ + F+ GDKSHP I LKE+ R+ EGYVP
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
V DVEEE+K+N + YHSE++AI F +I TP+ + I ++KNLRVC DCH AIK +SK
Sbjct: 508 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 567
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ REI+VRD SRFHHF++G CSC DYW
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 9/257 (3%)
Query: 56 DVIKGKEIHGYAIRHGLD-ANVCIGSSLINMYAKCAR---VEDSHRLFCLL--PVKDAIS 109
+ K ++IH ++IRHG+ ++ +G LI + +H++F + P+ +
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NVFI 87
Query: 110 WNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCI 168
WN++I G + G +R+M ++ ++P ++ ++ A + + LG+ +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 169 IRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAI 228
IR+GF +++ +SLL +YA CG++ A +FDKM D+V+W +VI G A +G +A+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 229 SLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADL 288
+L+ +M G+KP+ V++L+AC+ G + M K G+ + + DL
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDL 266
Query: 289 LGRAGKLQEAYEFISNM 305
R G+++EA M
Sbjct: 267 YARCGRVEEAKTLFDEM 283
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 134/246 (54%), Gaps = 7/246 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP DLV+WN+VI G A NG EEAL + +M + +KPD FT+ S+L A + G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H Y I+ GL N+ + L+++YA+C RVE++ LF + K+++SW S+I G N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 121 GLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E ++ F+ M + + P ++F I+ AC+H + G + + +R + I
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRI 360
Query: 180 A--SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
++D+ A+ G ++ A M + ++V W ++ +HG++ ++ F +++
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQI 418
Query: 237 DGVKPN 242
++PN
Sbjct: 419 LQLEPN 424
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/523 (41%), Positives = 330/523 (63%), Gaps = 9/523 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM------GNVNLKPDSFTLSSVLPIFADY 54
+P ++VSW ++I G NG +A+++ + + + + DS L SV+ +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 55 VDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCAR--VEDSHRLFCLLPVKDAISWNS 112
+ IH + I+ G D V +G++L++ YAK V + ++F + KD +S+NS
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 113 IIAGCVQNGLFDEGLKFFRQMLIAKIKPRH-VSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
I++ Q+G+ +E + FR+++ K+ + ++ S+++ A +H L +GK +H +IR
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +D++ + +S++DMY KCG + AR FD+M ++ SWTA+I G +HG+A A+ LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 232 EQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGR 291
M GV+PN + FV+VL ACSHAGL + W +FN+M +G+ P EHY + DLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 292 AGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVIL 351
AG LQ+AY+ I M P +W +LL+ACR+HKNVELA ++F +D +N G Y++L
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 352 SNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEAL 411
S+ YA A RWKD +R+ M+N+G+ K P S +E+ + + F+ GD+ HP +I E L
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 412 KELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNL 471
EL ++ + GYV +T V HDV+EE+K+ L HSE+LAI FGI+ T G+T+ ++KNL
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 472 RVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
RVC DCH IK ISKIV RE +VRD RFHHF+DG CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 17/365 (4%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+D+ SWN+VI LAR+G EAL M ++L P + + + D+ GK+
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H A G +++ + S+LI MY+ C ++ED+ ++F +P ++ +SW S+I G NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 124 DEGLKFFRQMLIAKIKPRHVSF------SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+ + F+ +L+ + F S++ AC+ + L + +H +I+ GFD +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 178 FIASSLLDMYAKCGN--IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
+ ++LLD YAK G + +AR IFD++ D VS+ +++ A G +++A +F ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 236 KDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
K+ V N++ VL A SH+G + + + + G+ ++ D+ + G+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGR 337
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF--MIDPNNMGAYVILS 352
++ A + M + W +++ +H + A K E +F MID Y+
Sbjct: 338 VETARKAFDRMKNKNVRS-WTAMIAGYGMHGH---AAKALE-LFPAMIDSGVRPNYITFV 392
Query: 353 NTYAA 357
+ AA
Sbjct: 393 SVLAA 397
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/519 (40%), Positives = 331/519 (63%), Gaps = 13/519 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
WN +I G ++N +EAL + M + L +S T++ V+P + + IHG+
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
++ GLD + + ++L++MY++ +++ + R+F + +D ++WN++I G V + ++ L
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 128 KFFRQML-----IAK------IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
+M ++K +KP ++ +I+P+CA L+ L GK++H I+N +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+ + S+L+DMYAKCG ++++R +FD++ ++++W +IM +HGN +AI L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
GVKPN V F++V ACSH+G++D+ F M DYG+ PS +HYA V DLLGRAG+++
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 297 EAYEFISNMHAGPTE-NVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTY 355
EAY+ ++ M + W +LL A R+H N+E+ A+ + ++PN YV+L+N Y
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 731
Query: 356 AAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELL 415
++A W A +R M+ +G++K P CSWIE ++ + FVAGD SHP +++ L+ L
Sbjct: 732 SSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLW 791
Query: 416 ERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCG 475
ERM +EGYVPDT VLH+VEE++K+ LL HSE+LAI FGI+ T GT IR+ KNLRVC
Sbjct: 792 ERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCN 851
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A KFISKIV REII+RD RFH F++G CSCGDYW
Sbjct: 852 DCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 180/346 (52%), Gaps = 29/346 (8%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DLV+WNTV+ L +N EAL +R+M ++PD FT+SSVLP + + GKE+H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
YA+++G LD N +GS+L++MY C +V R+F + + WN++IAG QN
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 124 DEGLKFFRQM-LIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L F M A + + + ++PAC + +HG +++ G D + F+ ++
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME------- 235
L+DMY++ G I +A IF KM+ D+V+W +I G + DA+ L +M+
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 236 ----KDGVKPNSVAFVAVLTACSHAGLIDK-----AWSYFNSMTKDYGIAPSFEHYAAVA 286
+ +KPNS+ + +L +C+ + K A++ N++ D + +A+
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG------SALV 559
Query: 287 DLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVHKNVELA 330
D+ + G LQ + + + P +NV W ++ A +H N + A
Sbjct: 560 DMYAKCGCLQMSRKVFDQI---PQKNVITWNVIIMAYGMHGNGQEA 602
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 7/305 (2%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYV---DVIKGKEI 63
VSWN++I L +E AL R M + N++P SFTL SV+ ++ ++ GK++
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
H Y +R G + N I ++L+ MY K ++ S L +D ++WN++++ QN
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASS 182
E L++ R+M++ ++P + SS++PAC+HL L GK+LH ++NG D+N F+ S+
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GVKP 241
L+DMY C + R +FD M I W A+I G + + + +A+ LF ME+ G+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
NS V+ AC +G + + + K G+ + D+ R GK+ A
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 302 ISNMH 306
M
Sbjct: 463 FGKME 467
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 135/256 (52%), Gaps = 7/256 (2%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG--Y 66
W ++ R+ L EA+ M + +KPD++ ++L AD D+ GK+IH Y
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+G+D+ V + ++L+N+Y KC +++F + ++ +SWNS+I+ ++
Sbjct: 125 KFGYGVDS-VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTT---LHLGKQLHGCIIRNGFDDNMFIASSL 183
L+ FR ML ++P + S++ AC++L L +GKQ+H +R G + N FI ++L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY K G + ++ + D+V+W V+ + +A+ +M +GV+P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 244 VAFVAVLTACSHAGLI 259
+VL ACSH ++
Sbjct: 303 FTISSVLPACSHLEML 318
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P ++++WN +I+ +G +EA++++R M +KP+ T SV + V +G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 61 KEIH-----GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLP--VKDAISWNSI 113
I Y + D C+ +++ + R++++++L ++P A +W+S+
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 114 I-AGCVQNGL 122
+ A + N L
Sbjct: 694 LGASRIHNNL 703
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP L +WN +I GL + EE L++ R+M + PD +TL SV A V G
Sbjct: 136 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 195
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHGY I++GL+ ++ + SSL +MY + +++D + +PV++ ++WN++I G QN
Sbjct: 196 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 255
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + L ++ M I+ +P ++F +++ +C+ L G+Q+H I+ G + +
Sbjct: 256 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 315
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
SSL+ MY+KCG + A F + + D V W+++I HG +AI LF M E+ +
Sbjct: 316 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 375
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+ N VAF+ +L ACSH+GL DK F+ M + YG P +HY V DLLGRAG L +A
Sbjct: 376 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 435
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
I +M +W TLLSAC +HKN E+A +V ++I IDPN+ YV+L+N +A+A+
Sbjct: 436 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 495
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D + +R MR+K +KK SW E K + + F GD+S I LKEL M+
Sbjct: 496 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 555
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+GY PDT VLHD++EE+K++ L HSE+LA+ F ++ P+G IRIIKNLRVC DCH
Sbjct: 556 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 615
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K+IS I REI +RD SRFHHF +GKCSCGDYW
Sbjct: 616 AFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 149/305 (48%), Gaps = 12/305 (3%)
Query: 40 DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRL 98
D F + ++ +++ D ++G + + +N+ LIN Y + + ++ ++
Sbjct: 78 DKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNI-----LINGYVRAGDLVNARKV 132
Query: 99 FCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTL 158
F +P + +WN++IAG +Q +EGL FR+M P + S+ A L ++
Sbjct: 133 FDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSV 192
Query: 159 HLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGN 218
+G+Q+HG I+ G + ++ + SSL MY + G ++ + M + ++V+W +IMGN
Sbjct: 193 SIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN 252
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPS 278
A +G + L++ M+ G +PN + FV VL++CS + + K G +
Sbjct: 253 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSV 311
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH----KNVELAGKVA 334
+++ + + G L +A + S E +W +++SA H + +EL +A
Sbjct: 312 VAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 370
Query: 335 EKIFM 339
E+ M
Sbjct: 371 EQTNM 375
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 43/241 (17%)
Query: 112 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+ IA G E + FR + F+ + +C +L GKQLH ++ +
Sbjct: 18 TAIATLCSKGNLREAFQRFRLNIFTNTSL----FTPFIQSCTTRQSLPSGKQLHCLLVVS 73
Query: 172 GFDDNMFIASSLLDMYAKCG--------------------NIRL-----------ARCIF 200
GF + FI + L+ MY+K G NI + AR +F
Sbjct: 74 GFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVF 133
Query: 201 DKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
D+M + +W A+I G + +SLF +M G P+ +V + AGL
Sbjct: 134 DEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG--SAGLRS 191
Query: 261 KA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
+ + T YG+ +++A + R GKLQ+ I +M P N+ W TL
Sbjct: 192 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM---PVRNLVAWNTL 248
Query: 318 L 318
+
Sbjct: 249 I 249
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 310/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D VSW +I GLA+NGL +EA+ R+M LK D + SVLP + +GK+IH
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
IR ++ +GS+LI+MY KC + + +F + K+ +SW +++ G Q G +
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E +K F M + I P H + + ACA++++L G Q HG I +G + +++SL+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
+Y KCG+I + +F++M++ D VSWTA++ A G A + I LF++M + G+KP+ V
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V++ACS AGL++K YF MT +YGI PS HY+ + DL R+G+L+EA FI+
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P W TLLSACR N+E+ AE + +DP++ Y +LS+ YA+ +W
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
A LR MR K +KK P SWI+ K K ++F A D+S P+ +I L+EL ++ GY
Sbjct: 594 AQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
PDT V HDVEE K +L YHSERLAI FG+I P G IR+ KNLRVC DCH A K I
Sbjct: 654 PDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHI 713
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
S + REI+VRD RFH F+DG CSCGD+W
Sbjct: 714 SSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 179/356 (50%), Gaps = 43/356 (12%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
+P D V+WN +I G + +GL A+ M + + TL ++L + + V
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAK------------------------------- 88
GK+IHG I+ G ++ + +GS L+ MYA
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 89 CARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSI 148
C +ED+ +LF + KD++SW ++I G QNGL E ++ FR+M + +K F S+
Sbjct: 218 CGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 149 MPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDI 208
+PAC L ++ GKQ+H CIIR F D++++ S+L+DMY KC + A+ +FD+M ++
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 209 VSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNS 268
VSWTA+++G G A +A+ +F M++ G+ P+ ++AC++ +++ +
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 269 MTKDYGIAPSFEHYAAVAD----LLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
I HY V++ L G+ G + ++ + M+ + W ++SA
Sbjct: 397 -----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSA 446
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M ++VSW ++VG + G EEA+ I M + PD +TL + A+ + +G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ HG AI GL V + +SL+ +Y KC ++DS RLF + V+DA+SW ++++ Q
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E ++ F +M+ +KP V+ + ++ AC+ + G++ + G ++
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDL-HDIVSWTAVIMGNALHGN 223
S ++D++++ G + A + M D + WT ++ GN
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIA-KI 138
++L+ Y+K + + F LP +D ++WN +I G +GL +K + M+
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 139 KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARC 198
V+ +++ + + LGKQ+HG +I+ GF+ + + S LL MYA G I A+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGL 258
+F +D + V + +++ G G DA+ LF MEKD SV++ A++ + GL
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKD-----SVSWAAMIKGLAQNGL 250
Query: 259 IDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+A F M K G+ + +V G G + E +
Sbjct: 251 AKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K +HG IIR F+ ++++ YA + AR +FD++ ++ SW +++ +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 222 GNAHDAISLFEQM-EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
G + S FE++ ++DGV N ++ S +GL+ A +N+M +D+
Sbjct: 86 GLISEMESTFEKLPDRDGVTWN-----VLIEGYSLSGLVGAAVKAYNTMMRDF 133
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/512 (40%), Positives = 324/512 (63%), Gaps = 6/512 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPI-FADYVDV---IKGKEIH 64
WN + L G EE L + +M + ++ D FT + VL A V +KGKEIH
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ R G ++V I ++L++MYA+ V+ + +F +PV++ +SW+++IA +NG
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 125 EGLKFFRQML--IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E L+ FR+M+ P V+ S++ ACA L L GK +HG I+R G D + + S+
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ MY +CG + + + +FD+M D+VSW ++I +HG AI +FE+M +G P
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFI 302
V FV+VL ACSH GL+++ F +M +D+GI P EHYA + DLLGRA +L EA + +
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV 445
Query: 303 SNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWK 362
+M P VW +LL +CR+H NVELA + + ++F ++P N G YV+L++ YA A+ W
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWD 505
Query: 363 DAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEG 422
+ ++ + ++G++K P W+EV+ K Y+FV+ D+ +P +I+ L +L E M+++G
Sbjct: 506 EVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKG 565
Query: 423 YVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIK 482
Y+P TK VL+++E E+K+ ++ HSE+LA+ FG+I T G IRI KNLR+C DCH K
Sbjct: 566 YIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTK 625
Query: 483 FISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
FISK +++EI+VRD +RFH F++G CSCGDYW
Sbjct: 626 FISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 122/231 (52%), Gaps = 4/231 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MPV ++VSW+ +I A+NG EAL R+M + P+S T+ SVL A +
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+GK IHGY +R GLD+ + + S+L+ MY +C ++E R+F + +D +SWNS+I+
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNM 177
+G + ++ F +ML P V+F S++ AC+H + GK+L + R+ G +
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 178 FIASSLLDMYAKCGNI-RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDA 227
+ ++D+ + + A+ + D W +++ +HGN A
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 160/338 (47%), Gaps = 16/338 (4%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
+S N +I L + G ++A+ ++ Q + P T ++ + +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
+ +G D + + + LI MY+ V+ + ++F + WN++ G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPAC--AHLTTLHL--GKQLHGCIIRNGFDDNMFIASS 182
L + +M ++ +++ ++ AC + T HL GK++H + R G+ +++I ++
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVK 240
L+DMYA+ G + A +F M + ++VSW+A+I A +G A +A+ F +M E
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PNSV V+VL AC+ +++ + G+ +A+ + GR GKL+
Sbjct: 283 PNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIF 338
MH + W +L+S+ VH GK A +IF
Sbjct: 342 VFDRMHDRDVVS-WNSLISSYGVHG----YGKKAIQIF 374
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 327/541 (60%), Gaps = 33/541 (6%)
Query: 6 LVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHG 65
LV++N +I G G Y+EAL +VR+M + ++ D FT SV+ A + GK++H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 66 YAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV------- 118
Y +R D + +SL+++Y KC + +++ +F +P KD +SWN++++G V
Sbjct: 311 YVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 119 ------------------------QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAH 154
+NG +EGLK F M +P +FS + +CA
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 155 LTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
L G+Q H +++ GFD ++ ++L+ MYAKCG + AR +F M D VSW A+
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG 274
I HG+ +A+ ++E+M K G++P+ + + VLTACSHAGL+D+ YF+SM Y
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 275 IAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVA 334
I P +HYA + DLL R+GK +A I ++ PT +W LLS CRVH N+EL A
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 335 EKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAF 394
+K+F + P + G Y++LSN +AA +W++ A +R MR++G+KK ACSWIE++ + + F
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669
Query: 395 VAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEE-QKKNLLYYHSERLAIV 453
+ D SHP + L++L + M + GYVPDT VLHDVE + K+++L HSE++A+
Sbjct: 670 LVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVA 729
Query: 454 FGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDY 513
FG++ P GTTIRI KNLR CGDCH +F+S +VQR+II+RD RFHHF +G+CSCG++
Sbjct: 730 FGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNF 789
Query: 514 W 514
W
Sbjct: 790 W 790
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 181/420 (43%), Gaps = 73/420 (17%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG-K 61
+ D V +N +I G + N A+N+ +M + KPD+FT +SVL A D K
Sbjct: 110 MRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV 169
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCAR----VEDSHRLFCLLPVKDAISWNSIIAGC 117
+ H A++ G + ++L+++Y+KCA + + ++F + KD SW +++ G
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 118 VQNGLFD--------------------------------EGLKFFRQMLIAKIKPRHVSF 145
V+NG FD E L+ R+M+ + I+ ++
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
S++ ACA L LGKQ+H ++R D + +SL+ +Y KCG AR IF+KM
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 206 HDIVSWTAV-------------------------------IMGNALHGNAHDAISLFEQM 234
D+VSW A+ I G A +G + + LF M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 235 EKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGK 294
+++G +P AF + +C+ G Y + K G S A+ + + G
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGV 467
Query: 295 LQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFM--IDPNNMGAYVILS 352
++EA + M + + W L++A H + A V E++ I P+ + +L+
Sbjct: 468 VEEARQVFRTMPCLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 10/229 (4%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +++SW +I GLA NG EE L + M +P + S + A G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++ H ++ G D+++ G++LI MYAKC VE++ ++F +P D++SWN++IA Q+
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCI-----IRNGFDD 175
G E + + +ML I+P ++ +++ AC+H + G++ + I G D
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ L+D+ + G A + + + W A++ G +HGN
Sbjct: 557 ----YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 56/267 (20%)
Query: 156 TTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAK-------------------------- 189
T+L L + +HG II GF I + L+D+Y K
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 190 -----CGNIRLARCIFDKMD--LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
G+I LAR +F+K + D V + A+I G + + + + AI+LF +M+ +G KP+
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 243 SVAFVAVLTACS------------HAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
+ F +VL + HA + Y S++ + + A+ LL
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN--ALVSVYSKCASSPSLLH 205
Query: 291 RAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVI 350
A K+ + E + E W T+++ + +L ++ E M D + AY
Sbjct: 206 SARKVFD--EILEK-----DERSWTTMMTGYVKNGYFDLGEELLEG--MDDNMKLVAYNA 256
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMK 377
+ + Y +++A + M + G++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIE 283
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 50/284 (17%)
Query: 80 SSLINMYAKCARVEDSHRLFCLLPV--KDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+++++ Y + + +F PV +D + +N++I G N + F +M
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 138 IKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN---- 192
KP + +F+S++ A + Q H +++G ++++L+ +Y+KC +
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMG--------------------------NAL------ 220
+ AR +FD++ D SWT ++ G NA+
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 221 HGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID--KAWSYFNSMTKDYGIAPS 278
G +A+ + +M G++ + + +V+ AC+ AGL+ K + +D+ S
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF----S 319
Query: 279 FEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSA 320
F ++ L + GK EA M P +++ W LLS
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKM---PAKDLVSWNALLSG 360
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/519 (42%), Positives = 313/519 (60%), Gaps = 38/519 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+VSWN+++VG A+N +++AL + R+M +V + D+ T++S+LP
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP----------- 249
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
A+ + NV MY K +F + K +SWN +I ++N
Sbjct: 250 ------AVSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ E ++ + +M +P VS +S++PAC + L LGK++HG I R N+ +
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + AR +F+ M D+VSWTA+I G DA++LF +++ G+
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S+AFV L ACSHAGL+++ S F MT Y I P EH A + DLLGRAGK++EAY
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI +M P E VW LL ACRVH + ++ A+K+F + P G YV+LSN YA A R
Sbjct: 468 FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 527
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W++ ++R M++KG+KK P S +EV + F+ GD+SHP I L L+++M++
Sbjct: 528 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPD-----GTTIRIIKNLRVCG 475
GYVPD++ LHDVEEE K+ L HSE+LAIVF ++ T + TIRI KNLR+CG
Sbjct: 588 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICG 647
Query: 476 DCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
DCH A K IS+I REII+RD +RFH F G CSCGDYW
Sbjct: 648 DCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 42 FTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCL 101
F L VL Y D+ + +H I L N +G L+ YA V + ++F
Sbjct: 43 FLLGQVLDT---YPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 102 LPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG 161
+P ++ I N +I V NG + EG+K F M ++P H +F ++ AC+ T+ +G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+++HG + G +F+ + L+ MY KCG + AR + D+M D+VSW ++++G A +
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
DA+ + +ME + ++ ++L A S+
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
+ +H II N + L+ YA ++ AR +FD++ +++ +I +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEH 281
G + + +F M V+P+ F VL ACS +G I S TK G++ +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFV 177
Query: 282 YAAVADLLGRAGKLQEAYEFISNM 305
+ + G+ G L EA + M
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM 201
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 324/515 (62%), Gaps = 6/515 (1%)
Query: 6 LVSWNTVIVGLARN-GLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
++SW +I G +N L EA+N+ +M +++P+ FT SS + D GK++
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
G A + GL +N + +S+I+M+ K R+ED+ R F L K+ +S+N+ + G +N F
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 124 DEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSL 183
++ K ++ ++ +F+S++ A++ ++ G+Q+H +++ G N + ++L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 184 LDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNS 243
+ MY+KCG+I A +F+ M+ +++SWT++I G A HG A + F QM ++GVKPN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 244 VAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS 303
V +VA+L+ACSH GL+ + W +FNSM +D+ I P EHYA + DLL RAG L +A+EFI+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 304 NMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKD 363
M VW T L ACRVH N EL A KI +DPN AY+ LSN YA A +W++
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 364 AASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGY 423
+ +R M+ + + K CSWIEV +K + F GD +HP H+I + L L+ +++ GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 424 VPDTKEVLHDV----EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
VPDT VLH + +E +K+ LLY HSE++A+ FG+I T +R+ KNLRVCGDCH
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 815
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K+IS + REI++RD +RFHHF+DGKCSC DYW
Sbjct: 816 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 148/258 (57%), Gaps = 9/258 (3%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW+ ++ NG +A+ + + + L P+ + ++V+ ++ V G+
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 65 GYAIRHG-LDANVCIGSSLINMYAKCAR-VEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
G+ ++ G +++VC+G SLI+M+ K E+++++F + + ++W +I C+Q G
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
E ++FF M+++ + + SS+ ACA L L LGKQLH IR+G D+ + S
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECS 307
Query: 183 LLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGN-AHDAISLFEQMEKDG 238
L+DMYAKC G++ R +FD+M+ H ++SWTA+I G + N A +AI+LF +M G
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 239 -VKPNSVAFVAVLTACSH 255
V+PN F + AC +
Sbjct: 368 HVEPNHFTFSSAFKACGN 385
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
+LVS+NT + G RN +E+A ++ ++ L +FT +S+L A+ + KG++IH
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
++ GL N + ++LI+MY+KC ++ + R+F + ++ ISW S+I G ++G
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFIASSL 183
L+ F QM+ +KP V++ +I+ AC+H+ + G + + + M + +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 184 LDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAH-DAISLFEQMEKDGVKP 241
+D+ + G + A + M D++ W + +H N ++ + +E D +P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 242 NSVAFVAVLTACS 254
+ ++ + AC+
Sbjct: 678 AAYIQLSNIYACA 690
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 6/237 (2%)
Query: 25 ALNIVRQMGNVNLKP-DSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSLI 83
A++ + M ++P DS T SS+L D GK +H I ++ + + +SLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 84 NMYAKC---ARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKP 140
++Y+K A+ ED +D +SW++++A NG + +K F + L + P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 141 RHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMFIASSLLDMYAKCGN-IRLARC 198
+++++ AC++ + +G+ G +++ G F+ ++ + SL+DM+ K N A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 199 IFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
+FDKM ++V+WT +I G +AI F M G + + +V +AC+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 138 IKPR-HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
I+P V+FSS++ +C LGK +H +I + + + +SL+ +Y+K G+ A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 197 RCIFDKMDL---HDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+F+ M D+VSW+A++ +G DAI +F + + G+ PN + AV+ AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 254 SHAGLI 259
S++ +
Sbjct: 177 SNSDFV 182
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 222 GNAHDAISLFEQMEKDGVKP-NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFE 280
G+ A+S + M +DG++P +SV F ++L +C A + ++ ++ I P
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDF-RLGKLVHARLIEFDIEPDSV 98
Query: 281 HYAAVADLLGRAGKLQEAYEFISNMHA-GPTENVWLTLLSACRVHKNVEL 329
Y ++ L ++G +A + M G + V + + AC + EL
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/515 (43%), Positives = 325/515 (63%), Gaps = 9/515 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP D SWNT+I G AR G E+A + M ++ + + ++++ + + D+ K
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA 205
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPV-KDAISWNSIIAGCVQ 119
A G V +++I Y K +VE + +F + V K+ ++WN++I+G V+
Sbjct: 206 SHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVE 261
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N ++GLK FR ML I+P SS + C+ L+ L LG+Q+H + ++ +++
Sbjct: 262 NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA 321
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SL+ MY KCG + A +F+ M D+V+W A+I G A HGNA A+ LF +M + +
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI 381
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+P+ + FVAVL AC+HAGL++ +YF SM +DY + P +HY + DLLGRAGKL+EA
Sbjct: 382 RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEAL 441
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ I +M P V+ TLL ACRVHKNVELA AEK+ ++ N YV L+N YA+
Sbjct: 442 KLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKN 501
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW+D A +R M+ + K P SWIE++NK + F + D+ HP I++ LKEL ++M+
Sbjct: 502 RWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMK 561
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GY P+ + LH+VEEEQK+ LL +HSE+LA+ FG I P G+ I++ KNLR+CGDCH
Sbjct: 562 LAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHK 621
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
AIKFIS+I +REIIVRD +RFHHF+DG CSCGDYW
Sbjct: 622 AIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 105/250 (42%), Gaps = 11/250 (4%)
Query: 82 LINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPR 141
+++ Y + E + F +P KDA SWN++I G + G ++ + F M+ +
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM----EKN 185
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
VS+++++ L G + ++++ Y K + LA +F
Sbjct: 186 EVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFK 241
Query: 202 KMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
M ++ ++V+W A+I G + D + LF M ++G++PNS + L CS +
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 261 KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
++K + ++ + + G+L +A++ M W ++S
Sbjct: 302 LGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV-AWNAMISG 359
Query: 321 CRVHKNVELA 330
H N + A
Sbjct: 360 YAQHGNADKA 369
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 111 NSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR 170
N IIA CV++G D L+ F M + I + + H QL I
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAH---QLFDEIP- 120
Query: 171 NGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISL 230
+ + F + +L Y + N A+ FD+M D SW +I G A G A L
Sbjct: 121 ---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 231 FEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLG 290
F M ++ N V++ A+++ G ++KA +F +AP A A + G
Sbjct: 178 FYSM----MEKNEVSWNAMISGYIECGDLEKASHFFK-------VAPVRGVVAWTAMITG 226
Query: 291 --RAGKLQEAYEFISNMHAGPTENVWLTLLSA 320
+A K++ A +M W ++S
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 321/499 (64%), Gaps = 1/499 (0%)
Query: 16 LARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDAN 75
A+N L +L +++M NL+PD L S A G+ +H +++ G DA+
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 76 VCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLI 135
V +GSSL++MYAKC + + ++F +P ++ ++W+ ++ G Q G +E L F++ L
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 136 AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRL 195
+ SFSS++ CA+ T L LG+Q+HG I++ FD + F+ SSL+ +Y+KCG
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 196 ARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSH 255
A +F+++ + ++ W A++ A H + I LF++M+ G+KPN + F+ VL ACSH
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 256 AGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWL 315
AGL+D+ YF+ M K+ I P+ +HYA++ D+LGRAG+LQEA E I+NM PTE+VW
Sbjct: 331 AGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 316 TLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKG 375
LL++C VHKN ELA A+K+F + P + G ++ LSN YAA R++DAA R +R++G
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 376 MKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVE 435
KK SW+E +NK + F AG++ H I E L EL E ME+ GY+ DT VL +V+
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509
Query: 436 EEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVR 495
++K + YHSERLAI FG+I P IR++KNLRVCGDCH AIKF+S +R IIVR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569
Query: 496 DNSRFHHFEDGKCSCGDYW 514
DN+RFH FEDGKCSC DYW
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 148/274 (54%), Gaps = 6/274 (2%)
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
IKG ++HGY ++ GL + ++LIN Y+K DS R F P K + +W+SII+
Sbjct: 31 TIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISC 90
Query: 117 CVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN 176
QN L L+F ++M+ ++P S +CA L+ +G+ +H ++ G+D +
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 177 MFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEK 236
+F+ SSL+DMYAKCG I AR +FD+M ++V+W+ ++ G A G +A+ LF++
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 237 DGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQ 296
+ + N +F +V++ C+++ L++ + ++ S +++ L + G +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 297 EAYEFISNMHAGPTEN--VWLTLLSACRVHKNVE 328
AY+ + + P +N +W +L A H + +
Sbjct: 270 GAYQVFNEV---PVKNLGIWNAMLKAYAQHSHTQ 300
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 127/228 (55%), Gaps = 1/228 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++V+W+ ++ G A+ G EEAL + ++ NL + ++ SSV+ + A+ + G
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++IHG +I+ D++ +GSSL+++Y+KC E ++++F +PVK+ WN+++ Q+
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQH 296
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ ++ F++M ++ +KP ++F +++ AC+H + G+ + + +
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGNAHDA 227
+SL+DM + G ++ A + M + S W A++ +H N A
Sbjct: 357 ASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP ++VSW +I ++ G EAL + +M + KP+ FT ++VL + G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IHG ++ D+++ +GSSL++MYAK +++++ +F LP +D +S +IIAG Q
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL +E L+ F ++ + P +V+++S++ A + L L GKQ H ++R +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGV 239
+SL+DMY+KCGN+ AR +FD M +SW A+++G + HG + + LF M ++ V
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK-DYGIAPSFEHYAAVADLLGRAGKLQEA 298
KP++V +AVL+ CSH + D + F+ M +YG P EHY + D+LGRAG++ EA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
+EFI M + PT V +LL ACRVH +V++ V ++ I+P N G YVILSN YA+A
Sbjct: 413 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW D ++R M K + K P SWI+ + + F A D++HP + +KE+ +M
Sbjct: 473 GRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 532
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
+Q GYVPD VL+DV+EEQK+ +L HSE+LA+ FG+I T +G IR+ KNLR+C DCH
Sbjct: 533 KQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCH 592
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K SK+ +RE+ +RD +RFH DG CSCGDYW
Sbjct: 593 NFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 159/306 (51%), Gaps = 16/306 (5%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+S L S NG +EAL +M + + ++L D + G
Sbjct: 25 LPISQLCS----------NGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +H + I+ + + L+ Y KC +ED+ ++ +P K+ +SW ++I+ Q
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F +M+ + KP +F++++ +C + L LGKQ+HG I++ +D ++F+
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
SSLLDMYAK G I+ AR IF+ + D+VS TA+I G A G +A+ +F ++ +G+
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 241 PNSVAFVAVLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN V + ++LTA S L+D ++ + + ++ ++ ++ D+ + G L A
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAR 309
Query: 300 EFISNM 305
NM
Sbjct: 310 RLFDNM 315
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/508 (40%), Positives = 316/508 (62%), Gaps = 1/508 (0%)
Query: 8 SWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYA 67
SWN +I G A++ +L+ QM L PDSFT+ S+L + + GKE+HG+
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 68 IRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL 127
IR+ L+ ++ + S++++Y C + LF + K +SWN++I G +QNG D L
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 128 KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FRQM++ I+ +S + AC+ L +L LG++ H +++ +D+ FIA SL+DMY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
AK G+I + +F+ + SW A+IMG +HG A +AI LFE+M++ G P+ + F+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 248 AVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFIS-NMH 306
VLTAC+H+GLI + Y + M +G+ P+ +HYA V D+LGRAG+L +A ++ M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
+W +LLS+CR+H+N+E+ KVA K+F ++P YV+LSN YA +W+D
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R M ++K CSWIE+ K ++FV G++ + I L ++ + GY PD
Sbjct: 823 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPD 882
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HD+ EE+K L HSE+LA+ +G+I T +GTTIR+ KNLR+C DCH A K ISK
Sbjct: 883 TMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISK 942
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+++REI+VRDN RFHHF++G CSCGDYW
Sbjct: 943 VMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 5 DLVSWNTVIVGLARNGLYEEAL-NIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
+L WN VI +RN LY+E L + + +L PD FT V+ A DV G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 64 HGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLF 123
HG ++ GL +V +G++L++ Y V D+ +LF ++P ++ +SWNS+I NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 124 DEGLKFFRQMLI----AKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
+E +M+ P + +++P CA + LGK +HG ++ D + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG- 238
++L+DMY+KCG I A+ IF + ++VSW ++ G + G+ H + QM G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 239 -VKPNSVAFVAVLTACSHAGLI 259
VK + V + + C H +
Sbjct: 390 DVKADEVTILNAVPVCFHESFL 411
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 142/260 (54%), Gaps = 6/260 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM----GNVNLKPDSFTLSSVLPIFADYVD 56
MP +LVSWN++I + NG EE+ ++ +M G+ PD TL +VLP+ A +
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 57 VIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAG 116
+ GK +HG+A++ LD + + ++L++MY+KC + ++ +F + K+ +SWN+++ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 117 CVQNGLFDEGLKFFRQMLIA--KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD 174
G RQML +K V+ + +P C H + L K+LH ++ F
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 175 DNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM 234
N +A++ + YAKCG++ A+ +F + + SW A+I G+A + ++ QM
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 235 EKDGVKPNSVAFVAVLTACS 254
+ G+ P+S ++L+ACS
Sbjct: 488 KISGLLPDSFTVCSLLSACS 507
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M LVSWNTVI G +NG + AL + RQM ++ ++ V + + G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+E H YA++H L+ + I SLI+MYAK + S ++F L K SWN++I G +
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLG-KQLHGCIIRNGFDDNMFI 179
GL E +K F +M P ++F ++ AC H +H G + L G N+
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 180 ASSLLDMYAKCGNIRLA-RCIFDKM-DLHDIVSWTAVIMGNALHGN 223
+ ++DM + G + A R + ++M + D+ W +++ +H N
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 782
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 112/207 (54%), Gaps = 10/207 (4%)
Query: 56 DVIKGKEIHGY---AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNS 112
D+ G++IH + R D +C + +I MYA C +DS +F L K+ WN+
Sbjct: 99 DIEMGRKIHQLVSGSTRLRNDDVLC--TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 156
Query: 113 IIAGCVQNGLFDEGLKFFRQML-IAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 171
+I+ +N L+DE L+ F +M+ + P H ++ ++ ACA ++ + +G +HG +++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 172 GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 231
G +++F+ ++L+ Y G + A +FD M ++VSW ++I + +G + ++ L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 232 -EQMEKDG---VKPNSVAFVAVLTACS 254
E ME++G P+ V VL C+
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCA 303
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/520 (42%), Positives = 326/520 (62%), Gaps = 8/520 (1%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
+ D VSWN++IV ++ +AL + ++M K D FTL+SVL +I G++
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVE---DSHRLFCLLPVKDAISWNSIIAGCVQ 119
HG I+ G N +GS LI+ Y+KC + DS ++F + D + WN++I+G
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 120 NG-LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDN-M 177
N L +E +K FRQM +P SF + AC++L++ KQ+HG I++ N +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ ++L+ +Y K GN++ AR +FD+M + VS+ +I G A HG+ +A+ L+++M
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ PN + FVAVL+AC+H G +D+ YFN+M + + I P EHY+ + DLLGRAGKL+E
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 298 AYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAA 357
A FI M P W LL ACR HKN+ LA + A ++ ++ P YV+L+N YA
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYAD 561
Query: 358 ARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLER 417
AR+W++ AS+R MR K ++K P CSWIEVK K + FVA D SHP +NE L+E++++
Sbjct: 562 ARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKK 621
Query: 418 MEQEGYVPDTKEVLHDVEEEQKKNL---LYYHSERLAIVFGIICTPDGTTIRIIKNLRVC 474
M++ GYV D K + +E + + L +HSE+LA+ FG++ T DG + ++KNLR+C
Sbjct: 622 MKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRIC 681
Query: 475 GDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
GDCH AIKF+S + REIIVRDN RFH F+DGKCSCGDYW
Sbjct: 682 GDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARV----------------------- 92
D+ GK +H ++ + ++ + + +N+Y+KC R+
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 93 ---EDS-----HRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVS 144
+DS +LF +P D +S+N++I+G + F++M + +
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 145 FSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMD 204
S ++ AC + L KQLH + GFD + ++ + Y+K G +R A +F MD
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 205 -LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
L D VSW ++I+ H A++L+++M G K + +VL A +
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 174 DDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQ 233
+ N+F + ++ YAK I +AR +FD++ D VS+ +I G A A+ LF++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 234 MEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLL---- 289
M K G + + ++ AC + K F+ ++ F+ Y++V +
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFS-------VSGGFDSYSSVNNAFVTYY 183
Query: 290 GRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHK 325
+ G L+EA M E W +++ A HK
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP + VS+N +I G A++G EAL + ++M + + P+ T +VL A V +G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 61 KE-IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGC 117
+E + ++ S +I++ + ++E++ R +P K +++W +++ C
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 319/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D VSWN++I G ++G EA+ + + M + + D T ++ + D+ G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H I+ G+ ++ + ++LI+MYAKC V DS ++F + D ++WN++I+ CV+
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G F GL+ QM +++ P +F +P CA L LGK++H C++R G++ + I
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L++MY+KCG + + +F++M D+V+WT +I ++G A+ F MEK G+
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+SV F+A++ ACSH+GL+D+ + F M Y I P EHYA V DLL R+ K+ +A E
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI M P ++W ++L ACR ++E A +V+ +I ++P++ G ++ SN YAA R+
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 727
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + +R +++K + K P SWIEV + F +GD S P I ++L+ L M +
Sbjct: 728 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAK 787
Query: 421 EGYVPDTKEVLHDV-EEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
EGY+PD +EV ++ EEE+K+ L+ HSERLAI FG++ T GT ++++KNLRVCGDCH
Sbjct: 788 EGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHE 847
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
K ISKIV REI+VRD +RFH F+DG CSC D W
Sbjct: 848 VTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 190/321 (59%), Gaps = 3/321 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV DLVSWN++I G + +G YEEAL I ++ N + PDSFT+SSVLP F + + V +G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ +HG+A++ G+++ V + + L+ MY K R D+ R+F + V+D++S+N++I G ++
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+ +E ++ F + L + KP ++ SS++ AC HL L L K ++ +++ GF +
Sbjct: 287 EMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D+YAKCG++ AR +F+ M+ D VSW ++I G G+ +A+ LF+ M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
+ + ++ +++ + + ++ K GI A+ D+ + G++ ++ +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 301 FISNMHAGPTENVWLTLLSAC 321
S+M G T W T++SAC
Sbjct: 465 IFSSMGTGDTVT-WNTVISAC 484
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 135/254 (53%), Gaps = 1/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V D VS+NT+I G + + EE++ + + + KPD T+SSVL D+
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I+ Y ++ G + + LI++YAKC + + +F + KD +SWNSII+G +Q+
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E +K F+ M+I + + H+++ ++ L L GK LH I++G ++ ++
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + + IF M D V+W VI G+ + + QM K V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 241 PNSVAFVAVLTACS 254
P+ F+ L C+
Sbjct: 507 PDMATFLVTLPMCA 520
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 3/319 (0%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++ WN++I ++NGL+ EAL ++ + PD +T SV+ A D G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++ + G ++++ +G++L++MY++ + + ++F +PV+D +SWNS+I+G +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++E L+ + ++ + I P + SS++PA +L + G+ LHG +++G + + + +
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+ MY K AR +FD+MD+ D VS+ +I G +++ +F + D KP
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ + +VL AC H + A +N M K G + D+ + G + A +
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 302 ISNMHAGPTENVWLTLLSA 320
++M T + W +++S
Sbjct: 365 FNSMECKDTVS-WNSIISG 382
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL-PVKDAISWNSIIAGCVQ 119
+ IH I GLD++ LI+ Y+ S +F + P K+ WNSII +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
NGLF E L+F+ ++ +K+ P +F S++ ACA L +G ++ I+ GF+ ++F+
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++L+DMY++ G + AR +FD+M + D+VSW ++I G + HG +A+ ++ +++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 240 KPNSVAFVAVLTA 252
P+S +VL A
Sbjct: 204 VPDSFTVSSVLPA 216
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 142 HVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFD 201
VS I A + + L+ +++H +I G D + F + L+D Y+ + +F
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 202 KMD-LHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
++ ++ W ++I + +G +A+ + ++ + V P+ F +V+ AC AGL D
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFD 121
Query: 261 -KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV--WLTL 317
+ D G A+ D+ R G L A + M P ++ W +L
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM---PVRDLVSWNSL 178
Query: 318 LSACRVHKNVELAGKV 333
+S H E A ++
Sbjct: 179 ISGYSSHGYYEEALEI 194
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 307/510 (60%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSW T+I G + ++AL RQM + ++ D L++ + A + +G++IH
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
A G +++ ++L+ +Y++C ++E+S+ F D I+WN++++G Q+G +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E L+ F +M I + +F S + A + + GKQ+H I + G+D + ++L+
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 734
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
MYAKCG+I A F ++ + VSW A+I + HG +A+ F+QM V+PN V
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 794
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
V VL+ACSH GL+DK +YF SM +YG++P EHY V D+L RAG L A EFI
Sbjct: 795 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 854
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M P VW TLLSAC VHKN+E+ A + ++P + YV+LSN YA +++W
Sbjct: 855 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDAR 914
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYV 424
R M+ KG+KK P SWIEVKN ++F GD++HP I+E ++L +R + GYV
Sbjct: 915 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 974
Query: 425 PDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D +L++++ EQK +++ HSE+LAI FG++ P I ++KNLRVC DCH IKF+
Sbjct: 975 QDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFV 1034
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SK+ REIIVRD RFHHFE G CSC DYW
Sbjct: 1035 SKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 160/305 (52%), Gaps = 6/305 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIF---ADYVDV 57
MP + +WN +I LA L E + +M + N+ P+ T S VL + DV
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
++ +IH + GL + + + LI++Y++ V+ + R+F L +KD SW ++I+G
Sbjct: 206 VE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
+N E ++ F M + I P +FSS++ AC + +L +G+QLHG +++ GF +
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
++ ++L+ +Y GN+ A IF M D V++ +I G + G A+ LF++M D
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G++P+S +++ ACS G + + ++ T G A + + A+ +L + ++
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 298 AYEFI 302
A ++
Sbjct: 443 ALDYF 447
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 3 VSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKE 62
V ++V WN ++V + I RQM + P+ +T S+L D+ G++
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
IH I+ N + S LI+MYAK +++ + + KD +SW ++IAG Q
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
D+ L FRQML I+ V ++ + ACA L L G+Q+H +GF ++ ++
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+ +Y++CG I + F++ + D ++W A++ G GN +A+ +F +M ++G+ N
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ F + + A S + + +TK G E A+ + + G + +A
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA 746
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 164/324 (50%), Gaps = 10/324 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+ + D SW +I GL++N EA+ + M + + P + SSVL + G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ G ++ + ++L+++Y + + +F + +DA+++N++I G Q
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G ++ ++ F++M + ++P + +S++ AC+ TL G+QLH + GF N I
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+LL++YAKC +I A F + ++ ++V W +++ L + ++ +F QM+ + +
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA----DLLGRAGKLQ 296
PN + ++L C G ++ + + K +F+ A V D+ + GKL
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIK-----TNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 297 EAYEFISNMHAGPTENVWLTLLSA 320
A++ + AG W T+++
Sbjct: 543 TAWDILIRF-AGKDVVSWTTMIAG 565
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 5/296 (1%)
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+++H ++ GLD+N C+ L + Y + + ++F +P + +WN +I
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPAC-AHLTTLHLGKQLHGCIIRNGFDDNM 177
L E F +M+ + P +FS ++ AC + +Q+H I+ G D+
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ + L+D+Y++ G + LAR +FD + L D SW A+I G + + +AI LF M
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 238 GVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQE 297
G+ P AF +VL+AC ++ + + G + A+ L G L
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 298 AYEFISNMHA--GPTENVWLTLLSACRV-HKNVELAGKVAEKIFMIDPNNMGAYVI 350
A SNM T N + LS C K +EL ++ D N + + V+
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 138 IKPRHVSFSSIMPACAHLT-TLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLA 196
I+P H + ++ C +L G++LH I++ G D N ++ L D Y G++ A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 197 RCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
+FD+M I +W +I A + LF +M + V PN F VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 326/545 (59%), Gaps = 36/545 (6%)
Query: 4 SDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEI 63
S+L N + R GL EAL + M + ++PD ++ S + + +++ GK
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 64 HGYAIRHGLDA--NVCIGSSLINMYAKCARVEDSHRLFC--------------------- 100
HGY +R+G ++ N+C ++LI+MY KC R + + R+F
Sbjct: 360 HGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 101 ----------LLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIM 149
+P K+ +SWN+II+G VQ LF+E ++ F M + + V+ SI
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 150 PACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIV 209
AC HL L L K ++ I +NG ++ + ++L+DM+++CG+ A IF+ + D+
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 210 SWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSM 269
+WTA I A+ GNA AI LF+ M + G+KP+ VAFV LTACSH GL+ + F SM
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 270 TKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVEL 329
K +G++P HY + DLLGRAG L+EA + I +M P + +W +LL+ACRV NVE+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 330 AGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKN 389
A AEKI ++ P G+YV+LSN YA+A RW D A +R+ M+ KG++K P S I+++
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 390 KAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSER 449
K + F +GD+SHP I L E+ +R G+VPD VL DV+E++K +L HSE+
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEK 777
Query: 450 LAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCS 509
LA+ +G+I + GTTIRI+KNLRVC DCH+ KF SK+ REII+RDN+RFH+ GKCS
Sbjct: 778 LAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCS 837
Query: 510 CGDYW 514
CGD+W
Sbjct: 838 CGDFW 842
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 132/248 (53%), Gaps = 1/248 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I G A +GL EA+ + +M N + PD +T L A G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G ++ + +SL++ YA+C ++ + ++F + ++ +SW S+I G + + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 129 -FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMY 187
FFR + ++ P V+ ++ ACA L L G++++ I +G + N + S+L+DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 188 AKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFV 247
KC I +A+ +FD+ ++ A+ G +A+ +F M GV+P+ ++ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 248 AVLTACSH 255
+ +++CS
Sbjct: 342 SAISSCSQ 349
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 3/238 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIK 59
MP ++VSWNT+I GL + L+EEA+ + M + D T+ S+ +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K I+ Y ++G+ +V +G++L++M+++C E + +F L +D +W + I
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIR-NGFDDNMF 178
G + ++ F M+ +KP V+F + AC+H + GK++ +++ +G
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQME 235
++D+ + G + A + + M + + V W +++ + GN A E+++
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 328/543 (60%), Gaps = 33/543 (6%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+VSWN++I G + G ++AL + ++M + ++K T+ VL A ++ G+++
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLL---------------------- 102
Y + ++ N+ + +++++MY KC +ED+ RLF +
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 103 ---------PVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK-IKPRHVSFSSIMPAC 152
P KD ++WN++I+ QNG +E L F ++ + K +K ++ S + AC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 153 AHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWT 212
A + L LG+ +H I ++G N + S+L+ MY+KCG++ +R +F+ ++ D+ W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 213 AVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
A+I G A+HG ++A+ +F +M++ VKPN V F V ACSH GL+D+A S F+ M +
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 273 YGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGK 332
YGI P +HYA + D+LGR+G L++A +FI M P+ +VW LL AC++H N+ LA
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 333 VAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAY 392
++ ++P N GA+V+LSN YA +W++ + LR MR G+KK P CS IE+ +
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 393 AFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHDVEEEQ-KKNLLYYHSERLA 451
F++GD +HP ++ L E++E+++ GY P+ +VL +EEE+ K+ L HSE+LA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 452 IVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCG 511
I +G+I T IR+IKNLRVCGDCH+ K IS++ REIIVRD RFHHF +G+CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 512 DYW 514
D+W
Sbjct: 736 DFW 738
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 180/359 (50%), Gaps = 39/359 (10%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNI---VRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
+P + +WNT+I A + L+I + + P+ +T ++ A+ +
Sbjct: 90 IPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
G+ +HG A++ + ++V + +SLI+ Y C ++ + ++F + KD +SWNS+I G
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
VQ G D+ L+ F++M +K HV+ ++ ACA + L G+Q+ I N + N+
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNAL----------------- 220
+A+++LDMY KCG+I A+ +FD M+ D V+WT ++ G A+
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 221 --------------HGNAHDAISLFEQME-KDGVKPNSVAFVAVLTACSHAGLIDKAWSY 265
+G ++A+ +F +++ + +K N + V+ L+AC+ G ++ +
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RW 386
Query: 266 FNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVH 324
+S K +GI +F +A+ + + G L+++ E +++ VW ++ +H
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV-FVWSAMIGGLAMH 444
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMG-NVNLKPDSFTLSSVLPIFADYVDVIK 59
MP D+V+WN +I +NG EAL + ++ N+K + TL S L A +
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
G+ IH Y +HG+ N + S+LI+MY+KC +E S +F + +D W+++I G
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMF 178
+G +E + F +M A +KP V+F+++ AC+H + + L + N G
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVS-WTAVIMGNALHGN 223
+ ++D+ + G + A + M + S W A++ +H N
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 103/290 (35%), Gaps = 61/290 (21%)
Query: 140 PRHVSFS---------------SIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
PRH +FS S++ C L L KQ HG +IR G + + AS L
Sbjct: 13 PRHPNFSNPNQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLF 69
Query: 185 DMYA--KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQM-EKDGVKP 241
M A ++ AR +FD++ + +W +I A + +I F M + P
Sbjct: 70 AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 129
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTK-----DYGIAPSFEH-YAAVADL------- 288
N F ++ A + + S K D +A S H Y + DL
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 289 -----------------LGRAGKLQEAYEFISNMHAGPTENVWLTL---LSACRVHKNVE 328
+ G +A E M + + +T+ LSAC +N+E
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 329 LAGKVAEKIFMIDPNNMGAYVILSNT----YAAARRWKDAASLRVFMRNK 374
+V I+ N + + L+N Y +DA L M K
Sbjct: 250 FGRQVCS---YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 308/514 (59%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +V+W + G +G + EA+++ ++M + +KPDS+ + VL D+ G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+ I Y + N + ++L+N+YAKC ++E + +F + KD ++W+++I G N
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
EG++ F QML +KP S + +CA L L LG+ I R+ F N+F+A
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DMYAKCG + +F +M DIV A I G A +G+ + ++F Q EK G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ F+ +L C HAGLI +FN+++ Y + + EHY + DL GRAG L +AY
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I +M P VW LLS CR+ K+ +LA V +++ ++P N G YV LSN Y+ R
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W +AA +R M KGMKK P SWIE++ K + F+A DKSHP +I L++L M
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTA 480
G+VP T+ V DVEEE+K+ +L YHSE+LA+ G+I T G IR++KNLRVCGDCH
Sbjct: 592 MGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEV 651
Query: 481 IKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+K ISKI +REI+VRDN+RFH F +G CSC DYW
Sbjct: 652 MKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
+N++I G N L+ E L++ + L FT VL G ++H +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
+ G + +V +SL+++Y+ R+ D+H+LF +P + ++W ++ +G +G E +
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
F++M+ +KP ++ AC H+ L G+ + + N F+ ++L+++YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCG + AR +FD M DIV+W+ +I G A + + I LF QM ++ +KP+ + V
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 249 VLTACSHAGLIDKA-WSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
L++C+ G +D W S+ + + A+ D+ + G + +E M
Sbjct: 319 FLSSCASLGALDLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K+IH I H L + + + L+ + + S+ LF + +NS+I G V N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
LF E L F + + +F ++ AC ++ LG LH +++ GF+ ++
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SLL +Y+ G + A +FD++ +V+WTA+ G G +AI LF++M + GVK
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+S V VL+AC H G +D M + SF + +L + GK+++A
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKMEKARS 268
Query: 301 FISNM 305
+M
Sbjct: 269 VFDSM 273
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 325/562 (57%), Gaps = 48/562 (8%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIV---RQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + SWNT+I G + + + + I M + ++P+ FT SVL A +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVED----------------------- 94
+GK+IHG A+++G + + S+L+ MY C ++D
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 95 ----------------------SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQ 132
+ LF + + +SWN++I+G NG F + ++ FR+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 133 MLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGN 192
M I+P +V+ S++PA + L +L LG+ LH +G + + S+L+DMY+KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 193 IRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
I A +F+++ ++++W+A+I G A+HG A DAI F +M + GV+P+ VA++ +LTA
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 253 CSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTEN 312
CSH GL+++ YF+ M G+ P EHY + DLLGR+G L EA EFI NM P +
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 313 VWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMR 372
+W LL ACR+ NVE+ +VA + + P++ GAYV LSN YA+ W + + +R+ M+
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 373 NKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLH 432
K ++K P CS I++ + FV D SHP IN L E+ +++ GY P T +VL
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLL 564
Query: 433 DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREI 492
++EEE K+N+L+YHSE++A FG+I T G IRI+KNLR+C DCH++IK ISK+ +R+I
Sbjct: 565 NLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624
Query: 493 IVRDNSRFHHFEDGKCSCGDYW 514
VRD RFHHF+DG CSC DYW
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 56/281 (19%)
Query: 95 SHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGL----KFFRQMLIAKIKPRHVSFSSIMP 150
+H++F +P ++ SWN+II G ++ D+ L F+ M ++P +F S++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136
Query: 151 ACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKC-------------------- 190
ACA + GKQ+HG ++ GF + F+ S+L+ MY C
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 191 -------------------------GNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAH 225
G+ + AR +FDKM +VSW +I G +L+G
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 226 DAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAV 285
DA+ +F +M+K ++PN V V+VL A S G ++ + + +D GI +A+
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSAL 315
Query: 286 ADLLGRAGKLQEAYEFISNMHAGPTENV--WLTLLSACRVH 324
D+ + G +++A + P ENV W +++ +H
Sbjct: 316 IDMYSKCGIIEKAIHVFERL---PRENVITWSAMINGFAIH 353
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/515 (39%), Positives = 325/515 (63%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M D+V +N++ G +R E ++ ++ + PD++T S+L A + +G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++H +++ GLD NV + +LINMY +C V+ + +F + + +N++I G +
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
+E L FR+M +KP ++ S++ +CA L +L LGK +H ++ F + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
++L+DM+AKCG++ A IF+KM D +W+A+I+ A HG A ++ +FE+M + V+
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
P+ + F+ +L ACSH G +++ YF+ M +GI PS +HY ++ DLL RAG L++AYE
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
FI + PT +W LL+AC H N++LA KV+E+IF +D ++ G YVILSN YA ++
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W+ SLR M+++ K P CS IEV N + F +GD +++ AL E+++ ++
Sbjct: 449 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
Query: 421 EGYVPDTKEVLH-DVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
GYVPDT V+H ++ +++K+ L YHSE+LAI FG++ TP GTTIR++KNLRVC DCH
Sbjct: 509 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 568
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A K IS I R++++RD RFHHFEDGKCSCGD+W
Sbjct: 569 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 66/307 (21%)
Query: 163 QLHGCIIRNGFDDNMFIASSLLDMYAKC---GNIRLARCIFDKMDLHDIVSWTAVIMGNA 219
Q+ I++ +D F+A L++ + ++ AR +F+ M DIV + ++ G +
Sbjct: 47 QIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 220 LHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA----------------GLIDKAW 263
N + SLF ++ +DG+ P++ F ++L AC+ A GL D +
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 264 ---SYFNSMTK-----------DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHA-- 307
+ N T+ D + P Y A+ R + EA M
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 308 -GPTENVWLTLLSACRVHKNVELAG---KVAEKIFMIDPNNMGAYV----ILSNTYAAAR 359
P E L++LS+C + +++L K A+K ++ YV L + +A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK------HSFCKYVKVNTALIDMFAKCG 279
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
DA S+ MR K T A S + V AYA H E + ERM
Sbjct: 280 SLDDAVSIFEKMR---YKDTQAWSAMIV---AYA----------NHGKAEKSMLMFERMR 323
Query: 420 QEGYVPD 426
E PD
Sbjct: 324 SENVQPD 330
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 317/515 (61%), Gaps = 1/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +D+V W+ +I +NG EA+++ +M + P+ FTLSS+L A G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+++HG ++ G D ++ + ++LI++YAKC +++ + +LF L K+ +SWN++I G
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G + FR+ L ++ V+FSS + ACA L ++ LG Q+HG I+ + ++
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+DMYAKCG+I+ A+ +F++M+ D+ SW A+I G + HG A+ + + M+ K
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYE 300
PN + F+ VL+ CS+AGLID+ F SM +D+GI P EHY + LLGR+G+L +A +
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 301 FISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARR 360
I + P+ +W +LSA N E A + AE+I I+P + YV++SN YA A++
Sbjct: 608 LIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQ 667
Query: 361 WKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQ 420
W + AS+R M+ G+KK P SWIE + + F G HP IN L+ L + +
Sbjct: 668 WANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATR 727
Query: 421 EGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDG-TTIRIIKNLRVCGDCHT 479
GYVPD VL D+++E+K L+ HSERLA+ +G++ P I I+KNLR+C DCH+
Sbjct: 728 AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHS 787
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
A+K IS IVQR++++RD +RFHHF G CSCGD+W
Sbjct: 788 AMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 28/387 (7%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVL--PIFADYVDVIKGKE 62
D+V W ++ NG +E++L ++ M P+++T + L I D KG
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG-- 268
Query: 63 IHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGL 122
+HG ++ + +G L+ +Y + + D+ ++F +P D + W+ +IA QNG
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 123 FDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASS 182
+E + F +M A + P + SSI+ CA LG+QLHG +++ GFD +++++++
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 183 LLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPN 242
L+D+YAKC + A +F ++ + VSW VI+G G A S+F + ++ V
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 243 SVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVA------DLLGRAGKLQ 296
V F + L AC+ +D + +G+A + VA D+ + G ++
Sbjct: 449 EVTFSSALGACASLASMDLG-------VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 297 EAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMI------DPNNMGAYVI 350
A + M + W L+S H G+ A +I I PN + +
Sbjct: 502 FAQSVFNEMETIDVAS-WNALISGYSTHG----LGRQALRILDIMKDRDCKPNGLTFLGV 556
Query: 351 LSNTYAAARRWKDAASLRVFMRNKGMK 377
LS A + +R+ G++
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIE 583
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 1 MPVSDLVSWNTVIVGLARN---GLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDV 57
MP + VS+ T+ G A GLY + + G+ L P FT S L +F
Sbjct: 110 MPERNNVSFVTLAQGYACQDPIGLYSR----LHREGH-ELNPHVFT--SFLKLFVSLDKA 162
Query: 58 IKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGC 117
+H ++ G D+N +G++LIN Y+ C V+ + +F + KD + W I++
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 118 VQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNM 177
V+NG F++ LK M +A P + +F + + A L K +HG I++ + +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 178 FIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD 237
+ LL +Y + G++ A +F++M +D+V W+ +I +G ++A+ LF +M +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 238 GVKPNSVAFVAVLTACS 254
V PN ++L C+
Sbjct: 343 FVVPNEFTLSSILNGCA 359
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 56 DVIKGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 115
D I K IH ++ G ++ + L+N Y K +D+ LF +P ++ +S+ ++
Sbjct: 64 DPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQ 123
Query: 116 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 175
G + R+ ++ P HV F+S + L + LH I++ G+D
Sbjct: 124 GYACQDPIGLYSRLHREG--HELNP-HV-FTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 176 NMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQME 235
N F+ ++L++ Y+ CG++ AR +F+ + DIV W ++ +G D++ L M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 236 KDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD-YGIAPSFEHYAAVADLLGRAGK 294
G PN+ F L A G D A + K Y + P + L + G
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGD 297
Query: 295 LQEAYEFISNM 305
+ +A++ + M
Sbjct: 298 MSDAFKVFNEM 308
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 144 SFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKM 203
++ +++ C K +H I++ G ++F + LL+ Y K G + A +FD+M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 204 DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVL 250
+ VS+ + G A D I L+ ++ ++G + N F + L
Sbjct: 111 PERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFL 153
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 309/515 (60%), Gaps = 3/515 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +++SW T+I GL +N EAL++ + M +K S + V+ A+ G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG I+ G + +SLI YA C R+ DS ++F + W ++++G N
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ L F ML I P +F+S + +C+ L TL GK++HG ++ G + + F+
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+SL+ MY+ GN+ A +F K+ IVSW ++I+G A HG A +F QM + +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 241 PNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYG-IAPSFEHYAAVADLLGRAGKLQEAY 299
P+ + F +L+ACSH G ++K F M+ I +HY + D+LGR GKL+EA
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
E I M P E VWL LLSACR+H +V+ K A IF +D + AYV+LSN YA+A
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544
Query: 360 RWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME 419
RW + + LRV M+ G+ K P SW+ ++ K + F +GD+ H RI E L+ L E+++
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC--SRIYEKLEFLREKLK 602
Query: 420 QEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHT 479
+ GY PD + LHDVE+EQK+ +L+YHSERLAI FG+I T +G+ + ++KNLRVC DCHT
Sbjct: 603 ELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHT 662
Query: 480 AIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
IK IS +V REI++RD RFHHF++G CSCGDYW
Sbjct: 663 VIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 10/261 (3%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV D+VSWN++I G G A+ + +M P+ +S + + G
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRS---G 142
Query: 61 KEIHGYAIRHGLDA-NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K + + + + +S+++ Y + +V+D+ +LF +P K+ ISW ++I G Q
Sbjct: 143 KVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
N E L F+ ML IK F+ ++ ACA+ H+G Q+HG II+ GF ++
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYV 262
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
++SL+ YA C I +R +FD+ + WTA++ G +L+ DA+S+F M ++ +
Sbjct: 263 SASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Query: 240 KPNSVAFVAVLTACSHAGLID 260
PN F + L +CS G +D
Sbjct: 323 LPNQSTFASGLNSCSALGTLD 343
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 75 NVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQML 134
+V + + +I Y + R+ D+ LF +PV+D +SWNS+I+GCV+ G + +K F +M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 135 IAKIKPRHVSFSSIMPACAHLTTLHLGKQL-HGCIIRNGFDDNMFIASSLLDMYAKCGNI 193
+ VS+++++ C + ++L + +++ N S++ Y + G +
Sbjct: 125 ERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQFGKV 175
Query: 194 RLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTAC 253
A +F +M +++SWT +I G + + +A+ LF+ M + +K S F V+TAC
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 254 SHA 256
++A
Sbjct: 236 ANA 238
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/518 (38%), Positives = 322/518 (62%), Gaps = 5/518 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P+ D +N+VI ++ L + R+M + N+ P ++T +SV+ AD + G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K +H +A+ G + + ++L+ Y+KC +E + ++F +P K ++WNS+++G QN
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
GL DE ++ F QM + +P +F S++ ACA + LG +H II G D N+ +
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKD-GV 239
++L+++Y++CG++ AR +FDKM ++ +WTA+I HG A+ LF +ME D G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
PN+V FVAVL+AC+HAGL+++ S + MTK Y + P EH+ + D+LGRAG L EAY
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 300 EFISNMHA---GPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYA 356
+FI + A +W +L AC++H+N +L ++A+++ ++P+N G +V+LSN YA
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
Query: 357 AARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLE 416
+ + + + +R M ++K S IEV+NK Y F GD+SH I L+ L+
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486
Query: 417 RMEQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGD 476
R ++ GY P ++EV+H VEEE+K+ L YHSE+LA+ FG++ T D I I+KNLR+C D
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICED 545
Query: 477 CHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
CH+A K+IS + R+I VRD RFHHF++G CSC DYW
Sbjct: 546 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 316/511 (61%), Gaps = 2/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
DL+SW TVI G A+N + EAL + R + ++ D L S+L + ++ KEIH
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ +R GL + I + L+++Y KC + + R+F + KD +SW S+I+ NG
Sbjct: 511 CHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
E ++ FR+M+ + V+ I+ A A L+ L+ G+++H ++R GF IA +++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
DMYA CG+++ A+ +FD+++ ++ +T++I +HG A+ LF++M + V P+ +
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
+F+A+L ACSHAGL+D+ + M +Y + P EHY + D+LGRA + EA+EF+
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
M PT VW LL+ACR H E+ A+++ ++P N G V++SN +A RW D
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQE-GY 423
+R M+ GM+K P CSWIE+ K + F A DKSHP I E L E+ ++E+E GY
Sbjct: 810 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGY 869
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V DTK VLH+V+E +K +L+ HSER+AI +G++ TPD +RI KNLRVC DCHT K
Sbjct: 870 VADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKL 929
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+SK+ +R+I++RD +RFHHFE G CSCGD W
Sbjct: 930 VSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 148/249 (59%), Gaps = 1/249 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +D+V+WN++I G +N +Y+EAL M K D +++S++ +++ G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+H Y I+HG D+N+ +G++LI+MY+KC R F + KD ISW ++IAG QN
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
E L+ FR + +++ + SI+ A + L ++ + K++H I+R G D + I
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 524
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVK 240
+ L+D+Y KC N+ A +F+ + D+VSWT++I +AL+GN +A+ LF +M + G+
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 241 PNSVAFVAV 249
+SVA + +
Sbjct: 585 ADSVALLCI 593
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 137/253 (54%), Gaps = 5/253 (1%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D V WN+++ + +G E L + R+M P+S+T+ S L + GKEIH
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 65 GYAIR---HGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
++ H + VC ++LI MY +C ++ + R+ + D ++WNS+I G VQN
Sbjct: 308 ASVLKSSTHSSELYVC--NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
++ E L+FF M+ A K VS +SI+ A L+ L G +LH +I++G+D N+ + +
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
+L+DMY+KC F +M D++SWT VI G A + +A+ LF + K ++
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 242 NSVAFVAVLTACS 254
+ + ++L A S
Sbjct: 486 DEMILGSILRASS 498
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ L+ MY KC ++D+ ++F +P + A +WN++I V NG L + M +
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG 177
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ SF +++ ACA L + G +LH +++ G+ FI ++L+ MYAK ++ AR
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 237
Query: 198 CIFDKM-DLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHA 256
+FD + D V W +++ + G + + + LF +M G PNS V+ LTAC
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 257 GLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
S+ K + A+ + R GK+ +A + M+
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MP +WNT+I NG AL + M + + ++L A D+ G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVK-DAISWNSIIAGCVQ 119
E+H ++ G + I ++L++MYAK + + RLF K DA+ WNSI++
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNG-FDDNMF 178
+G E L+ FR+M + P + S + AC + LGK++H ++++ ++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++L+ MY +CG + A I +M+ D+V+W ++I G + +A+ F M G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 239 VKPNSVAFVAVLTA 252
K + V+ +++ A
Sbjct: 382 HKSDEVSMTSIIAA 395
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 85 MYAKCARVEDSHRLFCLLPVKDAISWNS-------IIAGCVQNGLFDEGL-KFFRQMLIA 136
MY+ A RL C +P + + N + + FD L + F+++ ++
Sbjct: 15 MYSASAISFPRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVS 74
Query: 137 KIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN--GFDDNMFIASSLLDMYAKCGNIR 194
+ +F+ ++ C + G+QLH I + F+ + F+A L+ MY KCG++
Sbjct: 75 ENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLD 133
Query: 195 LARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
A +FD+M +W +I +G A++L+ M +GV +F A+L AC
Sbjct: 134 DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC- 192
Query: 255 HAGLID-KAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENV 313
A L D ++ S +S+ G + A+ + + L A +
Sbjct: 193 -AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 314 WLTLLSA 320
W ++LS+
Sbjct: 252 WNSILSS 258
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/516 (39%), Positives = 308/516 (59%), Gaps = 2/516 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
+P +L +WN I +G EA+ + ++ P+S T + L +D++ + G
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
++HG +R G D +V + + LI+ Y KC ++ S +F + K+A+SW S++A VQN
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
++ + + ++ SS++ ACA + L LG+ +H ++ + +F+
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 181 SSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV- 239
S+L+DMY KCG I + FD+M ++V+ ++I G A G A++LFE+M G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 240 -KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
PN + FV++L+ACS AG ++ F+SM YGI P EHY+ + D+LGRAG ++ A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
YEFI M PT +VW L +ACR+H +L AE +F +DP + G +V+LSNT+AAA
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
RW +A ++R ++ G+KK SWI VKN+ +AF A D+SH I L +L M
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 419 EQEGYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCH 478
E GY PD K L+D+EEE+K + +HSE+LA+ FG++ P IRI KNLR+CGDCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 648
Query: 479 TAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ KF+S V+REIIVRDN+RFH F+DG CSC DYW
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 2 PVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGK 61
P ++VSW ++I GLA+NG + AL +M + P+ FT A + GK
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 62 EIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNG 121
+IH A++ G +V +G S +MY K +D+ +LF +P ++ +WN+ I+ V +G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 122 LFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIAS 181
E ++ F + P ++F + + AC+ L+LG QLHG ++R+GFD ++ + +
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 182 SLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKP 241
L+D Y KC IR + IF +M + VSW +++ + A L+ + KD V+
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 242 NSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEF 301
+ +VL+AC+ ++ S K + + +A+ D+ G+ G ++++ +
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 302 ISNMHAGPTENV 313
M P +N+
Sbjct: 368 FDEM---PEKNL 376
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 87/177 (49%)
Query: 78 IGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAK 137
+ + LINMY+K E + + L P ++ +SW S+I+G QNG F L F +M
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG 103
Query: 138 IKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLAR 197
+ P +F A A L GKQ+H ++ G ++F+ S DMY K AR
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163
Query: 198 CIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACS 254
+FD++ ++ +W A I + G +AI F + + PNS+ F A L ACS
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 156 TTLHLGKQLHGCIIRN-GFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAV 214
+++ LG+ +H I++ F+A+ L++MY+K + AR + ++VSWT++
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 215 IMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTA 252
I G A +G+ A+ F +M ++GV PN F A
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKA 117
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/517 (39%), Positives = 311/517 (60%), Gaps = 3/517 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQM--GNVNLKPDSFTLSSVLPIFADYVDVI 58
MP DLVSWN++I G + G + ++ +M V +P+ T S++
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 59 KGKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCV 118
+G+ IHG ++ G+ V + ++ IN Y K + S +LF L +K+ +SWN++I +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 119 QNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
QNGL ++GL +F +P +F +++ +C + + L + +HG I+ GF N
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
I ++LLD+Y+K G + + +F ++ D ++WTA++ A HG DAI FE M G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+ P+ V F +L ACSH+GL+++ YF +M+K Y I P +HY+ + DLLGR+G LQ+A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 299 YEFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAA 358
Y I M P+ VW LL ACRV+K+ +L K AE++F ++P + YV+LSN Y+A+
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 359 RRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERM 418
WKDA+ +R M+ KG+ + CS+IE NK + FV GD SHP +I + LKE+ ++M
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 419 EQE-GYVPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDC 477
+ E GY T+ VLHDV E+ K+ ++ HSE++A+ FG++ I I KNLR+CGDC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 478 HTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
H K IS I +R II+RD+ RFHHF DG CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 133/266 (50%), Gaps = 9/266 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K + + RHG IG L+ Y + + +LF +P +D +SWNS+I+G
Sbjct: 56 KVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 121 GLFDEGLKFFRQMLIAKI--KPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
G + + +M+I+++ +P V+F S++ AC + + G+ +HG +++ G + +
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ ++ ++ Y K G++ + +F+ + + ++VSW +I+ + +G A ++ F + G
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
+P+ F+AVL +C G++ A + + G + + A+ DL + G+L+++
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQG-IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 299 YEFISNMHAGPTENVWLTLLSACRVH 324
+ P W +L+A H
Sbjct: 290 STVFHEI-TSPDSMAWTAMLAAYATH 314
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 146 SSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDL 205
SS++ A ++ L + LH ++++ + FI L+ Y + G+ A +FD+M
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 206 HDIVSWTAVIMGNALHGNAHDAISLFEQM--EKDGVKPNSVAFVAVLTACSHAGLIDKAW 263
D+VSW ++I G + G + +M + G +PN V F+++++AC + G ++
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG- 153
Query: 264 SYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNM 305
+ + +G+ + A + G+ G L + + ++
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 305/510 (59%), Gaps = 10/510 (1%)
Query: 7 VSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGY 66
V +N +I G N +A + R+M + DS T+ ++P+ + G+ +HG
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 67 AIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEG 126
++ GLD+ V + +S I MY KC VE RLF +PVK I+WN++I+G QNGL +
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
L+ + QM + + P + S++ +CAHL +G ++ + NGF N+F++++ + M
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
YA+CGN+ AR +FD M + +VSWTA+I +HG + LF+ M K G++P+ F
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
V VL+ACSH+GL DK F +M ++Y + P EHY+ + DLLGRAG+L EA EFI +M
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P VW LL AC++HKNV++A K+ +PNN+G YV++SN Y+ ++ +
Sbjct: 422 VEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR 481
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKEL-LERMEQEGYVP 425
+RV MR + +K P S++E K + + F+AGD+SH ++ L EL ME G +
Sbjct: 482 IRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMD 541
Query: 426 -DTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFI 484
D E + E HSERLAI FGI+ + GT I +IKNLRVC DCH +K +
Sbjct: 542 CDRGEEVSSTTRE--------HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQV 593
Query: 485 SKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
SKIV R+ +VRD SRFH+F+DG CSC DYW
Sbjct: 594 SKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 3/292 (1%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WN + LA L+ E++++ R M PD+F+ +L A + G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAIS--WNSIIAGCVQNGLFDEG 126
+ G + + ++LI+MY KC V D+ ++F P +S +N++I+G N +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 127 LKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDM 186
FR+M + V+ ++P C L LG+ LHG ++ G D + + +S + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 187 YAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAF 246
Y KCG++ R +FD+M + +++W AVI G + +G A+D + L+EQM+ GV P+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 247 VAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEA 298
V+VL++C+H G K + + G P+ A + R G L +A
Sbjct: 261 VSVLSSCAHLG-AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
MPV L++WN VI G ++NGL + L + QM + + PD FTL SVL A G
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
E+ +G NV + ++ I+MYA+C + + +F ++PVK +SW ++I +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G+ + GL F M+ I+P F ++ AC+H G +L + R +
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
S L+D+ + G + A + M + D W A++ +H N A F ++ +
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 454
Query: 239 VKPNSVAFVAVLT 251
+PN++ + +++
Sbjct: 455 FEPNNIGYYVLMS 467
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/511 (39%), Positives = 318/511 (62%), Gaps = 4/511 (0%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D+V +IVG ++ G EA+ + M ++P+ +T +SVL + D+ GK IH
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
G ++ G ++ + +SL+ MY +C+ V+DS R+F + + +SW S+I+G VQNG +
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 125 EGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLL 184
L FR+M+ IKP + SS + C++L G+Q+HG + + GFD + + S L+
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLI 410
Query: 185 DMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSV 244
D+Y KCG +AR +FD + D++S +I A +G +A+ LFE+M G++PN V
Sbjct: 411 DLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 245 AFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISN 304
++VL AC+++ L+++ F+S KD I + +HYA + DLLGRAG+L+EA E ++
Sbjct: 471 TVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTT 528
Query: 305 MHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDA 364
P +W TLLSAC+VH+ VE+A ++ KI I+P + G +++SN YA+ +W
Sbjct: 529 EVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 365 ASLRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDK-SHPFYHRINEALKELLERMEQEGY 423
++ M++ +KK PA SW+E+ + + F+AGD SHP +I E L+EL+++ + GY
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGY 648
Query: 424 VPDTKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKF 483
V D V D+EE K+ L+ HSE+LAI F + G +IRI+KNLRVC DCH+ IK
Sbjct: 649 VEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKI 707
Query: 484 ISKIVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+S++++REII RD+ RFHHF DG CSCGDYW
Sbjct: 708 VSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 161/294 (54%), Gaps = 2/294 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M +V+WN++I L ++ +EA+ + R M N+ PD +TLSSV F+D +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 61 KEIHGYAIRHGLD-ANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
+ HG A+ GL+ +NV +GS+L++MY K + ++ + + KD + ++I G Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 120 NGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFI 179
G E +K F+ ML+ K++P +++S++ +C +L + GK +HG ++++GF+ +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
+SLL MY +C + + +F ++ + VSWT++I G +G A+ F +M +D +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAG 293
KPNS + L CS+ + ++ +TK YG + + DL G+ G
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCG 417
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 147/311 (47%), Gaps = 12/311 (3%)
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K I + ++ G A + GS L++ KC ++ + ++F + + ++WNS+IA +++
Sbjct: 85 KTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFD-DNMFI 179
E ++ +R M+ + P + SS+ A + L+ ++ HG + G + N+F+
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGV 239
S+L+DMY K G R A+ + D+++ D+V TA+I+G + G +A+ F+ M + V
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 240 KPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDYGIAPSFEHYAAVADLLGRAGKLQEAY 299
+PN + +VL +C + I M K G + ++ + R + ++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSL 322
Query: 300 EFISNMHAGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAAR 359
+ P + W +L+S L E++ +I+ M I N++ +
Sbjct: 323 RVFKCIEY-PNQVSWTSLISG--------LVQNGREEMALIEFRKMMRDSIKPNSFTLSS 373
Query: 360 RWKDAASLRVF 370
+ ++L +F
Sbjct: 374 ALRGCSNLAMF 384
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/508 (39%), Positives = 310/508 (61%), Gaps = 2/508 (0%)
Query: 9 WNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAI 68
WNT+ G RN L E+L + ++M ++ ++PD FT V+ + D G +H + +
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 69 RHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLK 128
++G + + L+ MY K + + LF + VKD ++WN+ +A CVQ G L+
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 129 FFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYA 188
+F +M ++ + S++ AC L +L +G++++ + D N+ + ++ LDM+
Sbjct: 197 YFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHL 256
Query: 189 KCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVA 248
KCGN AR +F++M ++VSW+ +I+G A++G++ +A++LF M+ +G++PN V F+
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 249 VLTACSHAGLIDKAWSYFNSMTK--DYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMH 306
VL+ACSHAGL+++ YF+ M + D + P EHYA + DLLGR+G L+EAYEFI M
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 307 AGPTENVWLTLLSACRVHKNVELAGKVAEKIFMIDPNNMGAYVILSNTYAAARRWKDAAS 366
P +W LL AC VH+++ L KVA+ + P+ +V+LSN YAAA +W
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Query: 367 LRVFMRNKGMKKTPACSWIEVKNKAYAFVAGDKSHPFYHRINEALKELLERMEQEGYVPD 426
+R MR G KK A S +E + K + F GDKSHP I E L E+L+++ + GYVPD
Sbjct: 437 VRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD 496
Query: 427 TKEVLHDVEEEQKKNLLYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISK 486
T V HDVE E+K+ L +HSE+LAI FG+I G IR++KNLR C DCH KF+S
Sbjct: 497 TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSS 556
Query: 487 IVQREIIVRDNSRFHHFEDGKCSCGDYW 514
+ EII+RD +RFHHF +G CSC ++W
Sbjct: 557 LTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M V DLV+WN + + G AL +M ++ DSFT+ S+L + G
Sbjct: 170 MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIG 229
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
+EI+ A + +D N+ + ++ ++M+ KC E + LF + ++ +SW+++I G N
Sbjct: 230 EEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMN 289
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIA 180
G E L F M ++P +V+F ++ AC+H ++ GK+ ++++ D N+
Sbjct: 290 GDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN-DKNLEPR 348
Query: 181 ----SSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALH 221
+ ++D+ + G + A KM + D W A++ A+H
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALH 221
K++H ++R GF + + + LL+ G++ AR +FD+M I W + G +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 222 GNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAG 257
+++ L+++M GV+P+ + V+ A S G
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 325/552 (58%), Gaps = 41/552 (7%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVN-LKPDSFTLSSVLPIFADYVDVIK 59
MP D ++W +V+ L + L + L++ +G+ + L+PD F S+++ A+ +
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCA----------------------------- 90
G+++H + I + + SSL++MYAKC
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 91 --RVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKIKPRH-VSFSS 147
R E++ LF +LPVK+ SW ++I+G VQ+G E F +M ++ + SS
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 148 IMPACAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHD 207
I+ ACA+L G+Q+HG +I GFD +FI+++L+DMYAKC ++ A+ IF +M D
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 208 IVSWTAVIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFN 267
+VSWT++I+G A HG A A++L++ M GVKPN V FV ++ ACSH G ++K F
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 268 SMTKDYGIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNV 327
SMTKDYGI PS +HY + DLLGR+G L EA I M P E W LLSAC+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 328 ELAGKVAEKIF----MIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACS 383
++ ++A+ + + DP+ Y++LSN YA+A W + R + ++K P S
Sbjct: 424 QMGIRIADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Query: 384 WIEVKNKAYAFVAGDKSHPFYHRINEALKELLERME-QEGYVPDTKEVLHDVEEEQKKNL 442
+EV+ + F AG+ SHP I LK+L E M + GYVPDT +LHD++E++K+ L
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540
Query: 443 LYYHSERLAIVFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHH 502
L++HSER A+ +G++ GT IRI+KNLRVCGDCH +K IS+I +REIIVRD +R+HH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600
Query: 503 FEDGKCSCGDYW 514
F+ GKCSC D+W
Sbjct: 601 FKGGKCSCNDFW 612
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 60 GKEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQ 119
K +H + ++ G+ + ++L+N+Y KC + ++F +P +D I+W S++ Q
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 120 NGLFDEGL-KFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDDNMF 178
L + L F + ++P FS+++ ACA+L ++ G+Q+H I + + ++
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 179 IASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLFEQMEKDG 238
+ SSL+DMYAKCG + A+ +FD + + + +SWTA++ G A G +A+ LF +
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP--- 198
Query: 239 VKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKD 272
VK N ++ A+++ +G +A+S F M ++
Sbjct: 199 VK-NLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 152 CAHLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSW 211
CA TL K LH I++ G +A++L+++Y KCG A +FD+M D ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 212 TAVIMG-NALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLID 260
+V+ N + + G++P+ F A++ AC++ G ID
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/542 (38%), Positives = 313/542 (57%), Gaps = 32/542 (5%)
Query: 5 DLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKGKEIH 64
D WN +I G + + E +L + ++M + +++T S+L ++ + +IH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 65 GYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFD 124
+ G + +V +SLIN YA + +H LF +P D +SWNS+I G V+ G D
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 125 -------------------------------EGLKFFRQMLIAKIKPRHVSFSSIMPACA 153
E L+ F +M + ++P +VS ++ + ACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 154 HLTTLHLGKQLHGCIIRNGFDDNMFIASSLLDMYAKCGNIRLARCIFDKMDLHDIVSWTA 213
L L GK +H + + + + L+DMYAKCG + A +F + + +WTA
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 214 VIMGNALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTKDY 273
+I G A HG+ +AIS F +M+K G+KPN + F AVLTACS+ GL+++ F SM +DY
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 274 GIAPSFEHYAAVADLLGRAGKLQEAYEFISNMHAGPTENVWLTLLSACRVHKNVELAGKV 333
+ P+ EHY + DLLGRAG L EA FI M P +W LL ACR+HKN+EL ++
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 334 AEKIFMIDPNNMGAYVILSNTYAAARRWKDAASLRVFMRNKGMKKTPACSWIEVKNKAYA 393
E + IDP + G YV +N +A ++W AA R M+ +G+ K P CS I ++ +
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 394 FVAGDKSHPFYHRINEALKELLERMEQEGYVPDTKEVLHD-VEEEQKKNLLYYHSERLAI 452
F+AGD+SHP +I + + ++E+ GYVP+ +E+L D V++++++ +++ HSE+LAI
Sbjct: 499 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAI 558
Query: 453 VFGIICTPDGTTIRIIKNLRVCGDCHTAIKFISKIVQREIIVRDNSRFHHFEDGKCSCGD 512
+G+I T GT IRI+KNLRVC DCH K ISKI +R+I++RD +RFHHF DGKCSCGD
Sbjct: 559 TYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 618
Query: 513 YW 514
YW
Sbjct: 619 YW 620
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 1 MPVSDLVSWNTVIVGLARNGLYEEALNIVRQMGNVNLKPDSFTLSSVLPIFADYVDVIKG 60
M + +SW T+I G + + +EAL + +M N +++PD+ +L++ L A + +G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 61 KEIHGYAIRHGLDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIAGCVQN 120
K IH Y + + + +G LI+MYAKC +E++ +F + K +W ++I+G +
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 121 GLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN-GFDDNMFI 179
G E + F +M IKP ++F++++ AC++ + GK + + R+ +
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 180 ASSLLDMYAKCGNIRLARCIFDKMDLH-DIVSWTAVIMGNALHGN 223
++D+ + G + A+ +M L + V W A++ +H N
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 162 KQLHGCIIRNGFDDNMFIASSLLDMYAKCGN---IRLARCIFDKMDLHDIVSWTAVIMGN 218
KQ+H +++ G + + + L + + A+ +FD D D W +I G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 219 ALHGNAHDAISLFEQMEKDGVKPNSVAFVAVLTACSHAGLIDKAWSYFNSMTK 271
+ ++ L+++M N+ F ++L ACS+ ++ +TK
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK 143
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,827,735
Number of Sequences: 539616
Number of extensions: 8043259
Number of successful extensions: 32551
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 26730
Number of HSP's gapped (non-prelim): 2198
length of query: 514
length of database: 191,569,459
effective HSP length: 122
effective length of query: 392
effective length of database: 125,736,307
effective search space: 49288632344
effective search space used: 49288632344
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)